Query 037368
Match_columns 823
No_of_seqs 299 out of 1769
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 19:46:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xi4_A Clathrin heavy chain; a 100.0 1.8E-26 6.3E-31 276.9 45.0 537 134-788 69-704 (1630)
2 3ow8_A WD repeat-containing pr 99.9 2.1E-24 7.1E-29 233.6 33.2 269 25-332 32-320 (321)
3 1vyh_C Platelet-activating fac 99.9 1E-24 3.5E-29 244.4 31.2 266 26-330 109-408 (410)
4 2ynn_A Coatomer subunit beta'; 99.9 1.7E-23 5.9E-28 224.3 35.4 266 26-328 14-298 (304)
5 4ery_A WD repeat-containing pr 99.9 7.1E-23 2.4E-27 219.8 33.9 268 26-331 24-310 (312)
6 3frx_A Guanine nucleotide-bind 99.9 1.6E-22 5.6E-27 218.3 33.7 266 27-331 19-315 (319)
7 1got_B GT-beta; complex (GTP-b 99.9 2.6E-22 9E-27 218.7 34.9 268 26-329 56-339 (340)
8 4gqb_B Methylosome protein 50; 99.9 1E-22 3.4E-27 222.6 30.6 234 25-297 82-334 (344)
9 3mkq_A Coatomer beta'-subunit; 99.9 1.8E-20 6.2E-25 228.2 51.5 155 25-211 13-172 (814)
10 2pbi_B Guanine nucleotide-bind 99.9 1E-21 3.6E-26 215.3 34.9 273 26-329 65-353 (354)
11 1vyh_C Platelet-activating fac 99.9 2.7E-22 9.2E-27 224.7 28.6 230 26-292 151-409 (410)
12 2hes_X YDR267CP; beta-propelle 99.9 7.9E-22 2.7E-26 214.0 31.5 279 26-331 15-326 (330)
13 2xzm_R RACK1; ribosome, transl 99.9 1.2E-21 4.1E-26 213.7 32.9 265 26-330 22-337 (343)
14 3ow8_A WD repeat-containing pr 99.9 4.4E-22 1.5E-26 215.3 28.8 227 27-292 82-319 (321)
15 3fm0_A Protein CIAO1; WDR39,SG 99.9 1E-21 3.5E-26 214.5 31.6 277 27-336 18-338 (345)
16 2ynn_A Coatomer subunit beta'; 99.9 1.9E-21 6.6E-26 208.3 32.4 241 54-332 3-258 (304)
17 4e54_B DNA damage-binding prot 99.9 3.5E-22 1.2E-26 225.4 27.6 274 26-331 120-428 (435)
18 2ymu_A WD-40 repeat protein; u 99.9 2.5E-21 8.6E-26 226.0 34.4 261 26-329 304-576 (577)
19 3iz6_a 40S ribosomal protein R 99.9 7.8E-22 2.7E-26 218.5 27.8 276 26-332 67-374 (380)
20 4g56_B MGC81050 protein; prote 99.9 1.8E-21 6.2E-26 213.7 30.4 280 27-340 44-350 (357)
21 2xzm_R RACK1; ribosome, transl 99.9 2E-21 6.8E-26 211.9 30.4 229 27-294 78-340 (343)
22 3dm0_A Maltose-binding peripla 99.9 4.1E-21 1.4E-25 230.1 35.5 267 26-331 383-691 (694)
23 3dw8_B Serine/threonine-protei 99.9 7E-21 2.4E-25 214.5 35.0 299 2-330 10-444 (447)
24 4gqb_B Methylosome protein 50; 99.9 4.1E-21 1.4E-25 209.7 32.0 273 26-333 31-331 (344)
25 3frx_A Guanine nucleotide-bind 99.9 2.5E-21 8.4E-26 209.1 29.1 227 27-294 67-317 (319)
26 1erj_A Transcriptional repress 99.9 4.8E-21 1.7E-25 213.1 30.8 227 28-293 126-388 (393)
27 2pm7_B Protein transport prote 99.9 5.3E-21 1.8E-25 204.1 29.8 236 26-293 10-284 (297)
28 2hes_X YDR267CP; beta-propelle 99.9 4.8E-21 1.7E-25 207.8 29.5 238 27-294 60-328 (330)
29 3v7d_B Cell division control p 99.9 1.3E-20 4.5E-25 213.8 34.4 267 28-332 125-420 (464)
30 3zwl_B Eukaryotic translation 99.9 3.6E-20 1.2E-24 202.1 36.5 279 26-334 33-347 (369)
31 2ymu_A WD-40 repeat protein; u 99.9 1.4E-20 4.8E-25 219.6 34.8 263 26-331 263-537 (577)
32 1k8k_C P40, ARP2/3 complex 41 99.9 9.3E-21 3.2E-25 207.6 31.0 235 25-294 8-274 (372)
33 4g56_B MGC81050 protein; prote 99.9 3.3E-21 1.1E-25 211.7 27.3 231 25-294 94-343 (357)
34 1nr0_A Actin interacting prote 99.9 1.1E-20 3.9E-25 222.8 33.2 272 27-331 149-520 (611)
35 3vl1_A 26S proteasome regulato 99.9 9.2E-21 3.1E-25 211.8 30.7 223 34-294 108-365 (420)
36 4aez_A CDC20, WD repeat-contai 99.9 3.7E-20 1.3E-24 206.4 34.6 275 28-340 96-387 (401)
37 1erj_A Transcriptional repress 99.9 4.3E-20 1.5E-24 205.5 34.3 264 26-330 65-386 (393)
38 4aow_A Guanine nucleotide-bind 99.9 4.5E-20 1.5E-24 199.4 33.4 269 27-332 40-336 (340)
39 3fm0_A Protein CIAO1; WDR39,SG 99.9 2.3E-20 7.9E-25 203.8 30.9 238 26-297 62-338 (345)
40 3odt_A Protein DOA1; ubiquitin 99.9 1E-19 3.6E-24 193.9 34.7 266 26-333 19-296 (313)
41 1nr0_A Actin interacting prote 99.9 2.7E-20 9.2E-25 219.6 32.6 226 32-296 26-272 (611)
42 1got_B GT-beta; complex (GTP-b 99.9 7.3E-20 2.5E-24 199.3 32.3 242 54-331 45-299 (340)
43 4ery_A WD repeat-containing pr 99.9 6.8E-20 2.3E-24 196.5 30.7 232 26-293 66-311 (312)
44 3bg1_A Protein SEC13 homolog; 99.9 1.3E-20 4.3E-25 203.2 24.4 234 26-293 14-292 (316)
45 3ei3_B DNA damage-binding prot 99.9 4.9E-20 1.7E-24 203.5 29.8 274 26-332 74-381 (383)
46 1gxr_A ESG1, transducin-like e 99.9 2E-19 6.9E-24 193.7 33.4 265 25-329 51-333 (337)
47 1sq9_A Antiviral protein SKI8; 99.9 1.1E-19 3.6E-24 201.4 31.9 250 25-298 16-326 (397)
48 1r5m_A SIR4-interacting protei 99.9 8.8E-20 3E-24 203.1 28.5 269 27-330 110-422 (425)
49 2pm9_A Protein WEB1, protein t 99.9 8.6E-21 3E-25 211.4 20.3 243 25-295 67-338 (416)
50 3dm0_A Maltose-binding peripla 99.9 9.2E-20 3.1E-24 218.4 30.5 230 27-293 432-692 (694)
51 3k26_A Polycomb protein EED; W 99.9 1.6E-19 5.6E-24 196.8 29.7 266 25-330 18-363 (366)
52 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-19 8.5E-24 202.0 31.6 264 26-333 134-414 (435)
53 3k26_A Polycomb protein EED; W 99.9 1.1E-19 3.6E-24 198.3 27.7 234 26-293 70-365 (366)
54 2pbi_B Guanine nucleotide-bind 99.9 1.3E-19 4.6E-24 198.5 28.0 226 27-291 108-354 (354)
55 2pm7_B Protein transport prote 99.9 2.5E-19 8.4E-24 191.2 29.4 242 58-333 3-285 (297)
56 1r5m_A SIR4-interacting protei 99.9 6E-19 2E-23 196.3 33.6 266 26-331 46-359 (425)
57 3vl1_A 26S proteasome regulato 99.8 2.7E-19 9.3E-24 199.8 30.6 259 34-332 67-364 (420)
58 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.2E-18 4.3E-23 196.7 36.1 258 28-331 122-389 (445)
59 3jrp_A Fusion protein of prote 99.8 1.6E-19 5.5E-24 197.9 27.7 235 26-294 12-287 (379)
60 3dwl_C Actin-related protein 2 99.8 3.9E-20 1.3E-24 203.6 22.6 233 26-293 12-280 (377)
61 4a11_B DNA excision repair pro 99.8 1.3E-18 4.4E-23 192.7 33.2 275 25-337 43-369 (408)
62 4gga_A P55CDC, cell division c 99.8 1.6E-18 5.4E-23 194.4 34.2 265 29-330 109-392 (420)
63 3f3f_A Nucleoporin SEH1; struc 99.8 3.9E-19 1.3E-23 191.5 27.8 207 26-252 12-249 (351)
64 1gxr_A ESG1, transducin-like e 99.8 9.1E-19 3.1E-23 188.5 30.5 227 25-292 97-335 (337)
65 2pm9_A Protein WEB1, protein t 99.8 1.4E-19 4.9E-24 201.5 24.7 276 26-332 13-336 (416)
66 3sfz_A APAF-1, apoptotic pepti 99.8 9.2E-19 3.2E-23 223.5 35.2 267 26-330 616-910 (1249)
67 3v7d_B Cell division control p 99.8 2.9E-18 9.8E-23 194.5 35.0 271 26-329 163-459 (464)
68 4aez_A CDC20, WD repeat-contai 99.8 6.2E-19 2.1E-23 196.4 28.8 233 25-297 134-383 (401)
69 3dwl_C Actin-related protein 2 99.8 1.5E-19 5E-24 199.0 23.3 201 26-251 56-280 (377)
70 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3.4E-18 1.2E-22 193.1 34.3 252 26-322 160-427 (445)
71 1k8k_C P40, ARP2/3 complex 41 99.8 1.1E-18 3.8E-23 190.9 29.2 201 26-252 53-274 (372)
72 1yfq_A Cell cycle arrest prote 99.8 1.8E-18 6.3E-23 187.0 30.2 260 26-321 12-311 (342)
73 2aq5_A Coronin-1A; WD40 repeat 99.8 6.6E-19 2.2E-23 196.1 26.2 236 26-297 82-345 (402)
74 3iz6_a 40S ribosomal protein R 99.8 3.1E-19 1.1E-23 197.5 23.4 235 27-295 110-376 (380)
75 3mmy_A MRNA export factor; mRN 99.8 3.8E-18 1.3E-22 185.9 31.3 257 25-322 39-335 (368)
76 4aow_A Guanine nucleotide-bind 99.8 1.4E-18 4.8E-23 187.6 27.7 257 39-329 8-282 (340)
77 3ei3_B DNA damage-binding prot 99.8 1.6E-18 5.5E-23 191.3 28.6 231 25-294 118-382 (383)
78 2vdu_B TRNA (guanine-N(7)-)-me 99.8 6.7E-18 2.3E-22 191.2 34.1 236 27-292 6-337 (450)
79 2xyi_A Probable histone-bindin 99.8 1.1E-18 3.7E-23 196.6 27.4 242 25-295 128-411 (430)
80 4ggc_A P55CDC, cell division c 99.8 8.3E-18 2.8E-22 179.7 32.8 264 29-330 29-312 (318)
81 3i2n_A WD repeat-containing pr 99.8 7.5E-19 2.6E-23 191.0 24.8 236 25-294 65-353 (357)
82 3bg1_A Protein SEC13 homolog; 99.8 6.8E-19 2.3E-23 189.6 23.7 241 59-332 8-292 (316)
83 3lrv_A PRE-mRNA-splicing facto 99.8 1.1E-18 3.6E-23 190.2 25.4 229 34-294 47-292 (343)
84 1sq9_A Antiviral protein SKI8; 99.8 7.8E-19 2.7E-23 194.3 24.7 238 25-295 62-396 (397)
85 1pgu_A Actin interacting prote 99.8 3.5E-18 1.2E-22 200.4 31.5 270 25-329 18-324 (615)
86 3i2n_A WD repeat-containing pr 99.8 3.6E-18 1.2E-22 185.6 29.2 269 25-331 18-351 (357)
87 2j04_A TAU60, YPL007P, hypothe 99.8 3E-19 1E-23 201.6 20.9 250 26-332 16-296 (588)
88 3gre_A Serine/threonine-protei 99.8 1.9E-18 6.7E-23 194.3 27.5 239 26-295 64-360 (437)
89 2aq5_A Coronin-1A; WD40 repeat 99.8 1.6E-18 5.5E-23 193.0 26.0 238 29-296 38-301 (402)
90 2j04_B YDR362CP, TAU91; beta p 99.8 2E-19 6.7E-24 207.1 18.9 232 26-296 267-519 (524)
91 3jro_A Fusion protein of prote 99.8 1.3E-18 4.3E-23 210.3 26.4 235 26-293 10-284 (753)
92 3lrv_A PRE-mRNA-splicing facto 99.8 1.4E-18 4.7E-23 189.3 23.5 193 28-254 79-294 (343)
93 3jrp_A Fusion protein of prote 99.8 4.6E-18 1.6E-22 186.2 27.2 243 54-331 1-285 (379)
94 1p22_A F-BOX/WD-repeat protein 99.8 4.7E-18 1.6E-22 191.4 26.5 230 26-297 174-417 (435)
95 4h5i_A Guanine nucleotide-exch 99.8 2.7E-18 9.2E-23 189.0 23.4 195 28-252 136-343 (365)
96 3odt_A Protein DOA1; ubiquitin 99.8 1.8E-17 6.1E-22 176.5 29.0 227 25-296 59-298 (313)
97 3zwl_B Eukaryotic translation 99.8 1.6E-17 5.4E-22 181.0 28.7 244 25-296 74-348 (369)
98 2j04_B YDR362CP, TAU91; beta p 99.8 7.8E-18 2.7E-22 193.7 26.9 193 26-252 208-428 (524)
99 3mkq_A Coatomer beta'-subunit; 99.8 1.5E-17 5.2E-22 202.3 30.8 238 54-329 3-255 (814)
100 3sfz_A APAF-1, apoptotic pepti 99.8 1.5E-17 5.1E-22 212.3 31.7 230 26-293 658-912 (1249)
101 4gga_A P55CDC, cell division c 99.8 2.4E-17 8.1E-22 184.9 29.6 233 26-294 148-395 (420)
102 4h5i_A Guanine nucleotide-exch 99.8 4.6E-18 1.6E-22 187.1 21.6 229 26-294 74-343 (365)
103 1bpo_A Protein (clathrin); cla 99.8 1.7E-15 5.7E-20 162.0 38.8 343 133-498 68-494 (494)
104 2oaj_A Protein SNI1; WD40 repe 99.8 2.2E-17 7.4E-22 202.9 28.1 264 36-329 448-825 (902)
105 3dw8_B Serine/threonine-protei 99.8 2.3E-17 7.7E-22 185.7 24.0 200 26-252 94-373 (447)
106 1pgu_A Actin interacting prote 99.8 1.6E-16 5.4E-21 186.3 31.6 235 25-297 63-331 (615)
107 2xyi_A Probable histone-bindin 99.8 2.7E-16 9.2E-21 176.9 30.6 253 58-333 122-410 (430)
108 3f3f_A Nucleoporin SEH1; struc 99.8 3E-16 1E-20 168.8 29.7 207 59-294 6-249 (351)
109 4ggc_A P55CDC, cell division c 99.8 2.9E-16 1E-20 167.6 29.3 232 27-294 69-315 (318)
110 2oaj_A Protein SNI1; WD40 repe 99.7 9.9E-17 3.4E-21 197.0 27.8 191 25-252 17-242 (902)
111 3gre_A Serine/threonine-protei 99.7 8.4E-17 2.9E-21 180.9 24.5 196 25-252 111-359 (437)
112 2j04_A TAU60, YPL007P, hypothe 99.7 4.5E-17 1.5E-21 183.9 21.4 211 43-293 65-296 (588)
113 4a11_B DNA excision repair pro 99.7 6.6E-16 2.3E-20 170.8 30.0 234 25-297 99-368 (408)
114 3jro_A Fusion protein of prote 99.7 4.9E-17 1.7E-21 196.4 22.0 240 58-332 3-284 (753)
115 4gq1_A NUP37; propeller, trans 99.7 5.1E-17 1.7E-21 180.6 20.3 243 36-329 102-386 (393)
116 4e54_B DNA damage-binding prot 99.7 1E-16 3.5E-21 180.6 22.4 203 54-295 109-328 (435)
117 1yfq_A Cell cycle arrest prote 99.7 3.4E-16 1.2E-20 169.1 24.1 229 25-279 56-313 (342)
118 2vdu_B TRNA (guanine-N(7)-)-me 99.7 1.2E-15 4.1E-20 172.5 28.7 219 27-276 104-370 (450)
119 1l0q_A Surface layer protein; 99.7 5.6E-15 1.9E-19 163.1 33.2 255 37-330 4-272 (391)
120 3bws_A Protein LP49; two-domai 99.7 1.4E-15 4.7E-20 170.5 28.7 267 27-329 124-428 (433)
121 3mmy_A MRNA export factor; mRN 99.7 2.7E-15 9.3E-20 163.1 28.2 242 52-332 27-303 (368)
122 2w18_A PALB2, fancn, partner a 99.7 2.2E-15 7.4E-20 160.2 24.5 178 43-250 155-355 (356)
123 1l0q_A Surface layer protein; 99.7 1.6E-14 5.3E-19 159.5 30.8 233 24-298 30-279 (391)
124 3bws_A Protein LP49; two-domai 99.7 4.9E-15 1.7E-19 165.9 25.2 228 27-294 171-432 (433)
125 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.6E-14 5.6E-19 161.6 28.0 227 35-297 143-390 (415)
126 4gq1_A NUP37; propeller, trans 99.6 4.5E-15 1.5E-19 164.9 20.0 211 27-252 138-389 (393)
127 3vu4_A KMHSV2; beta-propeller 99.6 2.5E-14 8.4E-19 156.6 25.5 194 25-252 19-271 (355)
128 3vu4_A KMHSV2; beta-propeller 99.6 2.3E-14 7.9E-19 156.8 23.5 232 53-332 8-270 (355)
129 2hqs_A Protein TOLB; TOLB, PAL 99.6 1.5E-13 5.1E-18 153.8 27.3 252 36-320 76-371 (415)
130 2w18_A PALB2, fancn, partner a 99.6 2.3E-13 7.9E-18 144.6 24.7 214 38-292 57-355 (356)
131 1xi4_A Clathrin heavy chain; a 99.6 1.1E-12 3.6E-17 158.8 33.1 387 333-814 1052-1465(1630)
132 1nir_A Nitrite reductase; hemo 99.6 1.3E-12 4.5E-17 151.2 31.0 249 36-321 150-439 (543)
133 2ojh_A Uncharacterized protein 99.5 4.9E-13 1.7E-17 140.1 23.8 223 40-295 17-259 (297)
134 3u4y_A Uncharacterized protein 99.5 5.2E-12 1.8E-16 135.7 31.6 224 35-297 9-255 (331)
135 1ri6_A Putative isomerase YBHE 99.5 3.5E-12 1.2E-16 137.1 28.4 225 36-293 5-261 (343)
136 1b89_A Protein (clathrin heavy 99.5 6.2E-13 2.1E-17 145.7 17.9 373 337-814 9-392 (449)
137 1pby_B Quinohemoprotein amine 99.5 6E-12 2.1E-16 135.0 24.3 227 36-298 2-314 (337)
138 3u4y_A Uncharacterized protein 99.4 2.9E-11 1E-15 129.8 28.5 236 28-302 43-312 (331)
139 3vgz_A Uncharacterized protein 99.4 7E-11 2.4E-15 127.7 31.6 261 27-322 42-334 (353)
140 2oit_A Nucleoporin 214KDA; NH2 99.4 6.2E-13 2.1E-17 149.6 15.7 201 27-253 38-279 (434)
141 1xfd_A DIP, dipeptidyl aminope 99.4 1.3E-12 4.6E-17 156.5 19.1 271 29-322 21-380 (723)
142 2ojh_A Uncharacterized protein 99.4 6.3E-12 2.1E-16 131.6 20.8 223 25-279 41-292 (297)
143 2ecf_A Dipeptidyl peptidase IV 99.4 1.6E-11 5.6E-16 147.5 25.5 193 25-252 36-321 (741)
144 1jmx_B Amine dehydrogenase; ox 99.4 3.5E-11 1.2E-15 129.8 24.3 229 35-299 11-330 (349)
145 3hfq_A Uncharacterized protein 99.4 6.8E-11 2.3E-15 128.1 26.6 236 32-297 47-322 (347)
146 2oit_A Nucleoporin 214KDA; NH2 99.4 6.5E-12 2.2E-16 141.2 17.0 153 26-212 93-279 (434)
147 3hfq_A Uncharacterized protein 99.4 2.1E-10 7.2E-15 124.2 28.4 256 37-329 4-313 (347)
148 1k32_A Tricorn protease; prote 99.3 2E-10 6.8E-15 143.7 28.9 174 27-238 297-486 (1045)
149 2z3z_A Dipeptidyl aminopeptida 99.3 8E-11 2.7E-15 140.7 24.2 269 26-320 82-418 (706)
150 1ri6_A Putative isomerase YBHE 99.3 2.5E-10 8.6E-15 122.5 25.8 234 27-296 39-312 (343)
151 1z68_A Fibroblast activation p 99.3 7.9E-11 2.7E-15 141.2 23.2 232 28-296 19-348 (719)
152 2ecf_A Dipeptidyl peptidase IV 99.3 8.6E-11 2.9E-15 141.3 22.6 233 64-323 36-357 (741)
153 1nir_A Nitrite reductase; hemo 99.3 2.9E-09 1E-13 123.0 31.3 234 35-300 237-520 (543)
154 3scy_A Hypothetical bacterial 99.2 1.2E-08 4.1E-13 110.9 32.2 266 36-332 14-336 (361)
155 1k32_A Tricorn protease; prote 99.2 6.9E-10 2.4E-14 138.8 24.5 260 27-321 205-490 (1045)
156 1xfd_A DIP, dipeptidyl aminope 99.2 5.6E-10 1.9E-14 133.6 21.8 233 28-293 63-392 (723)
157 2z3z_A Dipeptidyl aminopeptida 99.2 1.2E-09 4.1E-14 130.5 24.4 241 32-296 128-437 (706)
158 3vgz_A Uncharacterized protein 99.2 4.5E-09 1.5E-13 113.3 25.3 235 62-328 38-299 (353)
159 4a5s_A Dipeptidyl peptidase 4 99.2 3.4E-09 1.2E-13 127.4 26.3 266 29-322 21-383 (740)
160 3o4h_A Acylamino-acid-releasin 99.1 2.4E-09 8.2E-14 124.9 23.8 230 27-297 23-278 (582)
161 3pe7_A Oligogalacturonate lyas 99.1 4.4E-09 1.5E-13 115.4 22.7 228 35-297 47-332 (388)
162 3e5z_A Putative gluconolactona 99.1 1.2E-08 4.1E-13 107.8 24.9 223 37-297 42-289 (296)
163 3scy_A Hypothetical bacterial 99.1 2.9E-08 1E-12 107.9 27.7 237 35-299 61-344 (361)
164 3lvg_A Clathrin heavy chain 1; 99.1 1.5E-13 5.2E-18 147.4 -15.0 370 337-813 31-413 (624)
165 1q7f_A NHL, brain tumor CG1071 99.1 4.5E-08 1.5E-12 102.6 27.0 225 28-294 32-280 (286)
166 1pby_B Quinohemoprotein amine 99.1 8.6E-09 2.9E-13 110.1 21.5 185 33-252 42-310 (337)
167 1jmx_B Amine dehydrogenase; ox 99.1 1.4E-08 4.9E-13 109.1 23.2 148 70-251 5-174 (349)
168 1q7f_A NHL, brain tumor CG1071 99.0 2.6E-08 8.8E-13 104.5 24.2 191 27-252 78-280 (286)
169 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.1E-08 7.2E-13 109.5 24.4 238 27-297 41-344 (365)
170 4a5s_A Dipeptidyl peptidase 4 99.0 3.8E-08 1.3E-12 118.2 27.7 233 33-295 70-401 (740)
171 3azo_A Aminopeptidase; POP fam 99.0 9.9E-08 3.4E-12 112.9 27.8 198 26-251 24-273 (662)
172 2z2n_A Virginiamycin B lyase; 99.0 7.9E-07 2.7E-11 93.1 31.7 265 26-332 15-295 (299)
173 1z68_A Fibroblast activation p 98.9 1.9E-08 6.5E-13 120.3 20.6 231 28-293 62-390 (719)
174 1jof_A Carboxy-CIS,CIS-muconat 98.9 1.3E-07 4.5E-12 103.2 24.3 184 43-253 117-342 (365)
175 3o4h_A Acylamino-acid-releasin 98.9 6.4E-08 2.2E-12 112.8 22.6 222 27-294 66-315 (582)
176 2dg1_A DRP35, lactonase; beta 98.8 5.1E-07 1.7E-11 96.7 25.6 259 28-329 8-313 (333)
177 3lvg_A Clathrin heavy chain 1; 98.8 2E-10 6.8E-15 123.6 -2.2 374 340-818 180-565 (624)
178 3dsm_A Uncharacterized protein 98.8 1.3E-06 4.4E-11 93.8 27.8 239 28-298 46-306 (328)
179 3azo_A Aminopeptidase; POP fam 98.8 2E-07 6.8E-12 110.2 22.8 242 35-296 90-371 (662)
180 3fvz_A Peptidyl-glycine alpha- 98.8 1.3E-06 4.3E-11 93.9 26.8 239 65-329 24-319 (329)
181 3pe7_A Oligogalacturonate lyas 98.8 1.9E-07 6.4E-12 102.2 20.6 197 31-253 87-330 (388)
182 3fvz_A Peptidyl-glycine alpha- 98.8 9.6E-07 3.3E-11 94.8 25.5 216 45-294 69-322 (329)
183 2dg1_A DRP35, lactonase; beta 98.8 5.5E-07 1.9E-11 96.4 23.6 194 28-253 47-264 (333)
184 3e5z_A Putative gluconolactona 98.7 3.3E-06 1.1E-10 88.8 27.1 229 57-332 20-286 (296)
185 2qc5_A Streptogramin B lactona 98.7 7.1E-06 2.4E-10 85.7 28.9 261 26-330 20-298 (300)
186 2oiz_A Aromatic amine dehydrog 98.7 6.3E-06 2.2E-10 89.7 28.7 256 43-328 29-330 (361)
187 1rwi_B Serine/threonine-protei 98.7 1.4E-06 5E-11 89.9 21.5 227 27-294 25-264 (270)
188 3c5m_A Oligogalacturonate lyas 98.7 3.2E-07 1.1E-11 100.4 17.2 229 35-295 47-330 (396)
189 2xdw_A Prolyl endopeptidase; a 98.7 9.2E-06 3.2E-10 96.9 30.7 249 28-295 127-415 (710)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 5.6E-06 1.9E-10 87.4 25.2 228 29-294 21-299 (314)
191 1qks_A Cytochrome CD1 nitrite 98.6 1.8E-05 6E-10 91.4 30.4 223 37-294 169-421 (567)
192 3no2_A Uncharacterized protein 98.6 2.3E-06 7.7E-11 89.5 21.0 182 33-253 3-197 (276)
193 2xdw_A Prolyl endopeptidase; a 98.6 1.3E-05 4.4E-10 95.6 29.9 202 63-294 123-368 (710)
194 2xzh_A Clathrin heavy chain 1; 98.6 2.3E-05 7.8E-10 81.4 27.3 212 134-360 70-360 (365)
195 3dsm_A Uncharacterized protein 98.6 2.3E-06 7.9E-11 91.8 20.4 191 27-253 85-303 (328)
196 3dr2_A Exported gluconolactona 98.6 5.1E-06 1.8E-10 88.0 22.6 184 37-253 59-268 (305)
197 2gop_A Trilobed protease; beta 98.6 2.3E-05 7.8E-10 84.0 27.9 215 27-293 16-290 (347)
198 2z2n_A Virginiamycin B lyase; 98.6 1.5E-05 5.3E-10 83.0 25.8 188 26-252 57-255 (299)
199 3c5m_A Oligogalacturonate lyas 98.6 5.6E-07 1.9E-11 98.5 15.2 182 34-253 91-330 (396)
200 1rwi_B Serine/threonine-protei 98.6 1.4E-06 4.9E-11 89.9 17.5 188 27-251 68-263 (270)
201 1xip_A Nucleoporin NUP159; bet 98.5 2.2E-06 7.7E-11 93.5 18.0 194 66-296 39-257 (388)
202 2oiz_A Aromatic amine dehydrog 98.5 1.2E-05 4.1E-10 87.5 24.0 227 31-299 56-341 (361)
203 1xip_A Nucleoporin NUP159; bet 98.5 4.5E-06 1.5E-10 91.1 19.5 168 27-240 39-230 (388)
204 2gop_A Trilobed protease; beta 98.5 1.7E-05 5.7E-10 85.1 23.2 187 28-251 61-290 (347)
205 2bkl_A Prolyl endopeptidase; m 98.4 1.3E-05 4.5E-10 95.4 24.1 238 27-296 71-353 (695)
206 3g4e_A Regucalcin; six bladed 98.4 4.5E-05 1.5E-09 80.3 24.7 185 35-251 24-228 (297)
207 1yr2_A Prolyl oligopeptidase; 98.4 5.3E-05 1.8E-09 90.8 27.3 238 27-296 110-397 (741)
208 2bkl_A Prolyl endopeptidase; m 98.4 1.4E-05 4.6E-10 95.2 21.9 243 28-296 123-399 (695)
209 2ghs_A AGR_C_1268P; regucalcin 98.4 4.5E-05 1.6E-09 81.5 23.4 184 37-253 63-261 (326)
210 1b89_A Protein (clathrin heavy 98.3 0.00015 5.1E-09 79.5 25.5 245 331-613 149-401 (449)
211 2qc5_A Streptogramin B lactona 98.2 0.00031 1.1E-08 72.9 26.0 225 63-329 18-257 (300)
212 1yr2_A Prolyl oligopeptidase; 98.2 0.0002 6.9E-09 85.7 26.5 239 36-297 175-444 (741)
213 3sjl_D Methylamine dehydrogena 98.2 0.0016 5.3E-08 70.7 30.6 262 35-328 44-359 (386)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 0.00021 7.3E-09 75.1 22.6 201 27-254 72-301 (314)
215 3hrp_A Uncharacterized protein 98.1 0.00052 1.8E-08 75.9 25.2 190 28-250 133-352 (409)
216 3no2_A Uncharacterized protein 98.1 0.0002 6.9E-09 74.6 20.4 177 31-240 43-229 (276)
217 3iuj_A Prolyl endopeptidase; h 98.0 0.00018 6.3E-09 85.3 21.7 203 63-297 127-362 (693)
218 3hxj_A Pyrrolo-quinoline quino 98.0 0.00025 8.7E-09 75.0 19.9 250 29-329 63-321 (330)
219 3hrp_A Uncharacterized protein 98.0 0.0011 3.9E-08 73.1 25.4 223 66-328 132-406 (409)
220 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0023 7.9E-08 69.3 26.5 258 29-329 97-375 (376)
221 2mad_H Methylamine dehydrogena 97.9 0.009 3.1E-07 64.9 31.1 261 35-329 32-347 (373)
222 3dr2_A Exported gluconolactona 97.9 0.00087 3E-08 70.6 20.8 193 28-249 88-303 (305)
223 1npe_A Nidogen, entactin; glyc 97.8 0.0077 2.6E-07 61.7 26.2 222 36-297 2-241 (267)
224 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.011 3.6E-07 64.0 28.4 251 34-329 52-334 (376)
225 3c75_H MADH, methylamine dehyd 97.8 0.013 4.4E-07 64.5 28.9 260 36-328 85-398 (426)
226 1qks_A Cytochrome CD1 nitrite 97.8 0.0022 7.6E-08 73.8 23.5 189 74-300 165-379 (567)
227 4a2l_A BT_4663, two-component 97.8 0.02 6.9E-07 68.8 33.0 266 25-331 309-613 (795)
228 3g4e_A Regucalcin; six bladed 97.7 0.0036 1.2E-07 65.5 22.7 186 25-240 53-259 (297)
229 2fp8_A Strictosidine synthase; 97.7 0.005 1.7E-07 65.2 23.4 225 36-296 31-315 (322)
230 3hxj_A Pyrrolo-quinoline quino 97.7 0.0013 4.3E-08 69.6 18.0 178 34-253 106-285 (330)
231 2ece_A 462AA long hypothetical 97.6 0.0028 9.7E-08 69.5 20.1 179 31-239 144-396 (462)
232 3sjl_D Methylamine dehydrogena 97.6 0.0097 3.3E-07 64.5 23.9 217 43-299 107-368 (386)
233 4a2l_A BT_4663, two-component 97.6 0.057 2E-06 64.8 33.4 263 25-330 356-657 (795)
234 3iuj_A Prolyl endopeptidase; h 97.6 0.0067 2.3E-07 71.8 24.7 240 28-295 131-406 (693)
235 2ghs_A AGR_C_1268P; regucalcin 97.5 0.0081 2.8E-07 63.8 21.7 182 26-240 90-289 (326)
236 3v9f_A Two-component system se 97.4 0.099 3.4E-06 62.6 32.2 266 25-331 312-610 (781)
237 2mad_H Methylamine dehydrogena 97.4 0.065 2.2E-06 58.0 26.9 231 31-298 72-354 (373)
238 2qe8_A Uncharacterized protein 97.3 0.01 3.5E-07 63.4 20.2 187 27-241 68-308 (343)
239 2hz6_A Endoplasmic reticulum t 97.3 0.00016 5.6E-09 78.7 5.4 178 32-251 6-191 (369)
240 3v64_C Agrin; beta propeller, 97.3 0.13 4.5E-06 55.0 28.4 228 25-292 33-273 (349)
241 2qe8_A Uncharacterized protein 97.3 0.0085 2.9E-07 64.1 18.6 196 28-253 19-280 (343)
242 2xpi_A Anaphase-promoting comp 97.3 0.15 5E-06 58.4 30.5 254 334-613 154-488 (597)
243 3v65_B Low-density lipoprotein 97.2 0.13 4.4E-06 55.9 27.4 226 27-292 78-316 (386)
244 1mda_H Methylamine dehydrogena 97.2 0.028 9.7E-07 60.6 21.1 93 46-162 47-156 (368)
245 3v9f_A Two-component system se 97.1 0.25 8.4E-06 59.1 30.6 264 25-329 257-565 (781)
246 2xpi_A Anaphase-promoting comp 97.0 0.12 4.2E-06 59.0 26.7 222 371-613 279-529 (597)
247 3mkq_B Coatomer subunit alpha; 97.0 0.018 6.1E-07 54.6 15.2 132 331-495 6-137 (177)
248 3c75_H MADH, methylamine dehyd 97.0 0.011 3.9E-07 65.0 15.8 191 31-252 124-402 (426)
249 1w3b_A UDP-N-acetylglucosamine 96.9 0.16 5.3E-06 54.6 24.7 251 337-613 6-284 (388)
250 3p5b_L Low density lipoprotein 96.9 0.27 9.2E-06 53.6 26.5 229 28-292 75-318 (400)
251 2fp8_A Strictosidine synthase; 96.9 0.15 5E-06 53.6 23.4 191 28-255 82-316 (322)
252 3sov_A LRP-6, low-density lipo 96.7 0.6 2.1E-05 49.0 26.4 220 35-293 4-237 (318)
253 1yiq_A Quinohemoprotein alcoho 96.7 0.17 5.8E-06 59.5 24.2 30 33-62 119-149 (689)
254 3m0c_C LDL receptor, low-densi 96.7 0.46 1.6E-05 56.5 27.7 231 28-293 387-631 (791)
255 1w3b_A UDP-N-acetylglucosamine 96.7 0.24 8.3E-06 53.1 23.7 250 338-613 41-318 (388)
256 2xe4_A Oligopeptidase B; hydro 96.7 0.12 4.2E-06 61.5 23.0 196 66-292 175-398 (751)
257 1npe_A Nidogen, entactin; glyc 96.6 0.26 8.8E-06 50.0 22.2 187 28-251 38-237 (267)
258 2p4o_A Hypothetical protein; p 96.5 0.3 1E-05 50.8 22.7 191 28-253 34-243 (306)
259 1kb0_A Quinohemoprotein alcoho 96.5 0.25 8.6E-06 58.0 24.1 31 33-63 126-157 (677)
260 1mda_H Methylamine dehydrogena 96.5 0.041 1.4E-06 59.3 15.4 65 30-103 70-157 (368)
261 2ece_A 462AA long hypothetical 96.4 0.11 3.8E-06 56.9 18.2 191 35-251 95-351 (462)
262 1fwx_A Nitrous oxide reductase 96.3 0.28 9.5E-06 55.6 21.4 183 75-294 100-361 (595)
263 3tc9_A Hypothetical hydrolase; 96.2 0.8 2.7E-05 50.4 24.3 147 35-211 149-301 (430)
264 1ijq_A LDL receptor, low-densi 96.1 1.6 5.5E-05 45.5 27.5 220 37-293 3-237 (316)
265 3ieg_A DNAJ homolog subfamily 96.0 0.88 3E-05 47.3 23.1 55 337-392 10-65 (359)
266 4hw6_A Hypothetical protein, I 96.0 1.4 4.8E-05 48.4 25.3 187 35-252 152-374 (433)
267 3ieg_A DNAJ homolog subfamily 96.0 1.2 4E-05 46.4 24.0 250 337-611 44-351 (359)
268 2y4t_A DNAJ homolog subfamily 95.9 0.82 2.8E-05 49.8 23.2 220 366-609 96-372 (450)
269 2iwa_A Glutamine cyclotransfer 95.9 1.2 4E-05 45.4 22.2 183 29-251 24-236 (266)
270 1kb0_A Quinohemoprotein alcoho 95.9 0.22 7.6E-06 58.4 19.0 63 34-105 253-347 (677)
271 3mkr_A Coatomer subunit epsilo 95.8 2 7E-05 44.1 24.4 234 336-596 5-268 (291)
272 3qil_A Clathrin heavy chain 1; 95.8 0.0011 3.9E-08 57.3 -0.9 104 705-820 16-119 (125)
273 3v64_C Agrin; beta propeller, 95.8 0.95 3.2E-05 48.2 22.1 180 35-249 84-272 (349)
274 3qqz_A Putative uncharacterize 95.8 1.9 6.7E-05 43.5 25.5 201 26-250 27-251 (255)
275 3v65_B Low-density lipoprotein 95.7 0.87 3E-05 49.2 21.5 186 28-249 118-315 (386)
276 3qqz_A Putative uncharacterize 95.7 1.9 6.4E-05 43.6 22.4 118 63-210 25-150 (255)
277 3hym_B Cell division cycle pro 95.6 1.6 5.4E-05 44.8 22.9 21 700-720 275-295 (330)
278 2y4t_A DNAJ homolog subfamily 95.6 1.1 3.6E-05 48.8 22.5 54 337-391 33-87 (450)
279 1yiq_A Quinohemoprotein alcoho 95.6 0.57 1.9E-05 55.1 20.9 63 34-105 245-339 (689)
280 2iwa_A Glutamine cyclotransfer 95.6 0.31 1.1E-05 49.8 16.2 151 31-212 71-238 (266)
281 2hz6_A Endoplasmic reticulum t 95.4 0.013 4.5E-07 63.4 5.7 171 142-329 9-189 (369)
282 4a0p_A LRP6, LRP-6, low-densit 95.4 5 0.00017 46.3 27.8 219 34-292 5-235 (628)
283 2gw1_A Mitochondrial precursor 95.4 4.1 0.00014 44.7 29.5 84 337-423 13-103 (514)
284 3pbp_A Nucleoporin NUP82; beta 95.3 0.72 2.5E-05 49.9 18.5 161 30-206 27-207 (452)
285 1kv9_A Type II quinohemoprotei 95.3 2 6.9E-05 50.1 24.4 29 34-62 116-145 (668)
286 1fch_A Peroxisomal targeting s 95.3 1.3 4.5E-05 46.5 20.9 34 577-613 265-298 (368)
287 3tc9_A Hypothetical hydrolase; 95.2 2.7 9.2E-05 46.1 23.8 151 66-252 138-301 (430)
288 2xe4_A Oligopeptidase B; hydro 95.2 3.5 0.00012 48.8 26.4 187 36-250 187-398 (751)
289 1fwx_A Nitrous oxide reductase 95.2 0.88 3E-05 51.6 19.7 193 36-252 102-361 (595)
290 3nol_A Glutamine cyclotransfer 95.1 1 3.5E-05 45.6 18.1 171 29-241 46-243 (262)
291 3ei3_A DNA damage-binding prot 95.0 7.6 0.00026 48.2 29.2 194 25-251 513-723 (1158)
292 3cv0_A Peroxisome targeting si 94.9 1.3 4.4E-05 45.4 19.2 57 334-391 25-82 (327)
293 2p9w_A MAL S 1 allergenic prot 94.9 1.9 6.4E-05 45.2 19.9 158 34-210 23-214 (334)
294 1ijq_A LDL receptor, low-densi 94.8 3.5 0.00012 42.9 22.4 187 28-250 32-236 (316)
295 3sre_A PON1, serum paraoxonase 94.7 1.6 5.5E-05 46.5 19.3 185 25-240 52-283 (355)
296 3sov_A LRP-6, low-density lipo 94.7 3.3 0.00011 43.2 21.8 181 35-250 46-236 (318)
297 3nok_A Glutaminyl cyclase; bet 94.7 0.64 2.2E-05 47.1 15.2 169 29-240 58-252 (268)
298 3vtx_A MAMA; tetratricopeptide 94.7 0.63 2.2E-05 43.6 14.8 25 366-390 7-31 (184)
299 3ott_A Two-component system se 94.7 0.95 3.2E-05 53.7 19.5 190 25-251 62-259 (758)
300 4a1s_A PINS, partner of inscut 94.6 5.6 0.00019 42.3 24.8 55 338-392 56-114 (411)
301 3ro2_A PINS homolog, G-protein 94.4 4.9 0.00017 40.8 24.9 54 338-391 13-70 (338)
302 3nol_A Glutamine cyclotransfer 94.4 0.59 2E-05 47.3 14.3 140 31-202 92-245 (262)
303 3mbr_X Glutamine cyclotransfer 94.3 4.7 0.00016 40.2 20.7 172 28-240 23-221 (243)
304 2xbg_A YCF48-like protein; pho 94.3 1.6 5.6E-05 45.7 18.4 188 27-251 81-277 (327)
305 1n7d_A LDL receptor, low-densi 94.3 0.1 3.6E-06 61.5 9.7 223 37-296 379-616 (699)
306 3s94_A LRP-6, low-density lipo 94.1 4.5 0.00015 46.6 22.8 215 42-293 15-242 (619)
307 3uq3_A Heat shock protein STI1 93.9 1.4 4.9E-05 43.2 16.3 57 336-392 44-107 (258)
308 3fp2_A TPR repeat-containing p 93.9 9.5 0.00032 42.1 26.1 53 338-391 33-86 (537)
309 3m0c_C LDL receptor, low-densi 93.7 9.6 0.00033 45.2 25.2 187 133-329 426-629 (791)
310 3hym_B Cell division cycle pro 93.7 0.83 2.8E-05 47.0 14.5 255 334-610 26-314 (330)
311 3cv0_A Peroxisome targeting si 93.6 0.57 2E-05 48.2 13.1 55 337-392 62-117 (327)
312 4eqf_A PEX5-related protein; a 93.6 2.8 9.5E-05 44.0 18.8 58 333-391 68-126 (365)
313 3ott_A Two-component system se 93.6 15 0.00051 43.2 29.6 186 27-249 104-304 (758)
314 2ism_A Putative oxidoreductase 93.5 8.9 0.00031 40.5 23.5 105 66-200 32-152 (352)
315 2xbg_A YCF48-like protein; pho 93.5 5.2 0.00018 41.7 20.4 184 28-249 124-319 (327)
316 2ho1_A Type 4 fimbrial biogene 93.2 0.38 1.3E-05 47.7 10.4 53 338-391 45-98 (252)
317 2q7f_A YRRB protein; TPR, prot 93.2 0.29 9.8E-06 48.1 9.4 55 336-391 29-84 (243)
318 3p5b_L Low density lipoprotein 92.8 12 0.00042 40.2 24.0 187 28-249 114-317 (400)
319 3s94_A LRP-6, low-density lipo 92.7 17 0.00058 41.7 26.5 204 37-276 319-537 (619)
320 2vq2_A PILW, putative fimbrial 92.7 1.3 4.4E-05 42.4 13.3 55 337-392 15-70 (225)
321 4eqf_A PEX5-related protein; a 92.7 0.85 2.9E-05 48.1 12.8 57 335-392 104-161 (365)
322 2p4o_A Hypothetical protein; p 92.6 10 0.00035 38.9 23.0 145 133-294 34-198 (306)
323 3sf4_A G-protein-signaling mod 92.4 12 0.00042 39.2 24.8 56 336-391 15-74 (406)
324 3nok_A Glutaminyl cyclase; bet 92.4 2.5 8.4E-05 42.8 14.8 139 31-201 101-254 (268)
325 2ad6_A Methanol dehydrogenase 92.4 18 0.00061 41.0 24.9 29 33-61 113-142 (571)
326 3mbr_X Glutamine cyclotransfer 92.0 3.6 0.00012 41.1 15.4 138 32-201 71-223 (243)
327 1xnf_A Lipoprotein NLPI; TPR, 91.9 9.6 0.00033 37.5 19.2 198 343-545 18-242 (275)
328 1fch_A Peroxisomal targeting s 91.8 1.2 4.2E-05 46.7 12.8 204 334-545 68-312 (368)
329 3as5_A MAMA; tetratricopeptide 91.6 2.1 7.1E-05 39.3 12.9 55 337-392 15-70 (186)
330 2pl2_A Hypothetical conserved 91.5 1.2 4E-05 43.5 11.3 54 337-391 12-66 (217)
331 3q15_A PSP28, response regulat 91.5 16 0.00054 38.5 23.8 22 699-720 340-361 (378)
332 3vtx_A MAMA; tetratricopeptide 90.9 1.3 4.4E-05 41.4 10.7 53 338-391 13-66 (184)
333 2g8s_A Glucose/sorbosone dehyd 90.8 18 0.00062 38.1 22.1 47 284-330 298-352 (353)
334 3ffl_A Anaphase-promoting comp 90.4 0.79 2.7E-05 42.6 8.0 62 329-390 19-89 (167)
335 3mkr_A Coatomer subunit epsilo 90.3 2.7 9.1E-05 43.2 13.2 166 337-512 72-260 (291)
336 2ho1_A Type 4 fimbrial biogene 90.2 2.6 8.7E-05 41.4 12.7 55 337-392 78-133 (252)
337 4hw6_A Hypothetical protein, I 90.1 24 0.00082 38.4 25.0 149 66-251 140-303 (433)
338 1xnf_A Lipoprotein NLPI; TPR, 89.9 2.5 8.6E-05 41.9 12.5 170 337-512 50-240 (275)
339 4a0p_A LRP6, LRP-6, low-densit 89.9 32 0.0011 39.4 26.8 182 133-329 39-234 (628)
340 3as5_A MAMA; tetratricopeptide 89.6 3.8 0.00013 37.4 12.7 80 363-442 7-91 (186)
341 3q15_A PSP28, response regulat 89.1 4.8 0.00016 42.7 14.6 54 339-392 150-210 (378)
342 3ulq_A Response regulator aspa 89.0 8.9 0.0003 40.5 16.7 54 339-392 152-212 (383)
343 1k3i_A Galactose oxidase precu 88.9 38 0.0013 39.0 23.3 109 28-162 189-321 (656)
344 4abn_A Tetratricopeptide repea 88.7 1.5 5E-05 48.8 10.4 26 366-391 139-164 (474)
345 2ad6_A Methanol dehydrogenase 88.6 14 0.00049 41.9 18.8 60 35-104 246-335 (571)
346 1kv9_A Type II quinohemoprotei 88.5 16 0.00056 42.3 19.6 63 34-105 240-334 (668)
347 3nf1_A KLC 1, kinesin light ch 88.1 2.6 8.9E-05 42.6 11.2 56 337-392 34-97 (311)
348 1n7d_A LDL receptor, low-densi 87.5 2.5 8.4E-05 49.6 11.7 181 35-250 417-612 (699)
349 3a9g_A Putative uncharacterize 87.4 31 0.0011 36.3 26.3 147 65-240 29-214 (354)
350 2yhc_A BAMD, UPF0169 lipoprote 87.3 21 0.00073 34.3 17.0 56 336-391 10-68 (225)
351 3u4t_A TPR repeat-containing p 87.1 4.4 0.00015 40.1 12.1 110 335-445 8-126 (272)
352 3kya_A Putative phosphatase; s 87.1 41 0.0014 37.2 26.8 157 67-252 141-341 (496)
353 3u3w_A Transcriptional activat 86.9 27 0.00092 35.2 18.2 59 334-392 79-143 (293)
354 3kya_A Putative phosphatase; s 86.3 45 0.0015 36.9 25.0 166 28-211 141-341 (496)
355 3gw4_A Uncharacterized protein 85.8 5.3 0.00018 37.4 11.2 53 340-392 2-54 (203)
356 3pbp_A Nucleoporin NUP82; beta 85.7 43 0.0015 36.2 22.7 131 195-331 34-211 (452)
357 2q7f_A YRRB protein; TPR, prot 85.6 2.8 9.6E-05 40.7 9.4 55 337-392 64-119 (243)
358 1tl2_A L10, protein (tachylect 85.5 1.7 5.8E-05 42.7 7.2 100 133-245 43-156 (236)
359 2gw1_A Mitochondrial precursor 85.3 5.1 0.00018 44.0 12.5 51 339-391 246-297 (514)
360 3fp2_A TPR repeat-containing p 85.1 4.6 0.00016 44.8 12.0 19 577-595 476-494 (537)
361 2pl2_A Hypothetical conserved 84.7 11 0.00039 36.2 13.3 74 366-440 7-86 (217)
362 3u4t_A TPR repeat-containing p 84.3 5.4 0.00019 39.5 11.0 58 335-392 42-102 (272)
363 1w6s_A Methanol dehydrogenase 84.3 62 0.0021 36.8 24.7 24 38-61 124-148 (599)
364 2g8s_A Glucose/sorbosone dehyd 83.9 7.5 0.00026 41.1 12.4 116 133-253 20-174 (353)
365 4ga2_A E3 SUMO-protein ligase 83.7 4.2 0.00014 36.8 9.0 51 342-392 9-59 (150)
366 3edt_B KLC 2, kinesin light ch 83.2 13 0.00045 36.4 13.5 56 337-392 50-113 (283)
367 3amr_A 3-phytase; beta-propell 82.5 52 0.0018 34.6 20.4 189 37-252 42-263 (355)
368 2lni_A Stress-induced-phosphop 81.8 5 0.00017 34.3 8.5 57 335-392 21-78 (133)
369 2r5s_A Uncharacterized protein 81.5 16 0.00055 33.5 12.5 57 334-391 10-67 (176)
370 3mkq_B Coatomer subunit alpha; 80.8 34 0.0012 32.0 13.9 82 431-517 51-132 (177)
371 4gyw_A UDP-N-acetylglucosamine 80.6 5.7 0.00019 46.7 10.6 53 338-391 17-70 (723)
372 3qky_A Outer membrane assembly 80.5 17 0.00057 35.9 13.0 56 337-392 22-80 (261)
373 3s25_A Hypothetical 7-bladed b 80.5 54 0.0019 33.5 28.8 219 32-294 22-255 (302)
374 3a9g_A Putative uncharacterize 80.2 36 0.0012 35.8 16.0 50 33-84 37-96 (354)
375 1flg_A Protein (quinoprotein e 80.1 16 0.00053 41.7 13.9 26 37-62 338-364 (582)
376 2fo7_A Synthetic consensus TPR 80.0 5.8 0.0002 33.6 8.2 54 337-391 8-62 (136)
377 3uq3_A Heat shock protein STI1 79.9 8 0.00027 37.5 10.2 19 337-355 86-104 (258)
378 2vq2_A PILW, putative fimbrial 79.5 6.2 0.00021 37.4 9.0 146 337-485 49-207 (225)
379 1w6s_A Methanol dehydrogenase 79.2 81 0.0028 35.8 19.5 61 34-104 251-342 (599)
380 4i17_A Hypothetical protein; T 79.1 7.4 0.00025 37.5 9.6 56 337-392 14-70 (228)
381 4ga2_A E3 SUMO-protein ligase 79.0 3.2 0.00011 37.6 6.3 53 338-391 39-92 (150)
382 2vyi_A SGTA protein; chaperone 78.5 4.8 0.00016 34.1 7.1 55 337-392 19-74 (131)
383 4gcn_A Protein STI-1; structur 77.7 5.1 0.00018 35.0 7.1 54 338-391 50-110 (127)
384 3ma5_A Tetratricopeptide repea 77.1 3.1 0.00011 34.6 5.2 76 338-420 15-91 (100)
385 4g26_A Pentatricopeptide repea 76.5 31 0.001 38.4 14.6 49 464-513 144-201 (501)
386 2ism_A Putative oxidoreductase 75.7 8.9 0.00031 40.5 9.6 102 133-241 33-152 (352)
387 3edt_B KLC 2, kinesin light ch 75.4 24 0.00084 34.3 12.5 49 344-392 22-71 (283)
388 3s25_A Hypothetical 7-bladed b 74.8 78 0.0027 32.3 18.7 197 28-274 57-277 (302)
389 3sre_A PON1, serum paraoxonase 74.3 90 0.0031 32.8 18.1 132 133-277 114-285 (355)
390 4a1s_A PINS, partner of inscut 74.0 35 0.0012 35.8 14.1 45 346-391 199-250 (411)
391 2kc7_A BFR218_protein; tetratr 73.1 2.8 9.5E-05 34.3 3.8 57 335-391 5-62 (99)
392 1flg_A Protein (quinoprotein e 72.9 1.3E+02 0.0044 33.9 22.2 51 45-105 291-356 (582)
393 4gco_A Protein STI-1; structur 72.9 19 0.00064 31.2 9.5 33 358-391 8-40 (126)
394 4g26_A Pentatricopeptide repea 72.4 57 0.002 36.1 15.6 151 334-485 30-200 (501)
395 4gq2_M Nucleoporin NUP120; bet 71.8 66 0.0023 38.9 17.0 30 66-104 237-266 (950)
396 3mv2_B Coatomer subunit epsilo 71.8 54 0.0018 33.8 13.9 53 338-390 108-162 (310)
397 3ro2_A PINS homolog, G-protein 71.4 39 0.0013 33.7 13.2 45 346-391 159-210 (338)
398 3amr_A 3-phytase; beta-propell 71.4 1E+02 0.0036 32.2 17.7 150 38-211 88-263 (355)
399 3ei3_A DNA damage-binding prot 71.2 2E+02 0.0069 35.5 35.4 63 25-87 553-628 (1158)
400 1ouv_A Conserved hypothetical 70.4 83 0.0028 30.7 21.1 103 338-444 14-131 (273)
401 2h6f_A Protein farnesyltransfe 70.1 3.9 0.00013 44.0 5.1 54 338-392 105-160 (382)
402 2vsy_A XCC0866; transferase, g 70.1 11 0.00037 42.6 9.1 26 366-391 25-50 (568)
403 4gco_A Protein STI-1; structur 70.0 6 0.00021 34.5 5.5 54 337-391 20-74 (126)
404 1cru_A Protein (soluble quinop 69.7 20 0.00068 39.4 10.8 98 133-240 29-160 (454)
405 3qky_A Outer membrane assembly 69.6 85 0.0029 30.5 18.2 29 365-393 16-44 (261)
406 1hh8_A P67PHOX, NCF-2, neutrop 68.7 37 0.0013 31.7 11.5 52 337-391 13-64 (213)
407 2dba_A Smooth muscle cell asso 67.9 44 0.0015 28.7 11.1 56 336-391 34-92 (148)
408 3qhy_B Beta-lactamase inhibito 67.1 1.1E+02 0.0037 30.8 26.2 249 23-325 21-275 (282)
409 4gyw_A UDP-N-acetylglucosamine 67.0 8.7 0.0003 45.1 7.5 144 364-512 9-170 (723)
410 2fo7_A Synthetic consensus TPR 66.8 48 0.0016 27.4 10.9 25 367-391 4-28 (136)
411 3das_A Putative oxidoreductase 66.4 38 0.0013 35.6 11.7 100 133-240 34-156 (347)
412 1k3i_A Galactose oxidase precu 66.4 1.8E+02 0.0062 33.1 21.1 80 69-163 190-273 (656)
413 3sf4_A G-protein-signaling mod 65.9 1.3E+02 0.0043 31.0 23.9 54 338-391 55-114 (406)
414 1na0_A Designed protein CTPR3; 65.7 14 0.00049 30.6 7.0 54 337-391 16-70 (125)
415 3upv_A Heat shock protein STI1 65.3 9.6 0.00033 32.6 5.8 54 337-391 11-65 (126)
416 2pzi_A Probable serine/threoni 64.6 10 0.00036 44.0 7.6 52 340-392 401-461 (681)
417 2xev_A YBGF; tetratricopeptide 64.5 18 0.0006 30.7 7.4 58 335-392 7-67 (129)
418 2ond_A Cleavage stimulation fa 64.3 1.2E+02 0.0042 30.4 18.0 70 473-543 182-266 (308)
419 3das_A Putative oxidoreductase 63.7 1.5E+02 0.005 31.0 25.8 153 65-240 32-218 (347)
420 2fbn_A 70 kDa peptidylprolyl i 63.4 28 0.00097 32.4 9.4 55 338-392 46-116 (198)
421 1na3_A Designed protein CTPR2; 63.3 3.6 0.00012 32.7 2.4 53 338-391 17-70 (91)
422 3urz_A Uncharacterized protein 62.9 49 0.0017 31.2 11.1 55 336-391 10-81 (208)
423 2xcb_A PCRH, regulatory protei 62.3 7.4 0.00025 34.5 4.6 53 338-391 26-79 (142)
424 4abn_A Tetratricopeptide repea 61.2 25 0.00084 38.7 9.6 54 337-392 144-207 (474)
425 2vpj_A Kelch-like protein 12; 60.9 1.4E+02 0.0047 29.8 17.8 71 28-104 56-137 (301)
426 1tl2_A L10, protein (tachylect 60.9 69 0.0024 31.3 11.2 105 27-158 42-157 (236)
427 1bpo_A Protein (clathrin); cla 60.3 1.9E+02 0.0066 31.3 20.0 158 34-212 115-290 (494)
428 3u3w_A Transcriptional activat 59.6 1.4E+02 0.0048 29.5 20.9 24 369-392 80-103 (293)
429 3upv_A Heat shock protein STI1 59.6 49 0.0017 27.8 9.5 29 364-392 4-32 (126)
430 3sz7_A HSC70 cochaperone (SGT) 59.0 9.6 0.00033 34.5 4.9 55 337-392 18-73 (164)
431 3ro3_A PINS homolog, G-protein 58.7 87 0.003 26.8 17.1 52 339-390 18-75 (164)
432 2vsy_A XCC0866; transferase, g 58.4 29 0.00098 39.0 9.7 102 337-440 30-138 (568)
433 3k9i_A BH0479 protein; putativ 58.3 6.3 0.00021 33.5 3.2 29 363-391 26-54 (117)
434 2l6j_A TPR repeat-containing p 57.9 4.6 0.00016 33.5 2.2 54 338-392 12-66 (111)
435 1ihg_A Cyclophilin 40; ppiase 57.8 46 0.0016 35.1 10.7 56 337-392 230-301 (370)
436 2e2e_A Formate-dependent nitri 57.7 7.5 0.00026 35.7 3.9 50 340-391 20-71 (177)
437 1cru_A Protein (soluble quinop 57.3 1.9E+02 0.0066 31.3 15.9 56 29-84 30-100 (454)
438 2lni_A Stress-induced-phosphop 57.2 58 0.002 27.1 9.6 30 364-393 16-45 (133)
439 1elw_A TPR1-domain of HOP; HOP 56.5 27 0.00093 28.4 7.1 55 336-391 10-65 (118)
440 2h6f_A Protein farnesyltransfe 56.4 13 0.00046 39.7 6.1 56 336-392 137-194 (382)
441 1p5q_A FKBP52, FK506-binding p 56.4 13 0.00044 38.8 5.8 56 337-392 154-224 (336)
442 1a17_A Serine/threonine protei 56.1 64 0.0022 28.2 10.1 12 501-512 131-142 (166)
443 2xev_A YBGF; tetratricopeptide 55.9 15 0.0005 31.3 5.3 24 369-392 7-30 (129)
444 1elr_A TPR2A-domain of HOP; HO 55.8 24 0.00081 29.5 6.7 49 338-390 12-64 (131)
445 2vgx_A Chaperone SYCD; alterna 55.2 19 0.00063 32.3 6.0 51 339-390 30-81 (148)
446 2kat_A Uncharacterized protein 55.0 16 0.00054 30.6 5.3 51 339-390 28-79 (115)
447 3qou_A Protein YBBN; thioredox 55.0 24 0.00084 35.6 7.6 52 338-390 125-177 (287)
448 1hh8_A P67PHOX, NCF-2, neutrop 55.0 77 0.0026 29.3 10.9 23 369-391 11-33 (213)
449 2qfc_A PLCR protein; TPR, HTH, 54.7 1.7E+02 0.0058 28.9 19.8 59 334-392 79-143 (293)
450 3rkv_A Putative peptidylprolyl 54.5 40 0.0014 30.1 8.4 30 363-392 10-39 (162)
451 2kck_A TPR repeat; tetratricop 54.2 4.3 0.00015 33.4 1.4 54 337-391 13-67 (112)
452 3gyz_A Chaperone protein IPGC; 54.0 5.6 0.00019 36.3 2.2 77 365-443 37-120 (151)
453 2kck_A TPR repeat; tetratricop 53.5 41 0.0014 27.0 7.7 26 367-392 9-34 (112)
454 3urz_A Uncharacterized protein 53.4 37 0.0013 32.1 8.3 27 369-396 9-35 (208)
455 1ouv_A Conserved hypothetical 53.0 1.7E+02 0.0057 28.4 17.5 173 366-545 8-213 (273)
456 4gcn_A Protein STI-1; structur 52.7 6.5 0.00022 34.3 2.4 25 367-391 11-35 (127)
457 4i17_A Hypothetical protein; T 52.1 79 0.0027 29.8 10.6 60 337-397 83-149 (228)
458 2ifu_A Gamma-SNAP; membrane fu 51.1 2E+02 0.0069 28.7 15.5 14 499-512 167-180 (307)
459 3sz7_A HSC70 cochaperone (SGT) 51.1 71 0.0024 28.4 9.5 30 363-392 10-39 (164)
460 2fbn_A 70 kDa peptidylprolyl i 51.0 13 0.00045 34.9 4.5 30 363-392 37-66 (198)
461 2p9w_A MAL S 1 allergenic prot 51.0 2.3E+02 0.0078 29.3 14.3 112 28-162 65-213 (334)
462 4d9s_A UVB-resistance protein 50.5 2.5E+02 0.0086 29.7 35.2 277 25-328 15-353 (406)
463 4ady_A RPN2, 26S proteasome re 50.1 3.2E+02 0.011 32.7 16.7 27 363-389 144-170 (963)
464 2yhc_A BAMD, UPF0169 lipoprote 50.0 54 0.0018 31.3 8.9 56 337-392 48-124 (225)
465 1a17_A Serine/threonine protei 49.9 31 0.0011 30.4 6.8 53 338-391 21-74 (166)
466 1elw_A TPR1-domain of HOP; HOP 48.8 88 0.003 25.0 9.1 28 365-392 5-32 (118)
467 1na0_A Designed protein CTPR3; 48.6 76 0.0026 25.8 8.8 28 364-391 9-36 (125)
468 3q49_B STIP1 homology and U bo 48.1 84 0.0029 26.5 9.2 52 338-390 17-69 (137)
469 2v5f_A Prolyl 4-hydroxylase su 48.0 16 0.00055 30.5 4.0 59 338-397 13-78 (104)
470 2ynq_A ESSB; membrane protein, 47.7 1.4E+02 0.0048 27.2 10.2 83 344-438 43-135 (161)
471 3ii7_A Kelch-like protein 7; p 47.5 2.2E+02 0.0077 28.2 18.8 73 28-104 49-127 (306)
472 3ro3_A PINS homolog, G-protein 46.3 40 0.0014 29.1 6.9 54 338-391 57-116 (164)
473 2dba_A Smooth muscle cell asso 46.2 1.3E+02 0.0046 25.3 10.4 30 364-393 28-57 (148)
474 3rkv_A Putative peptidylprolyl 46.1 26 0.0009 31.4 5.6 62 335-397 16-95 (162)
475 4g1t_A Interferon-induced prot 45.9 62 0.0021 34.7 9.6 54 338-391 342-399 (472)
476 1hxi_A PEX5, peroxisome target 45.8 10 0.00034 32.7 2.4 56 335-391 22-78 (121)
477 3q49_B STIP1 homology and U bo 45.4 9.9 0.00034 32.8 2.4 78 364-442 9-92 (137)
478 2crb_A Nuclear receptor bindin 44.6 65 0.0022 26.4 6.6 31 360-390 11-41 (97)
479 4gq4_A Menin; tumor suppressor 43.4 14 0.00047 39.2 3.2 28 371-404 310-337 (489)
480 1qqe_A Vesicular transport pro 43.3 2.5E+02 0.0087 27.7 16.7 12 501-512 172-183 (292)
481 1na3_A Designed protein CTPR2; 43.2 82 0.0028 24.1 7.7 29 364-392 9-37 (91)
482 2vyi_A SGTA protein; chaperone 42.8 1.3E+02 0.0046 24.4 10.0 29 363-391 11-39 (131)
483 2wg3_C Hedgehog-interacting pr 42.5 96 0.0033 33.9 10.3 107 131-243 14-158 (463)
484 2xn4_A Kelch-like protein 2; s 42.1 2.7E+02 0.0091 27.6 18.0 71 29-103 56-132 (302)
485 3k9i_A BH0479 protein; putativ 41.8 13 0.00045 31.4 2.6 51 339-390 36-87 (117)
486 2ond_A Cleavage stimulation fa 40.6 1E+02 0.0035 31.0 9.7 48 344-392 78-127 (308)
487 2xcb_A PCRH, regulatory protei 40.3 1.2E+02 0.004 26.2 8.9 33 358-391 13-45 (142)
488 4fhn_B Nucleoporin NUP120; pro 39.9 55 0.0019 40.5 8.7 39 66-123 239-277 (1139)
489 3re2_A Predicted protein; meni 39.3 44 0.0015 34.7 6.1 21 370-390 302-322 (472)
490 2pzi_A Probable serine/threoni 39.1 22 0.00075 41.3 4.6 53 337-391 440-494 (681)
491 1w53_A Phosphoserine phosphata 38.4 34 0.0012 27.7 4.1 44 502-546 10-56 (84)
492 2qx5_A Nucleoporin NIC96; mRNA 38.0 2.6E+02 0.0087 32.0 13.1 34 465-498 448-481 (661)
493 3nf1_A KLC 1, kinesin light ch 37.8 2.9E+02 0.0099 26.7 18.5 22 699-720 199-220 (311)
494 3n71_A Histone lysine methyltr 37.1 94 0.0032 34.3 9.2 51 340-390 319-377 (490)
495 1kt0_A FKBP51, 51 kDa FK506-bi 36.9 86 0.003 34.0 8.9 30 363-392 267-296 (457)
496 3gw4_A Uncharacterized protein 36.7 41 0.0014 30.9 5.5 54 338-391 34-93 (203)
497 4aez_C MAD3, mitotic spindle c 36.6 1.7E+02 0.0058 28.4 9.6 24 697-720 152-175 (223)
498 2ooe_A Cleavage stimulation fa 36.2 1.9E+02 0.0065 31.6 11.8 29 364-392 321-349 (530)
499 1kt0_A FKBP51, 51 kDa FK506-bi 36.0 1.1E+02 0.0037 33.1 9.5 55 338-392 276-345 (457)
500 3ax2_A Mitochondrial import re 35.6 38 0.0013 26.6 3.9 39 363-403 18-57 (73)
No 1
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.96 E-value=1.8e-26 Score=276.94 Aligned_cols=537 Identities=16% Similarity=0.202 Sum_probs=392.7
Q ss_pred EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCC
Q 037368 134 TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQP 213 (823)
Q Consensus 134 ~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~ 213 (823)
-+.-.+|.... ||.-. +.++.+++.+. ..|.+. +.-+++|.- |.|-.. ..|..+|++.|+.|++.+..
T Consensus 69 dsAIMnP~~~i---iALra-g~~lQiFnl~~----k~klks-~~~~e~Vvf--WkWis~-~~l~lVT~~aVyHW~~~~~s 136 (1630)
T 1xi4_A 69 DSAIMNPASKV---IALKA-GKTLQIFNIEM----KSKMKA-HTMTDDVTF--WKWISL-NTVALVTDNAVYHWSMEGES 136 (1630)
T ss_pred hhhccCCCcce---EEEec-CCeEEEeehHH----hhhhcc-cccCCCceE--EEecCC-CeeEEEcCCeEEEeccCCCC
Confidence 33445787666 77664 67888998642 112221 222567775 444432 47888999999999998766
Q ss_pred CcceEEccCCCccceec----ccCCCe-EE-Eee-------CCeEEEEecCCCCccccccCC--------------eEEE
Q 037368 214 PKRQFLDNIGCSTNSVA----MSDRLE-LI-IGR-------PEAVYFYEVDGRGPCWAFEGE--------------KKLL 266 (823)
Q Consensus 214 ~~~~~l~~~~~~~~~~~----~s~~~~-li-v~~-------~~~I~i~~~~g~~~~~~~~g~--------------~~~i 266 (823)
.|.++++.|+.-.+|-. .+++.+ ++ +|- .|.+.+|+++ ++.+..++|| +..+
T Consensus 137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e-r~~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc-cccchhhhHhHhhhheeccCCCCCCceE
Confidence 78888887754433322 235554 32 331 2678899877 3322222222 1111
Q ss_pred ---Eee---Cc--EEEEEEec--CC------------------------------------CCccEEEEEeCCCCEEEEe
Q 037368 267 ---GWF---RG--YLLCVIAD--QR------------------------------------NSKNIFNVYDLKNRLIAHS 300 (823)
Q Consensus 267 ---~~~---~~--ylv~~s~d--~~------------------------------------~~~~~I~I~D~~~~~i~~~ 300 (823)
+.- |. +++-+..+ +. +..|.|.++|+.++...|.
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 111 11 33333221 10 1468899999999998888
Q ss_pred ccccc-eeEE---EeecCcEEEEEcCCeEEEEeecChHHHHHHHHHh-ccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhc
Q 037368 301 LVVKE-VSHM---LCEWGNIILVMTDKSVLCIGEKDMESKLDMLFKK-NLYTVAINLVQSQQADAAATAEVLRKYGDHLY 375 (823)
Q Consensus 301 ~~i~~-v~~v---~~~~~~~~vvs~~~~v~~l~~~~~~~~i~~L~~~-~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~ 375 (823)
.+++. ..|+ ....++++.|.+.|+|+.+. .+....+..+..+ ++-+.|+++|.+.++|. .++++.+..+.||
T Consensus 296 ~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~-v~~~~iv~yi~~~l~~~~la~~~a~r~~lpG--ad~l~~~~F~~l~ 372 (1630)
T 1xi4_A 296 NRISGETIFVTAPHEATAGIIGVNRKGQVLSVC-VEEENIIPYITNVLQNPDLALRMAVRNNLAG--AEELFARKFNALF 372 (1630)
T ss_pred ccccCCceEEeccCCCCCceEEEcCCceEEEEE-EccchhhhhHhhccCCHHHHHHHHHhcCCCC--chhHHHHHHHHHH
Confidence 88776 4443 23567899999999998886 6666777777654 78899999999999987 5688888899999
Q ss_pred cCCCHHHHHHHHHHH-hCCcChHHHHHHhhc----hhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhh
Q 037368 376 SKQDYDEAMSQYILT-IGHLEPSYVIQKFLD----AQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFI 450 (823)
Q Consensus 376 ~k~~y~~A~~~y~~t-i~~~eps~vI~kFl~----~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi 450 (823)
.+|+|.+||+..+.+ -|.++..++|.||.. +++..+|..|+..|.++|..|+..+..|.+|....++.+.|++|+
T Consensus 373 ~~g~y~~AA~~aa~sp~giLRt~~ti~rfk~~~~~pgq~~pll~YF~~ll~~g~Ln~~eSlEl~r~vl~q~r~~lle~Wl 452 (1630)
T 1xi4_A 373 AQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKWL 452 (1630)
T ss_pred HcCCHHHHHHHHHhCccccccCHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhchHHHHHHHH
Confidence 999999999999988 667898999999976 456789999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHHHHHhhcCHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 037368 451 KGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILI 530 (823)
Q Consensus 451 ~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~il~~~~~~~~~al~yl~~l~~~~~~~~i~k~~~~Ll 530 (823)
+..+ +.|.-+. =++++.+ ....|+..+.+-+-|.+++..+++. |+|+++++|.++.+....+..|.+. ++
T Consensus 453 ~e~K----L~~SEeL-GDlv~~~-d~~lAl~iY~~a~~~~Kvi~~l~~~-gq~~ki~~Y~~~~~~~pDy~~ll~~---~~ 522 (1630)
T 1xi4_A 453 KEDK----LECSEEL-GDLVKSV-DPTLALSVYLRANVPNKVIQCFAET-GQVQKIVLYAKKVGYTPDWIFLLRN---VM 522 (1630)
T ss_pred HhCC----ccccHHH-HHHHHhc-ChHHHHHHHHhcCCcHHHHHHHHHh-CCHHHHHHHHhccCCCccHHHHHHH---Hh
Confidence 9987 2232221 1333333 4556777777778999999999998 9999999999998766666666664 77
Q ss_pred hcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHHHHhhhcc--CcHHHHHHHHHHHhhcCCCCchhhHHHHHHH
Q 037368 531 EHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVDFLNIFVH--HPESLMDFLEKYTNKVKDSPAQVEIHNTLLE 608 (823)
Q Consensus 531 ~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~~yLe~~i~~~~~~~~~~~~~n~lle 608 (823)
+.+|+.++++...+..+.. | .+++..++.+|++ +-++.+.||..+++.+. |+...++++|||
T Consensus 523 ~~~P~~~~~fa~~L~~~~~-p-------------~~d~~~ivd~f~~~~~iq~~t~fLld~lk~n~--~e~~~LQTrlle 586 (1630)
T 1xi4_A 523 RISPDQGQQFAQMLVQDEE-P-------------LADITQIVDVFMEYNLIQQCTAFLLDALKNNR--PSEGPLQTRLLE 586 (1630)
T ss_pred hcChHHHHHHHHHHhcCCC-C-------------ccCHHHHHHHHHhcCcHHHHHHHHHHHHhCCC--hhhhhHhHHHHH
Confidence 8899999999888766532 2 5788999999985 56789999999998764 446799999999
Q ss_pred HhccccccCCcccccCcccccccccCCCCCCcccCCccccCCCCCCCCcchHHHHHHHHHHHhhcCCCCCCCCCCChhhH
Q 037368 609 LYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLA 688 (823)
Q Consensus 609 lyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~kll~~L~~~~~~~~~~~~Yd~~~a 688 (823)
+.|.. .| +-+..+|.+.. -++||.
T Consensus 587 ~Nl~~---~p---------------------------------------------qvadail~~~~-----fthyd~--- 610 (1630)
T 1xi4_A 587 MNLMH---AP---------------------------------------------QVADAILGNQM-----FTHYDR--- 610 (1630)
T ss_pred Hhhcc---ch---------------------------------------------hHHHHHHhcCc-----cccccH---
Confidence 99996 21 67777887722 578997
Q ss_pred HHHHHhcCCchhHHHHHHHhccHHHHHHHHHhcCChhHHHHHHHHhCCCCCCCCcchHHHHHHHhccCCCCC-HHHHHHH
Q 037368 689 IILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDC-SKEVKEV 767 (823)
Q Consensus 689 L~lc~~~~~~~~~v~L~~k~g~~~~al~~~~~~~d~~~~i~~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~-~~~i~~~ 767 (823)
..++.||++.|++++||++|.+..|+++++-.. .. -+.-| +..||.+.+.+. .++++++
T Consensus 611 ----------~~IA~LCE~aGl~qrale~y~d~~dikR~~~~~----~~----~~~~~--l~~~fg~l~~~~s~~~l~~~ 670 (1630)
T 1xi4_A 611 ----------AHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHT----HL----LNPEW--LVNYFGSLSVEDSLECLRAM 670 (1630)
T ss_pred ----------HHHHHHHHHcCcHHHHHHhcCCHHHHHHHhhcc----Cc----CCHHH--HHHHHhcCCHHHHHHHHHHH
Confidence 788999999999999999999999999887532 11 34578 689999876543 4677777
Q ss_pred HHH-HH------------hCCCCChHHHHHHhcC
Q 037368 768 LTY-IE------------RDDILPPIVVLQTLSR 788 (823)
Q Consensus 768 L~~-i~------------~~~~l~p~~vl~~l~~ 788 (823)
|.. +. =++.|.|..+++++-+
T Consensus 671 l~~n~~qnlq~vvqva~ky~~~lg~~~li~~fe~ 704 (1630)
T 1xi4_A 671 LSANIRQNLQICVQVASKYHEQLSTQSLIELFES 704 (1630)
T ss_pred HHHhHhhhhhhhhhHHHHHHhhcCHHHHHHHHHH
Confidence 752 11 1456777777777743
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.1e-24 Score=233.58 Aligned_cols=269 Identities=14% Similarity=0.169 Sum_probs=199.7
Q ss_pred CCCeEEEeeCC------CEEEEEecCCeEEEEc-CCCe--eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccce
Q 037368 25 SGNITCCSSGR------GKVVIGCDDGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAV 95 (823)
Q Consensus 25 ~~~is~~~~~~------~~l~~gs~dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~ 95 (823)
...|.|++..+ ..|++|+.||+|++|+ .+++ ...++.+|...|.++.+++++.+++|+|.|++
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~-------- 103 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH-------- 103 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE--------
T ss_pred CCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc--------
Confidence 34588888642 4799999999999999 4443 45578899999999999999999999999998
Q ss_pred eEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE
Q 037368 96 CLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ 175 (823)
Q Consensus 96 ~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~ 175 (823)
|++||+... .+++.+..+ . ..+.+++|+|+++. +|+|+.+|.|.+|+.. .+.+...+
T Consensus 104 -i~lWd~~~~----------~~~~~~~~~--~---~~~~~~~~spdg~~---l~~g~~dg~v~i~~~~----~~~~~~~~ 160 (321)
T 3ow8_A 104 -IRLWDLENG----------KQIKSIDAG--P---VDAWTLAFSPDSQY---LATGTHVGKVNIFGVE----SGKKEYSL 160 (321)
T ss_dssp -EEEEETTTT----------EEEEEEECC--T---TCCCCEEECTTSSE---EEEECTTSEEEEEETT----TCSEEEEE
T ss_pred -EEEEECCCC----------CEEEEEeCC--C---ccEEEEEECCCCCE---EEEEcCCCcEEEEEcC----CCceeEEe
Confidence 999999842 356665532 2 23899999999999 9999999999999863 22223334
Q ss_pred ecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeC-CeEEEEecCC
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRP-EAVYFYEVDG 252 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~-~~I~i~~~~g 252 (823)
..+...|++++|+|+|+ .|+++ .++.|++||+.+. .....+..|..++.+++|+|++++++ ++. +.|++|+++.
T Consensus 161 ~~~~~~v~~~~~spdg~--~lasg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 161 DTRGKFILSIAYSPDGK--YLASGAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp ECSSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTT-EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred cCCCceEEEEEECCCCC--EEEEEcCCCeEEEEECCCC-cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 45567899999999995 45555 4567999999754 35667778888999999999998654 443 5899999875
Q ss_pred CCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEe--ccccceeEE-EeecCcEEEEEcCCe
Q 037368 253 RGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHS--LVVKEVSHM-LCEWGNIILVMTDKS 324 (823)
Q Consensus 253 ~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~--~~i~~v~~v-~~~~~~~~vvs~~~~ 324 (823)
......+.+| ...++| .+.++++++ .+++|+|||+.++..... .+-..+..+ +++.+..++.++.+.
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDTHFVSSS-----SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEE-----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred cceeEEEcCCCCceEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 4333455565 345555 567888887 458999999988765433 333335555 677777777766666
Q ss_pred EEEEeecC
Q 037368 325 VLCIGEKD 332 (823)
Q Consensus 325 v~~l~~~~ 332 (823)
.++++..+
T Consensus 313 ~i~vwd~p 320 (321)
T 3ow8_A 313 EIHIYDCP 320 (321)
T ss_dssp CEEEEECC
T ss_pred eEEEEeCC
Confidence 77777543
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=1e-24 Score=244.37 Aligned_cols=266 Identities=13% Similarity=0.154 Sum_probs=200.1
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ ..+++|+.||+|++|| .+++..+++++|.+.|++++|+|+|++|+|||.|++ |+|||+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~---------i~iwd~ 179 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMT---------IKLWDF 179 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSC---------CCEEET
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCe---------EEEEeC
Confidence 3588888764 5899999999999999 778888999999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
... .+++++..+ ..+ |++++|+|++.. +++|+.||+|++|+.. .+.....+..+...|
T Consensus 180 ~~~----------~~~~~~~~h--~~~---V~~v~~~p~~~~---l~s~s~D~~i~~wd~~----~~~~~~~~~~h~~~v 237 (410)
T 1vyh_C 180 QGF----------ECIRTMHGH--DHN---VSSVSIMPNGDH---IVSASRDKTIKMWEVQ----TGYCVKTFTGHREWV 237 (410)
T ss_dssp TSS----------CEEECCCCC--SSC---EEEEEECSSSSE---EEEEETTSEEEEEETT----TCCEEEEEECCSSCE
T ss_pred CCC----------ceeEEEcCC--CCC---EEEEEEeCCCCE---EEEEeCCCeEEEEECC----CCcEEEEEeCCCccE
Confidence 742 356555432 334 999999999999 9999999999999863 233344455667899
Q ss_pred ceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCC--------------------Ce-EEEe
Q 037368 183 MGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDR--------------------LE-LIIG 240 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~--------------------~~-liv~ 240 (823)
+.+.|+++|+ .++++ .++.|++||+... .....+..|...+.|++|+|+ |. +++|
T Consensus 238 ~~~~~~~~g~--~l~s~s~D~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 238 RMVRPNQDGT--LIASCSNDQTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp EEEEECTTSS--EEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred EEEEECCCCC--EEEEEcCCCeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 9999999984 45555 4567999999754 355667778888999999885 33 4555
Q ss_pred e-CCeEEEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEE--EEeccccceeEE-Ee
Q 037368 241 R-PEAVYFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLI--AHSLVVKEVSHM-LC 311 (823)
Q Consensus 241 ~-~~~I~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i--~~~~~i~~v~~v-~~ 311 (823)
+ ++.|++|++........+.|| ...+.+ .+.++++++ .|++|+|||+.++.. .+..+-..|..+ ++
T Consensus 315 s~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-----~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA-----DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE-----TTTEEEEECCTTSCCCEEEECCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe-----CCCeEEEEECCCCceEEEEcCCCCcEEEEEEc
Confidence 4 458999998743333455555 344554 467888887 468999999976432 223333335554 67
Q ss_pred ecCcEEEEEcCCeEEEEee
Q 037368 312 EWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 312 ~~~~~~vvs~~~~v~~l~~ 330 (823)
+.+.+++.++.+..++++.
T Consensus 390 ~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 390 KTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SSSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEe
Confidence 7777777776666777764
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.93 E-value=1.7e-23 Score=224.32 Aligned_cols=266 Identities=12% Similarity=0.102 Sum_probs=188.7
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ ..|++|+.||+|++|| .++..++++.+|..+|.++.|+|++++|+|+|.|++ |++||+
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~---------i~vwd~ 84 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR---------IRVFNY 84 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE---------EEEEET
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCE---------EEEEEC
Confidence 4588888754 5899999999999999 778888999999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce-eEEecCCCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF-KLQVDNQCS 181 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~-~~~~~~~~~ 181 (823)
... .++.++..+ ..+ |++++|+|++.. +|+|+.||+|++|+.. .+... ..+..+..+
T Consensus 85 ~~~----------~~~~~~~~h--~~~---v~~~~~~~~~~~---l~sgs~D~~v~lWd~~----~~~~~~~~~~~h~~~ 142 (304)
T 2ynn_A 85 NTG----------EKVVDFEAH--PDY---IRSIAVHPTKPY---VLSGSDDLTVKLWNWE----NNWALEQTFEGHEHF 142 (304)
T ss_dssp TTC----------CEEEEEECC--SSC---EEEEEECSSSSE---EEEEETTSCEEEEEGG----GTTEEEEEECCCCSC
T ss_pred CCC----------cEEEEEeCC--CCc---EEEEEEcCCCCE---EEEECCCCeEEEEECC----CCcchhhhhcccCCc
Confidence 842 356666643 334 999999999999 9999999999999863 12122 234456889
Q ss_pred cceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccC--CCe-EEEee-CCeEEEEecCCCCcc
Q 037368 182 VMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD--RLE-LIIGR-PEAVYFYEVDGRGPC 256 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~--~~~-liv~~-~~~I~i~~~~g~~~~ 256 (823)
|++++|+|++. ..++++ .++.|++||+............+...+.++.++| ++. +++|+ ++.|++|+++.....
T Consensus 143 v~~v~~~p~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 143 VMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp EEEEEECTTCT-TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 99999998432 345554 4667999999754322233334555677777765 655 45554 459999999754333
Q ss_pred ccccCCe---EEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEec--cccceeEE-EeecCc--EEEEEcCCeEE
Q 037368 257 WAFEGEK---KLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL--VVKEVSHM-LCEWGN--IILVMTDKSVL 326 (823)
Q Consensus 257 ~~~~g~~---~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~--~i~~v~~v-~~~~~~--~~vvs~~~~v~ 326 (823)
..+++|. ..+.+ .+.++++++ .|++|+|||+.+....... ....+..+ +.+.++ +++.+.++.+.
T Consensus 222 ~~~~~h~~~v~~~~~~p~~~~l~s~s-----~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~ 296 (304)
T 2ynn_A 222 ATLEGHMSNVSFAVFHPTLPIIISGS-----EDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFT 296 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEE-----TTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEE
T ss_pred eeeCCCCCCEEEEEECCCCCEEEEEc-----CCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceE
Confidence 4566662 33444 466888877 4689999999876544332 22334444 344443 35555555544
Q ss_pred EE
Q 037368 327 CI 328 (823)
Q Consensus 327 ~l 328 (823)
.+
T Consensus 297 ~~ 298 (304)
T 2ynn_A 297 VL 298 (304)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=7.1e-23 Score=219.78 Aligned_cols=268 Identities=12% Similarity=0.127 Sum_probs=192.7
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .+|++|+.||.|++|+ .+++....+.+|...|.+++|+|++++|+|+|.|++ |++||+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~---------i~vwd~ 94 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKT---------LKIWDV 94 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE---------EEEEET
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCE---------EEEEEC
Confidence 3588888753 5899999999999999 678888899999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
... .+++++..+ ..+ |.+++|+|+++. +++|+.||+|++|+.. .+.....+..+..+|
T Consensus 95 ~~~----------~~~~~~~~~--~~~---v~~~~~~~~~~~---l~s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v 152 (312)
T 4ery_A 95 SSG----------KCLKTLKGH--SNY---VFCCNFNPQSNL---IVSGSFDESVRIWDVK----TGKCLKTLPAHSDPV 152 (312)
T ss_dssp TTC----------CEEEEEECC--SSC---EEEEEECSSSSE---EEEEETTSCEEEEETT----TCCEEEEECCCSSCE
T ss_pred CCC----------cEEEEEcCC--CCC---EEEEEEcCCCCE---EEEEeCCCcEEEEECC----CCEEEEEecCCCCcE
Confidence 842 366666533 334 999999999999 9999999999999863 122233444567899
Q ss_pred ceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEecCCCCccccc
Q 037368 183 MGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g~~~~~~~ 259 (823)
+++.|+++++ .++++ .++.|++||+............+...+.+++|+|++++++ ++ ++.|++|+.........+
T Consensus 153 ~~~~~~~~~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 153 SAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp EEEEECTTSS--EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCC--EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 9999999984 45555 4567999999764322222344556778899999987554 44 468999998743222344
Q ss_pred cCCe-----E--EEE-eeCcEEEEEEecCCCCccEEEEEeCCCCEEEE--eccccceeEE-EeecCcEEEEEc--CCeEE
Q 037368 260 EGEK-----K--LLG-WFRGYLLCVIADQRNSKNIFNVYDLKNRLIAH--SLVVKEVSHM-LCEWGNIILVMT--DKSVL 326 (823)
Q Consensus 260 ~g~~-----~--~i~-~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~--~~~i~~v~~v-~~~~~~~~vvs~--~~~v~ 326 (823)
.++. . ... ..+.++++++ .+++|++||+.++.+.. ..+-..+..+ +++.+.+++.++ .+..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~sg~-----~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 231 TGHKNEKYCIFANFSVTGGKWIVSGS-----EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp CSSCCSSSCCCEEEECSSSCEEEECC-----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred EecCCceEEEEEEEEeCCCcEEEEEC-----CCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE
Confidence 4431 1 112 1355776665 46899999998765543 2333334444 667777776654 34566
Q ss_pred EEeec
Q 037368 327 CIGEK 331 (823)
Q Consensus 327 ~l~~~ 331 (823)
+++..
T Consensus 306 ~~W~~ 310 (312)
T 4ery_A 306 KLWKS 310 (312)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 67654
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.92 E-value=1.6e-22 Score=218.32 Aligned_cols=266 Identities=11% Similarity=0.096 Sum_probs=193.4
Q ss_pred CeEEEeeCC---CEEEEEecCCeEEEEcCC------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeE
Q 037368 27 NITCCSSGR---GKVVIGCDDGAVSLLDRG------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCL 97 (823)
Q Consensus 27 ~is~~~~~~---~~l~~gs~dG~i~~~d~~------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~v 97 (823)
.|+|+++++ ..|++|+.||+|++|+.. +..+++|++|...|.+++|+|+|++|+|+|.|++ |
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~---------v 89 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT---------L 89 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE---------E
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE---------E
Confidence 488877643 589999999999999822 3457789999999999999999999999999998 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+|||+... .+++++..+ ..+ |++++|+|++.. +++|+.||+|++|+.. +.....+..
T Consensus 90 ~~wd~~~~----------~~~~~~~~h--~~~---v~~~~~~~~~~~---l~s~s~D~~i~vwd~~-----~~~~~~~~~ 146 (319)
T 3frx_A 90 RLWDVATG----------ETYQRFVGH--KSD---VMSVDIDKKASM---IISGSRDKTIKVWTIK-----GQCLATLLG 146 (319)
T ss_dssp EEEETTTT----------EEEEEEECC--SSC---EEEEEECTTSCE---EEEEETTSCEEEEETT-----SCEEEEECC
T ss_pred EEEECCCC----------CeeEEEccC--CCc---EEEEEEcCCCCE---EEEEeCCCeEEEEECC-----CCeEEEEec
Confidence 99999842 356666533 334 999999999999 9999999999999862 333444556
Q ss_pred CCCCcceEEEeecCC----eEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEec
Q 037368 178 NQCSVMGLGFRVDGQ----ALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEV 250 (823)
Q Consensus 178 ~~~~It~l~fs~dg~----~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~ 250 (823)
+.++|+++.|+|.+. ...++++ .++.|++||+... .....+.+|...+.+++|+|+|++++ ++ ++.|++|++
T Consensus 147 h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 147 HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225 (319)
T ss_dssp CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 788999999988532 1244444 4567999999753 34556678888999999999998554 44 468999998
Q ss_pred CCCCccccccCC--eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEec--cc--------cceeEE-EeecCc
Q 037368 251 DGRGPCWAFEGE--KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL--VV--------KEVSHM-LCEWGN 315 (823)
Q Consensus 251 ~g~~~~~~~~g~--~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~--~i--------~~v~~v-~~~~~~ 315 (823)
........+.++ ...+++ .+.++++.+. ..+++|++..+...... .. ..+..+ ++++|.
T Consensus 226 ~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 226 AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp TTTEEEEEEECCSCEEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence 754333344333 344444 4566666542 46999999887654322 11 113333 788888
Q ss_pred EEEEEcCCeEEEEeec
Q 037368 316 IILVMTDKSVLCIGEK 331 (823)
Q Consensus 316 ~~vvs~~~~v~~l~~~ 331 (823)
.++.++.+..++++..
T Consensus 300 ~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 300 TLFAGYTDNVIRVWQV 315 (319)
T ss_dssp EEEEEETTSCEEEEEE
T ss_pred EEEEeecCceEEEEEE
Confidence 8888776666777654
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.92 E-value=2.6e-22 Score=218.70 Aligned_cols=268 Identities=14% Similarity=0.096 Sum_probs=194.1
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .+|++|+.||+|++|| .+++.+.++..|...|.+++|+|+|++|+|+|.|++ |++|++
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~---------v~iw~~ 126 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI---------CSIYNL 126 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCE---------EEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCe---------EEEEEC
Confidence 4588888753 5899999999999999 778888899999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
.... +.....+.+..+ ..+ |++++|+|++ . +++|+.||+|++|+.. .+.....+..+.++|
T Consensus 127 ~~~~------~~~~~~~~~~~h--~~~---v~~~~~~~~~-~---l~s~s~d~~i~~wd~~----~~~~~~~~~~h~~~v 187 (340)
T 1got_B 127 KTRE------GNVRVSRELAGH--TGY---LSCCRFLDDN-Q---IVTSSGDTTCALWDIE----TGQQTTTFTGHTGDV 187 (340)
T ss_dssp TTCS------BSCEEEEEEECC--SSC---EEEEEEEETT-E---EEEEETTSCEEEEETT----TTEEEEEECCCSSCE
T ss_pred ccCC------CcceeEEEecCC--Ccc---EEEEEECCCC-c---EEEEECCCcEEEEECC----CCcEEEEEcCCCCce
Confidence 7532 112233444422 334 9999999885 5 7889999999999863 222233444567899
Q ss_pred ceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCccccc
Q 037368 183 MGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~ 259 (823)
++++|+|+++ .++++ .++.|++||+... .....+..|...+.+++|+|++.++ +|+ ++.|++|+++.......+
T Consensus 188 ~~~~~~~~~~--~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 188 MSLSLAPDTR--LFVSGACDASAKLWDVREG-MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEEECTTSS--EEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCC--EEEEEeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 9999999984 45544 4667999999754 3566777888899999999988754 454 458999998743322222
Q ss_pred --cC---CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE--EeccccceeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 260 --EG---EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA--HSLVVKEVSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 260 --~g---~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~--~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
++ ....++| .+.++++++ .+++|+|||+.+.... +..+-..|..+ +++++..++.++.+..+++|
T Consensus 265 ~~~~~~~~v~~~~~s~~g~~l~~g~-----~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 265 SHDNIICGITSVSFSKSGRLLLAGY-----DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ccCCcccceEEEEECCCCCEEEEEC-----CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 22 1334444 567888887 4589999998764332 33343345555 67777777766655566665
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.91 E-value=1e-22 Score=222.56 Aligned_cols=234 Identities=11% Similarity=0.026 Sum_probs=171.2
Q ss_pred CCCeEEEee-CCCEEEEEecCCeEEEEc-CCCeeeE----eEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 25 SGNITCCSS-GRGKVVIGCDDGAVSLLD-RGLKFNF----GFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 25 ~~~is~~~~-~~~~l~~gs~dG~i~~~d-~~~~~~~----~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...|+|+++ +++.+++|+.||+|++|| .+++.+. .+.+|++.|++++|+|+|++|+|+|.|++ |+
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~---------i~ 152 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC---------IK 152 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC---------EE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe---------EE
Confidence 345877765 568999999999999999 6665433 34589999999999999999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccccceeEEe-
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERITRFKLQV- 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~- 176 (823)
|||+.+ ..+++++..| ..+ |++++|+|++. . +|+|+.||+|++|+.. .+.....+.
T Consensus 153 iwd~~~----------~~~~~~~~~h--~~~---V~~~~~~~~~~~~---l~s~s~D~~v~iwd~~----~~~~~~~~~~ 210 (344)
T 4gqb_B 153 VWDLAQ----------QVVLSSYRAH--AAQ---VTCVAASPHKDSV---FLSCSEDNRILLWDTR----CPKPASQIGC 210 (344)
T ss_dssp EEETTT----------TEEEEEECCC--SSC---EEEEEECSSCTTE---EEEEETTSCEEEEETT----SSSCEEECC-
T ss_pred EEECCC----------CcEEEEEcCc--CCc---eEEEEecCCCCCc---eeeecccccccccccc----ccceeeeeec
Confidence 999984 2366666533 334 99999999985 5 7899999999999863 111222221
Q ss_pred -cCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCC-eE-EEee-CCeEEEEecC
Q 037368 177 -DNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRL-EL-IIGR-PEAVYFYEVD 251 (823)
Q Consensus 177 -~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~-~l-iv~~-~~~I~i~~~~ 251 (823)
.+...|++++|+|++. .++++++ ++.|++||+... .+...+..|...+.+++|+|++ ++ ++|+ |++|++||..
T Consensus 211 ~~~~~~~~~~~~~p~~~-~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQS-EVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp ---CCCEEEEEECSSCT-TEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ceeeccceeeeecCCCC-cceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 2356799999998764 3555554 567999999754 3667788898999999999987 44 4554 4689999987
Q ss_pred CCCccccccCC---eEEEEe--eCcEEE-EEEecCCCCccEEEEEeCCCCEE
Q 037368 252 GRGPCWAFEGE---KKLLGW--FRGYLL-CVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 252 g~~~~~~~~g~---~~~i~~--~~~ylv-~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
. +.+..+.|| ...++| .+.+++ +++ .|++|++|++..+.+
T Consensus 289 ~-~~~~~~~~H~~~V~~v~~sp~~~~llas~s-----~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 289 L-SELFRSQAHRDFVRDATWSPLNHSLLTTVG-----WDHQVVHHVVPTEPL 334 (344)
T ss_dssp C-CEEEEECCCSSCEEEEEECSSSTTEEEEEE-----TTSCEEEEECCC---
T ss_pred C-CcEEEEcCCCCCEEEEEEeCCCCeEEEEEc-----CCCeEEEEECCCCCC
Confidence 4 455566666 456666 455554 455 468999999987544
No 9
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=1.8e-20 Score=228.18 Aligned_cols=155 Identities=15% Similarity=0.103 Sum_probs=124.4
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
...|+|++.++ .+|++|+.+|.|++|| .+++.++++.+|.++|.+++|+|+|++|+++|.||+ |+|||
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~---------i~vw~ 83 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR---------IRVFN 83 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE---------EEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCe---------EEEEE
Confidence 34588888764 5899999999999999 788999999999999999999999999999999998 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS 181 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~ 181 (823)
+... .++.++..+ ..+ |++++|+|++.. +++|+.||+|++|+..- .......+..+..+
T Consensus 84 ~~~~----------~~~~~~~~~--~~~---v~~~~~s~~~~~---l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~~ 142 (814)
T 3mkq_A 84 YNTG----------EKVVDFEAH--PDY---IRSIAVHPTKPY---VLSGSDDLTVKLWNWEN---NWALEQTFEGHEHF 142 (814)
T ss_dssp TTTC----------CEEEEEECC--SSC---EEEEEECSSSSE---EEEEETTSEEEEEEGGG---TSEEEEEEECCSSC
T ss_pred CCCC----------cEEEEEecC--CCC---EEEEEEeCCCCE---EEEEcCCCEEEEEECCC---CceEEEEEcCCCCc
Confidence 9842 255555533 334 999999999999 99999999999998641 11223344456789
Q ss_pred cceEEEee-cCCeEEEEEEc-CCeEEEEEecC
Q 037368 182 VMGLGFRV-DGQALQLFAVT-PNSVILFSLQN 211 (823)
Q Consensus 182 It~l~fs~-dg~~~~l~~~t-~~~V~~~d~~~ 211 (823)
|++++|+| ++ ..+++++ ++.|++|++.+
T Consensus 143 v~~~~~~p~~~--~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 143 VMCVAFNPKDP--STFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EEEEEEETTEE--EEEEEEETTSEEEEEETTC
T ss_pred EEEEEEEcCCC--CEEEEEeCCCeEEEEECCC
Confidence 99999999 66 3455554 56799999854
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.91 E-value=1e-21 Score=215.34 Aligned_cols=273 Identities=11% Similarity=0.074 Sum_probs=195.9
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ ..|++|+.||+|++|| .+++....+..|...|.+++|+|+|+.|+|+|.|++ +++|++
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~---------i~v~~~ 135 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNK---------CSVYPL 135 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSE---------EEEEEC
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCC---------EEEEEE
Confidence 3488888753 5899999999999999 677888889999999999999999999999999998 999998
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
..... .+.......+..+ ..+ |++++|+|++.. +++|+.||+|++|+.. .+.....+..+..+|
T Consensus 136 ~~~~~----~~~~~~~~~~~~h--~~~---v~~~~~~~~~~~---l~t~s~D~~v~lwd~~----~~~~~~~~~~h~~~v 199 (354)
T 2pbi_B 136 TFDKN----ENMAAKKKSVAMH--TNY---LSACSFTNSDMQ---ILTASGDGTCALWDVE----SGQLLQSFHGHGADV 199 (354)
T ss_dssp CCCTT----CCSGGGCEEEEEC--SSC---EEEEEECSSSSE---EEEEETTSEEEEEETT----TCCEEEEEECCSSCE
T ss_pred ecccc----ccccccceeeecc--CCc---EEEEEEeCCCCE---EEEEeCCCcEEEEeCC----CCeEEEEEcCCCCCe
Confidence 74321 0111123344433 334 999999999999 9999999999999863 222334455667899
Q ss_pred ceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEee-CCeEEEEecCCCCccccc
Q 037368 183 MGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGR-PEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~-~~~I~i~~~~g~~~~~~~ 259 (823)
++++|+++.....++++ .++.|++||+... .+...+..|...+++++|+|++.+ ++++ ++.|++|+++.......+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 99999875311345555 4667999999764 356677788889999999998875 4554 468999998743222222
Q ss_pred cC-----CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE-EE-EeccccceeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 260 EG-----EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL-IA-HSLVVKEVSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 260 ~g-----~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~-i~-~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
.. ....+.+ .+.++++++ .+++|+|||+.++. +. +..+-..+..+ +++++..++.++.+..++++
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~-----~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGY-----NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEE-----TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred cCCCcccceeEEEEeCCCCEEEEEE-----CCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 21 1233444 577888877 45899999996543 22 23333345555 77888877777666666665
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.90 E-value=2.7e-22 Score=224.69 Aligned_cols=230 Identities=9% Similarity=0.090 Sum_probs=176.9
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|.|++++ +..|++|+.||+|++|| .++++++++.+|...|.+++|+|++++|+|+|.|++ |++||+
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~---------i~~wd~ 221 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT---------IKMWEV 221 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSE---------EEEEET
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe---------EEEEEC
Confidence 358888765 35899999999999999 778889999999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
... .++.++..+ ..+ |.+++++|++.. +|+|+.||+|++|+.. .+.....+..+..+|
T Consensus 222 ~~~----------~~~~~~~~h--~~~---v~~~~~~~~g~~---l~s~s~D~~v~vwd~~----~~~~~~~~~~h~~~v 279 (410)
T 1vyh_C 222 QTG----------YCVKTFTGH--REW---VRMVRPNQDGTL---IASCSNDQTVRVWVVA----TKECKAELREHRHVV 279 (410)
T ss_dssp TTC----------CEEEEEECC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----TCCEEEEECCCSSCE
T ss_pred CCC----------cEEEEEeCC--Ccc---EEEEEECCCCCE---EEEEcCCCeEEEEECC----CCceeeEecCCCceE
Confidence 842 367776633 233 999999999999 9999999999999863 122233345667899
Q ss_pred ceEEEeecCC------------------eEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-
Q 037368 183 MGLGFRVDGQ------------------ALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR- 241 (823)
Q Consensus 183 t~l~fs~dg~------------------~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~- 241 (823)
++++|+|++. ...+++++ ++.|++||+... .+...+.+|...+.+++|+|+|.++ +|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEECSSSSCEEEEET
T ss_pred EEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCCcEEEEEEcCCCCEEEEEeC
Confidence 9999998631 12455554 567999999753 3556677888889999999998754 444
Q ss_pred CCeEEEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeC
Q 037368 242 PEAVYFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 242 ~~~I~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
++.|++|+.........+.+| ...++| .+.++++++ .|++|+|||+
T Consensus 359 D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs-----~D~~i~vW~~ 409 (410)
T 1vyh_C 359 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS-----VDQTVKVWEC 409 (410)
T ss_dssp TTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEE-----TTSEEEEEC-
T ss_pred CCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEe-----CCCcEEEEeC
Confidence 458999998743333455555 445555 456888887 4689999985
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.9e-22 Score=213.99 Aligned_cols=279 Identities=12% Similarity=0.129 Sum_probs=185.9
Q ss_pred CCeEEEeeCCCEEEEEecCCeEEEEc-CC--CeeeEeE-ee-cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEE
Q 037368 26 GNITCCSSGRGKVVIGCDDGAVSLLD-RG--LKFNFGF-QA-HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs~dG~i~~~d-~~--~~~~~~~-~~-H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
..|.|+.++++.|++|+.||+|++|+ .. .+....+ .+ |.+.|.+++|+|++++|+|+|.|++ |+||
T Consensus 15 ~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~---------v~iw 85 (330)
T 2hes_X 15 EKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST---------VSIW 85 (330)
T ss_dssp SCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC---------EEEE
T ss_pred CceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc---------EEEE
Confidence 45888888777999999999999999 33 2555566 44 9999999999999999999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCC
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQC 180 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~ 180 (823)
|+..... ......++.++..+ ..+ |++++|+|+++. +|+|+.||+|++|+..-..........+..+..
T Consensus 86 ~~~~~~~---~~~~~~~~~~~~~h--~~~---V~~v~~sp~g~~---las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 86 AKEESAD---RTFEMDLLAIIEGH--ENE---VKGVAWSNDGYY---LATCSRDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp EC----------CCCEEEEEEC------C---EEEEEECTTSCE---EEEEETTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred EcccCcC---ccccceeEEEEcCC--CCc---EEEEEECCCCCE---EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 9863210 00112344455433 334 999999999999 999999999999986310000011233445678
Q ss_pred CcceEEEeecCCeEEEEEEc-CCeEEEEEecCCC-CcceEEccCCCccceecccCC--Ce-EEEee-CCeEEEEecCCCC
Q 037368 181 SVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQP-PKRQFLDNIGCSTNSVAMSDR--LE-LIIGR-PEAVYFYEVDGRG 254 (823)
Q Consensus 181 ~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~-~~~~~l~~~~~~~~~~~~s~~--~~-liv~~-~~~I~i~~~~g~~ 254 (823)
+|++++|+|++. .|++++ ++.|++|+..... .+...+.+|...+.++.|+|+ +. +++++ |++|++|++.+..
T Consensus 155 ~v~~v~~~p~~~--~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 155 DVKHVIWHPSEA--LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDD 232 (330)
T ss_dssp CEEEEEECSSSS--EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEEC
T ss_pred ceEEEEECCCCC--EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCC
Confidence 999999999984 555554 5679999986432 355677788889999999997 54 55555 4589999976321
Q ss_pred -------cc-ccccC-C---eEEEEee-CcEEEEEEecCCCCccEEEEEeCCCCE---EEE--ecccc-ceeEE-Eee--
Q 037368 255 -------PC-WAFEG-E---KKLLGWF-RGYLLCVIADQRNSKNIFNVYDLKNRL---IAH--SLVVK-EVSHM-LCE-- 312 (823)
Q Consensus 255 -------~~-~~~~g-~---~~~i~~~-~~ylv~~s~d~~~~~~~I~I~D~~~~~---i~~--~~~i~-~v~~v-~~~-- 312 (823)
.+ ..+.+ | ...++|. +.++++++ .+++|+|||..++. +.. ..+-. .+..+ +++
T Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~-----~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 233 EDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVG-----ADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp TTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEE-----TTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred ccccceeEEeeecccccccceEEEEEcCCCEEEEEe-----CCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 11 12222 2 4456664 34666666 46899999987652 211 12222 34433 444
Q ss_pred cCcEEEEEcCCeEEEEeec
Q 037368 313 WGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 313 ~~~~~vvs~~~~v~~l~~~ 331 (823)
++.+++.++.+..++++..
T Consensus 308 ~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 308 GKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp --CCEEEEETTSEEEEEEC
T ss_pred CceEEEEecCCCcEEEEEe
Confidence 4566666666667777754
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.90 E-value=1.2e-21 Score=213.66 Aligned_cols=265 Identities=10% Similarity=0.012 Sum_probs=184.3
Q ss_pred CCeEEEee--------CCCEEEEEecCCeEEEEc-CC-------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCc
Q 037368 26 GNITCCSS--------GRGKVVIGCDDGAVSLLD-RG-------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVS 89 (823)
Q Consensus 26 ~~is~~~~--------~~~~l~~gs~dG~i~~~d-~~-------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~ 89 (823)
..|+|+++ .+..|++|+.||+|++|| .+ +...+.+.+|...|.+++|+|++.+|+|+|.|++
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~-- 99 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKT-- 99 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSE--
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCc--
Confidence 34888876 335899999999999999 32 3456789999999999999999999999999998
Q ss_pred ccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccc
Q 037368 90 AQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI 169 (823)
Q Consensus 90 ~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~ 169 (823)
|+|||+... .+++++..+ ..+ |++++|+|+++. +|+|+.||+|++|+.. +
T Consensus 100 -------v~lwd~~~~----------~~~~~~~~h--~~~---v~~v~~sp~~~~---l~s~~~d~~i~~wd~~-----~ 149 (343)
T 2xzm_R 100 -------LRLWDLRTG----------TTYKRFVGH--QSE---VYSVAFSPDNRQ---ILSAGAEREIKLWNIL-----G 149 (343)
T ss_dssp -------EEEEETTSS----------CEEEEEECC--CSC---EEEEEECSSTTE---EEEEETTSCEEEEESS-----S
T ss_pred -------EEEEECCCC----------cEEEEEcCC--CCc---EEEEEECCCCCE---EEEEcCCCEEEEEecc-----C
Confidence 999999842 356666533 334 999999999999 9999999999999863 1
Q ss_pred cceeEEe---cCCCCcceEEEeecCC---------eEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeE
Q 037368 170 TRFKLQV---DNQCSVMGLGFRVDGQ---------ALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL 237 (823)
Q Consensus 170 ~k~~~~~---~~~~~It~l~fs~dg~---------~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l 237 (823)
....... .+..+|++++|+|++. ..++..+.++.|++||... .....+..|...+.+++|+|+|++
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCE
Confidence 1111111 3467899999999862 1334444566799999542 345566778888999999999975
Q ss_pred E-Eee-CCeEEEEecCCCCcc-ccc--cCCeEEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEE----EEe------
Q 037368 238 I-IGR-PEAVYFYEVDGRGPC-WAF--EGEKKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLI----AHS------ 300 (823)
Q Consensus 238 i-v~~-~~~I~i~~~~g~~~~-~~~--~g~~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i----~~~------ 300 (823)
+ +|+ ++.|++|++...... ..+ ......++|. +.+++ ++. ++.|+|||+.++.. .+.
T Consensus 228 l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la-~~~-----d~~v~iw~~~~~~~~~~~~~~~~~~~~ 301 (343)
T 2xzm_R 228 IATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVA-VGT-----DQGVKIFNLMTQSKAPVCTIEAEPITK 301 (343)
T ss_dssp EEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEE-EEE-----SSCEEEEESSSCCSCSEEECCCCSGGG
T ss_pred EEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEE-EEC-----CCCEEEEEeCCCCCCceEEeecCcchh
Confidence 5 444 468999998433222 222 2224455553 44554 333 46899999976431 111
Q ss_pred -----ccccceeEE-EeecCcEEEEEcCCeEEEEee
Q 037368 301 -----LVVKEVSHM-LCEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 301 -----~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~ 330 (823)
.+...+..+ +++.+..++.++.+..++++.
T Consensus 302 ~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 302 AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 111224444 677777777766555666664
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.90 E-value=4.4e-22 Score=215.28 Aligned_cols=227 Identities=14% Similarity=0.083 Sum_probs=175.7
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.|.|+...+ ..+++|+.||+|++|| .+++.++++.+|...|.+++|+|++++|++++.|++ |++|++.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~---------v~i~~~~ 152 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK---------VNIFGVE 152 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSE---------EEEEETT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCc---------EEEEEcC
Confidence 477777643 5789999999999999 788999999999999999999999999999999998 9999998
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcc
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVM 183 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It 183 (823)
.. .....+..+ ..+ |.+++|+|+++. +|+|+.||.|++|+.. .+.....+..+..+|+
T Consensus 153 ~~----------~~~~~~~~~--~~~---v~~~~~spdg~~---lasg~~dg~i~iwd~~----~~~~~~~~~~h~~~v~ 210 (321)
T 3ow8_A 153 SG----------KKEYSLDTR--GKF---ILSIAYSPDGKY---LASGAIDGIINIFDIA----TGKLLHTLEGHAMPIR 210 (321)
T ss_dssp TC----------SEEEEEECS--SSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----TTEEEEEECCCSSCCC
T ss_pred CC----------ceeEEecCC--Cce---EEEEEECCCCCE---EEEEcCCCeEEEEECC----CCcEEEEEcccCCcee
Confidence 43 234444422 233 999999999999 9999999999999863 2222333445678999
Q ss_pred eEEEeecCCeEEEEEEcC-CeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcccccc
Q 037368 184 GLGFRVDGQALQLFAVTP-NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFE 260 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t~-~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~ 260 (823)
+++|+|+++ .|++++. +.|++||+... .....+.+|...+.+++|+|++.++ +++ ++.|++|++........+.
T Consensus 211 ~l~~spd~~--~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 211 SLTFSPDSQ--LLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp EEEECTTSC--EEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEcCCCC--EEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 999999984 5666654 56999999754 3556777888889999999988755 444 4689999987443334455
Q ss_pred CC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeC
Q 037368 261 GE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 261 g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
+| ...++| .+.+|++++ .+++|+|||.
T Consensus 288 ~h~~~v~~v~~s~~g~~l~s~~-----~d~~i~vwd~ 319 (321)
T 3ow8_A 288 DHQDQVWGVKYNGNGSKIVSVG-----DDQEIHIYDC 319 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE-----TTCCEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEe-----CCCeEEEEeC
Confidence 54 445666 456888877 4589999995
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.90 E-value=1e-21 Score=214.54 Aligned_cols=277 Identities=12% Similarity=0.114 Sum_probs=187.5
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEc-CCCeee--Ee-EeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEE
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFN--FG-FQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~--~~-~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
.|.++++++ ..|++|+.||+|++|| .++... .. ..+|...|.+++|+|+|++|+|+|.|++ |+||
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~---------v~iw 88 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT---------TCIW 88 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC---------EEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc---------EEEE
Confidence 576666643 5899999999999999 444422 12 3689999999999999999999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCC
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQC 180 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~ 180 (823)
++... ...++.++..+ ..+ |++++|+|+++. +|+|+.||+|++|+..-. ........+..+..
T Consensus 89 ~~~~~--------~~~~~~~~~~h--~~~---v~~v~~sp~~~~---l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~h~~ 151 (345)
T 3fm0_A 89 KKNQD--------DFECVTTLEGH--ENE---VKSVAWAPSGNL---LATCSRDKSVWVWEVDEE-DEYECVSVLNSHTQ 151 (345)
T ss_dssp EECCC---------EEEEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEEECTT-SCEEEEEEECCCCS
T ss_pred EccCC--------CeEEEEEccCC--CCC---ceEEEEeCCCCE---EEEEECCCeEEEEECCCC-CCeEEEEEecCcCC
Confidence 98742 22345555432 334 999999999999 999999999999986310 00011223345678
Q ss_pred CcceEEEeecCCeEEEEEE-cCCeEEEEEecCCC-CcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCc-
Q 037368 181 SVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQP-PKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGP- 255 (823)
Q Consensus 181 ~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~-~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~- 255 (823)
+|++++|+|+++ .|+++ .++.|++|+..... .....+.+|...+.+++|+|+|+++ +++ |+.|++|+....+.
T Consensus 152 ~v~~~~~~p~~~--~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 152 DVKHVVWHPSQE--LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp CEEEEEECSSSS--CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CeEEEEECCCCC--EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 999999999984 45555 45679999987542 2345677888899999999999755 444 46899998631111
Q ss_pred -------------c-ccccC-C---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCC---------EEEE--ecccc
Q 037368 256 -------------C-WAFEG-E---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNR---------LIAH--SLVVK 304 (823)
Q Consensus 256 -------------~-~~~~g-~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~---------~i~~--~~~i~ 304 (823)
+ ..+.+ | ...++| .+.++++++ .+++|+|||.... ...+ ..+-.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-----~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~ 304 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC-----GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQ 304 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE-----TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSS
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe-----CCCeEEEEEeCCCCCcceeeEEEEeeecccccC
Confidence 0 01222 2 234555 345777776 4589999998643 1111 12333
Q ss_pred ceeEE-EeecC-cEEEEEcCCeEEEEeecChHHH
Q 037368 305 EVSHM-LCEWG-NIILVMTDKSVLCIGEKDMESK 336 (823)
Q Consensus 305 ~v~~v-~~~~~-~~~vvs~~~~v~~l~~~~~~~~ 336 (823)
.|..+ +++.+ .+++.++.+..+++|......+
T Consensus 305 ~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 305 DVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred cEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 35555 66666 4777776666777776655443
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.90 E-value=1.9e-21 Score=208.29 Aligned_cols=241 Identities=12% Similarity=0.130 Sum_probs=178.0
Q ss_pred CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCce
Q 037368 54 LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKI 133 (823)
Q Consensus 54 ~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 133 (823)
.++.++|++|...|.+++|+|++++|+|+|.||+ |+|||+... .+++++..+ ..| |
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~---------v~lWd~~~~----------~~~~~~~~~--~~~---v 58 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGR---------VELWNYETQ----------VEVRSIQVT--ETP---V 58 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSE---------EEEEETTTT----------EEEEEEECC--SSC---E
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCc---------EEEEECCCC----------ceeEEeecc--CCc---E
Confidence 3556789999999999999999999999999998 999999742 356666543 345 9
Q ss_pred EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCC
Q 037368 134 TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQ 212 (823)
Q Consensus 134 ~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~ 212 (823)
.+++|+|+++. +|+|+.||+|++|+.. .+.....+..+.++|++++|+|+++ .+++++ ++.|++||+...
T Consensus 59 ~~~~~~~~~~~---l~s~s~d~~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~--~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 59 RAGKFIARKNW---IIVGSDDFRIRVFNYN----TGEKVVDFEAHPDYIRSIAVHPTKP--YVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp EEEEEEGGGTE---EEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEEGGGT
T ss_pred EEEEEeCCCCE---EEEECCCCEEEEEECC----CCcEEEEEeCCCCcEEEEEEcCCCC--EEEEECCCCeEEEEECCCC
Confidence 99999999999 9999999999999863 2333444556788999999999984 455554 567999999765
Q ss_pred CCcceEEccCCCccceecccC-CCe-EEEee-CCeEEEEecCCCCcccccc-CC---eEEEEe----eCcEEEEEEecCC
Q 037368 213 PPKRQFLDNIGCSTNSVAMSD-RLE-LIIGR-PEAVYFYEVDGRGPCWAFE-GE---KKLLGW----FRGYLLCVIADQR 281 (823)
Q Consensus 213 ~~~~~~l~~~~~~~~~~~~s~-~~~-liv~~-~~~I~i~~~~g~~~~~~~~-g~---~~~i~~----~~~ylv~~s~d~~ 281 (823)
......+.+|...+.|++|+| ++. +++|+ ++.|++|++....+...+. ++ ...+.+ .+.++++++
T Consensus 130 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s---- 205 (304)
T 2ynn_A 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---- 205 (304)
T ss_dssp TEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE----
T ss_pred cchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc----
Confidence 445567788888999999998 554 55655 5699999986443333332 22 233443 345888887
Q ss_pred CCccEEEEEeCCCCEEEE--eccccceeEE-EeecCcEEEEEcCCeEEEEeecC
Q 037368 282 NSKNIFNVYDLKNRLIAH--SLVVKEVSHM-LCEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 282 ~~~~~I~I~D~~~~~i~~--~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
.+++|+|||+.++.... ..+...+..+ +++.+.+++.++.+..++++...
T Consensus 206 -~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 206 -DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred -CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 46899999998765433 3444445554 67777777777766677777543
No 17
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=3.5e-22 Score=225.43 Aligned_cols=274 Identities=11% Similarity=0.024 Sum_probs=185.3
Q ss_pred CCeEEEeeCC---CEEEEEecCCeEEEEc-CCCe--eeEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSGR---GKVVIGCDDGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~~---~~l~~gs~dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|+++++ ..||+|+.||+|++|| .+++ ....+.+|.+.|++|+|+| ++++|+|+|.|++ |+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~---------v~ 190 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT---------TR 190 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC---------EE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE---------EE
Confidence 4599999864 4799999999999999 3333 4446778999999999998 6899999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecC
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDN 178 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~ 178 (823)
|||+... +.+.+.... ... ..+.+++|+|++.. +|+|+.||.|++|+.. +.....+..+
T Consensus 191 iwd~~~~-----------~~~~~~~~~-~~~-~~~~~~~~~~~~~~---l~~g~~dg~i~~wd~~-----~~~~~~~~~h 249 (435)
T 4e54_B 191 LQDFKGN-----------ILRVFASSD-TIN-IWFCSLDVSASSRM---VVTGDNVGNVILLNMD-----GKELWNLRMH 249 (435)
T ss_dssp EEETTSC-----------EEEEEECCS-SCS-CCCCCEEEETTTTE---EEEECSSSBEEEEESS-----SCBCCCSBCC
T ss_pred EeeccCC-----------ceeEEeccC-CCC-ccEEEEEECCCCCE---EEEEeCCCcEeeeccC-----cceeEEEecc
Confidence 9999742 333333221 111 23889999999999 9999999999999853 2222334456
Q ss_pred CCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCc--ceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCC
Q 037368 179 QCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPK--RQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGR 253 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~--~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~ 253 (823)
.++|++++|+|++. .+++++ .++.|++||+...... ......|...+.+++|+|+|.++ +++ ++.|++|++...
T Consensus 250 ~~~v~~v~~~p~~~-~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 250 KKKVTHVALNPCCD-WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp SSCEEEEEECTTCS-SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred cceEEeeeecCCCc-eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 78999999999875 355555 4567999998753321 12224677889999999998755 444 468999998632
Q ss_pred CccccccCC-----------eEEEEeeCcEEEEEEe-cCC------CCccEEEEEeCCCCEEEEe---ccccceeEE--E
Q 037368 254 GPCWAFEGE-----------KKLLGWFRGYLLCVIA-DQR------NSKNIFNVYDLKNRLIAHS---LVVKEVSHM--L 310 (823)
Q Consensus 254 ~~~~~~~g~-----------~~~i~~~~~ylv~~s~-d~~------~~~~~I~I~D~~~~~i~~~---~~i~~v~~v--~ 310 (823)
.....+.++ .....+.+.++++.+. ++. ..+++|+|||..++.+... .+...+..+ |
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~f 408 (435)
T 4e54_B 329 DCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEF 408 (435)
T ss_dssp SSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEE
T ss_pred ccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEE
Confidence 211122111 1122334455655532 221 2456899999987554332 233334433 6
Q ss_pred eecCcEEEEEcCCeEEEEeec
Q 037368 311 CEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 311 ~~~~~~~vvs~~~~v~~l~~~ 331 (823)
++++.+++.++++ -+++|..
T Consensus 409 spdg~~lasg~d~-~i~iW~~ 428 (435)
T 4e54_B 409 NPMGDTLASAMGY-HILIWSQ 428 (435)
T ss_dssp CTTSSCEEEECSS-EEEECCC
T ss_pred CCCCCEEEEEcCC-cEEEEEC
Confidence 7788887777665 4667643
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=2.5e-21 Score=225.98 Aligned_cols=261 Identities=15% Similarity=0.165 Sum_probs=196.6
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|.++++++ ..+++|+.||+|++||.++..+..+.+|...|.+++++|+|++|++++.|++ |++||..
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~---------v~~~~~~ 374 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKT---------VKLWNRN 374 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE---------EEEEETT
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCE---------EEEEcCC
Confidence 3577766643 5889999999999999777777889999999999999999999999999998 9999965
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcc
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVM 183 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It 183 (823)
. .++.++..+ ..+ |++++|+||++. +|+|+.||.|++|+.. +.....+..+..+|+
T Consensus 375 ~-----------~~~~~~~~~--~~~---v~~~~~s~dg~~---l~~~~~d~~v~~~~~~-----~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 375 G-----------QLLQTLTGH--SSS---VRGVAFSPDGQT---IASASDDKTVKLWNRN-----GQLLQTLTGHSSSVW 430 (577)
T ss_dssp C-----------CEEEEEECC--SSC---EEEEEECTTSSC---EEEEETTSEEEEECTT-----CCEEEEEECCSSCEE
T ss_pred C-----------CEEEEecCC--CCC---eEEEEECCCCCE---EEEEeCCCEEEEEeCC-----CCEEEEecCCCCCeE
Confidence 2 256565533 334 999999999999 9999999999999742 223344556688999
Q ss_pred eEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEecCCCCcccccc
Q 037368 184 GLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDGRGPCWAFE 260 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g~~~~~~~~ 260 (823)
+++|+|+++ .+++++ ++.|++|+..++ ....+..|...+.+++|+|++++++ ++ ++.|++|+..|+. ...+.
T Consensus 431 ~~~~s~d~~--~l~~~~~d~~v~~w~~~~~--~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~-~~~~~ 505 (577)
T 2ymu_A 431 GVAFSPDDQ--TIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTLT 505 (577)
T ss_dssp EEEECTTSS--EEEEEETTSEEEEEETTSC--EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCE-EEEEE
T ss_pred EEEECCCCC--EEEEEcCCCEEEEEECCCC--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCE-EEEEe
Confidence 999999984 455554 567999997643 4566777888999999999998654 44 4589999976542 23455
Q ss_pred CC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE-EeccccceeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 261 GE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA-HSLVVKEVSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 261 g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
+| ...+++ .+.+|++++ .+++|+|||..++.+. +..+-..|..+ |++++..++.++.+..+++|
T Consensus 506 ~h~~~v~~l~~s~dg~~l~s~~-----~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDGQTIASAS-----DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEE-----TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEE-----CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 55 344444 577888887 4589999998776653 34444445555 77888777665555555554
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.89 E-value=7.8e-22 Score=218.51 Aligned_cols=276 Identities=12% Similarity=0.066 Sum_probs=193.7
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .+|++|+.||+|++|| .+++...++++|...|.+++|+|+|++|+|+|.|++ ++|||+
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~---------v~iw~~ 137 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSA---------CSIFNL 137 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSC---------CEEEEC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCc---------EEEEEC
Confidence 3588888753 5899999999999999 778888899999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC-CCcceEEEEEeCCeEEEEEcccccccccceeEE-----e
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA-PPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-----V 176 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-----~ 176 (823)
...... .+...+.+++..+ ..+ |.+++|+|+. .. +++|+.||+|++|+.. .+.....+ .
T Consensus 138 ~~~~~~---~~~~~~~~~~~gh--~~~---v~~~~~~~~~~~~---l~s~s~D~~i~~wd~~----~~~~~~~~~~~~~~ 202 (380)
T 3iz6_a 138 SSQADR---DGNMPVSRVLTGH--KGY---ASSCQYVPDQETR---LITGSGDQTCVLWDVT----TGQRISIFGSEFPS 202 (380)
T ss_dssp CCCSSC---CCSSTTCCBCCCC--SSC---CCCCBCCSSSSSC---EEEECTTSCEEEECTT----TCCEEEEECCCSSS
T ss_pred CCCccc---cCCccceeeccCC--Ccc---eEEEEEecCCCCE---EEEECCCCcEEEEEcC----CCcEEEEeecccCC
Confidence 753210 0111122222222 223 8999999964 57 9999999999999863 22222222 2
Q ss_pred cCCCCcceEEEee-cCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCC
Q 037368 177 DNQCSVMGLGFRV-DGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDG 252 (823)
Q Consensus 177 ~~~~~It~l~fs~-dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g 252 (823)
.+..+|.++.|++ ++ ..++++ .++.|++||+.........+.+|...+++++|+|++.++ +|+ |++|++|++..
T Consensus 203 ~h~~~v~~~~~~~~~~--~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 203 GHTADVLSLSINSLNA--NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SCCSCEEEEEECSSSC--CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCccCeEEEEeecCCC--CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 3467899999976 44 345444 466799999975445667788888999999999998755 454 45899999874
Q ss_pred CCccccccCC----------eEEE--EeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEe------ccccceeEE-Eeec
Q 037368 253 RGPCWAFEGE----------KKLL--GWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHS------LVVKEVSHM-LCEW 313 (823)
Q Consensus 253 ~~~~~~~~g~----------~~~i--~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~------~~i~~v~~v-~~~~ 313 (823)
......+..+ ...+ ++.+.++++++ .+++|+|||+..+..... .+-..|..+ ++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-----~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-----SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSD 355 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC-----TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSS
T ss_pred CcEEEEecccccccccccCceEEEEECCCCCEEEEEE-----CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCC
Confidence 3221122111 2233 44678888876 458999999976544322 122225544 7788
Q ss_pred CcEEEEEcCCeEEEEeecC
Q 037368 314 GNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 314 ~~~~vvs~~~~v~~l~~~~ 332 (823)
+..++.++.+..+++|...
T Consensus 356 g~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 356 GSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SSEEEEECTTSCEEEEECC
T ss_pred CCEEEEeeCCCCEEEEecC
Confidence 8888887766677777543
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=1.8e-21 Score=213.70 Aligned_cols=280 Identities=8% Similarity=0.042 Sum_probs=179.6
Q ss_pred CeEEEeeCC--CEEEEEec------CCeEEEEc-CCCe----eeEeEeecccceeEEEEecCCCEEEEEecCCCCccccc
Q 037368 27 NITCCSSGR--GKVVIGCD------DGAVSLLD-RGLK----FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQS 93 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~------dG~i~~~d-~~~~----~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~ 93 (823)
.|+|+++++ .+|++|+. ||.|++|+ .++. ......+|...|++++|+|++. ++++|.||+
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~------ 116 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGA------ 116 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSC------
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCE------
Confidence 488887643 47899987 78999998 4443 2334567999999999999875 556788998
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccccee
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~ 173 (823)
|+|||+.... +.....+....+..+ |++++|+|+++. +|+|+.||+|++|+.. .+....
T Consensus 117 ---v~lWd~~~~~--------~~~~~~~~~~~h~~~---V~~v~~spdg~~---l~sgs~dg~v~iwd~~----~~~~~~ 175 (357)
T 4g56_B 117 ---VELWEILEKE--------SLLVNKFAKYEHDDI---VKTLSVFSDGTQ---AVSGGKDFSVKVWDLS----QKAVLK 175 (357)
T ss_dssp ---EEEC----------------CCCCEEECCCSSC---EEEEEECSSSSE---EEEEETTSCEEEEETT----TTEEEE
T ss_pred ---EEEeeccccc--------eeEEEeeccCCCCCC---EEEEEECCCCCE---EEEEeCCCeEEEEECC----CCcEEE
Confidence 9999997532 111112222222334 999999999999 9999999999999863 222233
Q ss_pred EEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEE--ccCCCccceecccCCC-e-EEEee-CCeEEEE
Q 037368 174 LQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFL--DNIGCSTNSVAMSDRL-E-LIIGR-PEAVYFY 248 (823)
Q Consensus 174 ~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l--~~~~~~~~~~~~s~~~-~-liv~~-~~~I~i~ 248 (823)
.+..+.++|++++|++++...++..+.++.|++||+.... +...+ ..+...+.+++|+|++ . +++|. ++.|++|
T Consensus 176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc-eeeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 3445678999999999874234444456779999987543 22222 3455667899999864 4 44554 4589999
Q ss_pred ecCCCCccccccCC---eEEEEe--eC-cEEEEEEecCCCCccEEEEEeCCCCEEEEe-ccccceeEE-Eee-cCcEEEE
Q 037368 249 EVDGRGPCWAFEGE---KKLLGW--FR-GYLLCVIADQRNSKNIFNVYDLKNRLIAHS-LVVKEVSHM-LCE-WGNIILV 319 (823)
Q Consensus 249 ~~~g~~~~~~~~g~---~~~i~~--~~-~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~-~~i~~v~~v-~~~-~~~~~vv 319 (823)
++........+.++ ...++| .+ .+|++++ .|++|+|||+.++.+... .+-..|..+ |++ ++.+++.
T Consensus 255 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs-----~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 255 NIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS-----EDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp ESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE-----TTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred ECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe-----CCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEE
Confidence 98743333455554 345665 34 4677776 468999999988765543 233336655 665 5667776
Q ss_pred EcCCeEEEEeecChHHHHHHH
Q 037368 320 MTDKSVLCIGEKDMESKLDML 340 (823)
Q Consensus 320 s~~~~v~~l~~~~~~~~i~~L 340 (823)
++.+..++++..+...+.+-+
T Consensus 330 ~s~Dg~v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 330 VGWDHKVLHHHLPSEGRTENL 350 (357)
T ss_dssp EETTSCEEEEECC--------
T ss_pred EcCCCeEEEEECCCCCccccc
Confidence 665556677766655544433
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.89 E-value=2e-21 Score=211.91 Aligned_cols=229 Identities=13% Similarity=0.178 Sum_probs=168.8
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.|+|+++++ .++++|+.||+|++|| .+++.+++|.+|.+.|.+++|+|++++|+|+|.|++ |++||+.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~---------i~~wd~~ 148 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE---------IKLWNIL 148 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSC---------EEEEESS
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE---------EEEEecc
Confidence 477777643 5889999999999999 788888999999999999999999999999999998 9999997
Q ss_pred CCCCCCCCCCCCceEEEEEec-cCCCCCCceEEEEEecCC----------CCcceEEEEEeCCeEEEEEcccccccccce
Q 037368 104 KMEPEGTSSTSPDCIGILRVF-TSQFPEAKITSFLVLEEA----------PPILLIAIGLDNGCIYCIKGDIARERITRF 172 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~v~~va~~~d~----------~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~ 172 (823)
.. +....... .+. ..|++++|+|++ .. +|+|+.||+|++|+.. ....
T Consensus 149 ~~-----------~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~---l~s~~~d~~i~iwd~~-----~~~~ 206 (343)
T 2xzm_R 149 GE-----------CKFSSAEKENHS---DWVSCVRYSPIMKSANKVQPFAPY---FASVGWDGRLKVWNTN-----FQIR 206 (343)
T ss_dssp SC-----------EEEECCTTTSCS---SCEEEEEECCCCCSCSCCCSSCCE---EEEEETTSEEEEEETT-----TEEE
T ss_pred CC-----------ceeeeecccCCC---ceeeeeeeccccccccccCCCCCE---EEEEcCCCEEEEEcCC-----Ccee
Confidence 31 22111100 112 339999999987 56 9999999999999842 1222
Q ss_pred eEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeCCeEEEEec
Q 037368 173 KLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRPEAVYFYEV 250 (823)
Q Consensus 173 ~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~~~I~i~~~ 250 (823)
..+..+.++|++++|+|+|+ .|+++ .++.|++||+.....+...+. ++..+.+++|+|++++++ +.+++|++|++
T Consensus 207 ~~~~~h~~~v~~~~~s~~g~--~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 207 YTFKAHESNVNHLSISPNGK--YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNL 283 (343)
T ss_dssp EEEECCSSCEEEEEECTTSS--EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEES
T ss_pred EEEcCccccceEEEECCCCC--EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEe
Confidence 33445678999999999995 45555 456799999854333444443 456689999999998765 55679999998
Q ss_pred CCCCccc--ccc-----------CC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 251 DGRGPCW--AFE-----------GE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 251 ~g~~~~~--~~~-----------g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
....... .++ ++ ...++| .+.+|++++ .|++|++||+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~-----~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 284 MTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF-----TDGVIRTFSFET 340 (343)
T ss_dssp SSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE-----TTSEEEEEEEEE
T ss_pred CCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec-----CCceEEEEEEEc
Confidence 6432111 221 33 345555 467888887 468999999754
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.89 E-value=4.1e-21 Score=230.10 Aligned_cols=267 Identities=15% Similarity=0.096 Sum_probs=190.9
Q ss_pred CCeEEEeeCC---CEEEEEecCCeEEEEc-CC-----CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 26 GNITCCSSGR---GKVVIGCDDGAVSLLD-RG-----LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 26 ~~is~~~~~~---~~l~~gs~dG~i~~~d-~~-----~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
..|+|++++. +.|++|+.||+|++|+ .. +...+.+.+|...|.+++|+|+|++|+|+|.|++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~--------- 453 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE--------- 453 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE---------
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc---------
Confidence 3488888752 5799999999999998 22 3456789999999999999999999999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
|+|||+... .+++.+..| ..+ |++++|+|+++. +++|+.||+|++|+.. +.....+.
T Consensus 454 v~vwd~~~~----------~~~~~~~~h--~~~---v~~~~~s~~~~~---l~s~s~D~~i~iwd~~-----~~~~~~~~ 510 (694)
T 3dm0_A 454 LRLWDLAAG----------VSTRRFVGH--TKD---VLSVAFSLDNRQ---IVSASRDRTIKLWNTL-----GECKYTIS 510 (694)
T ss_dssp EEEEETTTT----------EEEEEEECC--SSC---EEEEEECTTSSC---EEEEETTSCEEEECTT-----SCEEEEEC
T ss_pred EEEEECCCC----------cceeEEeCC--CCC---EEEEEEeCCCCE---EEEEeCCCEEEEEECC-----CCcceeec
Confidence 999999742 356666533 334 999999999999 9999999999999752 11111221
Q ss_pred ----cCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEe
Q 037368 177 ----DNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYE 249 (823)
Q Consensus 177 ----~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~ 249 (823)
.+...|++++|+|++....++++ .++.|++||+... .....+.+|...+.+++|+|+|.+++ ++ ++.|++|+
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 24678999999998632244444 4667999999754 35667778888999999999988654 44 46899999
Q ss_pred cCCCCccccccCC--eEEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEEEEecccc---------------------
Q 037368 250 VDGRGPCWAFEGE--KKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVK--------------------- 304 (823)
Q Consensus 250 ~~g~~~~~~~~g~--~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~--------------------- 304 (823)
+........+..+ ...+++. +.++++.+ ++.|+|||+.++.+.......
T Consensus 590 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (694)
T 3dm0_A 590 LAEGKKLYSLEANSVIHALCFSPNRYWLCAAT------EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI 663 (694)
T ss_dssp TTTTEEEECCBCSSCEEEEEECSSSSEEEEEE------TTEEEEEETTTTEEEEEECCCCC----------------CCC
T ss_pred CCCCceEEEecCCCcEEEEEEcCCCcEEEEEc------CCCEEEEECCCCCChhhhccccccccccccccccccCCceeE
Confidence 8743332333332 3445543 34444433 357999999887654322110
Q ss_pred ceeEE-EeecCcEEEEEcCCeEEEEeec
Q 037368 305 EVSHM-LCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 305 ~v~~v-~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
.+..+ +++++..++.++.+..++++..
T Consensus 664 ~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 664 YCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 02222 6778888888777777888753
No 23
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.89 E-value=7e-21 Score=214.45 Aligned_cols=299 Identities=13% Similarity=0.153 Sum_probs=197.3
Q ss_pred CCceeecccccccCCCCCCCCcCCCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCe-----------eeEeEeecc---
Q 037368 2 YQWRKFDFFEEKYGGKSTIPEEVSGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLK-----------FNFGFQAHS--- 64 (823)
Q Consensus 2 ~~w~~f~ff~~~~~~~~~~~~~~~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~-----------~~~~~~~H~--- 64 (823)
.+|+--++|..... .+.....|+|+++++ .+|++|+.||.|++|+ .+++ +...+++|.
T Consensus 10 ~~w~~~q~~~~~~~-----~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~ 84 (447)
T 3dw8_B 10 IQWCFSQVKGAVDD-----DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEF 84 (447)
T ss_dssp CCCEEEECCSCSSS-----CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEE
T ss_pred eeEEEEEecccccc-----cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccc
Confidence 46887777754221 122345798888754 5899999999999999 5444 577899998
Q ss_pred ---------cceeEEEEecCC--CEEEEEecCCCCcccccceeEEEEeCCCCCCC----------CC--------CCCCC
Q 037368 65 ---------SSVLFLQQLKQR--NFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE----------GT--------SSTSP 115 (823)
Q Consensus 65 ---------~~V~~i~~~~~~--~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~----------~~--------~~~~~ 115 (823)
+.|++++|+|++ ..|+|+|.|++ |++||+...... +. ....|
T Consensus 85 ~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~---------i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 155 (447)
T 3dw8_B 85 DYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT---------IKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVP 155 (447)
T ss_dssp EGGGTEEECCCCCEEEECCCCSSSEEEEEECSSC---------EEEEEEEEEEEEEECCSCC--------CCCCCSCCCC
T ss_pred cccccccccCceEEEEEcCCCCcceEEEeCCCCe---------EEEEecccccCCcceecccCccccccCcccccceEec
Confidence 889999999998 79999999998 999998742100 00 00000
Q ss_pred c-----------eEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeE-------Eec
Q 037368 116 D-----------CIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL-------QVD 177 (823)
Q Consensus 116 ~-----------~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~-------~~~ 177 (823)
. +.+.+ ...+..+ |++++|+|++.. +|+| .||.|++|+..- .+..... +..
T Consensus 156 ~~~~~~~~~~~~~~~~~-~~~h~~~---v~~~~~~~~~~~---l~s~-~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~ 224 (447)
T 3dw8_B 156 VFRPMDLMVEASPRRIF-ANAHTYH---INSISINSDYET---YLSA-DDLRINLWHLEI---TDRSFNIVDIKPANMEE 224 (447)
T ss_dssp EEEEEEEEEEEEEEEEE-CSCCSSC---CCEEEECTTSSE---EEEE-CSSEEEEEETTE---EEEEEEEEECCCSSGGG
T ss_pred cccchheeeeccceEEe-ccCCCcc---eEEEEEcCCCCE---EEEe-CCCeEEEEECCC---CCceeeeeecccccccc
Confidence 0 00011 1112333 999999999999 9999 799999998631 1111111 224
Q ss_pred CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCC---cceEEccCCC------------ccceecccCCCeEEE-ee
Q 037368 178 NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPP---KRQFLDNIGC------------STNSVAMSDRLELII-GR 241 (823)
Q Consensus 178 ~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~---~~~~l~~~~~------------~~~~~~~s~~~~liv-~~ 241 (823)
+.++|++++|+|++...++..+.++.|++||+..... ....+..+.. .+.+++|+|+|++++ ++
T Consensus 225 ~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 225 LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 5788999999999721444444566799999876432 1466665554 789999999998654 55
Q ss_pred CCeEEEEecCC-CCccccccCCe--------------------EEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEE-
Q 037368 242 PEAVYFYEVDG-RGPCWAFEGEK--------------------KLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAH- 299 (823)
Q Consensus 242 ~~~I~i~~~~g-~~~~~~~~g~~--------------------~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~- 299 (823)
++.|++|++.. ......+.++. ..+.+.+.+|++++ .+++|+|||+.++....
T Consensus 305 ~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-----~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 305 YLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-----YNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp SSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-----STTEEEEEETTTCCEEEE
T ss_pred CCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec-----cCCEEEEEEcCCCcceee
Confidence 57999999974 22233444442 23445677887776 46899999998764322
Q ss_pred ecc--------------------------------cc-ceeEE-EeecCcEEEEEcCCeEEEEee
Q 037368 300 SLV--------------------------------VK-EVSHM-LCEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 300 ~~~--------------------------------i~-~v~~v-~~~~~~~~vvs~~~~v~~l~~ 330 (823)
... +. .+..+ +++.+.++++++.+.++....
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 380 EASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp ECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred eecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 111 01 13333 677888888887777776653
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.89 E-value=4.1e-21 Score=209.73 Aligned_cols=273 Identities=10% Similarity=0.084 Sum_probs=178.0
Q ss_pred CCeEEEee-CCCEEEEEecCCeEEEEcCC------------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccc
Q 037368 26 GNITCCSS-GRGKVVIGCDDGAVSLLDRG------------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQ 92 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs~dG~i~~~d~~------------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~ 92 (823)
..|+|+.+ +++.+++++.|+++++||.. .........|...|.+++|+|++ .|+++|.||+
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~----- 104 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA----- 104 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE-----
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE-----
Confidence 34777776 45666555558888888621 11111233466789999999985 6889999998
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF 172 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~ 172 (823)
|+|||+...+ ...........+..+ |++++|+||++. +|+|+.||+|++|+.. .+...
T Consensus 105 ----v~lWd~~~~~--------~~~~~~~~~~~H~~~---V~~v~~spdg~~---l~sgs~d~~i~iwd~~----~~~~~ 162 (344)
T 4gqb_B 105 ----VELWELDENE--------TLIVSKFCKYEHDDI---VSTVSVLSSGTQ---AVSGSKDICIKVWDLA----QQVVL 162 (344)
T ss_dssp ----EEEEEECTTS--------SCEEEEEEEECCSSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----TTEEE
T ss_pred ----EEEEeccCCC--------ceeEeeccccCCCCC---EEEEEECCCCCE---EEEEeCCCeEEEEECC----CCcEE
Confidence 9999998532 111111122222334 999999999999 9999999999999863 23333
Q ss_pred eEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEE--ccCCCccceecccCC-CeE-EEee-CCeEE
Q 037368 173 KLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFL--DNIGCSTNSVAMSDR-LEL-IIGR-PEAVY 246 (823)
Q Consensus 173 ~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l--~~~~~~~~~~~~s~~-~~l-iv~~-~~~I~ 246 (823)
..+..+.++|++++|++++. .+++++ .++.|++||+.... +...+ ..++..+.+++|+|+ +++ ++|+ ++.|+
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKD-SVFLSCSEDNRILLWDTRCPK-PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEECCCSSCEEEEEECSSCT-TEEEEEETTSCEEEEETTSSS-CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEcCcCCceEEEEecCCCC-Cceeeeccccccccccccccc-eeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 44556788999999999885 344444 46679999997543 33443 245566788999984 454 4454 46899
Q ss_pred EEecCCCCccccccCC---eEEEEe--eC-cEEEEEEecCCCCccEEEEEeCCCCEEE-EeccccceeEE-EeecCc-EE
Q 037368 247 FYEVDGRGPCWAFEGE---KKLLGW--FR-GYLLCVIADQRNSKNIFNVYDLKNRLIA-HSLVVKEVSHM-LCEWGN-II 317 (823)
Q Consensus 247 i~~~~g~~~~~~~~g~---~~~i~~--~~-~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~i~~v~~v-~~~~~~-~~ 317 (823)
+||++.......+.+| ...++| ++ .+|++++ .|++|+|||+.++.+. ...+-..|..+ |++.+. ++
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs-----~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS-----EDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE-----TTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe-----CCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEE
Confidence 9999754444566666 345555 34 4677777 4689999999887654 33344446665 677765 45
Q ss_pred EEEcCCeEEEEeecCh
Q 037368 318 LVMTDKSVLCIGEKDM 333 (823)
Q Consensus 318 vvs~~~~v~~l~~~~~ 333 (823)
+.++.+..++++..+.
T Consensus 316 as~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 316 TTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEETTSCEEEEECCC
T ss_pred EEEcCCCeEEEEECCC
Confidence 4444344455665544
No 25
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.89 E-value=2.5e-21 Score=209.06 Aligned_cols=227 Identities=15% Similarity=0.165 Sum_probs=169.3
Q ss_pred CeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.|+++++. +.++++|+.||+|++|| .+++.++.|.+|.+.|.+++++|++++|+|+|.|++ |++||+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~---------i~vwd~~ 137 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT---------IKVWTIK 137 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC---------EEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe---------EEEEECC
Confidence 47666654 35899999999999999 789999999999999999999999999999999998 9999996
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC------CCcceEEEEEeCCeEEEEEcccccccccceeEEec
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA------PPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~------~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
. .++.++..+ ..+ |.+++++|+. .. +++|+.||.|++|+.. .......+..
T Consensus 138 ~-----------~~~~~~~~h--~~~---v~~~~~~~~~~~~~~~~~---l~s~~~d~~i~~wd~~----~~~~~~~~~~ 194 (319)
T 3frx_A 138 G-----------QCLATLLGH--NDW---VSQVRVVPNEKADDDSVT---IISAGNDKMVKAWNLN----QFQIEADFIG 194 (319)
T ss_dssp S-----------CEEEEECCC--SSC---EEEEEECCC------CCE---EEEEETTSCEEEEETT----TTEEEEEECC
T ss_pred C-----------CeEEEEecc--CCc---EEEEEEccCCCCCCCccE---EEEEeCCCEEEEEECC----cchhheeecC
Confidence 3 255555422 333 9999999854 46 9999999999999863 1112223445
Q ss_pred CCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeCCeEEEEecCCCCc
Q 037368 178 NQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRPEAVYFYEVDGRGP 255 (823)
Q Consensus 178 ~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~~~I~i~~~~g~~~ 255 (823)
+..+|++++|+|+|+ .+++++ ++.|++||+.... ....+.. ...+.+++|+|++.+++ +.++++++|+.+....
T Consensus 195 h~~~v~~~~~sp~g~--~l~s~~~dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 195 HNSNINTLTASPDGT--LIASAGKDGEIMLWNLAAKK-AMYTLSA-QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYL 270 (319)
T ss_dssp CCSCEEEEEECTTSS--EEEEEETTCEEEEEETTTTE-EEEEEEC-CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEE
T ss_pred CCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCc-EEEEecC-CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCee
Confidence 688999999999994 455554 5679999997643 4445543 45688999999998654 5677999998864311
Q ss_pred cc-----------cccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 256 CW-----------AFEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 256 ~~-----------~~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
.. ..++....++| .+.+|++++ .|++|+|||+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~-----~Dg~i~vWd~~t 317 (319)
T 3frx_A 271 VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY-----TDNVIRVWQVMT 317 (319)
T ss_dssp EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE-----TTSCEEEEEEEE
T ss_pred eeccCccccccccCcCcceeEEEECCCCCEEEEee-----cCceEEEEEEee
Confidence 11 11222334444 678998887 458999999754
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.89 E-value=4.8e-21 Score=213.12 Aligned_cols=227 Identities=19% Similarity=0.193 Sum_probs=169.3
Q ss_pred eEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 28 ITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 28 is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
|+|++++ +.+|++|+.||+|++|| .+++.+..+++|...|.+++|+|++++|+|+|.|++ |++||+..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~---------v~iwd~~~ 196 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT---------VRIWDLRT 196 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE---------EEEEETTT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc---------EEEEECCC
Confidence 7777764 35899999999999999 778888899999999999999999999999999998 99999974
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccccccceeEE-------e
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-------V 176 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-------~ 176 (823)
. .+..++... .+ +++++++| ++.. +|+|+.||+|++|+.. .+.....+ .
T Consensus 197 ~----------~~~~~~~~~---~~---v~~~~~~~~~~~~---l~~~s~d~~v~iwd~~----~~~~~~~~~~~~~~~~ 253 (393)
T 1erj_A 197 G----------QCSLTLSIE---DG---VTTVAVSPGDGKY---IAAGSLDRAVRVWDSE----TGFLVERLDSENESGT 253 (393)
T ss_dssp T----------EEEEEEECS---SC---EEEEEECSTTCCE---EEEEETTSCEEEEETT----TCCEEEEEC------C
T ss_pred C----------eeEEEEEcC---CC---cEEEEEECCCCCE---EEEEcCCCcEEEEECC----CCcEEEeecccccCCC
Confidence 2 355454421 23 99999999 8899 9999999999999853 11111111 2
Q ss_pred cCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCC-----------CcceEEccCCCccceecccCCCeEE-Eee-C
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQP-----------PKRQFLDNIGCSTNSVAMSDRLELI-IGR-P 242 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~-----------~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~ 242 (823)
.+.++|++++|+++|+ .+++++ ++.|++||+.... .....+.+|...+.+++|+|++.++ +|+ +
T Consensus 254 ~h~~~v~~v~~~~~g~--~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 254 GHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp CCSSCEEEEEECTTSS--EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred CCCCCEEEEEECCCCC--EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence 3467899999999984 455554 5679999986421 1223455677788999999988755 444 4
Q ss_pred CeEEEEecCCCCccccccCC---eEEEEee--------CcEEEEEEecCCCCccEEEEEeCC
Q 037368 243 EAVYFYEVDGRGPCWAFEGE---KKLLGWF--------RGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 243 ~~I~i~~~~g~~~~~~~~g~---~~~i~~~--------~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+.|++|+.........+.|| ...+++. ++++++++ .|++|+||++.
T Consensus 332 ~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs-----~Dg~i~iW~~~ 388 (393)
T 1erj_A 332 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS-----GDCKARIWKYK 388 (393)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE-----TTSEEEEEEEE
T ss_pred CeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC-----CCCcEEECccc
Confidence 58999998744444456666 3445543 46777777 46899999874
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.89 E-value=5.3e-21 Score=204.14 Aligned_cols=236 Identities=11% Similarity=0.088 Sum_probs=168.2
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEcC---CCeeeEeEeecccceeEEEEec--CCCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLDR---GLKFNFGFQAHSSSVLFLQQLK--QRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d~---~~~~~~~~~~H~~~V~~i~~~~--~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|.|++++ +.+|++|+.||+|++|+. +++.+.++.+|+++|.+++|++ ++++|+|+|.|++ |+
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~---------v~ 80 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK---------VM 80 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE---------EE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE---------EE
Confidence 358777764 368999999999999993 3467789999999999999986 3899999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
|||+... ...++.++..+ ..+ |++++|+|+ +.. +|+|+.||+|++|+..- ........+.
T Consensus 81 iWd~~~~--------~~~~~~~~~~h--~~~---v~~v~~~p~~~g~~---l~s~s~d~~v~~wd~~~--~~~~~~~~~~ 142 (297)
T 2pm7_B 81 IWKEENG--------RWSQIAVHAVH--SAS---VNSVQWAPHEYGPM---LLVASSDGKVSVVEFKE--NGTTSPIIID 142 (297)
T ss_dssp EEEBSSS--------CBCCCEEECCC--SSC---EEEEEECCGGGCSE---EEEEETTSEEEEEEBCS--SSCBCCEEEE
T ss_pred EEEcCCC--------ceEEEEEeecC--CCc---eeEEEeCcCCCCcE---EEEEECCCcEEEEEecC--CCceeeeeee
Confidence 9999742 11133343322 334 999999998 788 99999999999998631 1111223344
Q ss_pred cCCCCcceEEEeecCC-----------eEEEEEEc-CCeEEEEEecCCCC---cceEEccCCCccceecccCCC---e-E
Q 037368 177 DNQCSVMGLGFRVDGQ-----------ALQLFAVT-PNSVILFSLQNQPP---KRQFLDNIGCSTNSVAMSDRL---E-L 237 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~-----------~~~l~~~t-~~~V~~~d~~~~~~---~~~~l~~~~~~~~~~~~s~~~---~-l 237 (823)
.+..+|++++|+|++. ...|++++ ++.|++||+..... ....+.+|...+.+++|+|++ . +
T Consensus 143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l 222 (297)
T 2pm7_B 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM 222 (297)
T ss_dssp CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEE
Confidence 5678999999998631 02455554 56799999875331 345677888899999999974 4 5
Q ss_pred EEee-CCeEEEEecCCCC-c----cc---cccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 238 IIGR-PEAVYFYEVDGRG-P----CW---AFEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 238 iv~~-~~~I~i~~~~g~~-~----~~---~~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
++++ |++|++|+++... + .. .+++....++| .+.+|++++ .|++|+||+..
T Consensus 223 as~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~-----~D~~v~lw~~~ 284 (297)
T 2pm7_B 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-----GDNKVTLWKEN 284 (297)
T ss_dssp EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE-----TTSCEEEEEEC
T ss_pred EEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc-----CCCcEEEEEEC
Confidence 5554 4689999987421 1 11 12223344555 567888777 45899999875
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.8e-21 Score=207.79 Aligned_cols=238 Identities=13% Similarity=0.130 Sum_probs=164.3
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEcC--------CCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLDR--------GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d~--------~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
.|.|+++++ ..|++|+.||+|++|+. .++.+..+++|.+.|.+++|+|+|++|+|+|.|++
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~--------- 130 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS--------- 130 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSC---------
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCE---------
Confidence 588887643 58899999999999984 23567789999999999999999999999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
|+|||+.... ....++.++..+ ..+ |++++|+|++.. +|+|+.||+|++|+..- ........+.
T Consensus 131 v~iwd~~~~~------~~~~~~~~~~~h--~~~---v~~v~~~p~~~~---l~s~s~D~~i~iW~~~~--~~~~~~~~~~ 194 (330)
T 2hes_X 131 VWIWETDESG------EEYECISVLQEH--SQD---VKHVIWHPSEAL---LASSSYDDTVRIWKDYD--DDWECVAVLN 194 (330)
T ss_dssp EEEEECCTTC------CCCEEEEEECCC--SSC---EEEEEECSSSSE---EEEEETTSCEEEEEEET--TEEEEEEEEC
T ss_pred EEEEeccCCC------CCeEEEEEeccC--CCc---eEEEEECCCCCE---EEEEcCCCeEEEEECCC--CCeeEEEEcc
Confidence 9999995321 122355555433 334 999999999999 99999999999997521 0001223344
Q ss_pred cCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCC-------CcceEEcc-CCCccceecccCCCeEEEee-CCeEE
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQP-------PKRQFLDN-IGCSTNSVAMSDRLELIIGR-PEAVY 246 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~-------~~~~~l~~-~~~~~~~~~~s~~~~liv~~-~~~I~ 246 (823)
.+.++|++++|+|++....+++++ ++.|++|++.+.. .....+.. |...+.+++|++++.+++++ ++.|+
T Consensus 195 ~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~ 274 (330)
T 2hes_X 195 GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLA 274 (330)
T ss_dssp CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEE
T ss_pred CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEE
Confidence 568899999999983213455554 5679999986431 11223333 77789999999988888765 46899
Q ss_pred EEecCCCC-ccc--cccCC----eEEEEee----CcEEEEEEecCCCCccEEEEEeCCC
Q 037368 247 FYEVDGRG-PCW--AFEGE----KKLLGWF----RGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 247 i~~~~g~~-~~~--~~~g~----~~~i~~~----~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+|+..+.. ... ...+| ...++|. +.+|++++ .|++|+|||+..
T Consensus 275 iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s-----~Dg~v~~W~~~~ 328 (330)
T 2hes_X 275 VYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG-----DDGIVNFWSLEK 328 (330)
T ss_dssp EEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE-----TTSEEEEEEC--
T ss_pred EEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec-----CCCcEEEEEecc
Confidence 99986321 111 12232 3455553 45777777 468999999864
No 29
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=1.3e-20 Score=213.83 Aligned_cols=267 Identities=15% Similarity=0.190 Sum_probs=192.7
Q ss_pred eEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCC
Q 037368 28 ITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKME 106 (823)
Q Consensus 28 is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~ 106 (823)
++|+.++++++++|+.||+|++|| .+++.+.++.+|.+.|++++++|++ .|+|+|.||+ |++||+...
T Consensus 125 ~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~---------i~vwd~~~~- 193 (464)
T 3v7d_B 125 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT---------VRVWDIKKG- 193 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSC---------EEEEETTTT-
T ss_pred EEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC---------EEEEECCCC-
Confidence 688888889999999999999999 8899999999999999999999877 9999999998 999999842
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCceEEEEEe--cCCCCcceEEEEEeCCeEEEEEcccccccc---c-----------
Q 037368 107 PEGTSSTSPDCIGILRVFTSQFPEAKITSFLVL--EEAPPILLIAIGLDNGCIYCIKGDIARERI---T----------- 170 (823)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~--~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~---~----------- 170 (823)
.+++++..+ ..+ |++++|+ +++.. +++|+.||+|++|+..-..... .
T Consensus 194 ---------~~~~~~~~h--~~~---v~~l~~~~~~~~~~---l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 194 ---------CCTHVFEGH--NST---VRCLDIVEYKNIKY---IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp ---------EEEEEECCC--SSC---EEEEEEEESSSCEE---EEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred ---------cEEEEECCC--CCc---cEEEEEecCCCCCE---EEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 356565432 334 9999998 57778 9999999999999853100000 0
Q ss_pred -----ceeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEee-CC
Q 037368 171 -----RFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGR-PE 243 (823)
Q Consensus 171 -----k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~-~~ 243 (823)
.......+..+|+++ +++++ .++..+.++.|++||+... .+...+.+|...+.+++|+|++.. ++|+ ++
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 011223446677776 45553 3444445667999999753 355667778888999999998865 4454 46
Q ss_pred eEEEEecCCCCccccccCC---eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccc-ee-EEEeecCcEEE
Q 037368 244 AVYFYEVDGRGPCWAFEGE---KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKE-VS-HMLCEWGNIIL 318 (823)
Q Consensus 244 ~I~i~~~~g~~~~~~~~g~---~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~-v~-~v~~~~~~~~v 318 (823)
.|++|+++.......+.+| ...+.+.+.++++++. +++|++||+.+....+...... +. ..++..+.+++
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAA-----DGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 407 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEET-----TSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEE
T ss_pred cEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeC-----CCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEE
Confidence 8999998743333455555 4578888889998884 5899999998755444332222 22 23677778887
Q ss_pred EEcCCeEEEEeecC
Q 037368 319 VMTDKSVLCIGEKD 332 (823)
Q Consensus 319 vs~~~~v~~l~~~~ 332 (823)
.++++ .++++...
T Consensus 408 ~~~dg-~i~iwd~~ 420 (464)
T 3v7d_B 408 SGSEN-QFNIYNLR 420 (464)
T ss_dssp EEETT-EEEEEETT
T ss_pred EecCC-eEEEEECC
Confidence 77766 44555433
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.6e-20 Score=202.07 Aligned_cols=279 Identities=10% Similarity=0.074 Sum_probs=197.6
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .+|++|+.||.|++|| .+++.+.++.+|.+.|.+++|+|++++|+|++.|++ |++||+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~---------i~iwd~ 103 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYS---------IKLWDV 103 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE---------EEEEET
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCe---------EEEEEC
Confidence 4488888753 5899999999999999 788889999999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC-----CeEEEEEccccccc-------cc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN-----GCIYCIKGDIARER-------IT 170 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d-----G~V~l~~~~~~~~~-------~~ 170 (823)
... .++..+. + ..+ +.+++|+|++.. +++|+.+ |.|.+|+..-.... ..
T Consensus 104 ~~~----------~~~~~~~-~--~~~---v~~~~~~~~~~~---l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 104 SNG----------QCVATWK-S--PVP---VKRVEFSPCGNY---FLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp TTC----------CEEEEEE-C--SSC---EEEEEECTTSSE---EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred CCC----------cEEEEee-c--CCC---eEEEEEccCCCE---EEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 842 3555554 2 334 999999999999 9999998 99999985311000 00
Q ss_pred ceeEEecCCC--CcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeE
Q 037368 171 RFKLQVDNQC--SVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAV 245 (823)
Q Consensus 171 k~~~~~~~~~--~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I 245 (823)
....+..+.+ .|++++|+++++ .++++ .++.|.+||+.........+..|...+.+++|+|++.++ +++ ++.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 242 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGK--YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS 242 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGC--EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeeeccCCcCccceeEEEEcCCCC--EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceE
Confidence 1112222333 899999999984 45555 456799999986444566677788889999999988754 444 4689
Q ss_pred EEEecCCCCcccccc--CCeEEE--EeeCcEEEEEEecCC---------CCccEEEEEeCCCCEEE--EeccccceeEE-
Q 037368 246 YFYEVDGRGPCWAFE--GEKKLL--GWFRGYLLCVIADQR---------NSKNIFNVYDLKNRLIA--HSLVVKEVSHM- 309 (823)
Q Consensus 246 ~i~~~~g~~~~~~~~--g~~~~i--~~~~~ylv~~s~d~~---------~~~~~I~I~D~~~~~i~--~~~~i~~v~~v- 309 (823)
++|++........+. .....+ .+.+.++++++.++. .....+++||....... +..+...+..+
T Consensus 243 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA 322 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEE
Confidence 999987433222332 223333 445678888775421 11238999999765433 23333345554
Q ss_pred EeecCcEEEEEcCCeEEEEeecChH
Q 037368 310 LCEWGNIILVMTDKSVLCIGEKDME 334 (823)
Q Consensus 310 ~~~~~~~~vvs~~~~v~~l~~~~~~ 334 (823)
+++++.+++.++.+..++++..+..
T Consensus 323 ~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 323 ISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEEECHH
T ss_pred ECCCCCEEEEEcCCCeEEEEECccc
Confidence 6777787777665666777766554
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.88 E-value=1.4e-20 Score=219.64 Aligned_cols=263 Identities=15% Similarity=0.174 Sum_probs=197.3
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|+++++.+ ..+++|+.||+|++|+.+++..+.+.+|...|.+++++|+++.|+|++.|++ |++||+.
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~---------i~~w~~~ 333 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT---------VKLWNRN 333 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC---------EEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCe---------EEEEeCC
Confidence 4577777643 5889999999999999888888899999999999999999999999999998 9999986
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcc
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVM 183 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It 183 (823)
.. .+..+..+ ..+ |++++|+|++.. +|+|+.||.|++|+.. +.....+..+..+|+
T Consensus 334 ~~-----------~~~~~~~~--~~~---v~~~~~s~~g~~---l~~~~~dg~v~~~~~~-----~~~~~~~~~~~~~v~ 389 (577)
T 2ymu_A 334 GQ-----------HLQTLTGH--SSS---VWGVAFSPDGQT---IASASDDKTVKLWNRN-----GQLLQTLTGHSSSVR 389 (577)
T ss_dssp SC-----------EEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSEEEEEETT-----CCEEEEEECCSSCEE
T ss_pred CC-----------eeEEEeCC--CCC---EEEEEECCCCCE---EEEEeCCCEEEEEcCC-----CCEEEEecCCCCCeE
Confidence 31 34444322 333 999999999999 9999999999999842 222334455678999
Q ss_pred eEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcccccc
Q 037368 184 GLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFE 260 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~ 260 (823)
+++|+|+|+ .++++ .++.|++|+..+ .....+..|...+.+++|+|+++++ +++ ++.|++|+..++. ...+.
T Consensus 390 ~~~~s~dg~--~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~-~~~~~ 464 (577)
T 2ymu_A 390 GVAFSPDGQ--TIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL-LQTLT 464 (577)
T ss_dssp EEEECTTSS--CEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE-EEEEE
T ss_pred EEEECCCCC--EEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE-EEEEc
Confidence 999999995 45555 456799999654 3556677888889999999988755 444 4589999986542 23344
Q ss_pred CC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE-EeccccceeEE-EeecCcEEEEEcCCeEEEEeec
Q 037368 261 GE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA-HSLVVKEVSHM-LCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 261 g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
+| ...+++ .+.++++++ .+++|+|||..++.+. +..+-..+..+ |++++.+++.++.+..++++..
T Consensus 465 ~~~~~v~~~~~spd~~~las~~-----~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASAS-----DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEE-----TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCCCCEEEEEEcCCCCEEEEEe-----CCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 44 344444 567888877 4589999998877653 33444445555 7778887777666667777753
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=9.3e-21 Score=207.57 Aligned_cols=235 Identities=13% Similarity=0.066 Sum_probs=169.5
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCe--eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEE
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
...|+|+++++ .++++|+.||.|++|| .+++ .+..+.+|...|++++|+|++++|++++.|++ |++
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~---------i~v 78 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRN---------AYV 78 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSC---------EEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCe---------EEE
Confidence 34687777653 5889999999999999 5555 78899999999999999999999999999998 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccc-ceeEE-ec
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERIT-RFKLQ-VD 177 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~-k~~~~-~~ 177 (823)
||+... .+...+....+..+ |++++|+|+++. +|+|+.||.|++|+.... ... ....+ ..
T Consensus 79 wd~~~~----------~~~~~~~~~~~~~~---v~~~~~~~~~~~---l~~~~~d~~v~i~d~~~~--~~~~~~~~~~~~ 140 (372)
T 1k8k_C 79 WTLKGR----------TWKPTLVILRINRA---ARCVRWAPNEKK---FAVGSGSRVISICYFEQE--NDWWVCKHIKKP 140 (372)
T ss_dssp EEEETT----------EEEEEEECCCCSSC---EEEEEECTTSSE---EEEEETTSSEEEEEEETT--TTEEEEEEECTT
T ss_pred EECCCC----------eeeeeEEeecCCCc---eeEEEECCCCCE---EEEEeCCCEEEEEEecCC--Ccceeeeeeecc
Confidence 999742 23333332222334 999999999999 999999999999986421 100 11222 23
Q ss_pred CCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecC-----------------CCCcceEEccCCCccceecccCCCeEE-
Q 037368 178 NQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQN-----------------QPPKRQFLDNIGCSTNSVAMSDRLELI- 238 (823)
Q Consensus 178 ~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~-----------------~~~~~~~l~~~~~~~~~~~~s~~~~li- 238 (823)
+..+|++++|+++++ .++++ .++.|++||+.. .+.....+..|...+.+++|+|++.++
T Consensus 141 ~~~~i~~~~~~~~~~--~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 218 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSV--LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA 218 (372)
T ss_dssp CCSCEEEEEECTTSS--EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred cCCCeeEEEEcCCCC--EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE
Confidence 478999999999984 45555 456799999642 123444556677889999999988654
Q ss_pred Eee-CCeEEEEecCCCCccccccCC---eEEEEee--CcEEEEEEecCCCCccEEEEEeCCC
Q 037368 239 IGR-PEAVYFYEVDGRGPCWAFEGE---KKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 239 v~~-~~~I~i~~~~g~~~~~~~~g~---~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+++ ++.|++|+++.......+.++ ...+.|. +.+++++ .++.|++||+.+
T Consensus 219 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------~d~~i~i~~~~~ 274 (372)
T 1k8k_C 219 WVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG------HDCFPVLFTYDS 274 (372)
T ss_dssp EEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE------TTSSCEEEEEET
T ss_pred EEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE------eCCeEEEEEccC
Confidence 444 468999998744333344444 3455553 4555544 358999999976
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.88 E-value=3.3e-21 Score=211.66 Aligned_cols=231 Identities=13% Similarity=0.068 Sum_probs=166.3
Q ss_pred CCCeEEEee-CCCEEEEEecCCeEEEEc-CCCeee----EeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 25 SGNITCCSS-GRGKVVIGCDDGAVSLLD-RGLKFN----FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 25 ~~~is~~~~-~~~~l~~gs~dG~i~~~d-~~~~~~----~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...|+|+++ +++.+++|+.||+|++|| .+++.. ....+|.+.|++++|+|+|++|+|+|.|++ |+
T Consensus 94 ~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~---------v~ 164 (357)
T 4g56_B 94 EAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS---------VK 164 (357)
T ss_dssp SSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC---------EE
T ss_pred CCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe---------EE
Confidence 345877775 568899999999999999 555432 234479999999999999999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccccceeE--E
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERITRFKL--Q 175 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~--~ 175 (823)
|||+.+ +.++..+..+ ..+ |++++|+|++. . +++|+.||+|++|+.. .+..... .
T Consensus 165 iwd~~~----------~~~~~~~~~h--~~~---v~~v~~s~~~~~~---~~s~~~dg~v~~wd~~----~~~~~~~~~~ 222 (357)
T 4g56_B 165 VWDLSQ----------KAVLKSYNAH--SSE---VNCVAACPGKDTI---FLSCGEDGRILLWDTR----KPKPATRIDF 222 (357)
T ss_dssp EEETTT----------TEEEEEECCC--SSC---EEEEEECTTCSSC---EEEEETTSCEEECCTT----SSSCBCBCCC
T ss_pred EEECCC----------CcEEEEEcCC--CCC---EEEEEEccCCCce---eeeeccCCceEEEECC----CCceeeeeee
Confidence 999984 2356565533 334 99999999875 6 8999999999999853 1111111 1
Q ss_pred ecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCC-eE-EEee-CCeEEEEecC
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRL-EL-IIGR-PEAVYFYEVD 251 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~-~l-iv~~-~~~I~i~~~~ 251 (823)
..+..+|++++|+|++. .++++++ ++.|++||+... .....+..|...+.+++|+|++ ++ ++++ |+.|++|+++
T Consensus 223 ~~~~~~v~~v~~sp~~~-~~la~g~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKD-DTFACGDETGNVSLVNIKNP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp TTCCSCEEEEEECTTST-TEEEEEESSSCEEEEESSCG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ccccccccchhhhhccc-ceEEEeecccceeEEECCCC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 23467899999999864 3555554 557999999753 3567787888889999999977 44 4454 4689999987
Q ss_pred CCCccccccCC---eEEEEee---CcEEEEEEecCCCCccEEEEEeCCC
Q 037368 252 GRGPCWAFEGE---KKLLGWF---RGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 252 g~~~~~~~~g~---~~~i~~~---~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
. +.++...+| ...++|. +.+|++++ .|++|++||+..
T Consensus 301 ~-~~~~~~~~H~~~V~~vafsP~d~~~l~s~s-----~Dg~v~iW~~~~ 343 (357)
T 4g56_B 301 F-SEVFRDLSHRDFVTGVAWSPLDHSKFTTVG-----WDHKVLHHHLPS 343 (357)
T ss_dssp S-CEEEEECCCSSCEEEEEECSSSTTEEEEEE-----TTSCEEEEECC-
T ss_pred C-CcEeEECCCCCCEEEEEEeCCCCCEEEEEc-----CCCeEEEEECCC
Confidence 4 344433344 4567764 56888887 468999999854
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.88 E-value=1.1e-20 Score=222.78 Aligned_cols=272 Identities=11% Similarity=0.155 Sum_probs=189.0
Q ss_pred CeEEEeeCC-C--EEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 27 NITCCSSGR-G--KVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 27 ~is~~~~~~-~--~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
.|+++++++ + .|++|+.||+|++|| ..++...++.+|...|.+++|+|+|++|+|+|.|++ |+|||+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~---------i~lwd~ 219 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT---------IVLYNG 219 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC---------EEEEET
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc---------EEEEEC
Confidence 477777754 2 599999999999999 778888899999999999999999999999999998 999998
Q ss_pred CCCCCCCCCCCCCceEEEEEec-----cCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccc---cccc------
Q 037368 103 DKMEPEGTSSTSPDCIGILRVF-----TSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDI---ARER------ 168 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~---~~~~------ 168 (823)
... .+++++... .+. ..|++++|+||++. +|+|+.||+|++|+..- .+..
T Consensus 220 ~~g----------~~~~~~~~~~~~~~~h~---~~V~~v~~spdg~~---l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 220 VDG----------TKTGVFEDDSLKNVAHS---GSVFGLTWSPDGTK---IASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp TTC----------CEEEECBCTTSSSCSSS---SCEEEEEECTTSSE---EEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred CCC----------cEeeeeccccccccccC---CCEEEEEECCCCCE---EEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 742 244443210 112 33999999999999 99999999999998531 0000
Q ss_pred ------------------------------ccceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcce
Q 037368 169 ------------------------------ITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQ 217 (823)
Q Consensus 169 ------------------------------~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~ 217 (823)
+.....+..+..+|++++|+|+|+ .|++++ ++.|++||+.+.. ...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~--~l~s~s~D~~v~~Wd~~~~~-~~~ 360 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK--TLFSADAEGHINSWDISTGI-SNR 360 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCC-EEE
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC--EEEEEeCCCcEEEEECCCCc-eee
Confidence 000112234577899999999995 455554 5679999997542 333
Q ss_pred EE-ccCCCccceecccCCCeEEEe-eCCeEEEEecCCCCcc------ccccCC---------------------------
Q 037368 218 FL-DNIGCSTNSVAMSDRLELIIG-RPEAVYFYEVDGRGPC------WAFEGE--------------------------- 262 (823)
Q Consensus 218 ~l-~~~~~~~~~~~~s~~~~liv~-~~~~I~i~~~~g~~~~------~~~~g~--------------------------- 262 (823)
.+ ..|...+.+++|++++.++++ +++.+++|+..+.... ..+.++
T Consensus 361 ~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~ 440 (611)
T 1nr0_A 361 VFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 440 (611)
T ss_dssp CSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT
T ss_pred ecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCC
Confidence 33 457778889999998888765 5679999987542110 001111
Q ss_pred ----------eEEE--EeeCcEEEEEEecCCCCccEEEEEeCCCCEEE---EeccccceeEE-EeecCcEEEEEcCCeEE
Q 037368 263 ----------KKLL--GWFRGYLLCVIADQRNSKNIFNVYDLKNRLIA---HSLVVKEVSHM-LCEWGNIILVMTDKSVL 326 (823)
Q Consensus 263 ----------~~~i--~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~---~~~~i~~v~~v-~~~~~~~~vvs~~~~v~ 326 (823)
...+ ++++.++++++ .+++|+|||+.++... ...+-..+..+ |++++.+++.++.+..+
T Consensus 441 ~~~~~~~~~~v~~va~spdg~~lasgs-----~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v 515 (611)
T 1nr0_A 441 KLTEVPISYNSSCVALSNDKQFVAVGG-----QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKV 515 (611)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEE-----TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeeeecCCCceEEEEeCCCCEEEEeC-----CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCE
Confidence 1122 23456776666 4689999999875431 11222235554 78888888777666666
Q ss_pred EEeec
Q 037368 327 CIGEK 331 (823)
Q Consensus 327 ~l~~~ 331 (823)
+++..
T Consensus 516 ~~w~~ 520 (611)
T 1nr0_A 516 IPYSV 520 (611)
T ss_dssp EEEEG
T ss_pred EEEEc
Confidence 77654
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.88 E-value=9.2e-21 Score=211.80 Aligned_cols=223 Identities=13% Similarity=0.119 Sum_probs=161.7
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
.+..|++|+.||.|++|| .+++....+++|.+.|++++|+|++++|+|+|.|++ |++||+...
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~---------i~iwd~~~~------- 171 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQ---------LKIWSVKDG------- 171 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSE---------EEEEETTTC-------
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCe---------EEEEeCCCC-------
Confidence 346899999999999999 677777778899999999999999999999999998 999999843
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec---------------
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD--------------- 177 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~--------------- 177 (823)
.+++++..+ ..+ |++++|+|+++. +++|+.||+|++|+.. .+.....+..
T Consensus 172 ---~~~~~~~~h--~~~---v~~~~~~~~~~~---l~s~~~d~~v~iwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~ 236 (420)
T 3vl1_A 172 ---SNPRTLIGH--RAT---VTDIAIIDRGRN---VLSASLDGTIRLWECG----TGTTIHTFNRKENPHDGVNSIALFV 236 (420)
T ss_dssp ---CCCEEEECC--SSC---EEEEEEETTTTE---EEEEETTSCEEEEETT----TTEEEEEECBTTBTTCCEEEEEEEE
T ss_pred ---cCceEEcCC--CCc---EEEEEEcCCCCE---EEEEcCCCcEEEeECC----CCceeEEeecCCCCCCCccEEEEec
Confidence 245555533 344 999999999999 9999999999999853 1111111111
Q ss_pred ---------CCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCe--EEEeeC-Ce
Q 037368 178 ---------NQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE--LIIGRP-EA 244 (823)
Q Consensus 178 ---------~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~--liv~~~-~~ 244 (823)
+..+|++++|+|+| ..+++++ ++.|++||+............|...+.+++|+|++. +++++. +.
T Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 237 GTDRQLHEISTSKKNNLEFGTYG--KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp CCCSSCGGGCCCCCCTTCSSCTT--EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCcceeeecccCcccceEEcCCC--CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 13566677778888 4555555 556999999765433333345777899999999886 455554 68
Q ss_pred EEEEecCCCCc-cccccC----CeEEEEe-eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 245 VYFYEVDGRGP-CWAFEG----EKKLLGW-FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 245 I~i~~~~g~~~-~~~~~g----~~~~i~~-~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
|++|+++.... ...+.+ ....+.+ .+.++++++ .+++|++||+..
T Consensus 315 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-----~d~~v~iw~~~~ 365 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSG-----FDTSIKLDIISD 365 (420)
T ss_dssp EEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEET-----TTEEEEEEEECC
T ss_pred EEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEec-----CCccEEEEeccC
Confidence 99999974322 223332 2334444 345666665 468999999865
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=3.7e-20 Score=206.37 Aligned_cols=275 Identities=13% Similarity=0.108 Sum_probs=194.7
Q ss_pred eEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEee-cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQA-HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~-H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
++++..+++.+++|+.||.|++|+ .+++....+.. |...|++++|+|++++|++++.||+ |++||+...
T Consensus 96 ~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~---------i~iwd~~~~ 166 (401)
T 4aez_A 96 LNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGL---------VDIYDVESQ 166 (401)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSC---------EEEEETTTC
T ss_pred EEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCe---------EEEEECcCC
Confidence 456666778899999999999999 67777777776 8899999999999999999999998 999999742
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceE
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGL 185 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l 185 (823)
.+++++..+ ..+ |++++|++ .. +++|+.||.|++|+... .......+..+.++|+++
T Consensus 167 ----------~~~~~~~~~--~~~---v~~~~~~~--~~---l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 167 ----------TKLRTMAGH--QAR---VGCLSWNR--HV---LSSGSRSGAIHHHDVRI---ANHQIGTLQGHSSEVCGL 223 (401)
T ss_dssp ----------CEEEEECCC--SSC---EEEEEEET--TE---EEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEE
T ss_pred ----------eEEEEecCC--CCc---eEEEEECC--CE---EEEEcCCCCEEEEeccc---CcceeeEEcCCCCCeeEE
Confidence 255555432 334 99999965 57 99999999999998631 122233445678899999
Q ss_pred EEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEE-ee---CCeEEEEecCCCCccccc
Q 037368 186 GFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LII-GR---PEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 186 ~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv-~~---~~~I~i~~~~g~~~~~~~ 259 (823)
+|+++++ .+++++ ++.|++||+... .+...+..|...+.+++|+|++. +++ ++ ++.|++|++........+
T Consensus 224 ~~~~~~~--~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~ 300 (401)
T 4aez_A 224 AWRSDGL--QLASGGNDNVVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV 300 (401)
T ss_dssp EECTTSS--EEEEEETTSCEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE
T ss_pred EEcCCCC--EEEEEeCCCeEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 9999984 455554 567999999753 35566777888899999999664 444 43 579999998743332233
Q ss_pred c--CCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEE----eccccceeEE-EeecCcEEEEEcCCeEEEEee
Q 037368 260 E--GEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAH----SLVVKEVSHM-LCEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 260 ~--g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~----~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~ 330 (823)
+ +....+.| .+.++++++.. .+++|+|||+.+..... ..+-..+..+ +++++..++.++.+..++++.
T Consensus 301 ~~~~~v~~~~~s~~~~~l~~~~g~---~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 301 DAGSQVTSLIWSPHSKEIMSTHGF---PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECT---TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred eCCCcEEEEEECCCCCeEEEEeec---CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 3 23455555 56788876532 46899999998754322 2232335444 677787777777666777877
Q ss_pred cChHHHHHHH
Q 037368 331 KDMESKLDML 340 (823)
Q Consensus 331 ~~~~~~i~~L 340 (823)
....+.+...
T Consensus 378 ~~~~~~~~~~ 387 (401)
T 4aez_A 378 VYDGDHVKRP 387 (401)
T ss_dssp CCC-------
T ss_pred CCCCcccccc
Confidence 6665554433
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.88 E-value=4.3e-20 Score=205.45 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=180.7
Q ss_pred CCeEEEeeC-C-CEEEEEecCCeEEEEc-CCCeeeEeEeeccc------------------ceeEEEEecCCCEEEEEec
Q 037368 26 GNITCCSSG-R-GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSS------------------SVLFLQQLKQRNFLVTVGE 84 (823)
Q Consensus 26 ~~is~~~~~-~-~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~------------------~V~~i~~~~~~~~l~s~s~ 84 (823)
..|+|++++ + .+|++|+ ++++++|+ .+++.+..+..|.. .|.+++|+|+|++|+|++.
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 347777764 3 4677776 78999999 77888777776642 3999999999999999999
Q ss_pred CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccc
Q 037368 85 DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDI 164 (823)
Q Consensus 85 D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~ 164 (823)
|++ |+|||+... .++.++..+ ..+ |++++|+|++.. +++|+.||+|++|+..
T Consensus 144 d~~---------i~iwd~~~~----------~~~~~~~~h--~~~---v~~~~~~p~~~~---l~s~s~d~~v~iwd~~- 195 (393)
T 1erj_A 144 DRL---------IRIWDIENR----------KIVMILQGH--EQD---IYSLDYFPSGDK---LVSGSGDRTVRIWDLR- 195 (393)
T ss_dssp TSC---------EEEEETTTT----------EEEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSEEEEEETT-
T ss_pred CCe---------EEEEECCCC----------cEEEEEccC--CCC---EEEEEEcCCCCE---EEEecCCCcEEEEECC-
Confidence 998 999999742 355555433 334 999999999999 9999999999999863
Q ss_pred ccccccceeEEecCCCCcceEEEee-cCCeEEEEEE-cCCeEEEEEecCCCCcceEE-------ccCCCccceecccCCC
Q 037368 165 ARERITRFKLQVDNQCSVMGLGFRV-DGQALQLFAV-TPNSVILFSLQNQPPKRQFL-------DNIGCSTNSVAMSDRL 235 (823)
Q Consensus 165 ~~~~~~k~~~~~~~~~~It~l~fs~-dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l-------~~~~~~~~~~~~s~~~ 235 (823)
..+..........|++++|+| +|+ .++++ .++.|++||+.... ....+ .+|...+.+++|+|+|
T Consensus 196 ----~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~s~d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 196 ----TGQCSLTLSIEDGVTTVAVSPGDGK--YIAAGSLDRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp ----TTEEEEEEECSSCEEEEEECSTTCC--EEEEEETTSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTS
T ss_pred ----CCeeEEEEEcCCCcEEEEEECCCCC--EEEEEcCCCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCC
Confidence 122222334567899999998 663 45555 45679999987543 23333 3567788999999999
Q ss_pred eEE-Eee-CCeEEEEecCCCC-----------cc-ccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 236 ELI-IGR-PEAVYFYEVDGRG-----------PC-WAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 236 ~li-v~~-~~~I~i~~~~g~~-----------~~-~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
+++ +++ ++.|++|++.... .+ ..+.+| ...+++ .+.++++++ .+++|++||+.++.
T Consensus 269 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-----~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-----KDRGVLFWDKKSGN 343 (393)
T ss_dssp SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-----TTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe-----CCCeEEEEECCCCe
Confidence 755 444 4689999986321 11 234444 234444 466888877 45899999998754
Q ss_pred EE--EeccccceeEE-Eee------cCcEEEEEcCCeEEEEee
Q 037368 297 IA--HSLVVKEVSHM-LCE------WGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 297 i~--~~~~i~~v~~v-~~~------~~~~~vvs~~~~v~~l~~ 330 (823)
.. +..+-..+..+ ++. .+.+++.++.+..+++|.
T Consensus 344 ~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 344 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 32 33343345444 332 355666666565666664
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=4.5e-20 Score=199.45 Aligned_cols=269 Identities=13% Similarity=0.146 Sum_probs=189.2
Q ss_pred CeEEEeeCC---CEEEEEecCCeEEEEc-CC-----CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeE
Q 037368 27 NITCCSSGR---GKVVIGCDDGAVSLLD-RG-----LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCL 97 (823)
Q Consensus 27 ~is~~~~~~---~~l~~gs~dG~i~~~d-~~-----~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~v 97 (823)
.|+|+++++ .+|++|+.||+|++|| .+ +.+.+++++|...|.+++|+|+|++|+|++.|+. |
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~---------i 110 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT---------L 110 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE---------E
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc---------c
Confidence 489988753 4889999999999999 33 2356789999999999999999999999999998 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-e
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-V 176 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~ 176 (823)
++|+.... ......... . ..+..+.+++++.. +++|+.||.+++|+.. ...+.... .
T Consensus 111 ~~~~~~~~----------~~~~~~~~~--~---~~~~~~~~~~~~~~---l~s~s~d~~~~~~d~~----~~~~~~~~~~ 168 (340)
T 4aow_A 111 RLWDLTTG----------TTTRRFVGH--T---KDVLSVAFSSDNRQ---IVSGSRDKTIKLWNTL----GVCKYTVQDE 168 (340)
T ss_dssp EEEETTTT----------EEEEEEECC--S---SCEEEEEECTTSSC---EEEEETTSCEEEECTT----SCEEEEECSS
T ss_pred eEEeeccc----------ceeeeecCC--C---CceeEEEEeecCcc---ceeecCCCeEEEEEeC----CCceEEEEec
Confidence 99998742 122222211 2 23889999999999 9999999999999853 11111111 2
Q ss_pred cCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEecCCC
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDGR 253 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g~ 253 (823)
.+...|+.++|++++....++++ .++.|++|++... .....+.+|...+.+++|+|++.+++ |+ ++.|++|++...
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 34678999999987643344444 4567999999754 35566777888999999999987554 44 468999998754
Q ss_pred CccccccCC--eEEEEee-CcEEEEEEecCCCCccEEEEEeCCCCEEEEecc-----------ccceeEE-EeecCcEEE
Q 037368 254 GPCWAFEGE--KKLLGWF-RGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLV-----------VKEVSHM-LCEWGNIIL 318 (823)
Q Consensus 254 ~~~~~~~g~--~~~i~~~-~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~-----------i~~v~~v-~~~~~~~~v 318 (823)
.....+.++ ...+.+. ..++++++. +++|+|||+.++....... ...+..+ +++++.+++
T Consensus 248 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 322 (340)
T 4aow_A 248 KHLYTLDGGDIINALCFSPNRYWLCAAT-----GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 322 (340)
T ss_dssp EEEEEEECSSCEEEEEECSSSSEEEEEE-----TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE
T ss_pred ceeeeecCCceEEeeecCCCCceeeccC-----CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE
Confidence 333344443 3344443 235555553 5899999998876543221 1224444 677788777
Q ss_pred EEcCCeEEEEeecC
Q 037368 319 VMTDKSVLCIGEKD 332 (823)
Q Consensus 319 vs~~~~v~~l~~~~ 332 (823)
.++.+..+++|...
T Consensus 323 sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 323 AGYTDNLVRVWQVT 336 (340)
T ss_dssp EEETTSCEEEEEEE
T ss_pred EEeCCCEEEEEeCC
Confidence 76665566776543
No 39
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.88 E-value=2.3e-20 Score=203.77 Aligned_cols=238 Identities=12% Similarity=0.147 Sum_probs=168.1
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCC--eeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGL--KFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~--~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
..|+|++++ +.+|++|+.||+|++|+ ..+ +.+.++.+|.+.|.+++|+|++++|+|+|.|++ |++|
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~---------v~iw 132 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS---------VWVW 132 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC---------EEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe---------EEEE
Confidence 358888764 35899999999999999 433 567789999999999999999999999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccc-ceeEEecCC
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERIT-RFKLQVDNQ 179 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~-k~~~~~~~~ 179 (823)
|+.... ...++..+..+ ..+ |++++|+|++.. +|+|+.||+|++|+.. .... ....+..+.
T Consensus 133 d~~~~~-------~~~~~~~~~~h--~~~---v~~~~~~p~~~~---l~s~s~d~~i~~w~~~---~~~~~~~~~~~~h~ 194 (345)
T 3fm0_A 133 EVDEED-------EYECVSVLNSH--TQD---VKHVVWHPSQEL---LASASYDDTVKLYREE---EDDWVCCATLEGHE 194 (345)
T ss_dssp EECTTS-------CEEEEEEECCC--CSC---EEEEEECSSSSC---EEEEETTSCEEEEEEE---TTEEEEEEEECCCS
T ss_pred ECCCCC-------CeEEEEEecCc--CCC---eEEEEECCCCCE---EEEEeCCCcEEEEEec---CCCEEEEEEecCCC
Confidence 997432 22344444322 334 999999999999 9999999999999853 1111 112334567
Q ss_pred CCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCC--------------cceEEcc-CCCccceecccCCCe-EEEee-
Q 037368 180 CSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPP--------------KRQFLDN-IGCSTNSVAMSDRLE-LIIGR- 241 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~--------------~~~~l~~-~~~~~~~~~~s~~~~-liv~~- 241 (823)
++|++|+|+|+|+ .|+++ .++.|++|+...... ....+.+ |...+.+++|+|++. +++++
T Consensus 195 ~~v~~l~~sp~g~--~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 195 STVWSLAFDPSGQ--RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp SCEEEEEECTTSS--EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET
T ss_pred CceEEEEECCCCC--EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC
Confidence 8999999999984 45555 456799999742211 0112322 667788999999776 55554
Q ss_pred CCeEEEEecCCCC----ccc-----cccCC---eEEEEeeC---cEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 242 PEAVYFYEVDGRG----PCW-----AFEGE---KKLLGWFR---GYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 242 ~~~I~i~~~~g~~----~~~-----~~~g~---~~~i~~~~---~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
++.|++|+.+... +.+ ...+| ...++|.. .++++++ .|++|++|++.++..
T Consensus 273 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s-----~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 273 DDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS-----DDGEVAFWKYQRPEG 338 (345)
T ss_dssp TSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE-----TTSCEEEEEECC---
T ss_pred CCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC-----CCCcEEEEEecCCCC
Confidence 4689999876432 111 12344 45677753 3677776 468999999977553
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1e-19 Score=193.88 Aligned_cols=266 Identities=12% Similarity=0.053 Sum_probs=188.7
Q ss_pred CCeEEEeeC-CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 26 GNITCCSSG-RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 26 ~~is~~~~~-~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|+|++++ ++.|++|+.||.|++|| .+++....+.+|.+.|.+++|+|++++|++++.|++ |++|++.
T Consensus 19 ~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---------i~~~~~~ 89 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTM---------INGVPLF 89 (313)
T ss_dssp SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSC---------EEEEETT
T ss_pred CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCe---------EEEEEee
Confidence 458888874 46899999999999999 778888899999999999999999999999999998 9999998
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcc
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVM 183 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It 183 (823)
... .+.++..+..+ ..+ |++++|+ +.. +++|+.||.|++|+. +.....+..+..+|+
T Consensus 90 ~~~-------~~~~~~~~~~~--~~~---i~~~~~~--~~~---l~~~~~d~~i~~~d~------~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 90 ATS-------GEDPLYTLIGH--QGN---VCSLSFQ--DGV---VISGSWDKTAKVWKE------GSLVYNLQAHNASVW 146 (313)
T ss_dssp CCT-------TSCC-CEECCC--SSC---EEEEEEE--TTE---EEEEETTSEEEEEET------TEEEEEEECCSSCEE
T ss_pred ecC-------CCCcccchhhc--ccC---EEEEEec--CCE---EEEEeCCCCEEEEcC------CcEEEecccCCCcee
Confidence 532 12233344322 334 9999994 458 999999999999982 122333445688999
Q ss_pred eEEEee-cCCeEEEEEEcCCeEEEEEecCCCCcceEEcc-CCCccceecccCCCeEEEeeC-CeEEEEecCCCCcccccc
Q 037368 184 GLGFRV-DGQALQLFAVTPNSVILFSLQNQPPKRQFLDN-IGCSTNSVAMSDRLELIIGRP-EAVYFYEVDGRGPCWAFE 260 (823)
Q Consensus 184 ~l~fs~-dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~-~~~~~~~~~~s~~~~liv~~~-~~I~i~~~~g~~~~~~~~ 260 (823)
++.|.+ +++ .++.++.++.|++||.. .....+.. +...+.+++|+|++.+++++. +.|++|+++.......+.
T Consensus 147 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 147 DAKVVSFSEN-KFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEccCCCC-EEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh
Confidence 999998 553 34444455679999933 23455554 777889999999999777654 589999987443334444
Q ss_pred CC---eEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCEEEE--eccccceeEE-EeecCcEEEEEcCCeEEEEeecCh
Q 037368 261 GE---KKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLIAH--SLVVKEVSHM-LCEWGNIILVMTDKSVLCIGEKDM 333 (823)
Q Consensus 261 g~---~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i~~--~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~~ 333 (823)
++ ...+.+..+ ++++++ .+++|++||+.++.... ..+-..+..+ +++++.+++.+.++ .++++....
T Consensus 223 ~~~~~i~~~~~~~~~~l~~~~-----~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg-~i~iw~~~~ 296 (313)
T 3odt_A 223 GHESFVYCIKLLPNGDIVSCG-----EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDN-LVRIFSQEK 296 (313)
T ss_dssp CCSSCEEEEEECTTSCEEEEE-----TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTS-CEEEEESCG
T ss_pred cCCceEEEEEEecCCCEEEEe-----cCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCC-cEEEEeCCC
Confidence 44 456666533 666666 46899999997765433 2332335554 66777766555555 445554443
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.87 E-value=2.7e-20 Score=219.59 Aligned_cols=226 Identities=12% Similarity=0.094 Sum_probs=166.2
Q ss_pred eeCC-CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCC
Q 037368 32 SSGR-GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEG 109 (823)
Q Consensus 32 ~~~~-~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~ 109 (823)
++++ +.|++|+ +++|++|+ .+++..+.|.+|...|++++|+|+|++|||+|.|++ |+|||+...
T Consensus 26 ~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~---------v~lWd~~~~---- 91 (611)
T 1nr0_A 26 NTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN---------VRIWDTTQT---- 91 (611)
T ss_dssp ECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSE---------EEEEESSST----
T ss_pred eCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCC---------EEEeECCCC----
Confidence 3344 5788887 67999999 668888899999999999999999999999999998 999999632
Q ss_pred CCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEcccccccccceeEEecCCCCcceE
Q 037368 110 TSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIARERITRFKLQVDNQCSVMGL 185 (823)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~~~~~k~~~~~~~~~~It~l 185 (823)
...+..++..+ ..+ |.+++|+||++. +|+++.+ |.|.+|+. +.....+..+..+|+++
T Consensus 92 ----~~~~~~~~~~~--~~~---v~~v~fs~dg~~---l~~~~~~~~~~~~v~~wd~------~~~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 92 ----THILKTTIPVF--SGP---VKDISWDSESKR---IAAVGEGRERFGHVFLFDT------GTSNGNLTGQARAMNSV 153 (611)
T ss_dssp ----TCCEEEEEECS--SSC---EEEEEECTTSCE---EEEEECCSSCSEEEEETTT------CCBCBCCCCCSSCEEEE
T ss_pred ----cceeeEeeccc--CCc---eEEEEECCCCCE---EEEEECCCCceeEEEEeeC------CCCcceecCCCCCceEE
Confidence 22234455433 334 999999999999 9888764 47888863 11223344567899999
Q ss_pred EEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcccccc--
Q 037368 186 GFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFE-- 260 (823)
Q Consensus 186 ~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~-- 260 (823)
+|+|++. ..+++++ ++.|++|+.... .....+.+|...+.+++|+|+|+++ +++ |+.|++|+.........+.
T Consensus 154 ~f~p~~~-~~l~s~s~D~~v~lwd~~~~-~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 154 DFKPSRP-FRIISGSDDNTVAIFEGPPF-KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp EECSSSS-CEEEEEETTSCEEEEETTTB-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCT
T ss_pred EECCCCC-eEEEEEeCCCeEEEEECCCC-eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccc
Confidence 9999974 3355554 567999997642 3556778888899999999999855 444 5699999976322212221
Q ss_pred -----CC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 261 -----GE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 261 -----g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
+| ...++| .+.++++++ .|++|+|||+.+..
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s-----~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASAS-----ADKTIKIWNVATLK 272 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTE
T ss_pred cccccccCCCEEEEEECCCCCEEEEEe-----CCCeEEEEeCCCCc
Confidence 34 445555 567888887 45899999997643
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=7.3e-20 Score=199.32 Aligned_cols=242 Identities=10% Similarity=0.109 Sum_probs=176.4
Q ss_pred CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCce
Q 037368 54 LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKI 133 (823)
Q Consensus 54 ~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 133 (823)
.+..+++++|.++|++++|+|++++|+|+|.|++ |+|||+... .++.++..+ ..+ |
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~---------v~iWd~~~~----------~~~~~~~~~--~~~---v 100 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGK---------LIIWDSYTT----------NKVHAIPLR--SSW---V 100 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE---------EEEEETTTC----------CEEEEEECS--SSC---E
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCc---------EEEEECCCC----------CcceEeecC--Ccc---E
Confidence 4556789999999999999999999999999998 999998742 255565533 233 9
Q ss_pred EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccc-eeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCC
Q 037368 134 TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITR-FKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQ 212 (823)
Q Consensus 134 ~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k-~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~ 212 (823)
.+++|+|+++. +|+|+.||.|++|+..- .+...+ ...+..+.++|+++.|++++ .++.++.++.|++||+...
T Consensus 101 ~~~~~s~~~~~---l~s~~~d~~v~iw~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~ 174 (340)
T 1got_B 101 MTCAYAPSGNY---VACGGLDNICSIYNLKT-REGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETG 174 (340)
T ss_dssp EEEEECTTSSE---EEEEETTCEEEEEETTT-CSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTT
T ss_pred EEEEECCCCCE---EEEEeCCCeEEEEECcc-CCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCC
Confidence 99999999999 99999999999998631 100111 22234567899999999987 4555556778999999754
Q ss_pred CCcceEEccCCCccceecccCCCeEEE-ee-CCeEEEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCcc
Q 037368 213 PPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKN 285 (823)
Q Consensus 213 ~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~ 285 (823)
.....+.+|...+.+++|+|++.+++ |+ ++.|++|+++.......+.+| ...+.+ .+.++++++ .++
T Consensus 175 -~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-----~d~ 248 (340)
T 1got_B 175 -QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS-----DDA 248 (340)
T ss_dssp -EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE-----TTS
T ss_pred -cEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc-----CCC
Confidence 35567778888899999999987554 44 568999998743333455555 344555 567888887 458
Q ss_pred EEEEEeCCCCEEEEec----cccceeEE-EeecCcEEEEEcCCeEEEEeec
Q 037368 286 IFNVYDLKNRLIAHSL----VVKEVSHM-LCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 286 ~I~I~D~~~~~i~~~~----~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
+|+|||+......... ....+..+ +++.+.+++.++.+..++++..
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 9999999876543222 11234444 7778888877776666677643
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.87 E-value=6.8e-20 Score=196.47 Aligned_cols=232 Identities=15% Similarity=0.178 Sum_probs=169.5
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|++++.+ ++.|++|+.||.|++|| .+++.+..+++|...|.++.|+|++++|+|++.|++ |++||+
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~---------i~iwd~ 136 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES---------VRIWDV 136 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSC---------EEEEET
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCc---------EEEEEC
Confidence 358777764 35899999999999999 778888899999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCS 181 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~ 181 (823)
... .++..+..+ ..+ |++++|+|++.. +++|+.||.|++|+.. .+.....+. ....+
T Consensus 137 ~~~----------~~~~~~~~~--~~~---v~~~~~~~~~~~---l~~~~~d~~i~~wd~~----~~~~~~~~~~~~~~~ 194 (312)
T 4ery_A 137 KTG----------KCLKTLPAH--SDP---VSAVHFNRDGSL---IVSSSYDGLCRIWDTA----SGQCLKTLIDDDNPP 194 (312)
T ss_dssp TTC----------CEEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----TCCEEEEECCSSCCC
T ss_pred CCC----------EEEEEecCC--CCc---EEEEEEcCCCCE---EEEEeCCCcEEEEECC----CCceeeEEeccCCCc
Confidence 742 355555433 344 999999999999 9999999999999863 122222232 34678
Q ss_pred cceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCcccee--ccc-CCCeEE-Eee-CCeEEEEecCCCCcc
Q 037368 182 VMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSV--AMS-DRLELI-IGR-PEAVYFYEVDGRGPC 256 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~--~~s-~~~~li-v~~-~~~I~i~~~~g~~~~ 256 (823)
|+.++|+|+++ .++..+.++.|++||+... .....+..|.....++ .++ +++.++ +|+ ++.|++|++......
T Consensus 195 ~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 195 VSFVKFSPNGK-YILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp EEEEEECTTSS-EEEEEETTTEEEEEETTTT-EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred eEEEEECCCCC-EEEEEcCCCeEEEEECCCC-cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 99999999985 3444445667999999753 3445555555444332 333 566654 444 458999999854444
Q ss_pred ccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 257 WAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 257 ~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
..+.+| ...++| .+.++++++.+ .|++|++|+.+
T Consensus 273 ~~~~~h~~~v~~~~~~p~~~~l~s~~~~---~d~~i~~W~~d 311 (312)
T 4ery_A 273 QKLQGHTDVVISTACHPTENIIASAALE---NDKTIKLWKSD 311 (312)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEECT---TTCCEEEEECC
T ss_pred hhhhccCCcEEEEeecCcCCceEEEEcc---CCccEEEecCC
Confidence 456665 334555 46678777643 47899999864
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.87 E-value=1.3e-20 Score=203.19 Aligned_cols=234 Identities=12% Similarity=0.103 Sum_probs=166.4
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCCe--eeEeEeecccceeEEEEec--CCCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLK--QRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~--~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|++++ +.+|++|+.||+|++|| .+++ .+.++++|.++|.+++|++ ++++|+|+|.|++ |+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~---------v~ 84 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK---------VI 84 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC---------EE
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE---------EE
Confidence 358888764 36899999999999999 5543 5678999999999999975 4899999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccccce---e
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERITRF---K 173 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~---~ 173 (823)
|||+... ...++.++..+ ..+ |++++|+|+ +.. +|+|+.||+|++|+.. .+... .
T Consensus 85 iWd~~~~--------~~~~~~~~~~h--~~~---V~~v~~~p~~~g~~---lasgs~D~~i~lwd~~----~~~~~~~~~ 144 (316)
T 3bg1_A 85 IWREENG--------TWEKSHEHAGH--DSS---VNSVCWAPHDYGLI---LACGSSDGAISLLTYT----GEGQWEVKK 144 (316)
T ss_dssp EECCSSS--------CCCEEEEECCC--SSC---CCEEEECCTTTCSC---EEEECSSSCEEEEEEC----SSSCEEECC
T ss_pred EEECCCC--------cceEEEEccCC--CCc---eEEEEECCCCCCcE---EEEEcCCCCEEEEecC----CCCCcceee
Confidence 9999742 22234444322 334 999999998 778 9999999999999853 11111 1
Q ss_pred EEecCCCCcceEEEeecCC---------------eEEEEEEc-CCeEEEEEecCCC--CcceEEccCCCccceecccCCC
Q 037368 174 LQVDNQCSVMGLGFRVDGQ---------------ALQLFAVT-PNSVILFSLQNQP--PKRQFLDNIGCSTNSVAMSDRL 235 (823)
Q Consensus 174 ~~~~~~~~It~l~fs~dg~---------------~~~l~~~t-~~~V~~~d~~~~~--~~~~~l~~~~~~~~~~~~s~~~ 235 (823)
....+..+|++++|+|++. ...+++++ ++.|++||+.... .+...+.+|...+.+++|+|++
T Consensus 145 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence 1223467899999998731 02344444 5679999996432 2344567788889999999975
Q ss_pred ----e-EEEee-CCeEEEEecCCC--Cc--cc---cccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 236 ----E-LIIGR-PEAVYFYEVDGR--GP--CW---AFEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 236 ----~-liv~~-~~~I~i~~~~g~--~~--~~---~~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
. +++++ |++|++|+++.. +. .. .+++....++| .+.+|++++ .|++|+||+..
T Consensus 225 ~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~-----~D~~v~lw~~~ 292 (316)
T 3bg1_A 225 GLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG-----GDNKVTLWKES 292 (316)
T ss_dssp SCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE-----SSSCEEEEEEC
T ss_pred CCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc-----CCCeEEEEEEC
Confidence 4 55554 569999998642 11 11 22334455665 466888777 45899999975
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=4.9e-20 Score=203.55 Aligned_cols=274 Identities=13% Similarity=0.074 Sum_probs=187.0
Q ss_pred CCeEEEeeCC---CEEEEEecCCeEEEEc-CCCeeeEeEe--ecccceeEEEEec-CCCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSGR---GKVVIGCDDGAVSLLD-RGLKFNFGFQ--AHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~~---~~l~~gs~dG~i~~~d-~~~~~~~~~~--~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|+++++ ..|++|+.||.|++|| .+++....++ +|.+.|.+++|+| ++++|+|++.|++ |+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~---------i~ 144 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA---------TT 144 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE---------EE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE---------EE
Confidence 4588888653 4899999999999999 5566555555 6999999999999 7899999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecC
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDN 178 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~ 178 (823)
+||+... ++..+..+. .. ...|++++|+|++.. +|+|+.||.|++|+.. +.....+..+
T Consensus 145 iwd~~~~-----------~~~~~~~~~-~~-~~~v~~~~~~~~~~~---l~~~~~d~~i~i~d~~-----~~~~~~~~~h 203 (383)
T 3ei3_B 145 LRDFSGS-----------VIQVFAKTD-SW-DYWYCCVDVSVSRQM---LATGDSTGRLLLLGLD-----GHEIFKEKLH 203 (383)
T ss_dssp EEETTSC-----------EEEEEECCC-CS-SCCEEEEEEETTTTE---EEEEETTSEEEEEETT-----SCEEEEEECS
T ss_pred EEECCCC-----------ceEEEeccC-CC-CCCeEEEEECCCCCE---EEEECCCCCEEEEECC-----CCEEEEeccC
Confidence 9999831 344444221 11 133999999999999 9999999999999862 2334445567
Q ss_pred CCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCC---CcceEEccCCCccceecccC-CCeEE-Eee-CCeEEEEecC
Q 037368 179 QCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQP---PKRQFLDNIGCSTNSVAMSD-RLELI-IGR-PEAVYFYEVD 251 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~---~~~~~l~~~~~~~~~~~~s~-~~~li-v~~-~~~I~i~~~~ 251 (823)
.++|++++|+|+++ ..+++++ ++.|++||+.... .....+ .|...+.+++|+| ++.++ +++ ++.|++|++.
T Consensus 204 ~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 204 KAKVTHAEFNPRCD-WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp SSCEEEEEECSSCT-TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred CCcEEEEEECCCCC-CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 88999999999984 2455554 5679999997522 233444 5778899999999 88755 444 4699999986
Q ss_pred CCCccccccCC-----------eEEEEeeCcEEEEE-EecCC---CCccEEEEEeCCCCEEEEeccc---cc-eeE-EEe
Q 037368 252 GRGPCWAFEGE-----------KKLLGWFRGYLLCV-IADQR---NSKNIFNVYDLKNRLIAHSLVV---KE-VSH-MLC 311 (823)
Q Consensus 252 g~~~~~~~~g~-----------~~~i~~~~~ylv~~-s~d~~---~~~~~I~I~D~~~~~i~~~~~i---~~-v~~-v~~ 311 (823)
.......+.++ .....+.+..+++. ++++. +.+++|+|||+.++........ .. +.. .++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s 361 (383)
T 3ei3_B 282 DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFS 361 (383)
T ss_dssp BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEEC
T ss_pred CCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEe
Confidence 32221222211 11122234444443 22221 2578999999976554332221 22 333 377
Q ss_pred ecCcEEEEEcCCeEEEEeecC
Q 037368 312 EWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 312 ~~~~~~vvs~~~~v~~l~~~~ 332 (823)
+++.+++.++++ .++++..+
T Consensus 362 ~~g~~l~s~sd~-~i~iw~~~ 381 (383)
T 3ei3_B 362 PTGDVLASGMGF-NILIWNRE 381 (383)
T ss_dssp TTSSEEEEEETT-EEEEEECC
T ss_pred cCccEEEEecCC-cEEEEecC
Confidence 788888777755 55666443
No 46
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=2e-19 Score=193.66 Aligned_cols=265 Identities=13% Similarity=0.092 Sum_probs=182.5
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCe---eeEeEe--ecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLK---FNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~---~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
...|+|++.++ .++++|+ ||.|++|+ .+++ ....+. +|...|.+++|+|++++|++++.|++
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------- 120 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST--------- 120 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE---------
T ss_pred CCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc---------
Confidence 34577777643 4778887 99999999 4333 333444 78999999999999999999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
|++||+... .+.....+..+ ..+ |++++|+|+++. +++|+.||.|.+|+.. .+.....+.
T Consensus 121 i~~~d~~~~--------~~~~~~~~~~~--~~~---i~~~~~~~~~~~---l~~~~~dg~v~~~d~~----~~~~~~~~~ 180 (337)
T 1gxr_A 121 LSIWDLAAP--------TPRIKAELTSS--APA---CYALAISPDSKV---CFSCCSDGNIAVWDLH----NQTLVRQFQ 180 (337)
T ss_dssp EEEEECCCC----------EEEEEEECS--SSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----TTEEEEEEC
T ss_pred EEEEECCCC--------CcceeeecccC--CCc---eEEEEECCCCCE---EEEEeCCCcEEEEeCC----CCceeeeee
Confidence 999999843 22233333322 333 999999999999 9999999999999863 122223334
Q ss_pred cCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCC
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGR 253 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~ 253 (823)
.+.++|++++|+|+++ .++++ .++.|++||+.... ....+. +...+.+++|+|++.++ ++. ++.|++|+..+.
T Consensus 181 ~~~~~i~~~~~~~~~~--~l~~~~~dg~i~~~d~~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 181 GHTDGASCIDISNDGT--KLWTGGLDNTVRSWDLREGR-QLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp CCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE-EEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred cccCceEEEEECCCCC--EEEEEecCCcEEEEECCCCc-eEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 4678999999999984 45555 45679999997542 333343 55678899999988755 444 468999998753
Q ss_pred CccccccCC---eEEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEEEEec-cccceeEE-EeecCcEEEEEcCCeEE
Q 037368 254 GPCWAFEGE---KKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL-VVKEVSHM-LCEWGNIILVMTDKSVL 326 (823)
Q Consensus 254 ~~~~~~~g~---~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~-~i~~v~~v-~~~~~~~~vvs~~~~v~ 326 (823)
. ...+.++ ...+.|. +.++++++ .+++|++||+.++...... +-..+..+ +++++..++++..+..+
T Consensus 257 ~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 257 D-KYQLHLHESCVLSLKFAYCGKWFVSTG-----KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp C-EEEECCCSSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred C-eEEEcCCccceeEEEECCCCCEEEEec-----CCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 3 2333333 4455554 67888777 4589999999876544332 22224444 66777766665544444
Q ss_pred EEe
Q 037368 327 CIG 329 (823)
Q Consensus 327 ~l~ 329 (823)
+++
T Consensus 331 ~iw 333 (337)
T 1gxr_A 331 TVY 333 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 47
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=1.1e-19 Score=201.36 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=172.2
Q ss_pred CCCeEEEeeCCCEEEEEecCCeEEEEc-CCCe------eeEeEeecccceeEEEEecC----C---CEEEEEecCCCCcc
Q 037368 25 SGNITCCSSGRGKVVIGCDDGAVSLLD-RGLK------FNFGFQAHSSSVLFLQQLKQ----R---NFLVTVGEDEQVSA 90 (823)
Q Consensus 25 ~~~is~~~~~~~~l~~gs~dG~i~~~d-~~~~------~~~~~~~H~~~V~~i~~~~~----~---~~l~s~s~D~~~~~ 90 (823)
...|+|++++++.|++|+.||+|++|+ .+++ ...++.+|..+|.+++|+|+ | ++|++++.|++
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~--- 92 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD--- 92 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC---
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC---
Confidence 346899998889999999999999999 5555 67789999999999999999 9 99999999998
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEe----cCCCCcceEEEEEeCCeEEEEEccccc
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVL----EEAPPILLIAIGLDNGCIYCIKGDIAR 166 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~----~d~~~~~~ia~G~~dG~V~l~~~~~~~ 166 (823)
|++||+..... .....++.+..+....+...|++++|+ |++.. .+++|+.||.|++|+..-..
T Consensus 93 ------i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 93 ------LLFYRITREDE-----TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH--RLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp ------EEEEEEEECTT-----TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE--EEEEEETTSCEEEEEEESSS
T ss_pred ------EEEEEccCCcc-----cccccceeecccccccCCCcEEEEEEeeccCCCCce--EEEEEeCCCcEEEEeCCccc
Confidence 99999985320 000114444422100001339999999 88642 17888899999999864100
Q ss_pred c--ccccee-----EE-------ecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEcc---C---CCcc
Q 037368 167 E--RITRFK-----LQ-------VDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDN---I---GCST 226 (823)
Q Consensus 167 ~--~~~k~~-----~~-------~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~---~---~~~~ 226 (823)
. .+.... .+ ..+..+|++++|++++ .++..+.++.|++||+... .+...+.. | ...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL-RPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT-EEEEEEECCC---CCCCCE
T ss_pred cccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC-ceeEEEeccccccccCCcc
Confidence 0 011111 23 2247889999999987 3333334567999999753 35566666 7 7889
Q ss_pred ceecccCCCeEE-Eee-C---CeEEEEecCCCCccccccC-------------C---eEEEEe--eCcEEEEEEecCCCC
Q 037368 227 NSVAMSDRLELI-IGR-P---EAVYFYEVDGRGPCWAFEG-------------E---KKLLGW--FRGYLLCVIADQRNS 283 (823)
Q Consensus 227 ~~~~~s~~~~li-v~~-~---~~I~i~~~~g~~~~~~~~g-------------~---~~~i~~--~~~ylv~~s~d~~~~ 283 (823)
.+++|+|++.++ +++ + +.|++|++........+.+ + ...+.| .+.++++++ .
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~ 311 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-----W 311 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-----T
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-----C
Confidence 999999988755 444 4 5899999874333333433 3 445555 467888887 4
Q ss_pred ccEEEEEeCCCCEEE
Q 037368 284 KNIFNVYDLKNRLIA 298 (823)
Q Consensus 284 ~~~I~I~D~~~~~i~ 298 (823)
+++|+|||+.+....
T Consensus 312 dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 312 DGKLRFWDVKTKERI 326 (397)
T ss_dssp TSEEEEEETTTTEEE
T ss_pred CCeEEEEEcCCCcee
Confidence 589999999876543
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.8e-20 Score=203.08 Aligned_cols=269 Identities=11% Similarity=0.061 Sum_probs=190.6
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
.|+|+++++ .+|++|+.||.|++||.+++.+..+.+|...|.+++|+|++++|++++.|++ |++||+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------i~iwd~~~ 180 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENV---------TILWNVIS 180 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCC---------EEEEETTT
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCe---------EEEEECCC
Confidence 688888753 5899999999999999888888899999999999999999999999999998 99999974
Q ss_pred CCCCCCCCCCCceEEEEEeccCC---------CC-CCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeE
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQ---------FP-EAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~---------~p-~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~ 174 (823)
. .++..+..+... .+ +..+.+++|+|++ . +++|+.+|.|.+|+.. .+.....
T Consensus 181 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~g~i~~~d~~----~~~~~~~ 242 (425)
T 1r5m_A 181 G----------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-K---FVIPGPKGAIFVYQIT----EKTPTGK 242 (425)
T ss_dssp T----------EEEEEECCC---------------CCCBSCCEEEETT-E---EEEECGGGCEEEEETT----CSSCSEE
T ss_pred C----------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-E---EEEEcCCCeEEEEEcC----CCceeee
Confidence 3 233333321100 00 0128899999984 6 8888999999999863 1222333
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCC
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDG 252 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g 252 (823)
+..+..+|++++|+++++ .+++++ ++.|++|++... .....+..|...+.+++|+|++.+++++ ++.|++|++..
T Consensus 243 ~~~~~~~i~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~ 319 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNK--LLLSASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQ 319 (425)
T ss_dssp ECCCSSCEEEEEEETTTT--EEEEEETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTT
T ss_pred eccCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCC
Confidence 445678999999999985 455554 567999998754 3566677788889999999999666655 46899999874
Q ss_pred CCccccccC---CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE--------------------EE--Eecccc-
Q 037368 253 RGPCWAFEG---EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL--------------------IA--HSLVVK- 304 (823)
Q Consensus 253 ~~~~~~~~g---~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~--------------------i~--~~~~i~- 304 (823)
......+.+ ....+.| .+.++++++ .+++|+|||+.+.. .. +..+..
T Consensus 320 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (425)
T 1r5m_A 320 NTLLALSIVDGVPIFAGRISQDGQKYAVAF-----MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN 394 (425)
T ss_dssp TEEEEEEECTTCCEEEEEECTTSSEEEEEE-----TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCC
T ss_pred CcEeEecccCCccEEEEEEcCCCCEEEEEE-----CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC
Confidence 333233333 3445555 467888877 45899999996543 22 233322
Q ss_pred -ceeEE-EeecCcEEEEEcCCeEEEEee
Q 037368 305 -EVSHM-LCEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 305 -~v~~v-~~~~~~~~vvs~~~~v~~l~~ 330 (823)
.+..+ +++.+..++++..+..++++.
T Consensus 395 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 395 DYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp CCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred CceEEEEccCCCceEEEEecCceEEEEe
Confidence 45544 667777666655444445543
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.6e-21 Score=211.40 Aligned_cols=243 Identities=14% Similarity=0.133 Sum_probs=171.1
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CC----CeeeEeEeecccceeEEEEecC-CCEEEEEecCCCCccccccee
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RG----LKFNFGFQAHSSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~----~~~~~~~~~H~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~~~~~ 96 (823)
...|+|+++++ .+|++|+.||.|++|+ .+ .+.+..+.+|.+.|++++|+|+ +++|+|++.|++
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~--------- 137 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE--------- 137 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSC---------
T ss_pred CCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCe---------
Confidence 45688888743 5899999999999999 33 3477889999999999999998 899999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC-CCCcceEEEEEeCCeEEEEEcccccccccceeEE
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE-APPILLIAIGLDNGCIYCIKGDIARERITRFKLQ 175 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d-~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~ 175 (823)
|++||+........ ...+..+.... .+. ..|++++|+|+ +.. +++|+.||.|++|+.. .+.....+
T Consensus 138 v~iwd~~~~~~~~~-~~~~~~~~~~~--~~~---~~v~~~~~~~~~~~~---l~~~~~dg~v~iwd~~----~~~~~~~~ 204 (416)
T 2pm9_A 138 IFIWDMNKCTESPS-NYTPLTPGQSM--SSV---DEVISLAWNQSLAHV---FASAGSSNFASIWDLK----AKKEVIHL 204 (416)
T ss_dssp EEBCBTTTTSSCTT-TCCCBCCCCSC--CSS---CCCCEEEECSSCTTE---EEEESSSSCEEEEETT----TTEEEEEE
T ss_pred EEEEECCCCccccc-ccccccccccc--CCC---CCeeEEEeCCCCCcE---EEEEcCCCCEEEEECC----CCCcceEE
Confidence 99999985420000 00111110001 112 33999999999 678 9999999999999863 11122222
Q ss_pred ecC------CCCcceEEEeecCCeEEEEEEcC-C---eEEEEEecCCCCcceEEc-cCCCccceecccC-CCeEE-Eee-
Q 037368 176 VDN------QCSVMGLGFRVDGQALQLFAVTP-N---SVILFSLQNQPPKRQFLD-NIGCSTNSVAMSD-RLELI-IGR- 241 (823)
Q Consensus 176 ~~~------~~~It~l~fs~dg~~~~l~~~t~-~---~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~-~~~li-v~~- 241 (823)
..+ ..+|++++|+|++. ..+++++. + .|++||+.....+...+. .|...+.+++|+| ++.++ +++
T Consensus 205 ~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 205 SYTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp CCCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred eccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 222 67899999999974 34555554 4 899999986444566676 7888899999998 77644 444
Q ss_pred CCeEEEEecCCCCccccccCC---eEEEEee--C-cEEEEEEecCCCCccEEEEEeCCCC
Q 037368 242 PEAVYFYEVDGRGPCWAFEGE---KKLLGWF--R-GYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 242 ~~~I~i~~~~g~~~~~~~~g~---~~~i~~~--~-~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
++.|++|+++.......+.+| ...+.|. + .++++++ .+++|+|||+.+.
T Consensus 284 dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-----~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 284 DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS-----FDNKIEVQTLQNL 338 (416)
T ss_dssp SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC-----SSSEEEEEESCCC
T ss_pred CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe-----cCCcEEEEEccCC
Confidence 468999998754333444444 3345554 4 5666665 4689999999753
No 50
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.85 E-value=9.2e-20 Score=218.37 Aligned_cols=230 Identities=13% Similarity=0.124 Sum_probs=166.6
Q ss_pred CeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.|+|++++ +.+|++|+.||+|++|| .+++.++.+.+|.+.|.+++|+|++++|+|+|.|++ |+|||+.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~---------i~iwd~~ 502 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT---------IKLWNTL 502 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSC---------EEEECTT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCE---------EEEEECC
Confidence 47777764 35889999999999999 788888999999999999999999999999999998 9999986
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC--CCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA--PPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS 181 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~--~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~ 181 (823)
.. +...+......+. ..|++++|+|++ .. +++|+.||+|++|+.. .......+..+.++
T Consensus 503 ~~-----------~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~---l~s~s~d~~v~vwd~~----~~~~~~~~~~h~~~ 563 (694)
T 3dm0_A 503 GE-----------CKYTISEGGEGHR-DWVSCVRFSPNTLQPT---IVSASWDKTVKVWNLS----NCKLRSTLAGHTGY 563 (694)
T ss_dssp SC-----------EEEEECSSTTSCS-SCEEEEEECSCSSSCE---EEEEETTSCEEEEETT----TCCEEEEECCCSSC
T ss_pred CC-----------cceeeccCCCCCC-CcEEEEEEeCCCCcce---EEEEeCCCeEEEEECC----CCcEEEEEcCCCCC
Confidence 31 2222221111111 339999999987 46 9999999999999863 12222334456889
Q ss_pred cceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeCCeEEEEecCCCCccccc
Q 037368 182 VMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRPEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~~~I~i~~~~g~~~~~~~ 259 (823)
|++++|+|+|+ .+++++ ++.|++||+.... ....+. +...+.+++|+|++.+++ +.+++|++|+++.......+
T Consensus 564 v~~v~~spdg~--~l~sg~~Dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 564 VSTVAVSPDGS--LCASGGKDGVVLLWDLAEGK-KLYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp EEEEEECTTSS--EEEEEETTSBCEEEETTTTE-EEECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCCC--EEEEEeCCCeEEEEECCCCc-eEEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhh
Confidence 99999999984 455554 5679999997542 223333 345688999999998765 55679999998743221111
Q ss_pred c-------------CC---------eEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 260 E-------------GE---------KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 260 ~-------------g~---------~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
. ++ ...+.| .+.+|++++ .|++|+|||+.
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs-----~Dg~i~iW~i~ 692 (694)
T 3dm0_A 640 KVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY-----TDGVIRVWGIG 692 (694)
T ss_dssp CCCCC----------------CCCCEEEEEECTTSSEEEEEE-----TTSEEEEEEC-
T ss_pred ccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc-----CCCeEEEEecc
Confidence 1 10 123444 577888887 46899999975
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.85 E-value=1.6e-19 Score=196.79 Aligned_cols=266 Identities=9% Similarity=0.036 Sum_probs=183.6
Q ss_pred CCCeEEEeeC------CCEEEEEecCCeEEEEc-CCCeeeEeEeec-----ccceeEEEEecC----CCEEEEEecCCCC
Q 037368 25 SGNITCCSSG------RGKVVIGCDDGAVSLLD-RGLKFNFGFQAH-----SSSVLFLQQLKQ----RNFLVTVGEDEQV 88 (823)
Q Consensus 25 ~~~is~~~~~------~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H-----~~~V~~i~~~~~----~~~l~s~s~D~~~ 88 (823)
...|+|++++ ...+++++.+|.|++|+ .+++.++.++.| ...|.+++|+|+ |++|++++.||+
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~- 96 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGI- 96 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCE-
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCE-
Confidence 3468888876 34678888889999999 667766677754 477999999998 679999999998
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccc
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARE 167 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~ 167 (823)
|++||+... .++..+..+ ..+ |++++|+| ++.. +|+|+.||.|++|+..
T Consensus 97 --------i~v~d~~~~----------~~~~~~~~~--~~~---i~~~~~~~~~~~~---l~s~~~dg~i~iwd~~---- 146 (366)
T 3k26_A 97 --------IRIINPITM----------QCIKHYVGH--GNA---INELKFHPRDPNL---LLSVSKDHALRLWNIQ---- 146 (366)
T ss_dssp --------EEEECTTTC----------CEEEEEESC--CSC---EEEEEECSSCTTE---EEEEETTSCEEEEETT----
T ss_pred --------EEEEEchhc----------eEeeeecCC--CCc---EEEEEECCCCCCE---EEEEeCCCeEEEEEee----
Confidence 999999842 356565533 334 99999999 8899 9999999999999863
Q ss_pred cccceeEE---ecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcce--------------------------
Q 037368 168 RITRFKLQ---VDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQ-------------------------- 217 (823)
Q Consensus 168 ~~~k~~~~---~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~-------------------------- 217 (823)
.+.....+ ..+..+|++++|+|+++ .++++ .++.|++||+.... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGE--KIMSCGMDHSLKLWRINSKR-MMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSS--EEEEEETTSCEEEEESCSHH-HHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred cCeEEEEecccccccCceeEEEECCCCC--EEEEecCCCCEEEEECCCCc-cccccceeEEecCCCCcccccceeeccCc
Confidence 12222233 24578999999999984 45545 45679999987532 111
Q ss_pred --EEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCcc--------------ccccCCe-----EEEEee--CcEE
Q 037368 218 --FLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGPC--------------WAFEGEK-----KLLGWF--RGYL 273 (823)
Q Consensus 218 --~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~~--------------~~~~g~~-----~~i~~~--~~yl 273 (823)
....|...+.|++|+ +..+++++ ++.|++|++...... ..+.++. ..+.+. +.++
T Consensus 224 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp EEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred cccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 112367788899998 44566554 568999998643221 1222221 124455 7788
Q ss_pred EEEEecCCCCccEEEEEeCCCCE-----E-EEecc--ccceeEE-EeecCcEEEEEcCCeEEEEee
Q 037368 274 LCVIADQRNSKNIFNVYDLKNRL-----I-AHSLV--VKEVSHM-LCEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 274 v~~s~d~~~~~~~I~I~D~~~~~-----i-~~~~~--i~~v~~v-~~~~~~~~vvs~~~~v~~l~~ 330 (823)
++++ .+++|+|||+.++. + .+..+ ...+..+ +++++..++.++.+..++++.
T Consensus 303 ~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 303 ALGN-----QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp EEEC-----TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEe-----cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 8776 45899999998642 1 23333 2335554 677777777766555666664
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.85 E-value=2.5e-19 Score=201.95 Aligned_cols=264 Identities=13% Similarity=0.138 Sum_probs=187.3
Q ss_pred CCeEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 26 GNITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
..|.|+.+.++.+++|+.||+|++|| .+++....+.+|.+.|+++++ ++++|+|+|.||+ |++||+..
T Consensus 134 ~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~---------i~vwd~~~ 202 (435)
T 1p22_A 134 KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDST---------VRVWDVNT 202 (435)
T ss_dssp CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC---------EEEEESSS
T ss_pred CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCe---------EEEEECCC
Confidence 45899999889999999999999999 778888999999999999998 7899999999998 99999984
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccc-eeEEecCCCCcc
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITR-FKLQVDNQCSVM 183 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k-~~~~~~~~~~It 183 (823)
. .++.++..+ ..+ |.+++|+++ . +++|+.||.|++|+..- ..... ...+..+.++|+
T Consensus 203 ~----------~~~~~~~~h--~~~---v~~l~~~~~--~---l~s~s~dg~i~vwd~~~--~~~~~~~~~~~~~~~~v~ 260 (435)
T 1p22_A 203 G----------EMLNTLIHH--CEA---VLHLRFNNG--M---MVTCSKDRSIAVWDMAS--PTDITLRRVLVGHRAAVN 260 (435)
T ss_dssp C----------CEEEEECCC--CSC---EEEEECCTT--E---EEEEETTSCEEEEECSS--SSCCEEEEEECCCSSCEE
T ss_pred C----------cEEEEEcCC--CCc---EEEEEEcCC--E---EEEeeCCCcEEEEeCCC--CCCceeeeEecCCCCcEE
Confidence 2 356665533 333 999999864 7 99999999999998631 01111 133445678999
Q ss_pred eEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCccccccCC
Q 037368 184 GLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGPCWAFEGE 262 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~~~~~~g~ 262 (823)
+++| +++ .++.++.++.|++||+... .....+..|...+.|+.++ +..+++|+ ++.|++|+++.......+.+|
T Consensus 261 ~~~~--~~~-~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 261 VVDF--DDK-YIVSASGDRTIKVWNTSTC-EFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp EEEE--ETT-EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEe--CCC-EEEEEeCCCeEEEEECCcC-cEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 9999 342 3444445667999999754 3566677788888888874 34566655 468999998743333455555
Q ss_pred ---eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCC----------EE-EEeccccceeEEEeecCcEEEEEcCCeEEEE
Q 037368 263 ---KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNR----------LI-AHSLVVKEVSHMLCEWGNIILVMTDKSVLCI 328 (823)
Q Consensus 263 ---~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~----------~i-~~~~~i~~v~~v~~~~~~~~vvs~~~~v~~l 328 (823)
...+.+.+.++++++. +++|+|||+.+. .+ .+..+-..+..+.. ++..++.++.+..+++
T Consensus 336 ~~~v~~~~~~~~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~i 409 (435)
T 1p22_A 336 EELVRCIRFDNKRIVSGAY-----DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILI 409 (435)
T ss_dssp SSCEEEEECCSSEEEEEET-----TSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CSSCEEECCSSSEEEE
T ss_pred cCcEEEEEecCCEEEEEeC-----CCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-CCCEEEEEeCCCEEEE
Confidence 4678888889988884 589999998532 22 22233233443322 5566666655556677
Q ss_pred eecCh
Q 037368 329 GEKDM 333 (823)
Q Consensus 329 ~~~~~ 333 (823)
+....
T Consensus 410 wd~~~ 414 (435)
T 1p22_A 410 WDFLN 414 (435)
T ss_dssp EC---
T ss_pred EECCC
Confidence 65443
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.85 E-value=1.1e-19 Score=198.27 Aligned_cols=234 Identities=12% Similarity=0.154 Sum_probs=167.5
Q ss_pred CCeEEEeeCC------CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeE
Q 037368 26 GNITCCSSGR------GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCL 97 (823)
Q Consensus 26 ~~is~~~~~~------~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~v 97 (823)
..|+|++..+ ..|++|+.||.|++|| .+++.+..+.+|...|++++|+| ++++|+|++.|++ |
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~---------i 140 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA---------L 140 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSC---------E
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe---------E
Confidence 4587776643 3789999999999999 77888889999999999999999 9999999999998 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEe-ccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccc--------
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRV-FTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARER-------- 168 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~-------- 168 (823)
++||+... .++..+.. ..+. ..|++++|+|++.. +++|+.||.|++|+..-.+..
T Consensus 141 ~iwd~~~~----------~~~~~~~~~~~~~---~~v~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 204 (366)
T 3k26_A 141 RLWNIQTD----------TLVAIFGGVEGHR---DEVLSADYDLLGEK---IMSCGMDHSLKLWRINSKRMMNAIKESYD 204 (366)
T ss_dssp EEEETTTT----------EEEEEECSTTSCS---SCEEEEEECTTSSE---EEEEETTSCEEEEESCSHHHHHHHHHHHT
T ss_pred EEEEeecC----------eEEEEeccccccc---CceeEEEECCCCCE---EEEecCCCCEEEEECCCCccccccceeEE
Confidence 99999842 24444421 1122 33999999999999 999999999999985310000
Q ss_pred ----c------------cceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCC-------------cceE
Q 037368 169 ----I------------TRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPP-------------KRQF 218 (823)
Q Consensus 169 ----~------------~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~-------------~~~~ 218 (823)
+ ........+.++|++++|+ ++ .++++ .++.|++||+..... ....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~--~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 280 (366)
T 3k26_A 205 YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD--LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGR 280 (366)
T ss_dssp CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT--EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEE
T ss_pred ecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC--EEEEEecCCEEEEEeCCCccccccccccCCcchheecc
Confidence 0 0000111257899999998 32 44445 456799999875321 1344
Q ss_pred EccCCCccceecccCC--CeEEE-ee-CCeEEEEecCCCCc----cccccCC-----eEEEEe--eCcEEEEEEecCCCC
Q 037368 219 LDNIGCSTNSVAMSDR--LELII-GR-PEAVYFYEVDGRGP----CWAFEGE-----KKLLGW--FRGYLLCVIADQRNS 283 (823)
Q Consensus 219 l~~~~~~~~~~~~s~~--~~liv-~~-~~~I~i~~~~g~~~----~~~~~g~-----~~~i~~--~~~ylv~~s~d~~~~ 283 (823)
+..|...+.+++|+|+ +++++ ++ ++.|++|++..... ...+.++ ...+.| .+.+|++++ .
T Consensus 281 ~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~ 355 (366)
T 3k26_A 281 FDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC-----D 355 (366)
T ss_dssp EECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE-----T
T ss_pred ccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe-----C
Confidence 5567778999999988 87654 44 45899999874322 1234443 445565 467888887 4
Q ss_pred ccEEEEEeCC
Q 037368 284 KNIFNVYDLK 293 (823)
Q Consensus 284 ~~~I~I~D~~ 293 (823)
+++|+|||+.
T Consensus 356 dg~i~iwd~~ 365 (366)
T 3k26_A 356 DASIWRWDRL 365 (366)
T ss_dssp TSEEEEEEC-
T ss_pred CCEEEEEEec
Confidence 5899999985
No 54
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.85 E-value=1.3e-19 Score=198.51 Aligned_cols=226 Identities=10% Similarity=0.038 Sum_probs=164.6
Q ss_pred CeEEEee-C-CCEEEEEecCCeEEEEcCC-------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeE
Q 037368 27 NITCCSS-G-RGKVVIGCDDGAVSLLDRG-------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCL 97 (823)
Q Consensus 27 ~is~~~~-~-~~~l~~gs~dG~i~~~d~~-------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~v 97 (823)
.|.++++ + +..+++|+.||.+++|+.. ......+.+|.+.|.+++|+|++..|+|+|.|++ |
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~---------v 178 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGT---------C 178 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSE---------E
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCc---------E
Confidence 4555554 3 3588999999999999822 1345678899999999999999999999999998 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec--CCCCcceEEEEEeCCeEEEEEcccccccccceeEE
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE--EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ 175 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~--d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~ 175 (823)
++||+... .+++++..+ ..+ |++++++| ++.. +++|+.||+|++|+.. .+.....+
T Consensus 179 ~lwd~~~~----------~~~~~~~~h--~~~---v~~~~~~~~~~g~~---l~sgs~Dg~v~~wd~~----~~~~~~~~ 236 (354)
T 2pbi_B 179 ALWDVESG----------QLLQSFHGH--GAD---VLCLDLAPSETGNT---FVSGGCDKKAMVWDMR----SGQCVQAF 236 (354)
T ss_dssp EEEETTTC----------CEEEEEECC--SSC---EEEEEECCCSSCCE---EEEEETTSCEEEEETT----TCCEEEEE
T ss_pred EEEeCCCC----------eEEEEEcCC--CCC---eEEEEEEeCCCCCE---EEEEeCCCeEEEEECC----CCcEEEEe
Confidence 99999842 366666633 334 99999987 4678 9999999999999863 22223344
Q ss_pred ecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccC--CCccceecccCCCeEEE-ee-CCeEEEEec
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNI--GCSTNSVAMSDRLELII-GR-PEAVYFYEV 250 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~--~~~~~~~~~s~~~~liv-~~-~~~I~i~~~ 250 (823)
..+..+|++++|+|++. .+++++ ++.|++||+.... ....+..+ ...+.+++|+|+|.+++ |+ ++.|++|++
T Consensus 237 ~~h~~~v~~v~~~p~~~--~l~s~s~D~~v~lwd~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 237 ETHESDVNSVRYYPSGD--AFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp CCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTE-EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCCCeEEEEEeCCCC--EEEEEeCCCeEEEEECCCCc-EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 45678999999999984 455554 5679999997542 23334322 33567889999998664 44 458999998
Q ss_pred CCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEe
Q 037368 251 DGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYD 291 (823)
Q Consensus 251 ~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D 291 (823)
........+.+| ...++| .+.+|++++ .|++|+||+
T Consensus 314 ~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs-----~D~~v~vW~ 354 (354)
T 2pbi_B 314 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGS-----WDHTLRVWA 354 (354)
T ss_dssp TTCSEEEEECCCSSCEEEEEECTTSSCEEEEE-----TTSEEEEEC
T ss_pred CCCceEEEEECCCCcEEEEEECCCCCEEEEEc-----CCCCEEecC
Confidence 633333345555 344554 577898888 458999996
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.85 E-value=2.5e-19 Score=191.16 Aligned_cols=242 Identities=13% Similarity=0.164 Sum_probs=167.5
Q ss_pred EeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEE
Q 037368 58 FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFL 137 (823)
Q Consensus 58 ~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va 137 (823)
..+.+|.+.|.+++|+|+|++|||+|.|++ |+|||+... ...+++++..| ..+ |++++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~---------v~iw~~~~~--------~~~~~~~l~gH--~~~---V~~v~ 60 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKT---------IKIFEVEGE--------THKLIDTLTGH--EGP---VWRVD 60 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSC---------EEEEEBCSS--------CBCCCEEECCC--SSC---EEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCE---------EEEEecCCC--------CcEEEEEEccc--cCC---eEEEE
Confidence 367899999999999999999999999998 999999742 12345566533 345 99999
Q ss_pred EecC--CCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeec--CCeEEEEEE-cCCeEEEEEecCC
Q 037368 138 VLEE--APPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVD--GQALQLFAV-TPNSVILFSLQNQ 212 (823)
Q Consensus 138 ~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~d--g~~~~l~~~-t~~~V~~~d~~~~ 212 (823)
|+|+ ++. +|+|+.||+|++|+..- .+......+..+..+|++++|+|+ | ..++++ .++.|++|++...
T Consensus 61 ~s~~~~g~~---l~s~s~D~~v~iWd~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~g--~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 61 WAHPKFGTI---LASCSYDGKVMIWKEEN--GRWSQIAVHAVHSASVNSVQWAPHEYG--PMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ECCGGGCSE---EEEEETTTEEEEEEBSS--SCBCCCEEECCCSSCEEEEEECCGGGC--SEEEEEETTSEEEEEEBCSS
T ss_pred ecCCCcCCE---EEEEcCCCEEEEEEcCC--CceEEEEEeecCCCceeEEEeCcCCCC--cEEEEEECCCcEEEEEecCC
Confidence 9863 788 99999999999998631 000122233446789999999997 5 345555 4567999999754
Q ss_pred CC-cceEEccCCCccceecccCC-------------C-eEEEee-CCeEEEEecCCCCc----cccccCC---eEEEEee
Q 037368 213 PP-KRQFLDNIGCSTNSVAMSDR-------------L-ELIIGR-PEAVYFYEVDGRGP----CWAFEGE---KKLLGWF 269 (823)
Q Consensus 213 ~~-~~~~l~~~~~~~~~~~~s~~-------------~-~liv~~-~~~I~i~~~~g~~~----~~~~~g~---~~~i~~~ 269 (823)
.. ....+..|...+.+++|+|+ + .+++|+ |+.|++|+++.... ...+.+| ...++|.
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s 213 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence 32 24566778888999999986 2 466665 45899999874321 1356666 3566664
Q ss_pred C-----cEEEEEEecCCCCccEEEEEeCCCCE-----EEEe-ccccc-eeEE-EeecCcEEEEEcCCeEEEEeecCh
Q 037368 270 R-----GYLLCVIADQRNSKNIFNVYDLKNRL-----IAHS-LVVKE-VSHM-LCEWGNIILVMTDKSVLCIGEKDM 333 (823)
Q Consensus 270 ~-----~ylv~~s~d~~~~~~~I~I~D~~~~~-----i~~~-~~i~~-v~~v-~~~~~~~~vvs~~~~v~~l~~~~~ 333 (823)
. .++++++ .|++|+|||+.+.. .... ..... +..+ +++++..++.++.+..++++..+.
T Consensus 214 p~~~~~~~las~s-----~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 214 PTVLLRSYMASVS-----QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCSSSEEEEEEE-----TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCceEEEEEE-----CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 3 5777777 46899999987531 1111 11122 4444 677888777766666677775543
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.85 E-value=6e-19 Score=196.34 Aligned_cols=266 Identities=11% Similarity=0.062 Sum_probs=184.2
Q ss_pred CCeEEEeeCC--C-EEEEEecCCeEEEEcC----C-Ce------eeEeEee----------cccceeEEEEecCCCEEEE
Q 037368 26 GNITCCSSGR--G-KVVIGCDDGAVSLLDR----G-LK------FNFGFQA----------HSSSVLFLQQLKQRNFLVT 81 (823)
Q Consensus 26 ~~is~~~~~~--~-~l~~gs~dG~i~~~d~----~-~~------~~~~~~~----------H~~~V~~i~~~~~~~~l~s 81 (823)
..|+|+++++ . +|++|+.||.|++|+. . ++ ....+.. |.+.|++++|+|++++|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 5687887654 4 8999999999999985 3 44 3444544 6889999999999999999
Q ss_pred EecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEE
Q 037368 82 VGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIK 161 (823)
Q Consensus 82 ~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~ 161 (823)
++.|++ |++||... .++..+..+ ..+ |++++|+|+++. +++|+.||.|++|+
T Consensus 126 ~~~dg~---------i~i~~~~~-----------~~~~~~~~~--~~~---v~~~~~~~~~~~---l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 126 GVENGE---------LRLWNKTG-----------ALLNVLNFH--RAP---IVSVKWNKDGTH---IISMDVENVTILWN 177 (425)
T ss_dssp EETTSC---------EEEEETTS-----------CEEEEECCC--CSC---EEEEEECTTSSE---EEEEETTCCEEEEE
T ss_pred EeCCCe---------EEEEeCCC-----------CeeeeccCC--Ccc---EEEEEECCCCCE---EEEEecCCeEEEEE
Confidence 999998 99999431 245555422 334 999999999999 99999999999998
Q ss_pred cccccccccceeEEecCCCC---------------cceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCcc
Q 037368 162 GDIARERITRFKLQVDNQCS---------------VMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCST 226 (823)
Q Consensus 162 ~~~~~~~~~k~~~~~~~~~~---------------It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~ 226 (823)
.. .+.....+..+..+ |+++.|++++ .+++.+.++.|++|++... .+...+..|...+
T Consensus 178 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~-~~~~~~~~~~~~i 250 (425)
T 1r5m_A 178 VI----SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEK-TPTGKLIGHHGPI 250 (425)
T ss_dssp TT----TTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCS-SCSEEECCCSSCE
T ss_pred CC----CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCC-ceeeeeccCCCce
Confidence 63 11112222222333 9999999987 4555555667999999764 3556677788889
Q ss_pred ceecccCCCeEE-Eee-CCeEEEEecCCCCccccccCC---eEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCEEEEe
Q 037368 227 NSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFEGE---KKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLIAHS 300 (823)
Q Consensus 227 ~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~g~---~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i~~~ 300 (823)
.+++|+|++.++ +++ ++.|++|++........+.++ ...+.|..+ ++++++ .+++|++||+.+......
T Consensus 251 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-----~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCS-----MDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEE-----TTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEe-----CCCcEEEEECCCCcEeEe
Confidence 999999988644 454 468999998744333344443 456666543 666666 468999999987665433
Q ss_pred c--cccceeEE-EeecCcEEEEEcCCeEEEEeec
Q 037368 301 L--VVKEVSHM-LCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 301 ~--~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
. +-..+..+ +++.+.+++++..+..++++..
T Consensus 326 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 326 SIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EECTTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred cccCCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 2 22235444 6777777777665545555543
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.85 E-value=2.7e-19 Score=199.78 Aligned_cols=259 Identities=8% Similarity=0.035 Sum_probs=179.3
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
.+.+|++|+.||.|++|| .+++....+.+| ..+....++|++++|++++.|++ |+|||+...
T Consensus 67 ~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~---------i~iwd~~~~------- 129 (420)
T 3vl1_A 67 VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGD---------IKVLDSNFN------- 129 (420)
T ss_dssp EETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSC---------EEEECTTSC-------
T ss_pred cCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCC---------EEEEeCCCc-------
Confidence 456899999999999999 556666566666 34555577899999999999998 999998742
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCC
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQ 192 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~ 192 (823)
.+.+.+. .+..+ |++++|+|++.. +|+|+.||+|++|+.. .+.....+..+.++|++++|+|+++
T Consensus 130 ---~~~~~~~--~h~~~---v~~~~~~~~~~~---l~s~s~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~ 194 (420)
T 3vl1_A 130 ---LQREIDQ--AHVSE---ITKLKFFPSGEA---LISSSQDMQLKIWSVK----DGSNPRTLIGHRATVTDIAIIDRGR 194 (420)
T ss_dssp ---EEEEETT--SSSSC---EEEEEECTTSSE---EEEEETTSEEEEEETT----TCCCCEEEECCSSCEEEEEEETTTT
T ss_pred ---ceeeecc--cccCc---cEEEEECCCCCE---EEEEeCCCeEEEEeCC----CCcCceEEcCCCCcEEEEEEcCCCC
Confidence 2333322 22334 999999999999 9999999999999863 2333444556788999999999984
Q ss_pred eEEEEEEc-CCeEEEEEecCCCCcceEEcc------------------------CCCccceecccCCCeEEE-ee-CCeE
Q 037368 193 ALQLFAVT-PNSVILFSLQNQPPKRQFLDN------------------------IGCSTNSVAMSDRLELII-GR-PEAV 245 (823)
Q Consensus 193 ~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~------------------------~~~~~~~~~~s~~~~liv-~~-~~~I 245 (823)
.+++++ ++.|++||+.... ....+.. +...+.+++|+|++.+++ +. ++.|
T Consensus 195 --~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 271 (420)
T 3vl1_A 195 --NVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVI 271 (420)
T ss_dssp --EEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCE
T ss_pred --EEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeE
Confidence 455554 5669999987542 3333332 124566778899997654 44 4589
Q ss_pred EEEecCCCCccccc----cCCeEEEEee--Cc-EEEEEEecCCCCccEEEEEeCCCC-E--EEEec-cccceeEEEeecC
Q 037368 246 YFYEVDGRGPCWAF----EGEKKLLGWF--RG-YLLCVIADQRNSKNIFNVYDLKNR-L--IAHSL-VVKEVSHMLCEWG 314 (823)
Q Consensus 246 ~i~~~~g~~~~~~~----~g~~~~i~~~--~~-ylv~~s~d~~~~~~~I~I~D~~~~-~--i~~~~-~i~~v~~v~~~~~ 314 (823)
++|++........+ .+....+.|. +. ++++++ .+++|++||+.+. . ..+.. +-..+..++...+
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 346 (420)
T 3vl1_A 272 TVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY-----ENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAG 346 (420)
T ss_dssp EEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE-----TTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETT
T ss_pred EEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe-----CCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCC
Confidence 99998754333322 2234566665 44 777777 4589999999763 2 22332 2223555666677
Q ss_pred cEEEEEcCCeEEEEeecC
Q 037368 315 NIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 315 ~~~vvs~~~~v~~l~~~~ 332 (823)
.+++.++.+..++++...
T Consensus 347 ~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 347 ALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEEEEETTTEEEEEEEEC
T ss_pred CEEEEecCCccEEEEecc
Confidence 777777766677776543
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=1.2e-18 Score=196.66 Aligned_cols=258 Identities=15% Similarity=0.204 Sum_probs=186.2
Q ss_pred eEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCC
Q 037368 28 ITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKME 106 (823)
Q Consensus 28 is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~ 106 (823)
++|+.+.++.+++|+.||+|++|| .+++.++++.+|.+.|.++.++ +++|+|+|.|++ |++||+...
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~---------i~vwd~~~~- 189 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT---------LKVWNAETG- 189 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSC---------EEEEETTTT-
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe---------EEEEECCcC-
Confidence 588888889999999999999999 7889999999999999999996 679999999998 999999842
Q ss_pred CCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEE
Q 037368 107 PEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLG 186 (823)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~ 186 (823)
.++.++..+ ..+ |+++++++ .. +++|+.||+|++|+.. .+.....+..+..+|++++
T Consensus 190 ---------~~~~~~~~h--~~~---v~~~~~~~--~~---l~s~s~dg~i~~wd~~----~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 190 ---------ECIHTLYGH--TST---VRCMHLHE--KR---VVSGSRDATLRVWDIE----TGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp ---------EEEEEECCC--SSC---EEEEEEET--TE---EEEEETTSEEEEEESS----SCCEEEEEECCSSCEEEEE
T ss_pred ---------cEEEEECCC--CCc---EEEEEecC--CE---EEEEeCCCEEEEEECC----CCcEEEEEcCCcccEEEEE
Confidence 356565533 334 99999975 47 9999999999999863 2222334455688999999
Q ss_pred EeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCccccccCC---
Q 037368 187 FRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGPCWAFEGE--- 262 (823)
Q Consensus 187 fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~~~~~~g~--- 262 (823)
| +|+ .++..+.++.|++||+... .+...+..|...+.++.+ .+..+++++ ++.|++|++........+.++
T Consensus 247 ~--~~~-~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 321 (445)
T 2ovr_B 247 Y--DGR-RVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 321 (445)
T ss_dssp E--CSS-CEEEEETTSCEEEEEGGGT-EEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC
T ss_pred E--CCC-EEEEEcCCCEEEEEECCCC-cEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc
Confidence 8 442 3444445667999998754 355667777788888888 334455554 568999998744333445554
Q ss_pred eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEec-----cccceeEEEeecCcEEEEEcCCeEEEEeec
Q 037368 263 KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL-----VVKEVSHMLCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 263 ~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~-----~i~~v~~v~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
...+.+.++++++++. +++|++||+.++...... +...+..+. ..+..++.++.+..++++..
T Consensus 322 v~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 322 TSGMELKDNILVSGNA-----DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ-FNKNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEEEEEETTEEEEEET-----TSCEEEEETTTCCEEEEECSTTSCSSCEEEEE-ECSSEEEEEETTSEEEEEET
T ss_pred EEEEEEeCCEEEEEeC-----CCeEEEEECCCCcEEEEEccCCCCCCCEEEEE-ECCCEEEEEeCCCeEEEEEC
Confidence 4567888899988874 589999999765433322 222244432 23556666555555666543
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.6e-19 Score=197.86 Aligned_cols=235 Identities=10% Similarity=0.076 Sum_probs=170.9
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-C--CCeeeEeEeecccceeEEEEecC--CCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-R--GLKFNFGFQAHSSSVLFLQQLKQ--RNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~--~~~~~~~~~~H~~~V~~i~~~~~--~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|++++ +.+|++|+.||.|++|+ . +++.++.+.+|.+.|++++|+++ +++|+|++.|++ |+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~---------v~ 82 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK---------VL 82 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC---------EE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE---------EE
Confidence 358888765 35899999999999999 4 56777889999999999999877 899999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
|||+... ...++..+. .+..+ |++++|+|+ +.. +++|+.||.|++|+..- ........+.
T Consensus 83 iwd~~~~--------~~~~~~~~~--~~~~~---v~~~~~~~~~~~~~---l~~~~~d~~i~v~d~~~--~~~~~~~~~~ 144 (379)
T 3jrp_A 83 IWKEENG--------RWSQIAVHA--VHSAS---VNSVQWAPHEYGPL---LLVASSDGKVSVVEFKE--NGTTSPIIID 144 (379)
T ss_dssp EEEEETT--------EEEEEEEEC--CCSSC---EEEEEECCGGGCSE---EEEEETTSEEEEEECCT--TSCCCEEEEE
T ss_pred EEEcCCC--------ceeEeeeec--CCCcc---eEEEEeCCCCCCCE---EEEecCCCcEEEEecCC--CCceeeEEec
Confidence 9999842 111333333 22334 999999999 889 99999999999998641 1112222344
Q ss_pred cCCCCcceEEEee-------------cCCeEEEEEE-cCCeEEEEEecCCCC---cceEEccCCCccceecccCC---Ce
Q 037368 177 DNQCSVMGLGFRV-------------DGQALQLFAV-TPNSVILFSLQNQPP---KRQFLDNIGCSTNSVAMSDR---LE 236 (823)
Q Consensus 177 ~~~~~It~l~fs~-------------dg~~~~l~~~-t~~~V~~~d~~~~~~---~~~~l~~~~~~~~~~~~s~~---~~ 236 (823)
.+..+|++++|+| ++ ..++++ .++.|++||+..... ....+..|...+.+++|+|+ +.
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTT--CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred CCCCceEEEEEcCccccccccccCCCCC--CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC
Confidence 5688999999999 45 345444 456799999975432 33456678888999999998 76
Q ss_pred EE-Eee-CCeEEEEecCCCCc-----ccc---ccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 237 LI-IGR-PEAVYFYEVDGRGP-----CWA---FEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 237 li-v~~-~~~I~i~~~~g~~~-----~~~---~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
++ +++ ++.|++|+++.... ... ..+....+.| .+.++++++. +++|+|||+..
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-----dg~i~iw~~~~ 287 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-----DNKVTLWKENL 287 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-----SSSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-----CCcEEEEeCCC
Confidence 55 444 46899999874321 111 2223445555 5678888774 58999999863
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.85 E-value=3.9e-20 Score=203.62 Aligned_cols=233 Identities=13% Similarity=0.024 Sum_probs=159.3
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCC--eeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGL--KFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~--~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
..|+|++++ +.+|++|+.||.|++|| .++ +.+.++.+|.+.|++++|+|++++|+|+|.|++ |+||
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~---------v~vw 82 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRN---------AYVY 82 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSS---------EEEC
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCe---------EEEE
Confidence 457666664 45889999999999999 555 678889999999999999999999999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccc-cceeEEec-C
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI-TRFKLQVD-N 178 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~-~k~~~~~~-~ 178 (823)
|+.... ...+...+. .+..+ |++++|+|+++. +|+|+.||.|++|+..- ... .....+.. +
T Consensus 83 d~~~~~-------~~~~~~~~~--~~~~~---v~~~~~~~~~~~---l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~h 145 (377)
T 3dwl_C 83 EKRPDG-------TWKQTLVLL--RLNRA---ATFVRWSPNEDK---FAVGSGARVISVCYFEQ--ENDWWVSKHLKRPL 145 (377)
T ss_dssp -------------CCCCEEECC--CCSSC---EEEEECCTTSSC---CEEEESSSCEEECCC-------CCCCEEECSSC
T ss_pred EcCCCC-------ceeeeeEec--ccCCc---eEEEEECCCCCE---EEEEecCCeEEEEEECC--cccceeeeEeeccc
Confidence 998531 011222222 22334 999999999999 99999999999998641 000 01334444 6
Q ss_pred CCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCC-----------------CcceEEccCCCccceecccCCCeEE-E
Q 037368 179 QCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQP-----------------PKRQFLDNIGCSTNSVAMSDRLELI-I 239 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~-----------------~~~~~l~~~~~~~~~~~~s~~~~li-v 239 (823)
.++|++++|+|+++ .++++ .++.|++||+.... .+...+ .|...+.+++|+|+++++ +
T Consensus 146 ~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~ 222 (377)
T 3dwl_C 146 RSTILSLDWHPNNV--LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY 222 (377)
T ss_dssp CSCEEEEEECTTSS--EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE
T ss_pred CCCeEEEEEcCCCC--EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE
Confidence 88999999999984 45555 45679999985321 122223 677789999999999754 4
Q ss_pred ee-CCeEEEEecCCCCc----cccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 240 GR-PEAVYFYEVDGRGP----CWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 240 ~~-~~~I~i~~~~g~~~----~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
++ ++.|++|++..... ...+.++ ...+.| .+.++++++. ++.+ +|+..
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----~~~~-~~~~~ 280 (377)
T 3dwl_C 223 AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN-----YSPI-LLQGN 280 (377)
T ss_dssp EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS-----SSEE-EECCC
T ss_pred EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC-----CcEE-EEEeC
Confidence 54 46999999875433 2345554 344444 5667766542 3444 67654
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=1.3e-18 Score=192.68 Aligned_cols=275 Identities=11% Similarity=0.074 Sum_probs=185.2
Q ss_pred CCCeEEEeeCC---CEEEEEecCCeEEEEc-CCCeeeEeEe-------------ecccceeEEEEec-CCCEEEEEecCC
Q 037368 25 SGNITCCSSGR---GKVVIGCDDGAVSLLD-RGLKFNFGFQ-------------AHSSSVLFLQQLK-QRNFLVTVGEDE 86 (823)
Q Consensus 25 ~~~is~~~~~~---~~l~~gs~dG~i~~~d-~~~~~~~~~~-------------~H~~~V~~i~~~~-~~~~l~s~s~D~ 86 (823)
...|+|+++++ .+|++|+.||.|++|| .+++....+. +|.+.|.+++|+| ++++|+|++.|+
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 34688888754 6899999999999999 5555444443 5999999999999 788999999999
Q ss_pred CCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC---CcceEEEEEeCCeEEEEEcc
Q 037368 87 QVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP---PILLIAIGLDNGCIYCIKGD 163 (823)
Q Consensus 87 ~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~---~~~~ia~G~~dG~V~l~~~~ 163 (823)
+ |++||+... .++..+.. ..+ +.+++++|.+. . +++|+.+|.|.+|+..
T Consensus 123 ~---------i~iwd~~~~----------~~~~~~~~---~~~---~~~~~~~~~~~~~~~---~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 123 T---------LKVWDTNTL----------QTADVFNF---EET---VYSHHMSPVSTKHCL---VAVGTRGPKVQLCDLK 174 (408)
T ss_dssp E---------EEEEETTTT----------EEEEEEEC---SSC---EEEEEECSSCSSCCE---EEEEESSSSEEEEESS
T ss_pred e---------EEEeeCCCC----------ccceeccC---CCc---eeeeEeecCCCCCcE---EEEEcCCCeEEEEeCC
Confidence 8 999999842 24444431 233 89999998554 7 9999999999999863
Q ss_pred cccccccceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEE---------------ccCCCccc
Q 037368 164 IARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFL---------------DNIGCSTN 227 (823)
Q Consensus 164 ~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l---------------~~~~~~~~ 227 (823)
.+.....+..+.++|++++|+|++. .++++++ ++.|++||+.....+...+ ..|...+.
T Consensus 175 ----~~~~~~~~~~~~~~v~~~~~~~~~~-~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 249 (408)
T 4a11_B 175 ----SGSCSHILQGHRQEILAVSWSPRYD-YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN 249 (408)
T ss_dssp ----SSCCCEEECCCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred ----CcceeeeecCCCCcEEEEEECCCCC-cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence 2223334445688999999999985 3455554 5679999997543233332 35667788
Q ss_pred eecccCCCeEE-Eee-CCeEEEEecCCCCccccccCC---------eEEEEe-eCcEEEEEEecCCCCccEEEEEeCCCC
Q 037368 228 SVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFEGE---------KKLLGW-FRGYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 228 ~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~g~---------~~~i~~-~~~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
+++|+|++.++ +++ ++.|++|++........+.++ .....+ .+..++.++. ++.|++||+.+.
T Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~v~d~~~~ 324 (408)
T 4a11_B 250 GLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY-----GSTIAVYTVYSG 324 (408)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE-----TTEEEEEETTTC
T ss_pred EEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec-----CCEEEEEECcCC
Confidence 99999998754 454 468999998743222111111 111222 2345555543 589999999875
Q ss_pred EEEE--eccccceeEE-EeecCcEEEEEcCCeEEEEeecChHHHH
Q 037368 296 LIAH--SLVVKEVSHM-LCEWGNIILVMTDKSVLCIGEKDMESKL 337 (823)
Q Consensus 296 ~i~~--~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~~~~~i 337 (823)
.... ..+-..+..+ +++++.+++.++.+..++++..+..+.+
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 5433 2333335554 6777777777665556677766555443
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=1.6e-18 Score=194.44 Aligned_cols=265 Identities=12% Similarity=0.072 Sum_probs=184.8
Q ss_pred EEEee-CCCEEEEEecCCeEEEEc-CCCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 29 TCCSS-GRGKVVIGCDDGAVSLLD-RGLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 29 s~~~~-~~~~l~~gs~dG~i~~~d-~~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
+++.- +.+.|++|. |++|++|| .+|++++.++ +|...|++|+|+|+|++||||+.|++ |+|||+..
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~---------v~iWd~~~ 178 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE---------VQLWDVQQ 178 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC---------EEEEETTT
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe---------EEEEEcCC
Confidence 45553 346777775 99999999 7788877776 56788999999999999999999998 99999984
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcce
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
. .+++++..+ ..+ +.++++++ .. +++|+.||.+.+|+... .......+..+...|++
T Consensus 179 ~----------~~~~~~~~h--~~~---v~~~s~~~--~~---l~sgs~d~~i~~~d~~~---~~~~~~~~~~h~~~~~~ 235 (420)
T 4gga_A 179 Q----------KRLRNMTSH--SAR---VGSLSWNS--YI---LSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCG 235 (420)
T ss_dssp T----------EEEEEECCC--SSC---EEEEEEET--TE---EEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEE
T ss_pred C----------cEEEEEeCC--CCc---eEEEeeCC--CE---EEEEeCCCceeEeeecc---cceeeEEecccccceee
Confidence 2 356665533 223 88877764 57 99999999999998632 12223334556789999
Q ss_pred EEEeecCCeEEEEEEcCCeEEEEEecCCC---CcceEEccCCCccceecccCCCe-E-EEee---CCeEEEEecCCCCcc
Q 037368 185 LGFRVDGQALQLFAVTPNSVILFSLQNQP---PKRQFLDNIGCSTNSVAMSDRLE-L-IIGR---PEAVYFYEVDGRGPC 256 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~~~V~~~d~~~~~---~~~~~l~~~~~~~~~~~~s~~~~-l-iv~~---~~~I~i~~~~g~~~~ 256 (823)
+.|+++|+ .++..+.++.|.+|+..... ........+...+.+++|+|.+. + ++++ |++|++|++......
T Consensus 236 ~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 236 LRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 99999985 34444456679999986533 23445556777888999998553 3 3432 468999998743222
Q ss_pred ccccCC--eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE--EeccccceeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 257 WAFEGE--KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA--HSLVVKEVSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 257 ~~~~g~--~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~--~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
..+..+ ...+.| .+.++++++.. .+++|+|||+.+.... +..+-..|..+ ++++|.+++.++.+..+++|
T Consensus 315 ~~~~~~~~v~~~~~~~~~~~lv~~sg~---~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 315 SAVDAHSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred eeeccccceeeeeecCCCCeEEEEEec---CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 233332 333333 56788877643 4689999999765433 34444446665 77888877777666677777
Q ss_pred e
Q 037368 330 E 330 (823)
Q Consensus 330 ~ 330 (823)
.
T Consensus 392 d 392 (420)
T 4gga_A 392 R 392 (420)
T ss_dssp C
T ss_pred E
Confidence 4
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.84 E-value=3.9e-19 Score=191.50 Aligned_cols=207 Identities=11% Similarity=0.084 Sum_probs=143.2
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCC----eeeEeEeecccceeEEEEec--CCCEEEEEecCCCCccccccee
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGL----KFNFGFQAHSSSVLFLQQLK--QRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~----~~~~~~~~H~~~V~~i~~~~--~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
..|+|+++++ .+|++|+.||.|++|| .++ +....+.+|.+.|++++|+| ++++|+|+|.|++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~--------- 82 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT--------- 82 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC---------
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe---------
Confidence 3588888753 5899999999999999 443 46778899999999999999 5999999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccc-cc--
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERI-TR-- 171 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~-~k-- 171 (823)
|+|||+........ .....++..+. .+..+ |++++|+|+ +.. +++|+.||.|++|+..-..... ..
T Consensus 83 v~vwd~~~~~~~~~-~~~~~~~~~~~--~~~~~---v~~~~~~~~~~~~~---l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 83 VKLWEEDPDQEECS-GRRWNKLCTLN--DSKGS---LYSVKFAPAHLGLK---LACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEEECTTSCTTS-SCSEEEEEEEC--CCSSC---EEEEEECCGGGCSE---EEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEecCCCccccc-ccCcceeeeec--ccCCc---eeEEEEcCCCCCcE---EEEecCCCcEEEecCCChHHhcccccc
Confidence 99999985421000 00012333433 22334 999999999 999 9999999999999853100000 00
Q ss_pred --eeEE----ecCCCCcceEEEeec---CCeEEEEEEcCCe-EEEEEecCCC-CcceEEccCCCccceecccCCC----e
Q 037368 172 --FKLQ----VDNQCSVMGLGFRVD---GQALQLFAVTPNS-VILFSLQNQP-PKRQFLDNIGCSTNSVAMSDRL----E 236 (823)
Q Consensus 172 --~~~~----~~~~~~It~l~fs~d---g~~~~l~~~t~~~-V~~~d~~~~~-~~~~~l~~~~~~~~~~~~s~~~----~ 236 (823)
.... ..+...|+++.|+|+ + ..+++++.++ +..|+..... .....+..|...+.+++|+|++ .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWCPSRFSP--EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEECCCSSSC--CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred ccccccccccCCcccceeEEEeccCCCCC--cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 0000 023578999999997 5 4566666555 5444443321 1244456788889999999987 5
Q ss_pred -EEEee-CCeEEEEecCC
Q 037368 237 -LIIGR-PEAVYFYEVDG 252 (823)
Q Consensus 237 -liv~~-~~~I~i~~~~g 252 (823)
+++++ ++.|++|++..
T Consensus 232 ~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEEEETTSCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEeCCC
Confidence 45555 45899999763
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.84 E-value=9.1e-19 Score=188.50 Aligned_cols=227 Identities=11% Similarity=0.090 Sum_probs=169.4
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCe--eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEE
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
...|+|++..+ ..+++|+.||.|++|| .+++ ....+.+|...|.+++++|++++|++++.|++ |++
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---------v~~ 167 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN---------IAV 167 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC---------EEE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCc---------EEE
Confidence 34587777653 5799999999999999 5554 56678899999999999999999999999998 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCC
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
||+... .++..+..+ ..+ |++++|+|++.. +++|+.||.|++|+.. ..+........
T Consensus 168 ~d~~~~----------~~~~~~~~~--~~~---i~~~~~~~~~~~---l~~~~~dg~i~~~d~~-----~~~~~~~~~~~ 224 (337)
T 1gxr_A 168 WDLHNQ----------TLVRQFQGH--TDG---ASCIDISNDGTK---LWTGGLDNTVRSWDLR-----EGRQLQQHDFT 224 (337)
T ss_dssp EETTTT----------EEEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSEEEEEETT-----TTEEEEEEECS
T ss_pred EeCCCC----------ceeeeeecc--cCc---eEEEEECCCCCE---EEEEecCCcEEEEECC-----CCceEeeecCC
Confidence 999842 245554422 233 999999999999 9999999999999863 12222234567
Q ss_pred CCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcc
Q 037368 180 CSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPC 256 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~ 256 (823)
++|++++|+|+++ .+++++ ++.|++|++.... ...+..|...+.+++|+|+++++ +++ ++.|++|+.......
T Consensus 225 ~~v~~~~~s~~~~--~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 225 SQIFSLGYCPTGE--WLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEEECTTSS--EEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCC--EEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 8899999999984 455554 5679999997642 34456677889999999988755 444 468999998744332
Q ss_pred cc--ccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeC
Q 037368 257 WA--FEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 257 ~~--~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
.. ..+....+.| .+.++++++ .+++|++||+
T Consensus 301 ~~~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~iw~~ 335 (337)
T 1gxr_A 301 FQSKESSSVLSCDISVDDKYIVTGS-----GDKKATVYEV 335 (337)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEE-----TTSCEEEEEE
T ss_pred EEecCCCcEEEEEECCCCCEEEEec-----CCCeEEEEEE
Confidence 22 2233445555 467888777 4589999986
No 65
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.4e-19 Score=201.52 Aligned_cols=276 Identities=9% Similarity=0.080 Sum_probs=185.5
Q ss_pred CCeEEEeeCC--C-EEEEE----------ecCCeEEEEc-CCCe---eeEeEeecccceeEEEEecCCCEEEEEecCCCC
Q 037368 26 GNITCCSSGR--G-KVVIG----------CDDGAVSLLD-RGLK---FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQV 88 (823)
Q Consensus 26 ~~is~~~~~~--~-~l~~g----------s~dG~i~~~d-~~~~---~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~ 88 (823)
+.|+|++.++ . .+++| +.||.|++|| .+++ .+..+ .|...|++++|+|++++|++++.|++
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~- 90 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGS- 90 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSC-
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCe-
Confidence 3566666543 2 78888 8899999999 4443 34334 58899999999999999999999998
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC-CCCcceEEEEEeCCeEEEEEcccccc
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE-APPILLIAIGLDNGCIYCIKGDIARE 167 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d-~~~~~~ia~G~~dG~V~l~~~~~~~~ 167 (823)
|++||+..... ...++..+..+ ..+ |++++|+|+ +.. +++|+.||.|++|+..-...
T Consensus 91 --------v~vw~~~~~~~------~~~~~~~~~~h--~~~---v~~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~ 148 (416)
T 2pm9_A 91 --------LELYSTNEANN------AINSMARFSNH--SSS---VKTVKFNAKQDNV---LASGGNNGEIFIWDMNKCTE 148 (416)
T ss_dssp --------EEEECCSSTTS------CCCEEEECCCS--SSC---CCEEEECSSSTTB---EEEECSSSCEEBCBTTTTSS
T ss_pred --------EEEeecccccc------cccchhhccCC--ccc---eEEEEEcCCCCCE---EEEEcCCCeEEEEECCCCcc
Confidence 99999985210 11244444322 334 999999998 888 99999999999998641100
Q ss_pred ccc--ceeE---EecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccC------CCccceecccCCC
Q 037368 168 RIT--RFKL---QVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNI------GCSTNSVAMSDRL 235 (823)
Q Consensus 168 ~~~--k~~~---~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~------~~~~~~~~~s~~~ 235 (823)
... .... ...+.++|++++|++++. ..+++++ ++.|++||+.... ....+..+ ...+.+++|+|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 149 SPSNYTPLTPGQSMSSVDEVISLAWNQSLA-HVFASAGSSNFASIWDLKAKK-EVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp CTTTCCCBCCCCSCCSSCCCCEEEECSSCT-TEEEEESSSSCEEEEETTTTE-EEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred ccccccccccccccCCCCCeeEEEeCCCCC-cEEEEEcCCCCEEEEECCCCC-cceEEeccccccccCCceEEEEECCCC
Confidence 000 1111 124578999999999843 3555555 4569999997643 44445443 6778899999987
Q ss_pred --eEEEeeCC----eEEEEecCCC-Ccccccc-CC---eEEEEe---eCcEEEEEEecCCCCccEEEEEeCCCCEEEE--
Q 037368 236 --ELIIGRPE----AVYFYEVDGR-GPCWAFE-GE---KKLLGW---FRGYLLCVIADQRNSKNIFNVYDLKNRLIAH-- 299 (823)
Q Consensus 236 --~liv~~~~----~I~i~~~~g~-~~~~~~~-g~---~~~i~~---~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~-- 299 (823)
.++++..+ .|++|+++.. .+...+. +| ...+.| .+.++++++ .+++|++||+.++....
T Consensus 227 ~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-----~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 227 STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG-----RDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE-----SSSEEEEECSSSCCEEEEE
T ss_pred CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe-----CCCCEEEeeCCCCccceee
Confidence 35556554 8999998753 2333444 44 456666 456888777 45899999998754332
Q ss_pred eccccceeEE-EeecC-cEEEEEcCCeEEEEeecC
Q 037368 300 SLVVKEVSHM-LCEWG-NIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 300 ~~~i~~v~~v-~~~~~-~~~vvs~~~~v~~l~~~~ 332 (823)
..+-..+..+ +++.+ .+++.++.+..++++...
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 2232334444 67777 577776655566666543
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.84 E-value=9.2e-19 Score=223.47 Aligned_cols=267 Identities=12% Similarity=0.158 Sum_probs=193.4
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .++++|+.||+|++|| .+++.+.++++|.+.|++++|+|+|++|+|+|.|++ |+|||+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~---------v~vwd~ 686 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKK---------VKIWDS 686 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSE---------EEEEET
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCe---------EEEEEC
Confidence 4588888753 5899999999999999 788888999999999999999999999999999998 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQC 180 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~ 180 (823)
.+. .+++++..+ ..+ |++++|+|+ +.. +++|+.||.|++|+.. .+.....+..+.+
T Consensus 687 ~~~----------~~~~~~~~~--~~~---v~~~~~~~~~~~~~---l~sg~~d~~v~vwd~~----~~~~~~~~~~h~~ 744 (1249)
T 3sfz_A 687 ATG----------KLVHTYDEH--SEQ---VNCCHFTNKSNHLL---LATGSNDFFLKLWDLN----QKECRNTMFGHTN 744 (1249)
T ss_dssp TTC----------CEEEEEECC--SSC---EEEEEECSSSSCCE---EEEEETTSCEEEEETT----SSSEEEEECCCSS
T ss_pred CCC----------ceEEEEcCC--CCc---EEEEEEecCCCceE---EEEEeCCCeEEEEECC----CcchhheecCCCC
Confidence 842 366666633 334 999999995 446 9999999999999863 2233344556788
Q ss_pred CcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc-------------cCCCccceecccCCCeEE-EeeCCeEE
Q 037368 181 SVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD-------------NIGCSTNSVAMSDRLELI-IGRPEAVY 246 (823)
Q Consensus 181 ~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~-------------~~~~~~~~~~~s~~~~li-v~~~~~I~ 246 (823)
+|++++|+|+|+ .++.++.++.|++||+.... ....+. .....+.|++|+|+|..+ ++.++.+.
T Consensus 745 ~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~ 822 (1249)
T 3sfz_A 745 SVNHCRFSPDDE-LLASCSADGTLRLWDVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL 822 (1249)
T ss_dssp CEEEEEECSSTT-EEEEEESSSEEEEEEGGGTE-EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEE
T ss_pred CEEEEEEecCCC-EEEEEECCCeEEEEeCCCCc-ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEE
Confidence 999999999985 33444455679999987542 111111 123357789999999855 56678999
Q ss_pred EEecCCCCcccccc-CC---eEE--EEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEE--eccccceeEE-EeecCcEE
Q 037368 247 FYEVDGRGPCWAFE-GE---KKL--LGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAH--SLVVKEVSHM-LCEWGNII 317 (823)
Q Consensus 247 i~~~~g~~~~~~~~-g~---~~~--i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~--~~~i~~v~~v-~~~~~~~~ 317 (823)
+|+.........+. ++ ... +.+.+.++++++ .+++|++||+.++.... ..+...+..+ +++++..+
T Consensus 823 ~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-----~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l 897 (1249)
T 3sfz_A 823 LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL-----SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSF 897 (1249)
T ss_dssp EEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEEC-----SSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEE
Confidence 99987543322221 22 233 344577888776 45899999998876543 3333345555 67777777
Q ss_pred EEEcCCeEEEEee
Q 037368 318 LVMTDKSVLCIGE 330 (823)
Q Consensus 318 vvs~~~~v~~l~~ 330 (823)
+.++.+..++++.
T Consensus 898 ~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 898 LTASDDQTIRVWE 910 (1249)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEeCCCeEEEEE
Confidence 7766666666764
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=2.9e-18 Score=194.53 Aligned_cols=271 Identities=14% Similarity=0.199 Sum_probs=183.8
Q ss_pred CCeEEEeeC-CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEe--cCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 26 GNITCCSSG-RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQL--KQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 26 ~~is~~~~~-~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~--~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
..|+|++.. ++.+++|+.||+|++|| .+++.+..+.+|.+.|.+++++ +++++|+|++.|++ |++||
T Consensus 163 ~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~---------i~vwd 233 (464)
T 3v7d_B 163 GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT---------LHVWK 233 (464)
T ss_dssp SCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC---------EEEEE
T ss_pred cCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc---------EEEee
Confidence 458888765 56999999999999999 7888999999999999999998 57799999999998 99999
Q ss_pred CCCCCCCCC-------------CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccc
Q 037368 102 LDKMEPEGT-------------SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARER 168 (823)
Q Consensus 102 l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~ 168 (823)
+........ ....+.++..+..+ ..+ |.++ ++++.. +++|+.||.|++|+.. .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---v~~~--~~~~~~---l~~~~~d~~i~vwd~~----~ 299 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH--MAS---VRTV--SGHGNI---VVSGSYDNTLIVWDVA----Q 299 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCC--SSC---EEEE--EEETTE---EEEEETTSCEEEEETT----T
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCc--cce---EEEE--cCCCCE---EEEEeCCCeEEEEECC----C
Confidence 986431000 00011123333211 222 6665 677788 9999999999999863 1
Q ss_pred ccceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEE
Q 037368 169 ITRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVY 246 (823)
Q Consensus 169 ~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~ 246 (823)
+.....+..+.++|+++.|+++++ .++++ .++.|++||+... .+...+..|...+.++.+++ ..+++++ ++.|+
T Consensus 300 ~~~~~~~~~~~~~v~~~~~~~~~~--~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 300 MKCLYILSGHTDRIYSTIYDHERK--RCISASMDTTIRIWDLENG-ELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIR 375 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECS-SEEEEEETTSEEE
T ss_pred CcEEEEecCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCC-cEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEE
Confidence 222333445678999999999985 45555 4567999999753 35667778888899998874 5566655 56899
Q ss_pred EEecCCCCccccccC----CeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEec---cccceeEEEeecCcEEEE
Q 037368 247 FYEVDGRGPCWAFEG----EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL---VVKEVSHMLCEWGNIILV 319 (823)
Q Consensus 247 i~~~~g~~~~~~~~g----~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~---~i~~v~~v~~~~~~~~vv 319 (823)
+|++........... ....+.+.+.++++++ +++|+|||+.++...... +...+..+....+.+++.
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~ 449 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS------ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAA 449 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE------TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCCCEEEEec------CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEE
Confidence 999975433222211 1235566777887765 379999999887665532 222255543233334444
Q ss_pred EcCCeEEEEe
Q 037368 320 MTDKSVLCIG 329 (823)
Q Consensus 320 s~~~~v~~l~ 329 (823)
+.++....++
T Consensus 450 ~~~~g~~~i~ 459 (464)
T 3v7d_B 450 VEKDGQSFLE 459 (464)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCeEEEE
Confidence 4444444443
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=6.2e-19 Score=196.42 Aligned_cols=233 Identities=11% Similarity=0.093 Sum_probs=172.4
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
...|+|++..+ ..|++|+.||.|++|| .+++.++++.+|.+.|.++++ ++++|++++.|++ |++||
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~---------i~i~d 202 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGA---------IHHHD 202 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSE---------EEEEE
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCC---------EEEEe
Confidence 34588887643 5899999999999999 778888899999999999999 4689999999998 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS 181 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~ 181 (823)
+.... ..+..+..+ ..+ |++++|+|++.. +|+|+.||.|++|+.. .+.....+..+..+
T Consensus 203 ~~~~~---------~~~~~~~~~--~~~---v~~~~~~~~~~~---l~s~~~d~~v~iwd~~----~~~~~~~~~~~~~~ 261 (401)
T 4aez_A 203 VRIAN---------HQIGTLQGH--SSE---VCGLAWRSDGLQ---LASGGNDNVVQIWDAR----SSIPKFTKTNHNAA 261 (401)
T ss_dssp TTSSS---------CEEEEEECC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEETT----CSSEEEEECCCSSC
T ss_pred cccCc---------ceeeEEcCC--CCC---eeEEEEcCCCCE---EEEEeCCCeEEEccCC----CCCccEEecCCcce
Confidence 98421 244455433 334 999999999999 9999999999999863 12222334456789
Q ss_pred cceEEEeecCCeEEEEEEc---CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEe--e--CCeEEEEecCCCC
Q 037368 182 VMGLGFRVDGQALQLFAVT---PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIG--R--PEAVYFYEVDGRG 254 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t---~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~--~--~~~I~i~~~~g~~ 254 (823)
|++++|+|++. .++++++ ++.|++||+... .+...+. ++..+.+++|+|++..+++ + ++.|++|+.....
T Consensus 262 v~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~~~-~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 262 VKAVAWCPWQS-NLLATGGGTMDKQIHFWNAATG-ARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp CCEEEECTTST-TEEEEECCTTTCEEEEEETTTC-CEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE
T ss_pred EEEEEECCCCC-CEEEEecCCCCCEEEEEECCCC-CEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc
Confidence 99999999875 4556554 667999999754 3445554 5667899999999885543 2 5699999987432
Q ss_pred cc--ccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 255 PC--WAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 255 ~~--~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
.. ..+.+| ...+.| .+.++++++ .+++|++||+.++..
T Consensus 339 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~-----~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 339 LTKQVDIPAHDTRVLYSALSPDGRILSTAA-----SDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEEEEEECCSSCCCEEEECTTSSEEEEEC-----TTSEEEEEECCC---
T ss_pred ceeEEEecCCCCCEEEEEECCCCCEEEEEe-----CCCcEEEEECCCCcc
Confidence 21 233444 344455 567888876 468999999987543
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.83 E-value=1.5e-19 Score=199.03 Aligned_cols=201 Identities=11% Similarity=0.053 Sum_probs=143.1
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCe---eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEE
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLK---FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~---~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
..|+|+++.+ .+|++|+.||+|++|| .+++ ....+.+|...|.+++|+|++++|++++.|++ |++
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------i~i 126 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV---------ISV 126 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC---------EEE
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe---------EEE
Confidence 4588887753 5899999999999999 4444 56678899999999999999999999999998 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccc--c----------
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIAR--E---------- 167 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~--~---------- 167 (823)
||+.... ...+.+.+.. .+..+ |++++|+|+++. +|+|+.||+|++|+..... .
T Consensus 127 wd~~~~~-------~~~~~~~~~~-~h~~~---v~~~~~~~~~~~---l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 127 CYFEQEN-------DWWVSKHLKR-PLRST---ILSLDWHPNNVL---LAAGCADRKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp CCC------------CCCCEEECS-SCCSC---EEEEEECTTSSE---EEEEESSSCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred EEECCcc-------cceeeeEeec-ccCCC---eEEEEEcCCCCE---EEEEeCCCEEEEEEEEecccCCCccccccccc
Confidence 9998532 1113444432 02333 999999999999 9999999999999863100 0
Q ss_pred --cccceeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCc---ceEEccCCCccceecccCCCeEEE-ee
Q 037368 168 --RITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPK---RQFLDNIGCSTNSVAMSDRLELII-GR 241 (823)
Q Consensus 168 --~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~---~~~l~~~~~~~~~~~~s~~~~liv-~~ 241 (823)
.+.....+ .+.++|++++|+|+|+ .++.++.++.|++||+.....+ ...+..|...+.+++|+|+|++++ +.
T Consensus 193 ~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 193 LPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred cchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 01111112 5678899999999985 3444445667999999865431 455677888899999999998765 55
Q ss_pred CCeEEEEecC
Q 037368 242 PEAVYFYEVD 251 (823)
Q Consensus 242 ~~~I~i~~~~ 251 (823)
++.+.+|+..
T Consensus 271 ~~~~~~~~~~ 280 (377)
T 3dwl_C 271 NYSPILLQGN 280 (377)
T ss_dssp SSSEEEECCC
T ss_pred CCcEEEEEeC
Confidence 6677788754
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=3.4e-18 Score=193.11 Aligned_cols=252 Identities=14% Similarity=0.187 Sum_probs=180.9
Q ss_pred CCeEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 26 GNITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
..|.|+.+.++.+++|+.||+|++|| .+++.+.++.+|...|.++.++ ++.++|+|.|++ |++||+..
T Consensus 160 ~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~---------i~~wd~~~ 228 (445)
T 2ovr_B 160 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDAT---------LRVWDIET 228 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE---------EEEEESSS
T ss_pred CCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCE---------EEEEECCC
Confidence 45888888889999999999999999 7889999999999999999995 578999999998 99999984
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcce
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
. .++.++..+ ..+ |+++++ ++.. +++|+.||.|++|+.. .+.....+..+.++|++
T Consensus 229 ~----------~~~~~~~~~--~~~---v~~~~~--~~~~---l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 229 G----------QCLHVLMGH--VAA---VRCVQY--DGRR---VVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYS 284 (445)
T ss_dssp C----------CEEEEEECC--SSC---EEEEEE--CSSC---EEEEETTSCEEEEEGG----GTEEEEEECCCSSCEEE
T ss_pred C----------cEEEEEcCC--ccc---EEEEEE--CCCE---EEEEcCCCEEEEEECC----CCcEeEEecCCCCceEE
Confidence 2 356666533 334 999999 6678 9999999999999863 12223334456789999
Q ss_pred EEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCccccccC--
Q 037368 185 LGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGPCWAFEG-- 261 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~~~~~~g-- 261 (823)
+.| ++. .++..+.++.|++||+... .....+..|...+.++.+++ +.+++++ ++.|++|+++.......+.+
T Consensus 285 ~~~--~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 359 (445)
T 2ovr_B 285 LQF--DGI-HVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPN 359 (445)
T ss_dssp EEE--CSS-EEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTT
T ss_pred EEE--CCC-EEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEEccCC
Confidence 999 443 3444445667999999754 35566767777677666643 3555555 56899999864332233333
Q ss_pred ----CeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEec------cc-cceeEE-EeecCcEEEEEcC
Q 037368 262 ----EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL------VV-KEVSHM-LCEWGNIILVMTD 322 (823)
Q Consensus 262 ----~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~------~i-~~v~~v-~~~~~~~~vvs~~ 322 (823)
....+.+.+.++++++ .+++|+|||+.++...... .. ..+..+ +++.+.++++++.
T Consensus 360 ~~~~~v~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 360 KHQSAVTCLQFNKNFVITSS-----DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp SCSSCEEEEEECSSEEEEEE-----TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred CCCCCEEEEEECCCEEEEEe-----CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc
Confidence 2567888889998888 4589999999876433222 11 125444 5556555555443
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.83 E-value=1.1e-18 Score=190.94 Aligned_cols=201 Identities=10% Similarity=0.035 Sum_probs=148.4
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEe--EeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFG--FQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~--~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
..|+|+++. +..|++|+.||.|++|| .+++.... +.+|...|.+++|+|++++|++++.|++ |++|
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------v~i~ 123 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV---------ISIC 123 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS---------EEEE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE---------EEEE
Confidence 458777764 46899999999999999 56654333 4679999999999999999999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccc--------------c
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIA--------------R 166 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~--------------~ 166 (823)
|+.... ...+...+. ..+. ..|++++|+|++.. +++|+.||.|++|+.... .
T Consensus 124 d~~~~~-------~~~~~~~~~-~~~~---~~i~~~~~~~~~~~---l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (372)
T 1k8k_C 124 YFEQEN-------DWWVCKHIK-KPIR---STVLSLDWHPNSVL---LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 189 (372)
T ss_dssp EEETTT-------TEEEEEEEC-TTCC---SCEEEEEECTTSSE---EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCC
T ss_pred EecCCC-------cceeeeeee-cccC---CCeeEEEEcCCCCE---EEEEcCCCCEEEEEccccccccccccccccccc
Confidence 998532 111122221 1112 33999999999999 999999999999984210 0
Q ss_pred ccccceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeCCe
Q 037368 167 ERITRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRPEA 244 (823)
Q Consensus 167 ~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~~~ 244 (823)
..+.....+..+.++|+++.|+|+++ .++++ .++.|++||+... .+...+..+...+.+++|+|++.+++ +.++.
T Consensus 190 ~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~ 266 (372)
T 1k8k_C 190 PFGELMFESSSSCGWVHGVCFSANGS--RVAWVSHDSTVCLADADKK-MAVATLASETLPLLAVTFITESSLVAAGHDCF 266 (372)
T ss_dssp CTTCEEEECCCCSSCEEEEEECSSSS--EEEEEETTTEEEEEEGGGT-TEEEEEECSSCCEEEEEEEETTEEEEEETTSS
T ss_pred chhhheEecCCCCCeEEEEEECCCCC--EEEEEeCCCEEEEEECCCC-ceeEEEccCCCCeEEEEEecCCCEEEEEeCCe
Confidence 01112222334578999999999984 45544 4567999999754 35666777778899999999998765 55568
Q ss_pred EEEEecCC
Q 037368 245 VYFYEVDG 252 (823)
Q Consensus 245 I~i~~~~g 252 (823)
|++|+...
T Consensus 267 i~i~~~~~ 274 (372)
T 1k8k_C 267 PVLFTYDS 274 (372)
T ss_dssp CEEEEEET
T ss_pred EEEEEccC
Confidence 99999864
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=1.8e-18 Score=187.04 Aligned_cols=260 Identities=12% Similarity=0.068 Sum_probs=178.0
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-CCCe---eeEeEeecccceeEEEEecCCC-EEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-RGLK---FNFGFQAHSSSVLFLQQLKQRN-FLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~---~~~~~~~H~~~V~~i~~~~~~~-~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|++++ +.+|++|+.||.|++|+ .+++ ....+.+|...|++++|+|+++ +|++++.|++ |+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~---------i~ 82 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE---------IL 82 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC---------EE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCe---------EE
Confidence 458888764 36899999999999999 4444 3456779999999999999999 9999999998 99
Q ss_pred EEeC-CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccc----ccee
Q 037368 99 VFDL-DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI----TRFK 173 (823)
Q Consensus 99 vWdl-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~----~k~~ 173 (823)
+||+ .... ...+....+..+ |++++|+| +.. +++|+.||.|++|+..-..... .+..
T Consensus 83 ~wd~~~~~~-----------~~~~~~~~~~~~---v~~l~~~~-~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 83 KVDLIGSPS-----------FQALTNNEANLG---ICRICKYG-DDK---LIAASWDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EECSSSSSS-----------EEECBSCCCCSC---EEEEEEET-TTE---EEEEETTSEEEEECHHHHTTBCEEEEESCS
T ss_pred EEEeccCCc-----------eEeccccCCCCc---eEEEEeCC-CCE---EEEEcCCCeEEEEcccccccccccccCCee
Confidence 9999 6421 223332002334 99999999 888 9999999999999853100000 1111
Q ss_pred EEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecC-CCC-cceEEccCCCccceecccC-CCeEE-Eee-CCeEEEE
Q 037368 174 LQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQN-QPP-KRQFLDNIGCSTNSVAMSD-RLELI-IGR-PEAVYFY 248 (823)
Q Consensus 174 ~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~-~~~-~~~~l~~~~~~~~~~~~s~-~~~li-v~~-~~~I~i~ 248 (823)
....+.++|++++|++++ ++.++.++.|++|++.. ... .......+...+.+++|+| ++.++ +++ ++.|++|
T Consensus 145 ~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 145 NNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp SSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred eEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 112357889999999874 44445566899999976 332 2223345667889999999 88754 444 4589999
Q ss_pred ecCCC------CccccccC------------CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEecc---ccc
Q 037368 249 EVDGR------GPCWAFEG------------EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLV---VKE 305 (823)
Q Consensus 249 ~~~g~------~~~~~~~g------------~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~---i~~ 305 (823)
+.+.. .....+.+ ....+.| .+.++++++ .+++|++||+.++....... -..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~h~~~ 296 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-----SDGIISCWNLQTRKKIKNFAKFNEDS 296 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-----TTSCEEEEETTTTEEEEECCCCSSSE
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec-----CCceEEEEcCccHhHhhhhhcccCCC
Confidence 98754 22233333 2334555 467888777 45899999998776544332 223
Q ss_pred eeEEEeecCcEEEEEc
Q 037368 306 VSHMLCEWGNIILVMT 321 (823)
Q Consensus 306 v~~v~~~~~~~~vvs~ 321 (823)
+..+. +++..++.++
T Consensus 297 v~~~~-~~~~~l~s~s 311 (342)
T 1yfq_A 297 VVKIA-CSDNILCLAT 311 (342)
T ss_dssp EEEEE-ECSSEEEEEE
T ss_pred ceEec-CCCCeEEEEe
Confidence 55555 6676665544
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.83 E-value=6.6e-19 Score=196.14 Aligned_cols=236 Identities=14% Similarity=0.155 Sum_probs=167.2
Q ss_pred CCeEEEeeC---CCEEEEEecCCeEEEEc-CCC-------eeeEeEeecccceeEEEEecCC-CEEEEEecCCCCccccc
Q 037368 26 GNITCCSSG---RGKVVIGCDDGAVSLLD-RGL-------KFNFGFQAHSSSVLFLQQLKQR-NFLVTVGEDEQVSAQQS 93 (823)
Q Consensus 26 ~~is~~~~~---~~~l~~gs~dG~i~~~d-~~~-------~~~~~~~~H~~~V~~i~~~~~~-~~l~s~s~D~~~~~~~~ 93 (823)
..|+|++++ +..|++|+.||+|++|+ .++ +.+..+.+|...|.+++|+|++ ++|+|+|.|++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~------ 155 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV------ 155 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC------
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE------
Confidence 358888874 35899999999999999 555 5677899999999999999998 69999999998
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccccee
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~ 173 (823)
|+|||+... .++.++....+..+ |++++|+|+++. +++|+.||.|++|+.. .+....
T Consensus 156 ---i~iwd~~~~----------~~~~~~~~~~~~~~---v~~~~~~~~~~~---l~~~~~d~~i~iwd~~----~~~~~~ 212 (402)
T 2aq5_A 156 ---ILVWDVGTG----------AAVLTLGPDVHPDT---IYSVDWSRDGAL---ICTSCRDKRVRVIEPR----KGTVVA 212 (402)
T ss_dssp ---EEEEETTTT----------EEEEEECTTTCCSC---EEEEEECTTSSC---EEEEETTSEEEEEETT----TTEEEE
T ss_pred ---EEEEECCCC----------CccEEEecCCCCCc---eEEEEECCCCCE---EEEEecCCcEEEEeCC----CCceee
Confidence 999999842 35555521122233 999999999999 9999999999999863 122222
Q ss_pred EE-ecCCC-CcceEEEeecCCeEEEEEE----cCCeEEEEEecCCCCcceEEc-cCCCccceecccCCCeEE-E-ee-CC
Q 037368 174 LQ-VDNQC-SVMGLGFRVDGQALQLFAV----TPNSVILFSLQNQPPKRQFLD-NIGCSTNSVAMSDRLELI-I-GR-PE 243 (823)
Q Consensus 174 ~~-~~~~~-~It~l~fs~dg~~~~l~~~----t~~~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~~~~li-v-~~-~~ 243 (823)
.+ ..+.+ .++.+.|+++| ..++++ .++.|.+||+.....+..... .+...+.+++|+|++.++ + ++ ++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg 290 (402)
T 2aq5_A 213 EKDRPHEGTRPVHAVFVSEG--KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS 290 (402)
T ss_dssp EEECSSCSSSCCEEEECSTT--EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS
T ss_pred eeccCCCCCcceEEEEcCCC--cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC
Confidence 33 23444 48999999998 567776 345699999976543334433 456678889999988754 3 43 56
Q ss_pred eEEEEecCCCCc-cc---ccc--CCeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 244 AVYFYEVDGRGP-CW---AFE--GEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 244 ~I~i~~~~g~~~-~~---~~~--g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
.|++|++....+ .. .+. +....++|..+..++++ .++.+++|++.++.+
T Consensus 291 ~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s-----~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 291 SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN-----KCEIARFYKLHERKC 345 (402)
T ss_dssp CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG-----GTEEEEEEEEETTEE
T ss_pred eEEEEEecCCCcceEeecccccCCcccceEEeccccccee-----cceeEEEEEcCCCcE
Confidence 899999975443 11 122 33344555433222222 346999999977643
No 74
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.83 E-value=3.1e-19 Score=197.50 Aligned_cols=235 Identities=16% Similarity=0.130 Sum_probs=163.3
Q ss_pred CeEEEee-C-CCEEEEEecCCeEEEEc-CC-------CeeeEeEeecccceeEEEEecCC-CEEEEEecCCCCcccccce
Q 037368 27 NITCCSS-G-RGKVVIGCDDGAVSLLD-RG-------LKFNFGFQAHSSSVLFLQQLKQR-NFLVTVGEDEQVSAQQSAV 95 (823)
Q Consensus 27 ~is~~~~-~-~~~l~~gs~dG~i~~~d-~~-------~~~~~~~~~H~~~V~~i~~~~~~-~~l~s~s~D~~~~~~~~~~ 95 (823)
.|.++++ + +.+|++|+.||.|++|+ .+ ....+.+.+|.+.|.++.|+|++ ..|+|+|.|++
T Consensus 110 ~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~-------- 181 (380)
T 3iz6_a 110 WVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT-------- 181 (380)
T ss_dssp TCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC--------
T ss_pred CEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc--------
Confidence 3544444 3 35889999999999998 22 12355788999999999999964 57999999998
Q ss_pred eEEEEeCCCCCCCCCCCCCCceEEEEEec-cCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEccccccccccee
Q 037368 96 CLKVFDLDKMEPEGTSSTSPDCIGILRVF-TSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173 (823)
Q Consensus 96 ~vkvWdl~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~ 173 (823)
|++||+... .++..+... ...+ ...|.+++++| ++.. +++|+.||+|++|+... .+....
T Consensus 182 -i~~wd~~~~----------~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~---l~sgs~D~~v~~wd~~~---~~~~~~ 243 (380)
T 3iz6_a 182 -CVLWDVTTG----------QRISIFGSEFPSGH-TADVLSLSINSLNANM---FISGSCDTTVRLWDLRI---TSRAVR 243 (380)
T ss_dssp -EEEECTTTC----------CEEEEECCCSSSSC-CSCEEEEEECSSSCCE---EEEEETTSCEEEEETTT---TCCCCE
T ss_pred -EEEEEcCCC----------cEEEEeecccCCCC-ccCeEEEEeecCCCCE---EEEEECCCeEEEEECCC---CCcceE
Confidence 999999843 244444211 0011 13499999987 7788 99999999999998631 122334
Q ss_pred EEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccC-------CCccceecccCCCeEEE-ee-CC
Q 037368 174 LQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNI-------GCSTNSVAMSDRLELII-GR-PE 243 (823)
Q Consensus 174 ~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~-------~~~~~~~~~s~~~~liv-~~-~~ 243 (823)
.+..+.++|++++|+|+|+ .+++++ ++.|++||+.... ...++..+ ...+.+++|+|+|.+++ |. ++
T Consensus 244 ~~~~h~~~v~~v~~~p~~~--~l~s~s~D~~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQ--RFGTGSDDGTCRLFDMRTGH-QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp EECCCSSCCCEEEECTTSS--EEEEECSSSCEEEEETTTTE-EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred EECCcCCCeEEEEEecCCC--eEEEEcCCCeEEEEECCCCc-EEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 4556788999999999984 566565 4569999997542 33444322 12367899999998665 43 45
Q ss_pred eEEEEecCCCCccccc----cCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCC
Q 037368 244 AVYFYEVDGRGPCWAF----EGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 244 ~I~i~~~~g~~~~~~~----~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
.|++|+.........+ .+| ...++| .+.+|++++ .|++|+||++.+.
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-----~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS-----WDKNLKIWAFSGH 376 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC-----TTSCEEEEECCSS
T ss_pred CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee-----CCCCEEEEecCCC
Confidence 8999998633222222 333 334444 677888887 4689999998753
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.82 E-value=3.8e-18 Score=185.89 Aligned_cols=257 Identities=16% Similarity=0.183 Sum_probs=174.3
Q ss_pred CCCeEEEeeCC-----CEEEEEecCCeEEEEc-CC-Ceee-EeEeecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 25 SGNITCCSSGR-----GKVVIGCDDGAVSLLD-RG-LKFN-FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 25 ~~~is~~~~~~-----~~l~~gs~dG~i~~~d-~~-~~~~-~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
...|+|+++++ ..|++|+.||.|++|| .+ +..+ ..+.+|.+.|++++|+|++++|+|++.|++
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------- 109 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT--------- 109 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE---------
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc---------
Confidence 34589888764 4789999999999999 43 4443 789999999999999999999999999998
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE--ecCCCCcceEEEEEeCCeEEEEEcccccccccceeE
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV--LEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~--~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~ 174 (823)
|++||+... .++.. . .+..+ |++++| +|++.. +++|+.||.|++|+.. .+ +...
T Consensus 110 v~iwd~~~~----------~~~~~-~--~~~~~---v~~~~~~~~~~~~~---l~~~~~dg~i~vwd~~----~~-~~~~ 165 (368)
T 3mmy_A 110 AKMWDLSSN----------QAIQI-A--QHDAP---VKTIHWIKAPNYSC---VMTGSWDKTLKFWDTR----SS-NPMM 165 (368)
T ss_dssp EEEEETTTT----------EEEEE-E--ECSSC---EEEEEEEECSSCEE---EEEEETTSEEEEECSS----CS-SCSE
T ss_pred EEEEEcCCC----------Cceee-c--cccCc---eEEEEEEeCCCCCE---EEEccCCCcEEEEECC----CC-cEEE
Confidence 999999842 23332 2 22334 999999 899888 9999999999999863 11 2222
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc-cCCCccceecccCCCe-----EEEee-CCeEEE
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD-NIGCSTNSVAMSDRLE-----LIIGR-PEAVYF 247 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~~~~-----liv~~-~~~I~i 247 (823)
.......+..+.+.++ ..+.++.++.+.+|++........... .......|+++.+++. +++++ ++.|++
T Consensus 166 ~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 166 VLQLPERCYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp EEECSSCEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEecCCCceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 2334556777777654 456666677899999976432222221 2333445555443221 55554 568999
Q ss_pred EecCCCCc---cccccCC---------------eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEec--cccc
Q 037368 248 YEVDGRGP---CWAFEGE---------------KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSL--VVKE 305 (823)
Q Consensus 248 ~~~~g~~~---~~~~~g~---------------~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~--~i~~ 305 (823)
|+.+.... ...+.++ ...+.| .+.++++++ .+++|+|||+.++...... +-..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~ 317 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-----SDGRFSFWDKDARTKLKTSEQLDQP 317 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-----TTSCEEEEETTTTEEEEECCCCSSC
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-----cCCeEEEEECCCCcEEEEecCCCCC
Confidence 99875422 2234443 234455 456888877 4589999999987654432 2233
Q ss_pred eeEE-EeecCcEEEEEcC
Q 037368 306 VSHM-LCEWGNIILVMTD 322 (823)
Q Consensus 306 v~~v-~~~~~~~~vvs~~ 322 (823)
+..+ +++++..+++++.
T Consensus 318 v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 318 ISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEEEECTTSSCEEEEEC
T ss_pred ceEEEECCCCCeEEEEec
Confidence 5554 6777777666553
No 76
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.82 E-value=1.4e-18 Score=187.61 Aligned_cols=257 Identities=12% Similarity=0.059 Sum_probs=163.7
Q ss_pred EEEecCCeEEEEc-----CCCeeeEeEeecccceeEEEEecC-CCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 39 VIGCDDGAVSLLD-----RGLKFNFGFQAHSSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 39 ~~gs~dG~i~~~d-----~~~~~~~~~~~H~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
.+|...|+-.+|- .+.++..+++||++.|++|+|+|+ +++|+|+|.|++ |+|||+...+.
T Consensus 8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~---------i~vWd~~~~~~----- 73 (340)
T 4aow_A 8 SSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKT---------IIMWKLTRDET----- 73 (340)
T ss_dssp ------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSC---------EEEEEECCSSS-----
T ss_pred ccccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCe---------EEEEECCCCCc-----
Confidence 3455555543332 335667789999999999999997 689999999998 99999985431
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCC
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQ 192 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~ 192 (823)
....+.++++.+ ..+ |++++|+|+++. +++|+.||.|++|+.. ..............+..+.+++++.
T Consensus 74 ~~~~~~~~l~~h--~~~---V~~~~~s~dg~~---l~s~~~d~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (340)
T 4aow_A 74 NYGIPQRALRGH--SHF---VSDVVISSDGQF---ALSGSWDGTLRLWDLT----TGTTTRRFVGHTKDVLSVAFSSDNR 141 (340)
T ss_dssp CSEEEEEEECCC--SSC---EEEEEECTTSSE---EEEEETTSEEEEEETT----TTEEEEEEECCSSCEEEEEECTTSS
T ss_pred ccceeeEEEeCC--CCC---EEEEEECCCCCE---EEEEcccccceEEeec----ccceeeeecCCCCceeEEEEeecCc
Confidence 111234444422 334 999999999999 9999999999999863 1112222334467788888988874
Q ss_pred eEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCC--eE-EEee-CCeEEEEecCCCCccccccCC---eE
Q 037368 193 ALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRL--EL-IIGR-PEAVYFYEVDGRGPCWAFEGE---KK 264 (823)
Q Consensus 193 ~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~--~l-iv~~-~~~I~i~~~~g~~~~~~~~g~---~~ 264 (823)
.++++ .++.+++|++.........+..|...+.++.|++++ .+ ++++ ++.|++|+.........+.+| ..
T Consensus 142 --~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~ 219 (340)
T 4aow_A 142 --QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLN 219 (340)
T ss_dssp --CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred --cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEE
Confidence 44444 456799999875432223334667778888887644 33 4444 468999998754333345554 34
Q ss_pred EEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccc-eeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 265 LLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKE-VSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 265 ~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~-v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
.+++ .+.++++++ .+++|+|||+.+........... +..+ +++.+.++..+.++. ++++
T Consensus 220 ~~~~s~~~~~l~s~s-----~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~-i~iw 282 (340)
T 4aow_A 220 TVTVSPDGSLCASGG-----KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPS-IKIW 282 (340)
T ss_dssp EEEECTTSSEEEEEE-----TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTE-EEEE
T ss_pred EEEECCCCCEEEEEe-----CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCE-EEEE
Confidence 4554 567888887 45899999998876544332222 4444 455555555555554 4444
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.82 E-value=1.6e-18 Score=191.33 Aligned_cols=231 Identities=12% Similarity=0.067 Sum_probs=160.5
Q ss_pred CCCeEEEeeCC---CEEEEEecCCeEEEEcCCCeeeEeEeecc---cceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 25 SGNITCCSSGR---GKVVIGCDDGAVSLLDRGLKFNFGFQAHS---SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 25 ~~~is~~~~~~---~~l~~gs~dG~i~~~d~~~~~~~~~~~H~---~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...|+|+++.+ ..|++|+.||.|++||..++....+..|. ..|.+++|+|++++|++++.|++ |+
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------i~ 188 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGR---------LL 188 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSE---------EE
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCC---------EE
Confidence 34588887754 58899999999999995567666777654 78999999999999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccccceeEEec
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+||+.. .++.++..+ ..+ |++++|+|++. . +++|+.||.|++|+..-.... ........
T Consensus 189 i~d~~~-----------~~~~~~~~h--~~~---v~~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~ 248 (383)
T 3ei3_B 189 LLGLDG-----------HEIFKEKLH--KAK---VTHAEFNPRCDWL---MATSSVDATVKLWDLRNIKDK-NSYIAEMP 248 (383)
T ss_dssp EEETTS-----------CEEEEEECS--SSC---EEEEEECSSCTTE---EEEEETTSEEEEEEGGGCCST-TCEEEEEE
T ss_pred EEECCC-----------CEEEEeccC--CCc---EEEEEECCCCCCE---EEEEeCCCEEEEEeCCCCCcc-cceEEEec
Confidence 999952 245565533 334 99999999998 8 999999999999986421111 12222235
Q ss_pred CCCCcceEEEee-cCCeEEEEEE-cCCeEEEEEecCCCCcceEEccC-------CCcc----------ceecccCCCeEE
Q 037368 178 NQCSVMGLGFRV-DGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNI-------GCST----------NSVAMSDRLELI 238 (823)
Q Consensus 178 ~~~~It~l~fs~-dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~-------~~~~----------~~~~~s~~~~li 238 (823)
+.++|++++|+| +|+ .++++ .++.|++||+..... ...+..+ ...+ .+++++|+|++
T Consensus 249 ~~~~v~~~~~s~~~~~--~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~- 324 (383)
T 3ei3_B 249 HEKPVNAAYFNPTDST--KLLTTDQRNEIRVYSSYDWSK-PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL- 324 (383)
T ss_dssp CSSCEEEEEECTTTSC--EEEEEESSSEEEEEETTBTTS-CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-
T ss_pred CCCceEEEEEcCCCCC--EEEEEcCCCcEEEEECCCCcc-ccccccccccccccccceEEeccCCCCceEEEecCCccc-
Confidence 688999999999 884 45444 466799999976432 2333212 1112 22455666666
Q ss_pred Eee-CCeEEEEecCCCCccccccCC-----eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 239 IGR-PEAVYFYEVDGRGPCWAFEGE-----KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 239 v~~-~~~I~i~~~~g~~~~~~~~g~-----~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+++ ++.|++|++........+.++ ...++| .+.+|++++ +++|+|||+.+
T Consensus 325 s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s------d~~i~iw~~~~ 382 (383)
T 3ei3_B 325 LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM------GFNILIWNRED 382 (383)
T ss_dssp CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE------TTEEEEEECC-
T ss_pred ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec------CCcEEEEecCC
Confidence 433 468999998743333344332 233344 567887774 37999999874
No 78
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=6.7e-18 Score=191.17 Aligned_cols=236 Identities=11% Similarity=0.104 Sum_probs=162.2
Q ss_pred CeEEEee-CCCEEEEEecCCeEEEEc-CCCe---eeEeEeec--------------------------------------
Q 037368 27 NITCCSS-GRGKVVIGCDDGAVSLLD-RGLK---FNFGFQAH-------------------------------------- 63 (823)
Q Consensus 27 ~is~~~~-~~~~l~~gs~dG~i~~~d-~~~~---~~~~~~~H-------------------------------------- 63 (823)
+++|+++ +++.+++++.+|.|++|| .+|+ .+.+|+.|
T Consensus 6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIK 85 (450)
T ss_dssp CCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------------
T ss_pred cEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccc
Confidence 5666665 345576677899999999 7777 66677643
Q ss_pred ----------------ccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccC
Q 037368 64 ----------------SSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTS 126 (823)
Q Consensus 64 ----------------~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~ 126 (823)
.+.|++++|+|+|++| +|++.|++ |+|||+... ...+++.+..+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~---------v~iwd~~~~--------~~~~~~~~~~~~~ 148 (450)
T 2vdu_B 86 RTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKS---------LLVFDVDKT--------SKNVLKLRKRFCF 148 (450)
T ss_dssp --------------CCCCCEEEEEECTTSSEEEEEEGGGTE---------EEEEEECSS--------SSSCEEEEEEEEC
T ss_pred ccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCe---------EEEEECcCC--------CCceeeeeecccC
Confidence 3379999999999996 89999998 999999721 0124555543322
Q ss_pred CCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeec---CCeEEEEEEc-CC
Q 037368 127 QFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVD---GQALQLFAVT-PN 202 (823)
Q Consensus 127 ~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~d---g~~~~l~~~t-~~ 202 (823)
..+ |++++|+|++.. +++|+.+|.|.+|+..-..........+..+.++|++++|+|+ + ..+++++ ++
T Consensus 149 ~~~---v~~~~~sp~~~~---l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~--~~l~s~~~d~ 220 (450)
T 2vdu_B 149 SKR---PNAISIAEDDTT---VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH--QFIITSDRDE 220 (450)
T ss_dssp SSC---EEEEEECTTSSE---EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC--EEEEEEETTS
T ss_pred CCC---ceEEEEcCCCCE---EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC--cEEEEEcCCC
Confidence 233 999999999999 9999999999999853100000011133456789999999999 7 4555554 56
Q ss_pred eEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcccccc--------------------
Q 037368 203 SVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFE-------------------- 260 (823)
Q Consensus 203 ~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~-------------------- 260 (823)
.|++||+.........+.+|...+.+++|+ ++.++ +++ ++.|++|++........+.
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 799999975432223355788889999999 77654 444 4699999987432111111
Q ss_pred --------CCeEEEEee--CcEEEEEEecCCCCccEEEEEeC
Q 037368 261 --------GEKKLLGWF--RGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 261 --------g~~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
.....+.|. +.++++++. .+++|+|||+
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~----~d~~i~iw~~ 337 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVE----ATKCIIILEM 337 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEET----TCSEEEEEEE
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEEC----CCCeEEEEEe
Confidence 112344553 678887763 3589999999
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.82 E-value=1.1e-18 Score=196.57 Aligned_cols=242 Identities=13% Similarity=0.141 Sum_probs=172.6
Q ss_pred CCCeEEEeeCC---CEEEEEecCCeEEEEc-CC----------CeeeEeEeecccceeEEEEecCCC-EEEEEecCCCCc
Q 037368 25 SGNITCCSSGR---GKVVIGCDDGAVSLLD-RG----------LKFNFGFQAHSSSVLFLQQLKQRN-FLVTVGEDEQVS 89 (823)
Q Consensus 25 ~~~is~~~~~~---~~l~~gs~dG~i~~~d-~~----------~~~~~~~~~H~~~V~~i~~~~~~~-~l~s~s~D~~~~ 89 (823)
...|+|+++.+ ..+++|+.+|.|++|+ .. +..+.++.+|.+.|.+++|+|++. +|+|++.||+
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~-- 205 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT-- 205 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC--
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe--
Confidence 44587777654 3789999999999999 33 567788999999999999999988 9999999998
Q ss_pred ccccceeEEEEeCCCCCCCCCCCCCC--ceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEccccc
Q 037368 90 AQQSAVCLKVFDLDKMEPEGTSSTSP--DCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIAR 166 (823)
Q Consensus 90 ~~~~~~~vkvWdl~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~ 166 (823)
|++|++..... ... .....+. .+..+ |++++|+| ++.. +|+|+.||.|++|+..-..
T Consensus 206 -------i~vwd~~~~~~-----~~~~~~~~~~~~--~h~~~---v~~v~~~p~~~~~---l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 206 -------ICLWDINATPK-----EHRVIDAKNIFT--GHTAV---VEDVAWHLLHESL---FGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp -------EEEEETTSCCB-----GGGEEECSEEEC--CCSSC---EEEEEECSSCTTE---EEEEETTSEEEEEETTCSC
T ss_pred -------EEEEeCCCCCC-----CCceeccceeec--CCCCC---EeeeEEeCCCCCE---EEEEeCCCeEEEEECCCCC
Confidence 99999985210 000 0112222 12233 99999999 6677 9999999999999863100
Q ss_pred ccccceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCe--EEEee-C
Q 037368 167 ERITRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE--LIIGR-P 242 (823)
Q Consensus 167 ~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~--liv~~-~ 242 (823)
.......+..+..+|++++|+|++. .+++++ .++.|++||++....+...+..|...+.+++|+|++. +++++ +
T Consensus 266 -~~~~~~~~~~~~~~v~~i~~~p~~~-~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 266 -TSKPSHTVDAHTAEVNCLSFNPYSE-FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp -SSSCSEEEECCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred -CCcceeEeecCCCCeEEEEeCCCCC-CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 0112233445678999999999885 345555 4567999999864456777878888999999999884 45554 4
Q ss_pred CeEEEEecCCCC-------------c-cccccCC---eEEEEee--Cc-EEEEEEecCCCCccEEEEEeCCCC
Q 037368 243 EAVYFYEVDGRG-------------P-CWAFEGE---KKLLGWF--RG-YLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 243 ~~I~i~~~~g~~-------------~-~~~~~g~---~~~i~~~--~~-ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
+.|++|++...+ . ...+.+| ...+.|. +. .+++++ .+++|+||++...
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s-----~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS-----EDNIMQVWQMAEN 411 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEEEECHH
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE-----CCCCEEEeEcccc
Confidence 689999986421 1 1234444 4566665 44 565565 4689999998653
No 80
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.82 E-value=8.3e-18 Score=179.70 Aligned_cols=264 Identities=12% Similarity=0.078 Sum_probs=178.5
Q ss_pred EEEee-CCCEEEEEecCCeEEEEc-CCCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 29 TCCSS-GRGKVVIGCDDGAVSLLD-RGLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 29 s~~~~-~~~~l~~gs~dG~i~~~d-~~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
+|++. +++.|++| .|++|++|| .++++++.++ +|...|++++|+|+|++|+|+|.|++ |++||+..
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~---------v~iw~~~~ 98 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE---------VQLWDVQQ 98 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSE---------EEEEETTT
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCc---------EEEeecCC
Confidence 55654 45667776 599999999 7788888776 46788999999999999999999998 99999984
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcce
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
. .+++++..+ ..+ +.+++. ++.. +++|+.+|.+.+|.... .......+..+...+..
T Consensus 99 ~----------~~~~~~~~h--~~~---~~~~~~--~~~~---l~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 99 Q----------KRLRNMTSH--SAR---VGSLSW--NSYI---LSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCG 155 (318)
T ss_dssp T----------EEEEEEECC--SSC---EEEEEE--ETTE---EEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEE
T ss_pred c----------eeEEEecCc--cce---EEEeec--CCCE---EEEEecCCceEeeecCC---CceeEEEEcCccCceEE
Confidence 2 366666533 222 665555 4557 99999999999997531 11223334556788999
Q ss_pred EEEeecCCeEEEEEE-cCCeEEEEEecCCCC---cceEEccCCCccceecccCCCe-EE-Eee---CCeEEEEecCCCCc
Q 037368 185 LGFRVDGQALQLFAV-TPNSVILFSLQNQPP---KRQFLDNIGCSTNSVAMSDRLE-LI-IGR---PEAVYFYEVDGRGP 255 (823)
Q Consensus 185 l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~---~~~~l~~~~~~~~~~~~s~~~~-li-v~~---~~~I~i~~~~g~~~ 255 (823)
+.|.++++ .++++ .++.|++||+..... .......+...+.++.++|++. ++ ++. ++.|++|+......
T Consensus 156 ~~~~~~~~--~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~ 233 (318)
T 4ggc_A 156 LRWAPDGR--HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 233 (318)
T ss_dssp EEECTTSS--EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE
T ss_pred EEEcCCCC--EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc
Confidence 99999984 45545 456799999875321 2233345556677888877543 32 222 35899999874432
Q ss_pred cccc--cCCeE--EEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEE--EeccccceeEE-EeecCcEEEEEcCCeEEEE
Q 037368 256 CWAF--EGEKK--LLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIA--HSLVVKEVSHM-LCEWGNIILVMTDKSVLCI 328 (823)
Q Consensus 256 ~~~~--~g~~~--~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~--~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l 328 (823)
.... ..... .+.+.+.++++++.. .+++|+|||+.++... +..+-..|..+ +++++.+++.++.+..+++
T Consensus 234 ~~~~~~~~~v~~~~~~~~~~~~~~~sg~---~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 234 LSAVDAHSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccceeeeeeeeecccccceEEEEEc---CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 2111 11222 334456788877643 5789999999875443 33344446665 7778887777766667777
Q ss_pred ee
Q 037368 329 GE 330 (823)
Q Consensus 329 ~~ 330 (823)
|.
T Consensus 311 Wd 312 (318)
T 4ggc_A 311 WR 312 (318)
T ss_dssp EC
T ss_pred EE
Confidence 63
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.82 E-value=7.5e-19 Score=190.99 Aligned_cols=236 Identities=13% Similarity=0.122 Sum_probs=165.9
Q ss_pred CCCeEEEeeCC-----CEEEEEecCCeEEEEc-CCCe-eeEeEeecccceeEEEE------ecCCCEEEEEecCCCCccc
Q 037368 25 SGNITCCSSGR-----GKVVIGCDDGAVSLLD-RGLK-FNFGFQAHSSSVLFLQQ------LKQRNFLVTVGEDEQVSAQ 91 (823)
Q Consensus 25 ~~~is~~~~~~-----~~l~~gs~dG~i~~~d-~~~~-~~~~~~~H~~~V~~i~~------~~~~~~l~s~s~D~~~~~~ 91 (823)
...|+|+++.+ ..+++|+.||.|++|| .+++ .+..+.+|...|.++.+ +|++++|+|++.|++
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~---- 140 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT---- 140 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC----
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe----
Confidence 44688887743 6789999999999999 5565 78899999999999965 678999999999998
Q ss_pred ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEE----EecCCCCcceEEEEEeCCeEEEEEcccccc
Q 037368 92 QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFL----VLEEAPPILLIAIGLDNGCIYCIKGDIARE 167 (823)
Q Consensus 92 ~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va----~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~ 167 (823)
|++||+.... .++..+..+.. .....+++++ |+|++.. +++|+.||.|++|+..
T Consensus 141 -----i~vwd~~~~~---------~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~---l~~~~~d~~i~i~d~~---- 198 (357)
T 3i2n_A 141 -----VKVWDPRQKD---------DPVANMEPVQG-ENKRDCWTVAFGNAYNQEERV---VCAGYDNGDIKLFDLR---- 198 (357)
T ss_dssp -----EEEECTTSCS---------SCSEEECCCTT-SCCCCEEEEEEECCCC-CCCE---EEEEETTSEEEEEETT----
T ss_pred -----EEEEeCCCCC---------CcceeccccCC-CCCCceEEEEEEeccCCCCCE---EEEEccCCeEEEEECc----
Confidence 9999998532 12334433211 1112388988 6889999 9999999999999863
Q ss_pred cccceeEEecCCCCcceEEEee---cCCeEEEEEEcCCeEEEEEecCCCCcceEE-----ccCCCccceecccCCCe--E
Q 037368 168 RITRFKLQVDNQCSVMGLGFRV---DGQALQLFAVTPNSVILFSLQNQPPKRQFL-----DNIGCSTNSVAMSDRLE--L 237 (823)
Q Consensus 168 ~~~k~~~~~~~~~~It~l~fs~---dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l-----~~~~~~~~~~~~s~~~~--l 237 (823)
..+......+..+|++++|+| ++. .++.++.++.|++||+.... +...+ ..|...+.+++|+|++. +
T Consensus 199 -~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 275 (357)
T 3i2n_A 199 -NMALRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQH-PTKGFASVSEKAHKSTVWQVRHLPQNRELF 275 (357)
T ss_dssp -TTEEEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEE-TTTEEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred -cCceeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCC-cccceeeeccCCCcCCEEEEEECCCCCcEE
Confidence 222333345678999999999 773 33444446679999987543 22222 37888899999999887 4
Q ss_pred EEee-CCeEEEEecCCCCc-------------------cccccCC---eEEEEe--eCcEEE-EEEecCCCCccEEEEEe
Q 037368 238 IIGR-PEAVYFYEVDGRGP-------------------CWAFEGE---KKLLGW--FRGYLL-CVIADQRNSKNIFNVYD 291 (823)
Q Consensus 238 iv~~-~~~I~i~~~~g~~~-------------------~~~~~g~---~~~i~~--~~~ylv-~~s~d~~~~~~~I~I~D 291 (823)
++++ ++.|++|+++.... ...+.+| ...++| .+.+++ +++ .+++|+|||
T Consensus 276 ~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~-----~d~~i~iw~ 350 (357)
T 3i2n_A 276 LTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS-----FDQTVRVLI 350 (357)
T ss_dssp EEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE-----TTSEEEEEE
T ss_pred EEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec-----CCCcEEEEE
Confidence 4454 46899999863211 1123333 345555 456777 455 468999999
Q ss_pred CCC
Q 037368 292 LKN 294 (823)
Q Consensus 292 ~~~ 294 (823)
+.+
T Consensus 351 ~~~ 353 (357)
T 3i2n_A 351 VTK 353 (357)
T ss_dssp ECC
T ss_pred CCC
Confidence 875
No 82
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.82 E-value=6.8e-19 Score=189.59 Aligned_cols=241 Identities=12% Similarity=0.095 Sum_probs=158.4
Q ss_pred eEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE
Q 037368 59 GFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV 138 (823)
Q Consensus 59 ~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~ 138 (823)
.+.+|++.|++++|+|+|++|||+|.|++ |+|||+... ...++.+++.| ..+ |++++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~---------v~lwd~~~~--------~~~~~~~l~gH--~~~---V~~v~~ 65 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRS---------VKIFDVRNG--------GQILIADLRGH--EGP---VWQVAW 65 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTE---------EEEEEEETT--------EEEEEEEEECC--SSC---EEEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCe---------EEEEEecCC--------CcEEEEEEcCC--Ccc---EEEEEe
Confidence 46799999999999999999999999998 999999732 11245555533 344 999999
Q ss_pred ec--CCCCcceEEEEEeCCeEEEEEcccccccc-cceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCC
Q 037368 139 LE--EAPPILLIAIGLDNGCIYCIKGDIARERI-TRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPP 214 (823)
Q Consensus 139 ~~--d~~~~~~ia~G~~dG~V~l~~~~~~~~~~-~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~ 214 (823)
+| +++. +|+|+.||+|++|+.. ... .+...+..+.++|++++|+|++....+++++ ++.|++|++.....
T Consensus 66 ~~~~~~~~---l~s~s~D~~v~iWd~~---~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 66 AHPMYGNI---LASCSYDRKVIIWREE---NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp CCGGGSSC---EEEEETTSCEEEECCS---SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred CCCCCCCE---EEEEECCCEEEEEECC---CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 76 4789 9999999999999853 111 1222334567899999999983113566665 55699999975432
Q ss_pred --cceEEccCCCccceecccCC-----------------C-eEEEee-CCeEEEEecCCCC---ccccccCC---eEEEE
Q 037368 215 --KRQFLDNIGCSTNSVAMSDR-----------------L-ELIIGR-PEAVYFYEVDGRG---PCWAFEGE---KKLLG 267 (823)
Q Consensus 215 --~~~~l~~~~~~~~~~~~s~~-----------------~-~liv~~-~~~I~i~~~~g~~---~~~~~~g~---~~~i~ 267 (823)
....+..|...+.+++|+|+ + .+++|+ |+.|++|+.++.+ ....+.+| ...++
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE
T ss_pred cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE
Confidence 13344567777888999886 2 355555 4589999987432 22356666 45666
Q ss_pred eeC------cEEEEEEecCCCCccEEEEEeCCCC------EEEEeccccceeEE-EeecCcEEEEEcCCeEEEEeecC
Q 037368 268 WFR------GYLLCVIADQRNSKNIFNVYDLKNR------LIAHSLVVKEVSHM-LCEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 268 ~~~------~ylv~~s~d~~~~~~~I~I~D~~~~------~i~~~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
|.. .++++++ .|++|+|||+.+. ......+-..+..+ +++.+.+++.++.+..++++..+
T Consensus 220 ~sp~~~~~~~~las~s-----~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 220 WAPSIGLPTSTIASCS-----QDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCCSSCSCCEEEEEE-----TTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ecCCCCCCCceEEEEc-----CCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 643 5677777 4689999998651 01111121224444 67777777776655566676544
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.1e-18 Score=190.18 Aligned_cols=229 Identities=10% Similarity=0.079 Sum_probs=159.8
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
.+..+++|+.||+|++|| .+++.+.++. ...|.++.++|. ++|+|.|++ |++|+....... -..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~---------i~~w~~~~~~~~-~~~ 111 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNR---------LLLLYPGNQITI-LDS 111 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTE---------EEEEETTTEEEE-EET
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCe---------EEEEEccCceEE-eec
Confidence 446789999999999999 7788777776 577888989887 999999998 999988632000 000
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEec--CCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcceEEEee
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLE--EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMGLGFRV 189 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~--d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~l~fs~ 189 (823)
.+..+++.+... +..+ |.+++|+| ++.. +|+|+.||+|++|+.. .+....... .+..+|++++|+|
T Consensus 112 ~~~~~~~~~~~~-~~~~---v~~~~~~~~~~~~~---l~s~s~dg~i~~wd~~----~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 112 KTNKVLREIEVD-SANE---IIYMYGHNEVNTEY---FIWADNRGTIGFQSYE----DDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp TTCCEEEEEECC-CSSC---EEEEECCC---CCE---EEEEETTCCEEEEESS----SSCEEEEECCCSSCCCCEEEECT
T ss_pred CCcceeEEeecC-CCCC---EEEEEcCCCCCCCE---EEEEeCCCcEEEEECC----CCcEEEEEecCCCCceEEEEECC
Confidence 012234343321 1233 99999999 9999 9999999999999863 122222221 2356799999999
Q ss_pred cCCeEEEEEEc-CCeEEEEEecCCCCcceEEcc-CCCccceecccCCCeEE-EeeCCeEEEEecCCCCccccccC---C-
Q 037368 190 DGQALQLFAVT-PNSVILFSLQNQPPKRQFLDN-IGCSTNSVAMSDRLELI-IGRPEAVYFYEVDGRGPCWAFEG---E- 262 (823)
Q Consensus 190 dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~-~~~~~~~~~~s~~~~li-v~~~~~I~i~~~~g~~~~~~~~g---~- 262 (823)
+| ..+++++ ++.|++||+.........+.. |...+.+++|+|+|.++ +++++.|++|+++.......+.. +
T Consensus 181 dg--~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~ 258 (343)
T 3lrv_A 181 DS--LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPE 258 (343)
T ss_dssp TS--CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC--
T ss_pred CC--CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeeccccccc
Confidence 98 4666655 556999999865433356766 88899999999998754 56677999999874432222221 2
Q ss_pred ----eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 263 ----KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 263 ----~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...++| .+.++++++. .++.|+||++..
T Consensus 259 ~~~~~~~~~~~~~g~~l~~~s~----~d~~i~v~~~~~ 292 (343)
T 3lrv_A 259 FKTGTVTYDIDDSGKNMIAYSN----ESNSLTIYKFDK 292 (343)
T ss_dssp ---CCEEEEECTTSSEEEEEET----TTTEEEEEEECT
T ss_pred ccccceEEEECCCCCEEEEecC----CCCcEEEEEEcc
Confidence 112444 5779888774 257999999854
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.82 E-value=7.8e-19 Score=194.35 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=166.1
Q ss_pred CCCeEEEeeC------C---CEEEEEecCCeEEEEc-CCCee-----eEeEeec-----ccceeEEEEe----cCCCE-E
Q 037368 25 SGNITCCSSG------R---GKVVIGCDDGAVSLLD-RGLKF-----NFGFQAH-----SSSVLFLQQL----KQRNF-L 79 (823)
Q Consensus 25 ~~~is~~~~~------~---~~l~~gs~dG~i~~~d-~~~~~-----~~~~~~H-----~~~V~~i~~~----~~~~~-l 79 (823)
...|+|+++. + .+|++|+.||.|++|+ .+++. ...+.+| ...|.+++|+ |++++ |
T Consensus 62 ~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRL 141 (397)
T ss_dssp TTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEE
T ss_pred CCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEE
Confidence 3458777754 3 5789999999999999 55554 7788999 5999999999 99999 9
Q ss_pred EEEecCCCCcccccceeEEEEeCCC------CCCCCCCCCCCceEEEEEe-----ccCCCCCCceEEEEEecCCCCcceE
Q 037368 80 VTVGEDEQVSAQQSAVCLKVFDLDK------MEPEGTSSTSPDCIGILRV-----FTSQFPEAKITSFLVLEEAPPILLI 148 (823)
Q Consensus 80 ~s~s~D~~~~~~~~~~~vkvWdl~~------~~~~~~~~~~~~~~~~~~~-----~~~~~p~~~v~~va~~~d~~~~~~i 148 (823)
++++.|++ |++||+.. ... ..-.| ...+.. ..+. ..|++++|+|++ . +
T Consensus 142 ~~~~~dg~---------i~iwd~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~---~~i~~~~~~~~~-~---l 200 (397)
T 1sq9_A 142 VATDVKGT---------TYIWKFHPFADESNSLT---LNWSP--TLELQGTVESPMTPS---QFATSVDISERG-L---I 200 (397)
T ss_dssp EEEETTSC---------EEEEEEESSSSHHHHTT---TCCCC--EEEEEEEECCSSSSC---CCCCEEEECTTS-E---E
T ss_pred EEEeCCCc---------EEEEeCCccccccccce---eeccC--cceeeeeeccccCCC---CCceEEEECCCc-e---E
Confidence 99999998 99999985 210 00001 113322 1112 339999999999 9 9
Q ss_pred EEEEeCCeEEEEEcccccccccceeEEec---C---CCCcceEEEeecCCeEEEEEEc-C---CeEEEEEecCCCCcceE
Q 037368 149 AIGLDNGCIYCIKGDIARERITRFKLQVD---N---QCSVMGLGFRVDGQALQLFAVT-P---NSVILFSLQNQPPKRQF 218 (823)
Q Consensus 149 a~G~~dG~V~l~~~~~~~~~~~k~~~~~~---~---~~~It~l~fs~dg~~~~l~~~t-~---~~V~~~d~~~~~~~~~~ 218 (823)
++|+.||.|++|+.. .+.....+.. + ..+|++++|+|+++ .+++++ + +.|++||+... .....
T Consensus 201 ~~~~~dg~i~i~d~~----~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~--~l~~~~~d~~~g~i~i~d~~~~-~~~~~ 273 (397)
T 1sq9_A 201 ATGFNNGTVQISELS----TLRPLYNFESQHSMINNSNSIRSVKFSPQGS--LLAIAHDSNSFGCITLYETEFG-ERIGS 273 (397)
T ss_dssp EEECTTSEEEEEETT----TTEEEEEEECCC---CCCCCEEEEEECSSTT--EEEEEEEETTEEEEEEEETTTC-CEEEE
T ss_pred EEEeCCCcEEEEECC----CCceeEEEeccccccccCCccceEEECCCCC--EEEEEecCCCCceEEEEECCCC-cccce
Confidence 999999999999863 1222223333 4 78999999999984 455555 4 57999999754 35556
Q ss_pred Ecc-------------CCCccceecccCCCeEE-Eee-CCeEEEEecCCCCcccccc-----------------------
Q 037368 219 LDN-------------IGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDGRGPCWAFE----------------------- 260 (823)
Q Consensus 219 l~~-------------~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g~~~~~~~~----------------------- 260 (823)
+.. |...+.+++|+|++.++ +++ ++.|++|++........+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 274 LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp ECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred eccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc
Confidence 666 78889999999988755 444 4689999987433222333
Q ss_pred -CCeEEEEeeC------------cEEEEEEecCCCCccEEEEEeCCCC
Q 037368 261 -GEKKLLGWFR------------GYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 261 -g~~~~i~~~~------------~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
+....+.|.. .++++++ .+++|+|||+.++
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~-----~dg~i~iw~~~~g 396 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVC-----LDRSIRWFREAGG 396 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEE-----TTTEEEEEEEEC-
T ss_pred CCceeEEEeccccccccccccccceEEEec-----CCCcEEEEEcCCC
Confidence 2245666654 3777776 4689999998654
No 85
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.82 E-value=3.5e-18 Score=200.38 Aligned_cols=270 Identities=11% Similarity=0.052 Sum_probs=185.7
Q ss_pred CCCeEEEeeC--CCEEEEEecCCeEEEEc-CCC----eeeEeEeecccc-eeEEEEec--CCCEEEEEecCCCCcccccc
Q 037368 25 SGNITCCSSG--RGKVVIGCDDGAVSLLD-RGL----KFNFGFQAHSSS-VLFLQQLK--QRNFLVTVGEDEQVSAQQSA 94 (823)
Q Consensus 25 ~~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~----~~~~~~~~H~~~-V~~i~~~~--~~~~l~s~s~D~~~~~~~~~ 94 (823)
...|+|++.+ +..|++|+ +|.|++|+ .++ +....+.+|.+. |++++|+| ++++|+|++.|++
T Consensus 18 ~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~------- 89 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK------- 89 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE-------
T ss_pred cCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCE-------
Confidence 3457666653 35778887 89999999 667 788899999999 99999999 9999999999998
Q ss_pred eeEEEEeCCCCCCCCCCCC--CCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEccccccc
Q 037368 95 VCLKVFDLDKMEPEGTSST--SPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIARER 168 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~~~ 168 (823)
|+|||+..... .+ ...++..+..+ ..+ |++++|+|+++. +++|+.+ |.|.+|+.
T Consensus 90 --v~vw~~~~~~~----~~~~~~~~~~~~~~~--~~~---v~~~~~s~~~~~---l~~~~~~~~~~~~v~~~d~------ 149 (615)
T 1pgu_A 90 --VIVWGWTFDKE----SNSVEVNVKSEFQVL--AGP---ISDISWDFEGRR---LCVVGEGRDNFGVFISWDS------ 149 (615)
T ss_dssp --EEEEEEEEEGG----GTEEEEEEEEEEECC--SSC---EEEEEECTTSSE---EEEEECCSSCSEEEEETTT------
T ss_pred --EEEEeCCCCcc----cccccccccchhhcc--ccc---EEEEEEeCCCCE---EEEeccCCCCccEEEEEEC------
Confidence 99999963200 00 11234444422 334 999999999999 9999987 78888863
Q ss_pred ccceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCC---ccceecccCC-CeEE-Eee-
Q 037368 169 ITRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGC---STNSVAMSDR-LELI-IGR- 241 (823)
Q Consensus 169 ~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~---~~~~~~~s~~-~~li-v~~- 241 (823)
+.....+..+.++|++++|+|++. ..++++ .++.|++||+... .....+..|.. .+.|++|+|+ +.++ +++
T Consensus 150 ~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 150 GNSLGEVSGHSQRINACHLKQSRP-MRSMTVGDDGSVVFYQGPPF-KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp CCEEEECCSCSSCEEEEEECSSSS-CEEEEEETTTEEEEEETTTB-EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred CCcceeeecCCccEEEEEECCCCC-cEEEEEeCCCcEEEEeCCCc-ceeeeecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 222333445678999999999984 245444 4567999998653 35566666766 8999999998 8754 454
Q ss_pred CCeEEEEecCCCCccccc-c---CC---eEEEEe-eCcEEEEEEecCCCCccEEEEEeCCCCEEEEecccc-----c-ee
Q 037368 242 PEAVYFYEVDGRGPCWAF-E---GE---KKLLGW-FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVK-----E-VS 307 (823)
Q Consensus 242 ~~~I~i~~~~g~~~~~~~-~---g~---~~~i~~-~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~-----~-v~ 307 (823)
++.|++|++........+ . ++ ...+.| .+.++++++ .+++|++||+.++......... . +.
T Consensus 228 dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 228 DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-----ADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEc-----CCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 468999998743333334 2 33 445666 667888887 4589999999876554332221 2 33
Q ss_pred EEEeecCcEEEEEcCCeEEEEe
Q 037368 308 HMLCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 308 ~v~~~~~~~~vvs~~~~v~~l~ 329 (823)
.+....+..++++..+..++++
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~ 324 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFY 324 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEE
T ss_pred EEEeCCCCeEEEEECCCCEEEE
Confidence 3333355555554444344444
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.82 E-value=3.6e-18 Score=185.56 Aligned_cols=269 Identities=12% Similarity=0.120 Sum_probs=174.5
Q ss_pred CCCeEEEeeCC-C-E-EEEEec---CCeEEEEc-CCCeeeEeE-eecccceeEEEEecC---CCEEEEEecCCCCccccc
Q 037368 25 SGNITCCSSGR-G-K-VVIGCD---DGAVSLLD-RGLKFNFGF-QAHSSSVLFLQQLKQ---RNFLVTVGEDEQVSAQQS 93 (823)
Q Consensus 25 ~~~is~~~~~~-~-~-l~~gs~---dG~i~~~d-~~~~~~~~~-~~H~~~V~~i~~~~~---~~~l~s~s~D~~~~~~~~ 93 (823)
...|+|+++++ + . +++|+. ||.|++|| .+++..... .+|..+|.+++|+|+ |++|++++.|++
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~------ 91 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN------ 91 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC------
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe------
Confidence 34588887754 3 4 466766 99999999 666654333 379999999999998 699999999998
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEE------EecCCCCcceEEEEEeCCeEEEEEcccccc
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFL------VLEEAPPILLIAIGLDNGCIYCIKGDIARE 167 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va------~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~ 167 (823)
|++||+.... .++..+..+ ..+ |++++ |+|+++. +++|+.||.|++|+..-
T Consensus 92 ---i~iwd~~~~~---------~~~~~~~~~--~~~---v~~~~~~~~~~~s~~~~~---l~~~~~d~~i~vwd~~~--- 148 (357)
T 3i2n_A 92 ---LHIWNLEAPE---------MPVYSVKGH--KEI---INAIDGIGGLGIGEGAPE---IVTGSRDGTVKVWDPRQ--- 148 (357)
T ss_dssp ---EEEECTTSCS---------SCSEEECCC--SSC---EEEEEEESGGGCC-CCCE---EEEEETTSCEEEECTTS---
T ss_pred ---EEEEeCCCCC---------ccEEEEEec--ccc---eEEEeeccccccCCCccE---EEEEeCCCeEEEEeCCC---
Confidence 9999998531 134444422 334 99995 5788889 99999999999998631
Q ss_pred cccceeEEecC----CCCcceEE----EeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccC---CC
Q 037368 168 RITRFKLQVDN----QCSVMGLG----FRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD---RL 235 (823)
Q Consensus 168 ~~~k~~~~~~~----~~~It~l~----fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~---~~ 235 (823)
.......+..+ ..+|+++. |+++++ .+++++ ++.|++||+.... . .....+...+.+++|+| ++
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~-~-~~~~~~~~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEER--VVCAGYDNGDIKLFDLRNMA-L-RWETNIKNGVCSLEFDRKDISM 224 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC--EEEEEETTSEEEEEETTTTE-E-EEEEECSSCEEEEEESCSSSSC
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCC--EEEEEccCCeEEEEECccCc-e-eeecCCCCceEEEEcCCCCCCC
Confidence 11122233222 34899998 677773 555555 4679999997643 2 23345677889999998 66
Q ss_pred e-EEEee-CCeEEEEecCCCCccccc-----cCC---eEEEEee--Cc-EEEEEEecCCCCccEEEEEeCCCC-------
Q 037368 236 E-LIIGR-PEAVYFYEVDGRGPCWAF-----EGE---KKLLGWF--RG-YLLCVIADQRNSKNIFNVYDLKNR------- 295 (823)
Q Consensus 236 ~-liv~~-~~~I~i~~~~g~~~~~~~-----~g~---~~~i~~~--~~-ylv~~s~d~~~~~~~I~I~D~~~~------- 295 (823)
. +++++ ++.|++|+++.......+ .++ ...+.|. +. ++++++ .+++|+|||+...
T Consensus 225 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 225 NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG-----GAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE-----TTSEEEEEEEECCSCC--CC
T ss_pred CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe-----CCCcEEEeecCCCccccccc
Confidence 6 44554 468999998643222222 243 4455554 44 566665 4689999998642
Q ss_pred -------------EE-EEeccccceeEE-EeecCcEEE-EEcCCeEEEEeec
Q 037368 296 -------------LI-AHSLVVKEVSHM-LCEWGNIIL-VMTDKSVLCIGEK 331 (823)
Q Consensus 296 -------------~i-~~~~~i~~v~~v-~~~~~~~~v-vs~~~~v~~l~~~ 331 (823)
.+ .+..+-..+..+ +++++..++ .++.+..++++..
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 11 122232335544 677777666 3554555666544
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3e-19 Score=201.61 Aligned_cols=250 Identities=11% Similarity=0.061 Sum_probs=173.1
Q ss_pred CCeEEEee-CCC-EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 26 GNITCCSS-GRG-KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 26 ~~is~~~~-~~~-~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|.+++. ++| .+|+|+.|++|+ | ++..+++++|.+.|.+++|+|+| .|++ +++|+..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d--~~~~~~l~gh~~~v~~V~FsPdg-------~~~~---------~~~~~~~ 75 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--Q--PKYAKDINCNSKNLFHVKEFPLE-------FENK---------LDFELAQ 75 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--E--ECCCSCCSSBGGGTEEEEEECCC-------CCCT---------TTTSCCC
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--c--ccccceecCCCccEEEEEECCCC-------Ccce---------EEEEeCC
Confidence 45655554 444 789999999999 6 33334568999999999999998 5665 5666544
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCC---
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQC--- 180 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~--- 180 (823)
... .+.. .+. ..|++++|+|||.. +|+|+.||+|++|++. + ....+ ++..
T Consensus 76 ~~~-------------~~~~-~~~---~~V~~vawSPdG~~---LAs~s~dg~V~iwd~~-----~-~l~~l-~~~~~~~ 128 (588)
T 2j04_A 76 QNG-------------LLNS-QPV---CYPRVCKPSPIDDW---MAVLSNNGNVSVFKDN-----K-MLTNL-DSKGNLS 128 (588)
T ss_dssp SSC-------------SSTT-SCS---CCEEEEEECSSSSC---EEEEETTSCEEEEETT-----E-EEEEC-CCSSCST
T ss_pred Cce-------------Eeec-CCC---CcEEEEEECCCCCE---EEEEeCCCcEEEEeCC-----c-eeeec-cCCCccc
Confidence 211 0110 111 23999999999999 9999999999999853 1 11222 2333
Q ss_pred --CcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCC------cceEE----ccCCCccceecccCCCeEEEee-CCeEE
Q 037368 181 --SVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPP------KRQFL----DNIGCSTNSVAMSDRLELIIGR-PEAVY 246 (823)
Q Consensus 181 --~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~------~~~~l----~~~~~~~~~~~~s~~~~liv~~-~~~I~ 246 (823)
.|.+++|||||+ .|++++ +++|++|++.++.. ...++ .+|...+.+++|+|+| +++++ |++|+
T Consensus 129 ~~sv~svafSPDG~--~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVr 205 (588)
T 2j04_A 129 SRTYHCFEWNPIES--SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVF 205 (588)
T ss_dssp TTCEEEEEECSSSS--CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEE
T ss_pred cccEEEEEEcCCCC--EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEE
Confidence 599999999994 677776 45699999986531 13455 4566789999999999 77655 56999
Q ss_pred EEecCCCCcc---ccc-cCC---eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEE-EEe-ccccceeEE-E--eecC
Q 037368 247 FYEVDGRGPC---WAF-EGE---KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI-AHS-LVVKEVSHM-L--CEWG 314 (823)
Q Consensus 247 i~~~~g~~~~---~~~-~g~---~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i-~~~-~~i~~v~~v-~--~~~~ 314 (823)
+|++.++... ..+ ++| ...++|.+.++++++ +++|++||+.++.. .+. ++...+..+ + ++++
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~------~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC------PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC------SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC
T ss_pred EEECCCCccccceeeecccccCcEEEEEEECCEEEEEe------CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC
Confidence 9999876521 124 344 456777777887775 37999999998776 554 444444444 6 7777
Q ss_pred cEEEEEcCCeEEEEeecC
Q 037368 315 NIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 315 ~~~vvs~~~~v~~l~~~~ 332 (823)
..++++..+.. +++..+
T Consensus 280 ~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEECSSCEE-EEEESS
T ss_pred CEEEEEcCCCC-EEEeec
Confidence 77777774555 776554
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.9e-18 Score=194.29 Aligned_cols=239 Identities=12% Similarity=0.156 Sum_probs=158.7
Q ss_pred CCeEEEeeCC---CEEEEEecCCeEEEEc-CC---Ce---eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccce
Q 037368 26 GNITCCSSGR---GKVVIGCDDGAVSLLD-RG---LK---FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAV 95 (823)
Q Consensus 26 ~~is~~~~~~---~~l~~gs~dG~i~~~d-~~---~~---~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~ 95 (823)
..|+|+++++ .+|++|+.||+|++|| .+ +. ....+ +|.++|++++|+|++++|+|+|.|++
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~-------- 134 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQ-------- 134 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSE--------
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCE--------
Confidence 4688887744 4899999999999999 33 32 23233 59999999999999999999999998
Q ss_pred eEEEEeCCCCCCCCCCCCCC------ceEEEEEeccCCCCCCceEEEE--EecCCCCcceEEEEEeCCeEEEEEcccccc
Q 037368 96 CLKVFDLDKMEPEGTSSTSP------DCIGILRVFTSQFPEAKITSFL--VLEEAPPILLIAIGLDNGCIYCIKGDIARE 167 (823)
Q Consensus 96 ~vkvWdl~~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~v~~va--~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~ 167 (823)
|++||+.... .+.. .+++.+...... .+..+.+++ ++|++.. +++|+.||.|++|+..
T Consensus 135 -i~vwd~~~~~-----~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~---l~~~~~d~~i~iwd~~---- 200 (437)
T 3gre_A 135 -IIVLKVNHYQ-----QESEVKFLNCECIRKINLKNFG-KNEYAVRMRAFVNEEKSL---LVALTNLSRVIIFDIR---- 200 (437)
T ss_dssp -EEEEEEEEEE-----ETTEEEEEEEEEEEEEEGGGGS-SCCCEEEEEEEECSSCEE---EEEEETTSEEEEEETT----
T ss_pred -EEEEEecccc-----CCceeeccccceeEEEEccCcc-cccCceEEEEEEcCCCCE---EEEEeCCCeEEEEeCC----
Confidence 9999995210 0110 122222221100 113377777 5688889 9999999999999863
Q ss_pred cccceeEEec--CCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEc-cCCCcccee----cccCCCeEEE
Q 037368 168 RITRFKLQVD--NQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLD-NIGCSTNSV----AMSDRLELII 239 (823)
Q Consensus 168 ~~~k~~~~~~--~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~-~~~~~~~~~----~~s~~~~liv 239 (823)
.+.....+.. +.++|++++|+|++ ..+++++ ++.|++||+... .+...+. .+...+.++ .|+|++.+++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~ 277 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEEC--CVLILGTTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVV 277 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTS--CEEEEEETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCC--CEEEEEcCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEE
Confidence 1222333333 56899999999998 4566555 456999999763 3445554 566678888 5667786554
Q ss_pred -eeC-CeEEEEecCCCCcccc------------------------ccC--C---eEEEEeeC-cEEEEEEecCCCCccEE
Q 037368 240 -GRP-EAVYFYEVDGRGPCWA------------------------FEG--E---KKLLGWFR-GYLLCVIADQRNSKNIF 287 (823)
Q Consensus 240 -~~~-~~I~i~~~~g~~~~~~------------------------~~g--~---~~~i~~~~-~ylv~~s~d~~~~~~~I 287 (823)
++. +.|++|+++....... +.| + ...+++.+ .++++++ .+++|
T Consensus 278 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~-----~d~~i 352 (437)
T 3gre_A 278 GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDE-----ATSSI 352 (437)
T ss_dssp EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEG-----GGTEE
T ss_pred EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecC-----CCCeE
Confidence 444 4799999863211111 112 2 23344543 4666665 46899
Q ss_pred EEEeCCCC
Q 037368 288 NVYDLKNR 295 (823)
Q Consensus 288 ~I~D~~~~ 295 (823)
++||+.++
T Consensus 353 ~~wd~~~~ 360 (437)
T 3gre_A 353 VMFSLNEL 360 (437)
T ss_dssp EEEETTCG
T ss_pred EEEECCCc
Confidence 99999764
No 89
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.81 E-value=1.6e-18 Score=192.96 Aligned_cols=238 Identities=8% Similarity=-0.011 Sum_probs=163.8
Q ss_pred EEEeeCCCEE---EEEecCCeEEEEc-C-CCe---eeEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeEEE
Q 037368 29 TCCSSGRGKV---VIGCDDGAVSLLD-R-GLK---FNFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 29 s~~~~~~~~l---~~gs~dG~i~~~d-~-~~~---~~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
++++.++..+ ++|+.+|.|++|+ . .++ ....+.+|.+.|++++|+| ++++|+|+|.||+ |+|
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~---------v~v 108 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCT---------VMV 108 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSE---------EEE
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCe---------EEE
Confidence 3455555443 3478999999999 2 332 3456889999999999999 9999999999998 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC-CCcceEEEEEeCCeEEEEEcccccccccceeEE--e
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA-PPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--V 176 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~ 176 (823)
||+...... .....++..+..+ ..+ |++++|+|++ .. +++|+.||+|++|+.. .+.....+ .
T Consensus 109 w~~~~~~~~---~~~~~~~~~~~~h--~~~---v~~~~~~p~~~~~---l~s~~~dg~i~iwd~~----~~~~~~~~~~~ 173 (402)
T 2aq5_A 109 WEIPDGGLV---LPLREPVITLEGH--TKR---VGIVAWHPTAQNV---LLSAGCDNVILVWDVG----TGAAVLTLGPD 173 (402)
T ss_dssp EECCTTCCS---SCBCSCSEEEECC--SSC---EEEEEECSSBTTE---EEEEETTSCEEEEETT----TTEEEEEECTT
T ss_pred EEccCCCCc---cccCCceEEecCC--CCe---EEEEEECcCCCCE---EEEEcCCCEEEEEECC----CCCccEEEecC
Confidence 999853210 0000234455533 334 9999999998 58 9999999999999863 22223334 3
Q ss_pred cCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEE-ccCCC-ccceecccCCCeEEEee-----CCeEEEEe
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFL-DNIGC-STNSVAMSDRLELIIGR-----PEAVYFYE 249 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~liv~~-----~~~I~i~~ 249 (823)
.+.++|++++|+|+|+ .++.++.++.|++||+.... ....+ ..|.. .+.++.|+|++.+++++ ++.|++|+
T Consensus 174 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp TCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 4578999999999984 33444456679999997643 44445 45544 37889999999877543 45899999
Q ss_pred cCCCCc-c--cccc--CCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 250 VDGRGP-C--WAFE--GEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 250 ~~g~~~-~--~~~~--g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
++.... . ..+. +....+.| .+.++++++. .+++|++||+.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~----~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK----GDSSIRYFEITSEA 301 (402)
T ss_dssp TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET----TCSCEEEEEECSST
T ss_pred CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc----CCCeEEEEEecCCC
Confidence 874332 1 1222 22344444 4667766553 36899999997643
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2e-19 Score=207.10 Aligned_cols=232 Identities=13% Similarity=0.060 Sum_probs=155.0
Q ss_pred CCeEEEee-CCCEEEEEecCCeEEEEc-CCC-eeeEeEeecccceeEE--EEecCC-CEEEEEecCCCCcccccceeEEE
Q 037368 26 GNITCCSS-GRGKVVIGCDDGAVSLLD-RGL-KFNFGFQAHSSSVLFL--QQLKQR-NFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs~dG~i~~~d-~~~-~~~~~~~~H~~~V~~i--~~~~~~-~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
..|+|+++ +++.|++|+.||+|++|| .++ .+...+++|++.|++| .++|+| ++|||+|.|++ |||
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t---------vkl 337 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY---------FYI 337 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE---------EEE
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe---------EEE
Confidence 45888876 457899999999999999 444 3455799999999999 567777 89999999998 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCC
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
||+... .++.++..+... ..|.+++|+|++.. +|+|+.|++|++|+.. .+.....+..+.
T Consensus 338 WD~~~~----------~~~~~~~~~~~~---~~v~~v~fsp~~~~---l~s~~~d~tv~lwd~~----~~~~~~~l~gH~ 397 (524)
T 2j04_B 338 FNPKDI----------ATTKTTVSRFRG---SNLVPVVYCPQIYS---YIYSDGASSLRAVPSR----AAFAVHPLVSRE 397 (524)
T ss_dssp ECGGGH----------HHHCEEEEECSC---CSCCCEEEETTTTE---EEEECSSSEEEEEETT----CTTCCEEEEECS
T ss_pred EECCCC----------Cccccccccccc---CcccceEeCCCcCe---EEEeCCCCcEEEEECc----ccccceeeecCC
Confidence 999742 244344322111 22889999999999 9999999999999852 122334556678
Q ss_pred CCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEcc-----CCCccceecccCCCeEEEeeCC-eEEEEecCC
Q 037368 180 CSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDN-----IGCSTNSVAMSDRLELIIGRPE-AVYFYEVDG 252 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~-----~~~~~~~~~~s~~~~liv~~~~-~I~i~~~~g 252 (823)
++|++|+|+|+|+ .|+++ .++.|++|++..+ ....+.. +...+.+++|+|+|..+..+++ .++.|+..|
T Consensus 398 ~~V~sva~Sp~g~--~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g 473 (524)
T 2j04_B 398 TTITAIGVSRLHP--MVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVND 473 (524)
T ss_dssp SCEEEEECCSSCC--BCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-----
T ss_pred CceEEEEeCCCCC--eEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCC
Confidence 8999999999985 44445 4667999998653 2222111 1124568899999986655443 233343333
Q ss_pred CCccccccCC---eEEEEeeCc-----EEEEEEecCCCCccEEEEEeCCCCE
Q 037368 253 RGPCWAFEGE---KKLLGWFRG-----YLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 253 ~~~~~~~~g~---~~~i~~~~~-----ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
. ....+.|| ...++|..+ .+++++ .+++|+||++....
T Consensus 474 ~-~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~-----~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 474 V-SKAKIDAHGINITCTKWNETSAGGKCYAFSN-----SAGLLTLEYLSLEH 519 (524)
T ss_dssp ---------CCCSCCCEEECCSTTTTTEEEEEC-----TTSEEEEEECSCC-
T ss_pred c-ceeeecCCCceEEEEECCCCCCccHHHHhhc-----cCceEEEEEccccc
Confidence 2 12344444 345677544 565555 46999999987643
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.3e-18 Score=210.33 Aligned_cols=235 Identities=10% Similarity=0.068 Sum_probs=170.6
Q ss_pred CCeEEEeeC--CCEEEEEecCCeEEEEc-C--CCeeeEeEeecccceeEEEEecC--CCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSSG--RGKVVIGCDDGAVSLLD-R--GLKFNFGFQAHSSSVLFLQQLKQ--RNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~~--~~~l~~gs~dG~i~~~d-~--~~~~~~~~~~H~~~V~~i~~~~~--~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..|+|++++ ++++++|+.||+|++|| . +++.+.++.+|.++|++++|+|+ +++|+|+|.||+ |+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~---------I~ 80 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK---------VL 80 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC---------EE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe---------EE
Confidence 458888875 35799999999999999 4 45678899999999999999987 999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC--CCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
+||+... ...++..+. .+..+ |++++|+|+ +.. +++|+.||+|++|+..- ........+.
T Consensus 81 vwd~~~~--------~~~~~~~~~--~h~~~---V~~v~~sp~~~~~~---l~sgs~dg~I~vwdl~~--~~~~~~~~~~ 142 (753)
T 3jro_A 81 IWKEENG--------RWSQIAVHA--VHSAS---VNSVQWAPHEYGPL---LLVASSDGKVSVVEFKE--NGTTSPIIID 142 (753)
T ss_dssp EEEEETT--------EEEEEEEEC--CCSSC---EEEEEECCGGGCSE---EEEEETTSEEEEEECCS--SSCCCCEEEE
T ss_pred EEECCCC--------ccccccccc--CCCCC---eEEEEECCCCCCCE---EEEEeCCCcEEEEEeec--CCCcceeEee
Confidence 9999742 111333333 22334 999999999 899 99999999999998631 1111223344
Q ss_pred cCCCCcceEEEee-------------cCCeEEEEEEcCCeEEEEEecCCC---CcceEEccCCCccceecccCC---CeE
Q 037368 177 DNQCSVMGLGFRV-------------DGQALQLFAVTPNSVILFSLQNQP---PKRQFLDNIGCSTNSVAMSDR---LEL 237 (823)
Q Consensus 177 ~~~~~It~l~fs~-------------dg~~~~l~~~t~~~V~~~d~~~~~---~~~~~l~~~~~~~~~~~~s~~---~~l 237 (823)
.+.++|+++.|+| ++. .++..+.++.|++||+.... .+...+..|...+.+++|+|+ +.+
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE
Confidence 5678999999999 353 34444456679999997643 233456678889999999998 775
Q ss_pred E-Eee-CCeEEEEecCCCC-c----cccc---cCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 238 I-IGR-PEAVYFYEVDGRG-P----CWAF---EGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 238 i-v~~-~~~I~i~~~~g~~-~----~~~~---~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+ +++ ++.|++|++.... . .... .+....++| .+.++++++ .+++|+|||+.
T Consensus 222 l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s-----~Dg~I~vwd~~ 284 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG-----GDNKVTLWKEN 284 (753)
T ss_dssp EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC-----SSSCEECCBCC
T ss_pred EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc-----CCCEEEEEecC
Confidence 5 444 4689999987532 1 1122 222334444 567888776 45899999987
No 92
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.4e-18 Score=189.28 Aligned_cols=193 Identities=9% Similarity=0.104 Sum_probs=136.3
Q ss_pred eEEEeeCCCEEEEEecCCeEEEEcCC----------CeeeEeEe-ecccceeEEEEec--CCCEEEEEecCCCCcccccc
Q 037368 28 ITCCSSGRGKVVIGCDDGAVSLLDRG----------LKFNFGFQ-AHSSSVLFLQQLK--QRNFLVTVGEDEQVSAQQSA 94 (823)
Q Consensus 28 is~~~~~~~~l~~gs~dG~i~~~d~~----------~~~~~~~~-~H~~~V~~i~~~~--~~~~l~s~s~D~~~~~~~~~ 94 (823)
|.++.+++. +++|+.||+|++|+.. ++.++.+. +|.++|.+++++| ++++|+|+|.|++
T Consensus 79 v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~------- 150 (343)
T 3lrv_A 79 PRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT------- 150 (343)
T ss_dssp CCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC-------
T ss_pred ceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc-------
Confidence 333344444 8999999999999743 33344554 6778999999999 9999999999998
Q ss_pred eeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce-e
Q 037368 95 VCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF-K 173 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~-~ 173 (823)
|++||+... .++..... ... ..+++++|+|++.. +|+|+.||.|++|+.. .+... .
T Consensus 151 --i~~wd~~~~----------~~~~~~~~-~~~---~~i~~~~~~pdg~~---lasg~~dg~i~iwd~~----~~~~~~~ 207 (343)
T 3lrv_A 151 --IGFQSYEDD----------SQYIVHSA-KSD---VEYSSGVLHKDSLL---LALYSPDGILDVYNLS----SPDQASS 207 (343)
T ss_dssp --EEEEESSSS----------CEEEEECC-CSS---CCCCEEEECTTSCE---EEEECTTSCEEEEESS----CTTSCCE
T ss_pred --EEEEECCCC----------cEEEEEec-CCC---CceEEEEECCCCCE---EEEEcCCCEEEEEECC----CCCCCcc
Confidence 999999843 23333221 112 23999999999999 9999999999999863 12222 2
Q ss_pred EEec-CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEE---ccCCCccc--eecccCCCeEEEe--e-CCe
Q 037368 174 LQVD-NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFL---DNIGCSTN--SVAMSDRLELIIG--R-PEA 244 (823)
Q Consensus 174 ~~~~-~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l---~~~~~~~~--~~~~s~~~~liv~--~-~~~ 244 (823)
.+.. +.++|++++|+|+| ..|++++++.|++||++... ....+ ..+...+. +++|+|+|+++++ . ++.
T Consensus 208 ~~~~~h~~~v~~l~fs~~g--~~l~s~~~~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 208 RFPVDEEAKIKEVKFADNG--YWMVVECDQTVVCFDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS 284 (343)
T ss_dssp ECCCCTTSCEEEEEECTTS--SEEEEEESSBEEEEETTSST-TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE
T ss_pred EEeccCCCCEEEEEEeCCC--CEEEEEeCCeEEEEEcCCCC-cceeecccccccccccceEEEECCCCCEEEEecCCCCc
Confidence 3333 67899999999998 46777777799999997643 22222 22333333 6899999986654 4 679
Q ss_pred EEEEecCCCC
Q 037368 245 VYFYEVDGRG 254 (823)
Q Consensus 245 I~i~~~~g~~ 254 (823)
|++|+.+...
T Consensus 285 i~v~~~~~~~ 294 (343)
T 3lrv_A 285 LTIYKFDKKT 294 (343)
T ss_dssp EEEEEECTTT
T ss_pred EEEEEEcccc
Confidence 9999986443
No 93
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4.6e-18 Score=186.20 Aligned_cols=243 Identities=14% Similarity=0.157 Sum_probs=163.8
Q ss_pred CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCce
Q 037368 54 LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKI 133 (823)
Q Consensus 54 ~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 133 (823)
|+++..+++|.+.|++++|+|++++|+|++.|++ |+|||+... ...+++.+..+ ..+ |
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~---------i~iw~~~~~--------~~~~~~~~~~h--~~~---v 58 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKT---------IKIFEVEGE--------THKLIDTLTGH--EGP---V 58 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSC---------EEEEEEETT--------EEEEEEEECCC--SSC---E
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCc---------EEEEecCCC--------cceeeeEecCC--CCc---E
Confidence 4566789999999999999999999999999998 999999732 12344444422 344 9
Q ss_pred EEEEEecC--CCCcceEEEEEeCCeEEEEEccccccccc--ceeEEecCCCCcceEEEeec--CCeEEEEEEcCCeEEEE
Q 037368 134 TSFLVLEE--APPILLIAIGLDNGCIYCIKGDIARERIT--RFKLQVDNQCSVMGLGFRVD--GQALQLFAVTPNSVILF 207 (823)
Q Consensus 134 ~~va~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~--k~~~~~~~~~~It~l~fs~d--g~~~~l~~~t~~~V~~~ 207 (823)
++++|+|+ +.. +|+|+.||.|++|+.. .+. ....+..+..+|++++|+|+ +. .++.++.++.|++|
T Consensus 59 ~~~~~~~~~~~~~---l~s~~~dg~v~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~ 130 (379)
T 3jrp_A 59 WRVDWAHPKFGTI---LASCSYDGKVLIWKEE----NGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVV 130 (379)
T ss_dssp EEEEECCGGGCSE---EEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEE
T ss_pred EEEEeCCCCCCCE---EEEeccCCEEEEEEcC----CCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEE
Confidence 99999977 888 9999999999999863 111 22223346789999999998 63 34444456679999
Q ss_pred EecCCC-CcceEEccCCCccceecccC-------------CCe-EEEee-CCeEEEEecCCCCcc----ccccCC---eE
Q 037368 208 SLQNQP-PKRQFLDNIGCSTNSVAMSD-------------RLE-LIIGR-PEAVYFYEVDGRGPC----WAFEGE---KK 264 (823)
Q Consensus 208 d~~~~~-~~~~~l~~~~~~~~~~~~s~-------------~~~-liv~~-~~~I~i~~~~g~~~~----~~~~g~---~~ 264 (823)
|+.... .....+..|...+.+++|+| ++. +++++ ++.|++|+++..... ..+.+| ..
T Consensus 131 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 131 EFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 210 (379)
T ss_dssp ECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEe
Confidence 997653 23445567888899999998 465 45554 468999998743221 234444 44
Q ss_pred EEEee-----CcEEEEEEecCCCCccEEEEEeCCCC----EEE-Eec--cccceeEE-EeecCcEEEEEcCCeEEEEeec
Q 037368 265 LLGWF-----RGYLLCVIADQRNSKNIFNVYDLKNR----LIA-HSL--VVKEVSHM-LCEWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 265 ~i~~~-----~~ylv~~s~d~~~~~~~I~I~D~~~~----~i~-~~~--~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~ 331 (823)
.+.|. +.++++++ .+++|+|||+.+. ... ... .-..+..+ +++++..+++++.+..++++..
T Consensus 211 ~~~~sp~~~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVS-----QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp EEEECCCCSSSEEEEEEE-----TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred EEEECCCCCCCCeEEEEe-----CCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 56554 56777777 4589999999874 222 111 11224444 6777776666544434444433
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.80 E-value=4.7e-18 Score=191.45 Aligned_cols=230 Identities=13% Similarity=0.160 Sum_probs=165.1
Q ss_pred CCeEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 26 GNITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
..|+|+++.++.+++|+.||+|++|| .+++.+.++.+|...|.+++++ ++.++|+|.|++ |++||+..
T Consensus 174 ~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~---------i~vwd~~~ 242 (435)
T 1p22_A 174 GSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRS---------IAVWDMAS 242 (435)
T ss_dssp SCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSC---------EEEEECSS
T ss_pred CcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCc---------EEEEeCCC
Confidence 45899999888999999999999999 7789999999999999999995 569999999998 99999985
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcce
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
.. .......+. .+..+ |+++++ +++. +++|+.||.|++|+.. .+.....+..+.++|++
T Consensus 243 ~~-------~~~~~~~~~--~~~~~---v~~~~~--~~~~---l~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v~~ 301 (435)
T 1p22_A 243 PT-------DITLRRVLV--GHRAA---VNVVDF--DDKY---IVSASGDRTIKVWNTS----TCEFVRTLNGHKRGIAC 301 (435)
T ss_dssp SS-------CCEEEEEEC--CCSSC---EEEEEE--ETTE---EEEEETTSEEEEEETT----TCCEEEEEECCSSCEEE
T ss_pred CC-------CceeeeEec--CCCCc---EEEEEe--CCCE---EEEEeCCCeEEEEECC----cCcEEEEEcCCCCcEEE
Confidence 32 111112322 22334 999999 5568 9999999999999863 22233344556789999
Q ss_pred EEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCC---------
Q 037368 185 LGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRG--------- 254 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~--------- 254 (823)
+.|++ + .++..+.++.|++||+... .....+..|...+.|+++ .+..+++|+ ++.|++|++....
T Consensus 302 ~~~~~--~-~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 302 LQYRD--R-LVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp EEEET--T-EEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred EEeCC--C-EEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 99853 2 3444445667999999754 356677788888999888 334455555 4689999975221
Q ss_pred ccccccCC---eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 255 PCWAFEGE---KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 255 ~~~~~~g~---~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
....+.+| ...+.+.+.++++++ .+++|+|||+.+...
T Consensus 377 ~~~~~~~h~~~v~~l~~~~~~l~s~s-----~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQFDEFQIVSSS-----HDDTILIWDFLNDPA 417 (435)
T ss_dssp EEEEECCCSSCCCCEEECSSCEEECC-----SSSEEEEEC------
T ss_pred heeeccCCCCCeEEEEeCCCEEEEEe-----CCCEEEEEECCCCCC
Confidence 11234444 456778888888776 468999999977543
No 95
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.80 E-value=2.7e-18 Score=188.99 Aligned_cols=195 Identities=11% Similarity=0.109 Sum_probs=137.2
Q ss_pred eEEEee-CC-CEEEEE--ecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 28 ITCCSS-GR-GKVVIG--CDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 28 is~~~~-~~-~~l~~g--s~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
+.++++ ++ .++++| +.||+|++|| .+++++..+. |.+.|.+++|+|+|++|+++++|+ +++|+.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~----------~~~~~~ 204 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS----------LEVIST 204 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC----------EEEEET
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee----------EEEEEe
Confidence 545554 44 455554 4789999999 7788887775 778999999999999999999776 667766
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC----eEEEEEcccccccccceeEEecC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG----CIYCIKGDIARERITRFKLQVDN 178 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG----~V~l~~~~~~~~~~~k~~~~~~~ 178 (823)
... . ++.......+. ..|++++|+||+.. +++|+.++ .+.+|+.........+...+..+
T Consensus 205 ~~~--------~--~~~~~~~~~~~---~~v~~v~fspdg~~---l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 268 (365)
T 4h5i_A 205 VTG--------S--CIARKTDFDKN---WSLSKINFIADDTV---LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR 268 (365)
T ss_dssp TTC--------C--EEEEECCCCTT---EEEEEEEEEETTEE---EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS
T ss_pred ccC--------c--ceeeeecCCCC---CCEEEEEEcCCCCE---EEEEecCCcceeEEeecccccceecceeeeeecCC
Confidence 532 1 22221111112 33999999999999 99999887 46667643100001112234456
Q ss_pred CCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceE-EccCCCccceecccCCCeEEE-ee-CCeEEEEecCC
Q 037368 179 QCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQF-LDNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDG 252 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~-l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g 252 (823)
..+|++++|+|+|+ .|++++ ++.|++||+.+.. +... +.+|...+.+++|+|||++++ |+ |++|++|++..
T Consensus 269 ~~~V~~~~~Spdg~--~lasgs~D~~V~iwd~~~~~-~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 269 FKGITSMDVDMKGE--LAVLASNDNSIALVKLKDLS-MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CSCEEEEEECTTSC--EEEEEETTSCEEEEETTTTE-EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCeEeEEECCCCC--ceEEEcCCCEEEEEECCCCc-EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 78999999999994 566665 5569999997643 3444 568999999999999998665 44 46999999853
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.8e-17 Score=176.50 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=167.2
Q ss_pred CCCeEEEeeC--CCEEEEEecCCeEEEEc-C---CCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 25 SGNITCCSSG--RGKVVIGCDDGAVSLLD-R---GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 25 ~~~is~~~~~--~~~l~~gs~dG~i~~~d-~---~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...|+++++. +..+++|+.||.|++|+ . .++.+..+.+|...|.++.+ ++++|++++.|++ |+
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~---------i~ 127 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT---------AK 127 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE---------EE
T ss_pred CccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC---------EE
Confidence 4457777764 46899999999999998 2 34667789999999999999 5789999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccccccceeEEec
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+||.. .....+..+ ..+ +.+++++| ++.. +++|+.||.|++|+.. .....+..
T Consensus 128 ~~d~~------------~~~~~~~~~--~~~---v~~~~~~~~~~~~---l~~~~~d~~i~i~d~~------~~~~~~~~ 181 (313)
T 3odt_A 128 VWKEG------------SLVYNLQAH--NAS---VWDAKVVSFSENK---FLTASADKTIKLWQND------KVIKTFSG 181 (313)
T ss_dssp EEETT------------EEEEEEECC--SSC---EEEEEEEETTTTE---EEEEETTSCEEEEETT------EEEEEECS
T ss_pred EEcCC------------cEEEecccC--CCc---eeEEEEccCCCCE---EEEEECCCCEEEEecC------ceEEEEec
Confidence 99932 134444432 334 99999988 8888 9999999999999832 12233333
Q ss_pred -CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCc
Q 037368 178 -NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGP 255 (823)
Q Consensus 178 -~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~ 255 (823)
+..+|++++|++++ .++..+.++.|++||+... .+...+..|...+.+++|+|++++++++ ++.|++|+++....
T Consensus 182 ~~~~~i~~~~~~~~~--~~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 182 IHNDVVRHLAVVDDG--HFISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp SCSSCEEEEEEEETT--EEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCE
T ss_pred cCcccEEEEEEcCCC--eEEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCce
Confidence 57899999999998 4455555667999999754 3566677788889999999999888765 46899999874333
Q ss_pred cccccCC---eEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCE
Q 037368 256 CWAFEGE---KKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 256 ~~~~~g~---~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
...+.++ ...+.|..+ .+++++ .+++|++||+.++.
T Consensus 259 ~~~~~~~~~~i~~~~~~~~~~~~~~~-----~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 259 KQVITLPAISIWSVDCMSNGDIIVGS-----SDNLVRIFSQEKSR 298 (313)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEE-----TTSCEEEEESCGGG
T ss_pred eEEEeccCceEEEEEEccCCCEEEEe-----CCCcEEEEeCCCCc
Confidence 3334433 445665432 344555 46899999997643
No 97
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.6e-17 Score=181.03 Aligned_cols=244 Identities=12% Similarity=0.110 Sum_probs=171.9
Q ss_pred CCCeEEEeeC--CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecC-----CCCccccccee
Q 037368 25 SGNITCCSSG--RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGED-----EQVSAQQSAVC 96 (823)
Q Consensus 25 ~~~is~~~~~--~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D-----~~~~~~~~~~~ 96 (823)
...|+|++.. +.+|++|+.||.|++|| .+++.+..+. |...|.+++|+|++++|++++.| ++
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~--------- 143 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS--------- 143 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE---------
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE---------
Confidence 3458887765 45899999999999999 7788887887 88999999999999999999998 76
Q ss_pred EEEEeCCCCCCCCCC-CCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE
Q 037368 97 LKVFDLDKMEPEGTS-STSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ 175 (823)
Q Consensus 97 vkvWdl~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~ 175 (823)
|++||+......... ......+..+..+... ..+++++|+|+++. +++|+.||.|.+|+.. ........+
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---l~~~~~dg~i~i~d~~---~~~~~~~~~ 214 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGL---DAATVAGWSTKGKY---IIAGHKDGKISKYDVS---NNYEYVDSI 214 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTC---CCEEEEEECGGGCE---EEEEETTSEEEEEETT---TTTEEEEEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCc---cceeEEEEcCCCCE---EEEEcCCCEEEEEECC---CCcEeEEEE
Confidence 999999854210000 0000012222222111 14999999999999 9999999999999863 112223334
Q ss_pred ecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-eeC-C---------
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRP-E--------- 243 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~-~--------- 243 (823)
..+.++|++++|+++++ .++++ .++.|++||+.... ....+. +...+.+++|+|++.+++ +.. +
T Consensus 215 ~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 290 (369)
T 3zwl_B 215 DLHEKSISDMQFSPDLT--YFITSSRDTNSFLVDVSTLQ-VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSA 290 (369)
T ss_dssp ECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCC-EEEEEE-CSSCEEEEEECSSSSEEEEEECCC---------
T ss_pred ecCCCceeEEEECCCCC--EEEEecCCceEEEEECCCCc-eeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEec
Confidence 45678999999999984 44444 56679999997643 444454 566788899999888654 433 3
Q ss_pred -----eEEEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 244 -----AVYFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 244 -----~I~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
.+++|+.........+.++ ...+.| .+.++++++ .+++|+|||+..+.
T Consensus 291 ~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 291 NEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG-----EDGFIRLHHFEKSY 348 (369)
T ss_dssp ----CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE-----TTSEEEEEEECHHH
T ss_pred CCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc-----CCCeEEEEECcccc
Confidence 6888988644333344444 445555 567888887 45899999987643
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=7.8e-18 Score=193.75 Aligned_cols=193 Identities=12% Similarity=0.067 Sum_probs=141.3
Q ss_pred CCeEEEeeCC--------CEEEEEecCCeEEEEc-CCCe-----------eeEeEeecccceeEEEEecCCCEEEEEecC
Q 037368 26 GNITCCSSGR--------GKVVIGCDDGAVSLLD-RGLK-----------FNFGFQAHSSSVLFLQQLKQRNFLVTVGED 85 (823)
Q Consensus 26 ~~is~~~~~~--------~~l~~gs~dG~i~~~d-~~~~-----------~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D 85 (823)
..|.++++++ +.||+|+.||+|++|| .++. +..++.+|.+.|++++|+++ +.|+|+|.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCC
Confidence 3476666543 4899999999999999 4332 23478899999999999985 589999999
Q ss_pred CCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEE--EEecCC-CCcceEEEEEeCCeEEEEEc
Q 037368 86 EQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSF--LVLEEA-PPILLIAIGLDNGCIYCIKG 162 (823)
Q Consensus 86 ~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~v--a~~~d~-~~~~~ia~G~~dG~V~l~~~ 162 (823)
|+ |++||+.... . +..++..+ ..+ |++| +++|++ .. +|+|+.||+|++|+.
T Consensus 287 gt---------V~lWD~~~~~-------~--~~~~~~~H--~~~---V~sv~~~~s~~g~~~---laS~S~D~tvklWD~ 340 (524)
T 2j04_B 287 GF---------VAEFDLTDPE-------V--PSFYDQVH--DSY---ILSVSTAYSDFEDTV---VSTVAVDGYFYIFNP 340 (524)
T ss_dssp SE---------EEEEETTBCS-------S--CSEEEECS--SSC---EEEEEEECCTTSCCE---EEEEETTSEEEEECG
T ss_pred CE---------EEEEECCCCC-------C--ceEEeecc--ccc---EEEEEEEcCCCCCeE---EEEeccCCeEEEEEC
Confidence 98 9999998421 1 23344433 334 9999 578887 78 999999999999986
Q ss_pred ccccccccceeEEecC--CCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-
Q 037368 163 DIARERITRFKLQVDN--QCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI- 238 (823)
Q Consensus 163 ~~~~~~~~k~~~~~~~--~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li- 238 (823)
. + +.....+..+ ...|++++|+|+++ .++++ .++.|++||+... .....+.+|...+.+++|+|+|.++
T Consensus 341 ~---~-~~~~~~~~~~~~~~~v~~v~fsp~~~--~l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 341 K---D-IATTKTTVSRFRGSNLVPVVYCPQIY--SYIYSDGASSLRAVPSRAA-FAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp G---G-HHHHCEEEEECSCCSCCCEEEETTTT--EEEEECSSSEEEEEETTCT-TCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred C---C-CCcccccccccccCcccceEeCCCcC--eEEEeCCCCcEEEEECccc-ccceeeecCCCceEEEEeCCCCCeEE
Confidence 2 1 1112222222 24689999999985 34444 4557999998753 3446677788899999999999754
Q ss_pred Eee-CCeEEEEecCC
Q 037368 239 IGR-PEAVYFYEVDG 252 (823)
Q Consensus 239 v~~-~~~I~i~~~~g 252 (823)
+|+ |++|++|++.+
T Consensus 414 Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 414 AGSADGSLIITNAAR 428 (524)
T ss_dssp EEETTTEEECCBSCS
T ss_pred EEECCCEEEEEechH
Confidence 454 46999999864
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.79 E-value=1.5e-17 Score=202.31 Aligned_cols=238 Identities=12% Similarity=0.118 Sum_probs=171.8
Q ss_pred CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCce
Q 037368 54 LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKI 133 (823)
Q Consensus 54 ~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v 133 (823)
.+..++|++|++.|++++|+|+|++|++++.||+ |+|||+.. +.+++++..+ ..+ |
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~---------v~iwd~~~----------~~~~~~~~~~--~~~---v 58 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGR---------VEIWNYET----------QVEVRSIQVT--ETP---V 58 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSE---------EEEEETTT----------TEEEEEEECC--SSC---E
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCE---------EEEEECCC----------CceEEEEecC--CCc---E
Confidence 3456789999999999999999999999999998 99999974 2355666533 344 9
Q ss_pred EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCC
Q 037368 134 TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQ 212 (823)
Q Consensus 134 ~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~ 212 (823)
++++|+|+++. +|+|+.||.|++|+.. .+.....+..+.++|++++|+|+|+ .+++++ ++.|++|++.+.
T Consensus 59 ~~~~~s~~~~~---l~~~~~dg~i~vw~~~----~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 59 RAGKFIARKNW---IIVGSDDFRIRVFNYN----TGEKVVDFEAHPDYIRSIAVHPTKP--YVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp EEEEEEGGGTE---EEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECSSSS--EEEEEETTSEEEEEEGGGT
T ss_pred EEEEEeCCCCE---EEEEeCCCeEEEEECC----CCcEEEEEecCCCCEEEEEEeCCCC--EEEEEcCCCEEEEEECCCC
Confidence 99999999999 9999999999999863 2233344455688999999999985 455554 567999999865
Q ss_pred CCcceEEccCCCccceecccC-CCe-EEEee-CCeEEEEecCCCCccccccC----CeEEEEe----eCcEEEEEEecCC
Q 037368 213 PPKRQFLDNIGCSTNSVAMSD-RLE-LIIGR-PEAVYFYEVDGRGPCWAFEG----EKKLLGW----FRGYLLCVIADQR 281 (823)
Q Consensus 213 ~~~~~~l~~~~~~~~~~~~s~-~~~-liv~~-~~~I~i~~~~g~~~~~~~~g----~~~~i~~----~~~ylv~~s~d~~ 281 (823)
......+..|...+.|++|+| ++. +++++ ++.|++|++.+......+.+ ....+.| .+.++++++
T Consensus 130 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~---- 205 (814)
T 3mkq_A 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---- 205 (814)
T ss_dssp SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC----
T ss_pred ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe----
Confidence 445566777888899999999 775 44554 46899999875443333322 2344555 466887776
Q ss_pred CCccEEEEEeCCCCEEEE--eccccceeEE-EeecCcEEEEEcCCeEEEEe
Q 037368 282 NSKNIFNVYDLKNRLIAH--SLVVKEVSHM-LCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 282 ~~~~~I~I~D~~~~~i~~--~~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~ 329 (823)
.+++|++||+.++.... ..+...+..+ +++.+.++++++.+..++++
T Consensus 206 -~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 206 -DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred -CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45899999998765443 2333335444 66677766665543334444
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.79 E-value=1.5e-17 Score=212.33 Aligned_cols=230 Identities=16% Similarity=0.185 Sum_probs=174.2
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEec--CCCEEEEEecCCCCcccccceeEEEE
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLK--QRNFLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~--~~~~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
..|+|+++++ .++++|+.||+|++|| .+++.+.++.+|.+.|++++|+| ++.+++|+|.|++ |++|
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~---------v~vw 728 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF---------LKLW 728 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC---------EEEE
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe---------EEEE
Confidence 4587777643 5899999999999999 78899999999999999999999 5568999999998 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe----
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV---- 176 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~---- 176 (823)
|+... .++.++..+ ..+ |++++|+|++.. +|+|+.||+|++|+..- +.....+.
T Consensus 729 d~~~~----------~~~~~~~~h--~~~---v~~~~~sp~~~~---l~s~s~dg~v~vwd~~~----~~~~~~~~~~~~ 786 (1249)
T 3sfz_A 729 DLNQK----------ECRNTMFGH--TNS---VNHCRFSPDDEL---LASCSADGTLRLWDVRS----ANERKSINVKRF 786 (1249)
T ss_dssp ETTSS----------SEEEEECCC--SSC---EEEEEECSSTTE---EEEEESSSEEEEEEGGG----TEEEEEEECCCC
T ss_pred ECCCc----------chhheecCC--CCC---EEEEEEecCCCE---EEEEECCCeEEEEeCCC----Ccccceeccccc
Confidence 99842 356665533 334 999999999999 99999999999998631 11111110
Q ss_pred ---------cCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-CCeE
Q 037368 177 ---------DNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAV 245 (823)
Q Consensus 177 ---------~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I 245 (823)
.....|++++|+++| ..+++++++.|.+|++............|...+.+++|+|++.+++ +. ++.|
T Consensus 787 ~~~~~~~~~~~~~~v~~~~~s~dg--~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v 864 (1249)
T 3sfz_A 787 FLSSEDPPEDVEVIVKCCSWSADG--DKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCV 864 (1249)
T ss_dssp C--------CCCCCBCCCCBCTTS--SEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCE
T ss_pred ccccCCccccccceEEEEEECCCC--CEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeE
Confidence 113479999999999 4677777889999999765433333346778899999999888654 43 4589
Q ss_pred EEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 246 YFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 246 ~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
++|+.........+.+| ...+.| .+.++++++ .+++|++||+.
T Consensus 865 ~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s-----~dg~v~vw~~~ 912 (1249)
T 3sfz_A 865 ELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS-----DDQTIRVWETK 912 (1249)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-----TTSCEEEEEHH
T ss_pred EEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe-----CCCeEEEEEcc
Confidence 99998854333445555 345555 467888887 45899999964
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.79 E-value=2.4e-17 Score=184.85 Aligned_cols=233 Identities=12% Similarity=0.088 Sum_probs=170.6
Q ss_pred CCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 26 GNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 26 ~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..|+|+++++ .+|++|+.||+|++|| .+++.++++.+|...|.++++ ++.+|+|++.|++ +++||.
T Consensus 148 ~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~---------i~~~d~ 216 (420)
T 4gga_A 148 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGH---------IHHHDV 216 (420)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE---------EEEEET
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCc---------eeEeee
Confidence 3488888753 5899999999999999 789999999999999999887 4689999999998 999998
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
.... ..+.++..+ ..+ +.++.++|++.. +++|+.||.|.+|+..-.............+.++|
T Consensus 217 ~~~~---------~~~~~~~~h--~~~---~~~~~~~~~g~~---l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 217 RVAE---------HHVATLSGH--SQE---VCGLRWAPDGRH---LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp TSSS---------CEEEEEECC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred cccc---------eeeEEeccc--ccc---eeeeeecCCCCe---eeeeeccccceEEeeccccccceeeeeecccCCce
Confidence 7432 245555533 233 999999999999 99999999999998632111111223334567899
Q ss_pred ceEEEeecCCeEEEEEEc---CCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEee---CCeEEEEecCCCCc
Q 037368 183 MGLGFRVDGQALQLFAVT---PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIGR---PEAVYFYEVDGRGP 255 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~t---~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~~---~~~I~i~~~~g~~~ 255 (823)
.+++|+|++. .++++++ ++.|++||+.+.. ....+. .+..+.++.|+|++. ++++. ++.|++|+......
T Consensus 280 ~~~~~~p~~~-~~la~~~gs~D~~I~iwd~~t~~-~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 280 KAVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGA-CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp EEEEECTTCT-TEEEEEECTTTCEEEEEETTTTE-EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred eeeeeCCCcc-cEEEEEeecCCCEEEEEeCCccc-cceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 9999999875 3454432 4579999997543 344444 345567778888765 44443 46899999874444
Q ss_pred cccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 256 CWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 256 ~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...+.|| ...++| ++.+|++++ .|++|+|||+..
T Consensus 357 v~~l~gH~~~V~~l~~spdg~~l~S~s-----~D~tvriWdv~~ 395 (420)
T 4gga_A 357 VAELKGHTSRVLSLTMSPDGATVASAA-----ADETLRLWRCFE 395 (420)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEE-----TTTEEEEECCSC
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEe-----cCCeEEEEECCC
Confidence 4567776 345555 577898887 468999999864
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.78 E-value=4.6e-18 Score=187.14 Aligned_cols=229 Identities=10% Similarity=0.083 Sum_probs=152.6
Q ss_pred CCeEEEeeCCCEEEEEe-----------cCCeEEEEc--CCCeeeEeEe--------ecccceeEEEEecCCCEEEEE--
Q 037368 26 GNITCCSSGRGKVVIGC-----------DDGAVSLLD--RGLKFNFGFQ--------AHSSSVLFLQQLKQRNFLVTV-- 82 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs-----------~dG~i~~~d--~~~~~~~~~~--------~H~~~V~~i~~~~~~~~l~s~-- 82 (823)
..+.|+++.++.+++|. .|+++++|+ .....+.... .+...|..++|+|+|++|+++
T Consensus 74 ~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~ 153 (365)
T 4h5i_A 74 DSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS 153 (365)
T ss_dssp CCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES
T ss_pred CceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC
Confidence 34778887777777764 567888887 2222221111 233458899999999998654
Q ss_pred ecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEc
Q 037368 83 GEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKG 162 (823)
Q Consensus 83 s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~ 162 (823)
+.|++ |+|||+... .++.++. + ..+ |++|+|+||++. +|+|+.+ .+.+|..
T Consensus 154 ~~d~~---------i~iwd~~~~----------~~~~~~~-~--~~~---V~~v~fspdg~~---l~s~s~~-~~~~~~~ 204 (365)
T 4h5i_A 154 KVPAI---------MRIIDPSDL----------TEKFEIE-T--RGE---VKDLHFSTDGKV---VAYITGS-SLEVIST 204 (365)
T ss_dssp CSSCE---------EEEEETTTT----------EEEEEEE-C--SSC---CCEEEECTTSSE---EEEECSS-CEEEEET
T ss_pred CCCCE---------EEEeECCCC----------cEEEEeC-C--CCc---eEEEEEccCCce---EEeccce-eEEEEEe
Confidence 47887 999999842 3555554 1 233 999999999999 9999854 5555543
Q ss_pred cccccccccee--EEecCCCCcceEEEeecCCeEEEEEEc-CC----eEEEEEecCCCC---cceEEccCCCccceeccc
Q 037368 163 DIARERITRFK--LQVDNQCSVMGLGFRVDGQALQLFAVT-PN----SVILFSLQNQPP---KRQFLDNIGCSTNSVAMS 232 (823)
Q Consensus 163 ~~~~~~~~k~~--~~~~~~~~It~l~fs~dg~~~~l~~~t-~~----~V~~~d~~~~~~---~~~~l~~~~~~~~~~~~s 232 (823)
. .+.... ....+..+|++++|+|+| ..+++++ ++ .++.|++..... ....+.+|...+.|++|+
T Consensus 205 ~----~~~~~~~~~~~~~~~~v~~v~fspdg--~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~S 278 (365)
T 4h5i_A 205 V----TGSCIARKTDFDKNWSLSKINFIADD--TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVD 278 (365)
T ss_dssp T----TCCEEEEECCCCTTEEEEEEEEEETT--EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEEC
T ss_pred c----cCcceeeeecCCCCCCEEEEEEcCCC--CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEEC
Confidence 1 121111 122346789999999999 4555554 33 377888764321 123455777889999999
Q ss_pred CCCeEEE-eeC-CeEEEEecCCCCcccc-ccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 233 DRLELII-GRP-EAVYFYEVDGRGPCWA-FEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 233 ~~~~liv-~~~-~~I~i~~~~g~~~~~~-~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
|+|++++ |+. ++|++|+++....... +.|| ...++| ++.+|++++. |++|+|||+..
T Consensus 279 pdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~-----D~tvrvw~ip~ 343 (365)
T 4h5i_A 279 MKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA-----ANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET-----TSEEEEEECCT
T ss_pred CCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC-----CCeEEEEEcCC
Confidence 9998664 544 5899999874332233 3566 345555 6789999884 58999999854
No 103
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=99.78 E-value=1.7e-15 Score=162.05 Aligned_cols=343 Identities=16% Similarity=0.155 Sum_probs=243.2
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecC
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQN 211 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~ 211 (823)
.-+.-.+|.... +|.-. +.++.+++.+. |.++- +.-.++|.-=.|-.+ ..|..+|++.|+.|++.+
T Consensus 68 AdsAIMnP~~~i---iALra-g~~lQiFnle~------K~klks~~~~e~VvfWkWis~---~~l~lVT~taVyHWsi~~ 134 (494)
T 1bpo_A 68 ADSAIMNPASKV---IALKA-GKTLQIFNIEM------KSKMKAHTMTDDVTFWKWISL---NTVALVTDNAVYHWSMEG 134 (494)
T ss_dssp CSEEEECSSSSC---EEEEE-TTEEEEEETTT------TEEEEEEECSSCCCEEEEEET---TEEEEECSSEEEEEESSS
T ss_pred cceeeeCCCCcE---EEEec-CCeEEEEchHH------hhhhcceecCCCceEEEecCC---CeEEEEcCCeeEEecccC
Confidence 445556888877 88765 77899998752 33321 233567887555444 378899999999999988
Q ss_pred CCCcceEEccCCCccceec----ccCCCe-EE-Eee-------CCeEEEEecCCCCccccccCCeEEEE-----------
Q 037368 212 QPPKRQFLDNIGCSTNSVA----MSDRLE-LI-IGR-------PEAVYFYEVDGRGPCWAFEGEKKLLG----------- 267 (823)
Q Consensus 212 ~~~~~~~l~~~~~~~~~~~----~s~~~~-li-v~~-------~~~I~i~~~~g~~~~~~~~g~~~~i~----------- 267 (823)
...|.++++.|+.--+|-. .+++.+ ++ +|- .+.+.+|+++ ++.+..+|||...++
T Consensus 135 ~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 135 ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEE
T ss_pred CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCc
Confidence 6678899987765444422 235555 33 231 1568899987 444455555522111
Q ss_pred ---e---e---Cc--EEEEEEec--CC------------------------------------CCccEEEEEeCCCCEEE
Q 037368 268 ---W---F---RG--YLLCVIAD--QR------------------------------------NSKNIFNVYDLKNRLIA 298 (823)
Q Consensus 268 ---~---~---~~--ylv~~s~d--~~------------------------------------~~~~~I~I~D~~~~~i~ 298 (823)
+ - |. +++-+..+ +. +..|.|.+||+++....
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 1 0 11 23332211 00 15688999999999999
Q ss_pred Eeccccc-eeEE---EeecCcEEEEEcCCeEEEEeecChHHHHHHHHHh-ccHHHHHHHHHhcCCCHHHHHHHHHHHhhh
Q 037368 299 HSLVVKE-VSHM---LCEWGNIILVMTDKSVLCIGEKDMESKLDMLFKK-NLYTVAINLVQSQQADAAATAEVLRKYGDH 373 (823)
Q Consensus 299 ~~~~i~~-v~~v---~~~~~~~~vvs~~~~v~~l~~~~~~~~i~~L~~~-~~f~~Al~la~~~~~~~~~~~~I~~~y~d~ 373 (823)
|..+++. ..++ ....++++.+.+.|+|+.+. .+.+..+..+..+ ++-++|+++|.+.++|. .++++.+..+.
T Consensus 294 ~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~-v~e~~ivpyi~~~l~n~~lA~~lA~R~~LpG--Ad~L~~~~F~~ 370 (494)
T 1bpo_A 294 YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC-VEEENIIPYITNVLQNPDLALRMAVRNNLAG--AEELFARKFNA 370 (494)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEE-ECTTTHHHHHHHTTCCHHHHHHHHHHTTCSS--CHHHHHHHHHH
T ss_pred eeecccCCceEEecccCCCCcEEEEccCceEEEEE-EccccchhhhhhccCCHHHHHHHHHhcCCcc--HHHHHHHHHHH
Confidence 9888876 4444 23467899999999998886 6777778887764 78899999999999987 35668888999
Q ss_pred hccCCCHHHHHHHHHHH-hCCcChHHHHHHhhc----hhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhhHHH
Q 037368 374 LYSKQDYDEAMSQYILT-IGHLEPSYVIQKFLD----AQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNM 448 (823)
Q Consensus 374 L~~k~~y~~A~~~y~~t-i~~~eps~vI~kFl~----~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~ 448 (823)
||.+|+|++||+..+.+ -|.++..++|.||.. +++..+|..|+..|.+++..|+..+..|.+|....++.+.|++
T Consensus 371 l~~~g~y~~AA~~aA~sP~giLRt~~Ti~rFk~vp~~pgq~splL~YF~~Ll~~g~Ln~~ESlEl~r~vL~q~r~~llek 450 (494)
T 1bpo_A 371 LFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEK 450 (494)
T ss_dssp HHHTTCHHHHHHHHHHSGGGSSCSHHHHHHHTTSCCCTTSCCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHhCccccccCHHHHHHHhcCCCCCCCCCHHHHHHHHHhccCccchHHhhHHhHHHHhccHHHHHHH
Confidence 99999999999999988 567898999999986 4567899999999999999999999999999999999999999
Q ss_pred hhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHHHHH
Q 037368 449 FIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLE 498 (823)
Q Consensus 449 fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~il~~ 498 (823)
|+++.+ +.|. |+.=++++.+ ...-|+..+.+-+-|.+++..|.|
T Consensus 451 Wl~e~K----L~~S-EeLGDlvk~~-d~~LAl~IY~~a~~~~Kvi~cl~e 494 (494)
T 1bpo_A 451 WLKEDK----LECS-EELGDLVKSV-DPTLALSVYLRANVPNKVIQCFAE 494 (494)
T ss_dssp HHHHTC----SCCC-HHHHHHHHHH-CSHHHHHHHHHHCCCCC-------
T ss_pred HHhcCC----cccc-HHhHhhhhhc-CHHHHHHHHHHcCCcHHHHHHhhC
Confidence 999987 2232 3333444443 345677777777788888777653
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.2e-17 Score=202.86 Aligned_cols=264 Identities=11% Similarity=0.034 Sum_probs=166.7
Q ss_pred CEEEEEecCCeEEEEc-CCCeee--EeEe---------ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 36 GKVVIGCDDGAVSLLD-RGLKFN--FGFQ---------AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d-~~~~~~--~~~~---------~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|++|+.||+|++|| .++... +.|. +|...|++|+|+|+|++||+++.|++ |+||++.
T Consensus 448 ~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt---------V~lwd~~ 518 (902)
T 2oaj_A 448 TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD---------VVLFKYE 518 (902)
T ss_dssp EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC---------EEEEEEE
T ss_pred cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE---------EEEEEec
Confidence 4789999999999999 444321 1232 79999999999999999999999998 9999997
Q ss_pred CCCCCCC-------C-----------C-----------CC------CceEEEEEeccCCCCCCceEEEEEecCCCCcceE
Q 037368 104 KMEPEGT-------S-----------S-----------TS------PDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI 148 (823)
Q Consensus 104 ~~~~~~~-------~-----------~-----------~~------~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i 148 (823)
.....+. . . .. .+|+.++..+ ..+ |++++|+||| . +
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h--~~~---V~svafSpdG-~---l 589 (902)
T 2oaj_A 519 VNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN--KGK---TSAINNSNIG-F---V 589 (902)
T ss_dssp ECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC--SCS---EEEEEECBTS-E---E
T ss_pred CccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcC--CCc---EEEEEecCCc-E---E
Confidence 5310000 0 0 00 0234444422 334 9999999999 9 9
Q ss_pred EEEEeCCeEEEEEccccccccccee------EEe-cCCCCcceEEEe-----ecCC-eEEEEEEc-CCeEEEEEe---cC
Q 037368 149 AIGLDNGCIYCIKGDIARERITRFK------LQV-DNQCSVMGLGFR-----VDGQ-ALQLFAVT-PNSVILFSL---QN 211 (823)
Q Consensus 149 a~G~~dG~V~l~~~~~~~~~~~k~~------~~~-~~~~~It~l~fs-----~dg~-~~~l~~~t-~~~V~~~d~---~~ 211 (823)
|+|+.||+|++|+.. +.... .+. .+.+.|++|+|+ +||. ...|++++ ++.|++|++ .+
T Consensus 590 Asgs~D~tv~lwd~~-----~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 590 GIAYAAGSLMLIDRR-----GPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp EEEETTSEEEEEETT-----TTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred EEEeCCCcEEEEECC-----CCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC
Confidence 999999999999853 11110 111 456789999999 8862 13566555 557999998 22
Q ss_pred CCCcceEEccC-----CCccceec-cc----------------------CCCeEEEeeCCeEEEEecCCCCccc-cccCC
Q 037368 212 QPPKRQFLDNI-----GCSTNSVA-MS----------------------DRLELIIGRPEAVYFYEVDGRGPCW-AFEGE 262 (823)
Q Consensus 212 ~~~~~~~l~~~-----~~~~~~~~-~s----------------------~~~~liv~~~~~I~i~~~~g~~~~~-~~~g~ 262 (823)
+.....+.+| ..++..++ |+ +++.+++++++.|++|++.. +.+. ..-++
T Consensus 665 -g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~-~k~~~k~~~~ 742 (902)
T 2oaj_A 665 -GKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGK-SKSTHKGFKY 742 (902)
T ss_dssp -GCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTC-CCEEEEECSS
T ss_pred -CcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCcc-ccceeeEccc
Confidence 2233333222 23333222 22 57888888889999999863 3331 22222
Q ss_pred e---EEE---E--------eeCcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccc---e----eEEEeecCcEEEEEc
Q 037368 263 K---KLL---G--------WFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKE---V----SHMLCEWGNIILVMT 321 (823)
Q Consensus 263 ~---~~i---~--------~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~---v----~~v~~~~~~~~vvs~ 321 (823)
. ..+ . ..+..|++++ .+++|++|++.+-....+..++. + ...+...|.+++..+
T Consensus 743 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~~-----~~g~i~~~s~p~l~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 817 (902)
T 2oaj_A 743 PLAATGLSYISTVEKNNDRKNLTVIITLE-----INGHLRVFTIPDFKEQMSEHIPFPIAAKYITESSVLRNGDIAIRVS 817 (902)
T ss_dssp CEEEEEEEEEEEECSSSCEEEEEEEEEEE-----TTSEEEEEETTTCCEEEEEECSSCCCHHHHTTCEECTTSCEEEECS
T ss_pred ceeeeEEEEEEeccccccccCceEEEEEe-----CCCcEEEEECcchHHHhhccCCcccccccccceEEcCCCCEEEEeC
Confidence 1 122 2 2345666666 56999999986643333333222 1 124666777777666
Q ss_pred CCeEEEEe
Q 037368 322 DKSVLCIG 329 (823)
Q Consensus 322 ~~~v~~l~ 329 (823)
+..+.++.
T Consensus 818 ~~e~~~~~ 825 (902)
T 2oaj_A 818 EFQASLFS 825 (902)
T ss_dssp SSEEEEEE
T ss_pred hhheEEEE
Confidence 66555554
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.77 E-value=2.3e-17 Score=185.65 Aligned_cols=200 Identities=11% Similarity=0.092 Sum_probs=138.7
Q ss_pred CCeEEEeeCC----CEEEEEecCCeEEEEc-CCCee---------------------------------------eEeE-
Q 037368 26 GNITCCSSGR----GKVVIGCDDGAVSLLD-RGLKF---------------------------------------NFGF- 60 (823)
Q Consensus 26 ~~is~~~~~~----~~l~~gs~dG~i~~~d-~~~~~---------------------------------------~~~~- 60 (823)
..|+++++.+ ..+++|+.||+|++|+ .+++. .+.+
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 4587777643 4799999999999999 33222 1233
Q ss_pred eecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEe-----ccCCCCCCceEE
Q 037368 61 QAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRV-----FTSQFPEAKITS 135 (823)
Q Consensus 61 ~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~~v~~ 135 (823)
.+|...|++++|+|++++|+|+ .|++ |+|||+.... .+++.+.. ..+. ..|++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~---------i~iwd~~~~~---------~~~~~~~~~~~~~~~~~---~~v~~ 231 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLR---------INLWHLEITD---------RSFNIVDIKPANMEELT---EVITA 231 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSE---------EEEEETTEEE---------EEEEEEECCCSSGGGCC---CCEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCe---------EEEEECCCCC---------ceeeeeecccccccccC---cceEE
Confidence 6799999999999999999998 7987 9999998321 13333311 1112 33999
Q ss_pred EEEecCC-CCcceEEEEEeCCeEEEEEcccccccccceeEEecCCC------------CcceEEEeecCCeEEEEEEcCC
Q 037368 136 FLVLEEA-PPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQC------------SVMGLGFRVDGQALQLFAVTPN 202 (823)
Q Consensus 136 va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~------------~It~l~fs~dg~~~~l~~~t~~ 202 (823)
++|+|++ .. +|+|+.||+|++|+..-..........+..+.. +|++++|+|+|+ .|++++.+
T Consensus 232 ~~~~p~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~~ 306 (447)
T 3dw8_B 232 AEFHPNSCNT---FVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR--YMMTRDYL 306 (447)
T ss_dssp EEECSSCTTE---EEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS--EEEEEESS
T ss_pred EEECCCCCcE---EEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC--EEEEeeCC
Confidence 9999998 88 999999999999986310000000233333333 899999999984 56666667
Q ss_pred eEEEEEecCCCCcceEEccCCCcc---------------ceecccCCCeEE-Eee-CCeEEEEecCC
Q 037368 203 SVILFSLQNQPPKRQFLDNIGCST---------------NSVAMSDRLELI-IGR-PEAVYFYEVDG 252 (823)
Q Consensus 203 ~V~~~d~~~~~~~~~~l~~~~~~~---------------~~~~~s~~~~li-v~~-~~~I~i~~~~g 252 (823)
.|++||+...+.+...+..|.... ..++|+|++.++ +|+ ++.|++|++.+
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 799999975344556665553211 127899998755 444 46899999874
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.76 E-value=1.6e-16 Score=186.27 Aligned_cols=235 Identities=12% Similarity=0.123 Sum_probs=168.2
Q ss_pred CCC-eEEEeeCC----CEEEEEecCCeEEEEc-CC--------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcc
Q 037368 25 SGN-ITCCSSGR----GKVVIGCDDGAVSLLD-RG--------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSA 90 (823)
Q Consensus 25 ~~~-is~~~~~~----~~l~~gs~dG~i~~~d-~~--------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~ 90 (823)
... |+|+++++ .+|++|+.||+|++|| .+ .+....+.+|.++|.+++|+|++++|++++.|...
T Consensus 63 ~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-- 140 (615)
T 1pgu_A 63 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN-- 140 (615)
T ss_dssp TTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC--
T ss_pred CCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC--
Confidence 345 88888754 5899999999999999 43 36778899999999999999999999999988310
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccc
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERI 169 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~ 169 (823)
...|.+||..+ ++..+..+ ..+ |++++|+|++. . +++|+.||.|++|+.. .+
T Consensus 141 ---~~~v~~~d~~~------------~~~~~~~~--~~~---v~~~~~~~~~~~~---l~~~~~d~~v~vwd~~----~~ 193 (615)
T 1pgu_A 141 ---FGVFISWDSGN------------SLGEVSGH--SQR---INACHLKQSRPMR---SMTVGDDGSVVFYQGP----PF 193 (615)
T ss_dssp ---SEEEEETTTCC------------EEEECCSC--SSC---EEEEEECSSSSCE---EEEEETTTEEEEEETT----TB
T ss_pred ---ccEEEEEECCC------------cceeeecC--Ccc---EEEEEECCCCCcE---EEEEeCCCcEEEEeCC----Cc
Confidence 01199998431 34444322 333 99999999997 7 9999999999999863 12
Q ss_pred cceeEEecCCC---CcceEEEeec-CCeEEEEEE-cCCeEEEEEecCCCCcceEE-c---cCCCccceecccCCCe-EEE
Q 037368 170 TRFKLQVDNQC---SVMGLGFRVD-GQALQLFAV-TPNSVILFSLQNQPPKRQFL-D---NIGCSTNSVAMSDRLE-LII 239 (823)
Q Consensus 170 ~k~~~~~~~~~---~It~l~fs~d-g~~~~l~~~-t~~~V~~~d~~~~~~~~~~l-~---~~~~~~~~~~~s~~~~-liv 239 (823)
.....+..+.+ +|++++|+|+ ++ .++++ .++.|++||+.... ....+ . .|...+.+++|+ ++. +++
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRDVEFSPDSGE--FVITVGSDRKISCFDGKSGE-FLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp EEEEEECSSSCTTCCEEEEEECSTTCC--EEEEEETTCCEEEEETTTCC-EEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred ceeeeecccCCCCceEEEEEECCCCCC--EEEEEeCCCeEEEEECCCCC-EeEEecccccccCCceEEEEEc-CCCEEEE
Confidence 22233344566 8999999999 74 45555 45679999987543 44555 4 678889999999 776 445
Q ss_pred ee-CCeEEEEecCCCCccccccC-------CeEEEEe-eCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 240 GR-PEAVYFYEVDGRGPCWAFEG-------EKKLLGW-FRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 240 ~~-~~~I~i~~~~g~~~~~~~~g-------~~~~i~~-~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
++ ++.|++|+++.......+.. ....+.+ .+.++++++. +++|++||+.+...
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-----DGTLNFYELGHDEV 331 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-----TSCEEEEETTEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-----CCCEEEEECCCCcE
Confidence 54 46899999874322222222 1233333 6778888874 58999999986543
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.76 E-value=2.7e-16 Score=176.92 Aligned_cols=253 Identities=13% Similarity=0.089 Sum_probs=167.9
Q ss_pred EeEeecccceeEEEEecC-CCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEE
Q 037368 58 FGFQAHSSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSF 136 (823)
Q Consensus 58 ~~~~~H~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~v 136 (823)
....+|.+.|++++++|+ +++|+|++.||+ |+|||+..........+....+.++..+ ..+ |+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~---------V~vwd~~~~~~~~~~~~~~~~~~~~~~h--~~~---v~~l 187 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSD---------VLVFDYTKHPSKPEPSGECQPDLRLRGH--QKE---GYGL 187 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSC---------EEEEEGGGSCSSCCTTCCCCCSEEEECC--SSC---CCCE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCc---------EEEEECCCcccccCccccCCCcEEecCC--CCC---eEEE
Confidence 345679999999999997 689999999998 9999997531100001112234455533 333 9999
Q ss_pred EEecCCC-CcceEEEEEeCCeEEEEEccccccccc---ceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecC
Q 037368 137 LVLEEAP-PILLIAIGLDNGCIYCIKGDIARERIT---RFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQN 211 (823)
Q Consensus 137 a~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~---k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~ 211 (823)
+|+|++. . +++|+.||+|.+|+..-...... ....+..+..+|++++|+|++. ..++++ .++.|++||++.
T Consensus 188 ~~~~~~~~~---l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 188 SWNPNLNGY---LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE-SLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp EECTTSTTE---EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTC
T ss_pred EeCCCCCCe---EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC-CEEEEEeCCCeEEEEECCC
Confidence 9999988 8 99999999999998642000001 0223335678899999999543 345444 466799999976
Q ss_pred CC--CcceEEccCCCccceecccCCCe--EEEee-CCeEEEEecCCC-CccccccCC---eEEEEee--CcE-EEEEEec
Q 037368 212 QP--PKRQFLDNIGCSTNSVAMSDRLE--LIIGR-PEAVYFYEVDGR-GPCWAFEGE---KKLLGWF--RGY-LLCVIAD 279 (823)
Q Consensus 212 ~~--~~~~~l~~~~~~~~~~~~s~~~~--liv~~-~~~I~i~~~~g~-~~~~~~~g~---~~~i~~~--~~y-lv~~s~d 279 (823)
.. .+...+..|...++|++|+|++. +++|+ ++.|++|+++.. .+...+.+| ...+.|. +.+ +++++
T Consensus 264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~-- 341 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-- 341 (430)
T ss_dssp SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE--
T ss_pred CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe--
Confidence 42 35566667888999999999885 44555 468999999753 333444444 4556664 444 55555
Q ss_pred CCCCccEEEEEeCCC---------------CEEEE-eccccceeEE-EeecCc-EEEEEcCCeEEEEeecCh
Q 037368 280 QRNSKNIFNVYDLKN---------------RLIAH-SLVVKEVSHM-LCEWGN-IILVMTDKSVLCIGEKDM 333 (823)
Q Consensus 280 ~~~~~~~I~I~D~~~---------------~~i~~-~~~i~~v~~v-~~~~~~-~~vvs~~~~v~~l~~~~~ 333 (823)
.+++|+|||+.. +.+.. ..+-..+..+ +++.+. +++.++.+..++++..+.
T Consensus 342 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 342 ---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp ---TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ---CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 468999999975 33332 2233335554 666776 676666666777765543
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.76 E-value=3e-16 Score=168.76 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=138.1
Q ss_pred eEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE
Q 037368 59 GFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV 138 (823)
Q Consensus 59 ~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~ 138 (823)
.+++|++.|++++|+|++++|+|++.||+ |+|||+.... ....+..++..+ ..+ |++++|
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~---------i~iw~~~~~~------~~~~~~~~~~~~--~~~---v~~~~~ 65 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQH---------IKVFKLDKDT------SNWELSDSWRAH--DSS---IVAIDW 65 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSE---------EEEEEECSSS------CCEEEEEEEECC--SSC---EEEEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCe---------EEEEECCCCC------CcceecceeccC--CCc---EEEEEE
Confidence 56799999999999999999999999998 9999998532 111244444422 344 999999
Q ss_pred ec--CCCCcceEEEEEeCCeEEEEEccccccc--c---cceeEEecCCCCcceEEEeec--CCeEEEEEEcCCeEEEEEe
Q 037368 139 LE--EAPPILLIAIGLDNGCIYCIKGDIARER--I---TRFKLQVDNQCSVMGLGFRVD--GQALQLFAVTPNSVILFSL 209 (823)
Q Consensus 139 ~~--d~~~~~~ia~G~~dG~V~l~~~~~~~~~--~---~k~~~~~~~~~~It~l~fs~d--g~~~~l~~~t~~~V~~~d~ 209 (823)
+| |+.. +++|+.||.|++|+..-.... . .....+..+.++|++++|+|+ ++ .++.++.++.|++||+
T Consensus 66 ~~~~d~~~---l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 66 ASPEYGRI---IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDA 141 (351)
T ss_dssp CCGGGCSE---EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEEC
T ss_pred cCCCCCCE---EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecC
Confidence 99 6889 999999999999986411000 0 112233456789999999998 73 3344445667999998
Q ss_pred cCCCCcceE------------EccCCCccceecccCC---Ce-EEEeeCC-eEEEEecCCCCc--cccccCC---eEEEE
Q 037368 210 QNQPPKRQF------------LDNIGCSTNSVAMSDR---LE-LIIGRPE-AVYFYEVDGRGP--CWAFEGE---KKLLG 267 (823)
Q Consensus 210 ~~~~~~~~~------------l~~~~~~~~~~~~s~~---~~-liv~~~~-~I~i~~~~g~~~--~~~~~g~---~~~i~ 267 (823)
......... ...+...+.|++|+|+ +. ++++..+ .+.+|....... ...+.+| ...+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 142 LEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp SSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE
T ss_pred CChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE
Confidence 754311110 0145567789999985 54 5566655 554554432221 2344454 34555
Q ss_pred ee--C----cEEEEEEecCCCCccEEEEEeCCC
Q 037368 268 WF--R----GYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 268 ~~--~----~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
|. + .++++++ .+++|++||+..
T Consensus 222 ~~p~~~~~~~~l~s~~-----~dg~i~iwd~~~ 249 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGC-----KDGRIRIFKITE 249 (351)
T ss_dssp ECCCSSCSSEEEEEEE-----TTSCEEEEEEEE
T ss_pred ECCCCCCcceEEEEEc-----CCCeEEEEeCCC
Confidence 54 3 4666666 468999999865
No 109
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.76 E-value=2.9e-16 Score=167.61 Aligned_cols=232 Identities=11% Similarity=0.081 Sum_probs=165.3
Q ss_pred CeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.|+|+++.+ .++++|+.||+|++|+ .+++.++++.+|...+.++.. ++..++|++.|+. +++|+..
T Consensus 69 ~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~---------~~~~~~~ 137 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGH---------IHHHDVR 137 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSE---------EEEEETT
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCc---------eEeeecC
Confidence 488887753 6899999999999999 789999999999999988776 5689999999997 9999987
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcc
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVM 183 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It 183 (823)
... ..+.++..+ ..+ +.++++++++.. +++|+.||+|++|+..-.+.............++|.
T Consensus 138 ~~~---------~~~~~~~~~--~~~---~~~~~~~~~~~~---l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 200 (318)
T 4ggc_A 138 VAE---------HHVATLSGH--SQE---VCGLRWAPDGRH---LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 200 (318)
T ss_dssp SSS---------CEEEEEECC--SSC---EEEEEECTTSSE---EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE
T ss_pred CCc---------eeEEEEcCc--cCc---eEEEEEcCCCCE---EEEEecCcceeEEECCCCcccccceeeecccCCceE
Confidence 431 234444422 333 999999999999 999999999999986311111111122234578899
Q ss_pred eEEEeecCCeEEEEEEc---CCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEee---CCeEEEEecCCCCcc
Q 037368 184 GLGFRVDGQALQLFAVT---PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIGR---PEAVYFYEVDGRGPC 256 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t---~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~~---~~~I~i~~~~g~~~~ 256 (823)
++.|++++. ..+..++ ++.|++|+..... ... ...+...+.++.++|++. ++++. ++.|++|+.......
T Consensus 201 ~~~~~~~~~-~~~~~~~~~~~~~i~lwd~~~~~-~~~-~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 201 AVAWCPWQS-NVLATGGGTSDRHIRIWNVCSGA-CLS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp EEEECTTST-TEEEEEECTTTCEEEEEETTTCC-EEE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred EEEecCCCC-cEEEEEecCCCCEEEEEeccccc-ccc-cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 999998874 3343332 3469999987543 222 223555677788887665 44433 468999998754444
Q ss_pred ccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 257 WAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 257 ~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
..+.|| ...++| ++.+|++++ .|++|+|||+..
T Consensus 278 ~~l~gH~~~V~~l~~spdg~~l~S~s-----~D~~v~iWd~~~ 315 (318)
T 4ggc_A 278 AELKGHTSRVLSLTMSPDGATVASAA-----ADETLRLWRCFE 315 (318)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEE-----TTTEEEEECCSC
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe-----cCCeEEEEECCC
Confidence 567776 345555 567898887 468999999853
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.75 E-value=9.9e-17 Score=196.97 Aligned_cols=191 Identities=13% Similarity=0.095 Sum_probs=141.2
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
...|+|+++++ .+||+|+.||+|++|+ .+++.... ..|..+|.+++|+| |++|+|+|.|++ |+|||
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D~~---------v~lWd 85 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLVVINAKDT---------VYVLS 85 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE-CSSCCCEEEEEEET-TTEEEEEETTCE---------EEEEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEEEEECcCe---------EEEEE
Confidence 34688888753 5899999999999999 44554433 35888999999999 889999999998 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce---------
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF--------- 172 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~--------- 172 (823)
+... .++.++. + ..+ |++++|+|++.. +|+|+.||+|++|+..- +...
T Consensus 86 ~~~~----------~~~~~~~-~--~~~---V~~v~~sp~g~~---l~sgs~dg~V~lwd~~~----~~~~~~~i~~~~~ 142 (902)
T 2oaj_A 86 LYSQ----------KVLTTVF-V--PGK---ITSIDTDASLDW---MLIGLQNGSMIVYDIDR----DQLSSFKLDNLQK 142 (902)
T ss_dssp TTTC----------SEEEEEE-C--SSC---EEEEECCTTCSE---EEEEETTSCEEEEETTT----TEEEEEEECCHHH
T ss_pred CCCC----------cEEEEEc-C--CCC---EEEEEECCCCCE---EEEEcCCCcEEEEECCC----Cccccceeccccc
Confidence 9842 3666654 2 223 999999999999 99999999999998631 1100
Q ss_pred --eEEecCCCCcceEEEeecCCeEEEEEEcCC-eEEEEEecCCCCcceEEccC------------------CCccceecc
Q 037368 173 --KLQVDNQCSVMGLGFRVDGQALQLFAVTPN-SVILFSLQNQPPKRQFLDNI------------------GCSTNSVAM 231 (823)
Q Consensus 173 --~~~~~~~~~It~l~fs~dg~~~~l~~~t~~-~V~~~d~~~~~~~~~~l~~~------------------~~~~~~~~~ 231 (823)
.....+.++|++|+|+|++. ..+++++.+ .| +||+.... +...+..+ ...+.+++|
T Consensus 143 ~~~~~~~h~~~V~sl~~sp~~~-~~l~~g~~dg~v-lWd~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 143 SSFFPAARLSPIVSIQWNPRDI-GTVLISYEYVTL-TYSLVENE-IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHTCSSSCCCCCCEEEEETTEE-EEEEEECSSCEE-EEETTTTE-EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccccccCCCCeEEEEEccCCC-CEEEEEeCCCcE-EEECCCCc-eEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 01123468999999999642 356666554 57 99997642 34444433 356889999
Q ss_pred cCCCeEE-Eee-CCeEEEEecCC
Q 037368 232 SDRLELI-IGR-PEAVYFYEVDG 252 (823)
Q Consensus 232 s~~~~li-v~~-~~~I~i~~~~g 252 (823)
+|+|.++ +++ |+.|++|+++.
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTT
T ss_pred cCCCCEEEEEECCCeEEEEECCC
Confidence 9999754 454 45899999863
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=8.4e-17 Score=180.90 Aligned_cols=196 Identities=10% Similarity=0.132 Sum_probs=137.0
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEcC----CCeeeEeEeec------------ccceeEEE--EecCCCEEEEEec
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLDR----GLKFNFGFQAH------------SSSVLFLQ--QLKQRNFLVTVGE 84 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d~----~~~~~~~~~~H------------~~~V~~i~--~~~~~~~l~s~s~ 84 (823)
...|+|+++.+ ..|++|+.||+|++||. +++..+.+++| ...+.++. +++++++|++++.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 44688888754 68999999999999983 45555555443 34566666 4478999999999
Q ss_pred CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccc
Q 037368 85 DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDI 164 (823)
Q Consensus 85 D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~ 164 (823)
|++ |++||+... .++.++....+..+ |++++|+|++.. +|+|+.||.|++|+..
T Consensus 191 d~~---------i~iwd~~~~----------~~~~~~~~~~h~~~---v~~~~~s~~~~~---l~s~~~dg~i~iwd~~- 244 (437)
T 3gre_A 191 LSR---------VIIFDIRTL----------ERLQIIENSPRHGA---VSSICIDEECCV---LILGTTRGIIDIWDIR- 244 (437)
T ss_dssp TSE---------EEEEETTTC----------CEEEEEECCGGGCC---EEEEEECTTSCE---EEEEETTSCEEEEETT-
T ss_pred CCe---------EEEEeCCCC----------eeeEEEccCCCCCc---eEEEEECCCCCE---EEEEcCCCeEEEEEcC-
Confidence 998 999999842 35666664212234 999999999999 9999999999999863
Q ss_pred ccccccceeEEe-cCCCCcceEEEee----cCCeEEEEEEcCC-eEEEEEecCCCCcceEEcc-----------------
Q 037368 165 ARERITRFKLQV-DNQCSVMGLGFRV----DGQALQLFAVTPN-SVILFSLQNQPPKRQFLDN----------------- 221 (823)
Q Consensus 165 ~~~~~~k~~~~~-~~~~~It~l~fs~----dg~~~~l~~~t~~-~V~~~d~~~~~~~~~~l~~----------------- 221 (823)
.+.....+. .+..+|+++.|+| ++ ..+++++.+ .|++||+.... ....+..
T Consensus 245 ---~~~~~~~~~~~~~~~v~~~~~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 245 ---FNVLIRSWSFGDHAPITHVEVCQFYGKNS--VIVVGGSSKTFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp ---TTEEEEEEBCTTCEEEEEEEECTTTCTTE--EEEEEESTTEEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSG
T ss_pred ---CccEEEEEecCCCCceEEEEeccccCCCc--cEEEEEcCCCcEEEEEcCCCc-EEEEEEcCCCCCccceeccccccc
Confidence 122222232 5567899997665 44 467777655 49999997532 2233322
Q ss_pred ---------CCCccceecccCCCeEEEee-CCeEEEEecCC
Q 037368 222 ---------IGCSTNSVAMSDRLELIIGR-PEAVYFYEVDG 252 (823)
Q Consensus 222 ---------~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g 252 (823)
|...+.+++|+++..+++|+ ++.|++|++..
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTC
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCC
Confidence 34456777787333455555 56999999874
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.74 E-value=4.5e-17 Score=183.90 Aligned_cols=211 Identities=9% Similarity=0.044 Sum_probs=144.7
Q ss_pred cCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEE
Q 037368 43 DDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILR 122 (823)
Q Consensus 43 ~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~ 122 (823)
.++.+.+|+.++..+.++ +|+..|.+++|+|+|+.||++|.||+ |+|||... ++.++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~---------V~iwd~~~------------~l~~l~ 122 (588)
T 2j04_A 65 FENKLDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGN---------VSVFKDNK------------MLTNLD 122 (588)
T ss_dssp CCCTTTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSC---------EEEEETTE------------EEEECC
T ss_pred CcceEEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCc---------EEEEeCCc------------eeeecc
Confidence 355555555444443233 46889999999999999999999998 99999641 454544
Q ss_pred eccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccc---c---ceeEEe----cCCCCcceEEEeecCC
Q 037368 123 VFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI---T---RFKLQV----DNQCSVMGLGFRVDGQ 192 (823)
Q Consensus 123 ~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~---~---k~~~~~----~~~~~It~l~fs~dg~ 192 (823)
+....+...+.+++|||||+. +|+|+.||+|++|+.. ... . ....+. ++.+.|.+++|+|+|
T Consensus 123 -~~~~~~~~sv~svafSPDG~~---LAsgs~DGtVkIWd~~---~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 123 -SKGNLSSRTYHCFEWNPIESS---IVVGNEDGELQFFSIR---KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp -CSSCSTTTCEEEEEECSSSSC---EEEEETTSEEEEEECC---CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred -CCCccccccEEEEEEcCCCCE---EEEEcCCCEEEEEECC---CCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 321111234999999999999 9999999999999863 110 0 123332 235799999999986
Q ss_pred eEEEEEEcCCeEEEEEecCCCC--cceEE-ccCCCccceecccCCCeEEEeeCCeEEEEecCCCCc-cccccCC---eEE
Q 037368 193 ALQLFAVTPNSVILFSLQNQPP--KRQFL-DNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGP-CWAFEGE---KKL 265 (823)
Q Consensus 193 ~~~l~~~t~~~V~~~d~~~~~~--~~~~l-~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~-~~~~~g~---~~~ 265 (823)
+++++.++.|++|++.++.. ..+++ ..|...+.+++|+ ++.++++++++|++|++.+... .+.+ || ...
T Consensus 195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~~~tIkLWd~~~~~~~~~~~-gh~~~V~~ 270 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTCPGYVHKIDLKNYSISSLKT-GSLENFHI 270 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEECSSEEEEEETTTTEEEEEEC-SCCSCCCE
T ss_pred --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEeCCeEEEEECCCCeEEEEEc-CCCceEEE
Confidence 56666778899999987542 22456 3666788999998 5677778888999999986543 1222 54 233
Q ss_pred EEe----eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 266 LGW----FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 266 i~~----~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+++ ++..++++. ++++ ++|..+
T Consensus 271 va~~~s~d~~~La~a~-----edG~-klw~~d 296 (588)
T 2j04_A 271 IPLNHEKESTILLMSN-----KTSY-KVLLED 296 (588)
T ss_dssp EEETTCSSCEEEEECS-----SCEE-EEEESS
T ss_pred EEeeeCCCCCEEEEEc-----CCCC-EEEeec
Confidence 444 333444443 4577 888764
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.74 E-value=6.6e-16 Score=170.77 Aligned_cols=234 Identities=13% Similarity=0.036 Sum_probs=158.4
Q ss_pred CCCeEEEeeCC---CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecC---CCEEEEEecCCCCcccccceeE
Q 037368 25 SGNITCCSSGR---GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQ---RNFLVTVGEDEQVSAQQSAVCL 97 (823)
Q Consensus 25 ~~~is~~~~~~---~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~---~~~l~s~s~D~~~~~~~~~~~v 97 (823)
...|+++++.+ ..+++|+.||.|++|| .+++....+. |...+.++.++|. +.++++++.|+. |
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v 168 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPK---------V 168 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSS---------E
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCe---------E
Confidence 34588887643 4899999999999999 6777776665 7889999999984 459999999998 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccccceeEE-
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERITRFKLQ- 175 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~- 175 (823)
++||+... .++..+..+ ..+ |++++|+|++. . +|+|+.||.|++|+..- .......+
T Consensus 169 ~~~d~~~~----------~~~~~~~~~--~~~---v~~~~~~~~~~~l---l~~~~~dg~i~i~d~~~---~~~~~~~~~ 227 (408)
T 4a11_B 169 QLCDLKSG----------SCSHILQGH--RQE---ILAVSWSPRYDYI---LATASADSRVKLWDVRR---ASGCLITLD 227 (408)
T ss_dssp EEEESSSS----------CCCEEECCC--CSC---EEEEEECSSCTTE---EEEEETTSCEEEEETTC---SSCCSEECC
T ss_pred EEEeCCCc----------ceeeeecCC--CCc---EEEEEECCCCCcE---EEEEcCCCcEEEEECCC---CCccccccc
Confidence 99999843 234454422 334 99999999988 6 78999999999998631 11011111
Q ss_pred --------------ecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccC-----CCccc-eecccCC
Q 037368 176 --------------VDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNI-----GCSTN-SVAMSDR 234 (823)
Q Consensus 176 --------------~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~-----~~~~~-~~~~s~~ 234 (823)
..+.++|++++|+|+|+ .++++ .++.|++|++..... ...+..+ ..... .....+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
T 4a11_B 228 QHNGKKSQAVESANTAHNGKVNGLCFTSDGL--HLLTVGTDNRMRLWNSSNGEN-TLVNYGKVCNNSKKGLKFTVSCGCS 304 (408)
T ss_dssp TTTTCSCCCTTTSSCSCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCB-CCCCCCCCCCCCSSCCCCEECCSSS
T ss_pred ccccccceeeccccccccCceeEEEEcCCCC--EEEEecCCCeEEEEECCCCcc-ceeccccccccccccceeEEecCCC
Confidence 23467899999999984 45544 566799999975432 1111111 11111 2222345
Q ss_pred CeEEE-eeCCeEEEEecCCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 235 LELII-GRPEAVYFYEVDGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 235 ~~liv-~~~~~I~i~~~~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
+.+++ +.++.|++|+.........+.+| ...+.| .+.+|++++ .+++|++||+.+...
T Consensus 305 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-----~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 305 SEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS-----RDCNILAWVPSLYEP 368 (408)
T ss_dssp SCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE-----TTSCEEEEEECC---
T ss_pred ceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC-----CCCeEEEEeCCCCCc
Confidence 55554 55679999998754433455555 344555 467888887 458999999987543
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=4.9e-17 Score=196.42 Aligned_cols=240 Identities=15% Similarity=0.170 Sum_probs=161.4
Q ss_pred EeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEE
Q 037368 58 FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFL 137 (823)
Q Consensus 58 ~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va 137 (823)
..+.+|.++|++++|+|+|++|+|+|.||+ |+|||+... +..++.++..+ ..+ |++++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~---------I~vwd~~~~--------~~~~~~~l~~h--~~~---V~~l~ 60 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKT---------IKIFEVEGE--------THKLIDTLTGH--EGP---VWRVD 60 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTE---------EEEEEEETT--------EEEEEEEECCC--SSC---EEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCc---------EEEEecCCC--------CCccceeccCC--cCc---eEEEE
Confidence 468899999999999999999999999998 999998732 22344454422 345 99999
Q ss_pred EecC--CCCcceEEEEEeCCeEEEEEccccccccc--ceeEEecCCCCcceEEEeec--CCeEEEEEEcCCeEEEEEecC
Q 037368 138 VLEE--APPILLIAIGLDNGCIYCIKGDIARERIT--RFKLQVDNQCSVMGLGFRVD--GQALQLFAVTPNSVILFSLQN 211 (823)
Q Consensus 138 ~~~d--~~~~~~ia~G~~dG~V~l~~~~~~~~~~~--k~~~~~~~~~~It~l~fs~d--g~~~~l~~~t~~~V~~~d~~~ 211 (823)
|+|+ ++. +++|+.||+|++|+.. .+. .......+.++|++++|+|+ |+ .++.++.++.|++||+..
T Consensus 61 ~s~~~~~~~---l~s~s~Dg~I~vwd~~----~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 61 WAHPKFGTI---LASCSYDGKVLIWKEE----NGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp ECCTTSCSE---EEEEETTSCEEEEEEE----TTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCS
T ss_pred ecCCCCCCE---EEEEeCCCeEEEEECC----CCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeec
Confidence 9988 889 9999999999999863 111 22233456789999999998 64 344444556799999976
Q ss_pred CC-CcceEEccCCCccceecccC-------------CCe-EEEee-CCeEEEEecCCCCcc----ccccCC---eEEEEe
Q 037368 212 QP-PKRQFLDNIGCSTNSVAMSD-------------RLE-LIIGR-PEAVYFYEVDGRGPC----WAFEGE---KKLLGW 268 (823)
Q Consensus 212 ~~-~~~~~l~~~~~~~~~~~~s~-------------~~~-liv~~-~~~I~i~~~~g~~~~----~~~~g~---~~~i~~ 268 (823)
.. .....+..|...+.+++|+| ++. +++|+ ++.|++|+++..... ..+.+| ...+.|
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 53 23445667888899999998 355 55555 468999998743221 234444 455665
Q ss_pred e-----CcEEEEEEecCCCCccEEEEEeCCCCE-----EEEe--ccccceeEE-EeecCcEEEEEcCCeEEEEeecC
Q 037368 269 F-----RGYLLCVIADQRNSKNIFNVYDLKNRL-----IAHS--LVVKEVSHM-LCEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 269 ~-----~~ylv~~s~d~~~~~~~I~I~D~~~~~-----i~~~--~~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
. +.++++++ .+++|+|||+.++. .... .+-..+..+ +++++..+++++.+..++++..+
T Consensus 213 sp~~~~~~~l~s~s-----~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 213 SPTVLLRSYLASVS-----QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCCCSSSEEEEEEE-----SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred ccCCCCCCEEEEEe-----cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 4 66777777 45899999997642 1111 111123333 66777777666555455665544
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.74 E-value=5.1e-17 Score=180.60 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=144.5
Q ss_pred CEEEEEecCCeEEEEc-CCCee-----eEeEeecccceeEEEEec--------CCCEEEEEecCCCCcccccceeEEEEe
Q 037368 36 GKVVIGCDDGAVSLLD-RGLKF-----NFGFQAHSSSVLFLQQLK--------QRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d-~~~~~-----~~~~~~H~~~V~~i~~~~--------~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
..+++|+.|++|++|| .+++. +..+.+|++.|++++|+| +|++|||+|+|++ |||||
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t---------v~~Wd 172 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT---------LIIWR 172 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE---------EEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe---------EEEEE
Confidence 4689999999999999 55543 334678999999999998 7899999999998 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC-CCcceEEEEEeCCeEEEEEccccccc---c--------
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA-PPILLIAIGLDNGCIYCIKGDIARER---I-------- 169 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~---~-------- 169 (823)
+... .++..+..+ ..+ |.+++|+|++ .. +++|+.||+|++|+....... .
T Consensus 173 ~~~~----------~~~~~~~~~--~~~---v~~v~~~p~~~~~---l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 173 LTDE----------GPILAGYPL--SSP---GISVQFRPSNPNQ---LIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EETT----------EEEEEEEEC--SSC---EEEEEEETTEEEE---EEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCC----------ceeeeecCC--CCC---cEEEEECCCCCce---EEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 9742 133333322 345 9999999987 47 999999999999985310000 0
Q ss_pred cce--------e--EEecCCCCcceEEEe-ecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeE
Q 037368 170 TRF--------K--LQVDNQCSVMGLGFR-VDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL 237 (823)
Q Consensus 170 ~k~--------~--~~~~~~~~It~l~fs-~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l 237 (823)
... . ....+...|.++.|+ ++|+ .+++++ ++.+++||+.... ....+..+...+....++|+++.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~--~l~s~s~d~~i~vwd~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 311 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS--GILAMCKSGAWLRWNLFANN-DYNEISDSTMKLGPKNLLPNVQG 311 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTC--EEEEECTTSEEEEEEC--------------------CCSCSEEE
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCC--EEEEEeCCCCEEEEECccCC-CCceEeeecCccccEEEcccccc
Confidence 000 0 001235679999997 6774 455554 5679999987542 23334444445555666666544
Q ss_pred EEeeCCeEEEEecCCCCccccccCCeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCEE--EEeccccceeEE-Eeec
Q 037368 238 IIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLI--AHSLVVKEVSHM-LCEW 313 (823)
Q Consensus 238 iv~~~~~I~i~~~~g~~~~~~~~g~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i--~~~~~i~~v~~v-~~~~ 313 (823)
....+..+ ..++ ++ ..+. ++++++ .+++|+|||...+.. ....+-..|..+ |+++
T Consensus 312 ~~~~~~~~--------~~~~-~~-------~~~~~~~~sgs-----~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd 370 (393)
T 4gq1_A 312 ISLFPSLL--------GACP-HP-------RYMDYFATAHS-----QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD 370 (393)
T ss_dssp ECSSCCSS--------CCEE-CS-------SCTTEEEEEET-----TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT
T ss_pred ccccCcce--------eEEE-cc-------CCCCEEEEEEC-----CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC
Confidence 32211100 0000 00 0122 444443 468999999976421 122222235555 8899
Q ss_pred CcEEEEEcCCeEEEEe
Q 037368 314 GNIILVMTDKSVLCIG 329 (823)
Q Consensus 314 ~~~~vvs~~~~v~~l~ 329 (823)
|..+++++++.+..++
T Consensus 371 G~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 371 GSHLAIATEGSVLLTR 386 (393)
T ss_dssp SSEEEEEESSEEEEEE
T ss_pred CCEEEEEeCCCeEEEE
Confidence 9999888888775554
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.73 E-value=1e-16 Score=180.65 Aligned_cols=203 Identities=9% Similarity=0.018 Sum_probs=144.2
Q ss_pred CeeeEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCc
Q 037368 54 LKFNFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAK 132 (823)
Q Consensus 54 ~~~~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 132 (823)
....+...+|...|++|+|+| ++++|||||.||+ |+|||+...+ ..+ .+....+..+
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~---------i~lWd~~~~~--------~~~--~~~~~gH~~~--- 166 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGD---------IMLWNFGIKD--------KPT--FIKGIGAGGS--- 166 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSC---------EEEECSSCCS--------CCE--EECCCSSSCC---
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCE---------EEEEECCCCC--------cee--EEEccCCCCC---
Confidence 344556778999999999999 5679999999998 9999997432 112 2222233344
Q ss_pred eEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccccccceeEEec---CCCCcceEEEeecCCeEEEEEEc-CCeEEEE
Q 037368 133 ITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD---NQCSVMGLGFRVDGQALQLFAVT-PNSVILF 207 (823)
Q Consensus 133 v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~---~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~ 207 (823)
|++++|+| ++.. |++|+.||+|++|+.. +.....+.. ....+++++|+++++ .+++++ ++.|++|
T Consensus 167 V~~l~f~p~~~~~---l~s~s~D~~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~g~~dg~i~~w 236 (435)
T 4e54_B 167 ITGLKFNPLNTNQ---FYASSMEGTTRLQDFK-----GNILRVFASSDTINIWFCSLDVSASSR--MVVTGDNVGNVILL 236 (435)
T ss_dssp CCEEEECSSCTTE---EEEECSSSCEEEEETT-----SCEEEEEECCSSCSCCCCCEEEETTTT--EEEEECSSSBEEEE
T ss_pred EEEEEEeCCCCCE---EEEEeCCCEEEEeecc-----CCceeEEeccCCCCccEEEEEECCCCC--EEEEEeCCCcEeee
Confidence 99999998 6788 9999999999999853 222333332 245789999999984 566665 4569999
Q ss_pred EecCCCCcceEEccCCCccceecccCCCe--EEEee-CCeEEEEecCCCCc--c-ccccCC---eEEEEe--eCcEEEEE
Q 037368 208 SLQNQPPKRQFLDNIGCSTNSVAMSDRLE--LIIGR-PEAVYFYEVDGRGP--C-WAFEGE---KKLLGW--FRGYLLCV 276 (823)
Q Consensus 208 d~~~~~~~~~~l~~~~~~~~~~~~s~~~~--liv~~-~~~I~i~~~~g~~~--~-~~~~g~---~~~i~~--~~~ylv~~ 276 (823)
|++++ ....+..|...+.+++|+|++. +++++ ++.|++|+++.... . ....+| ...++| .+.+|+++
T Consensus 237 d~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 237 NMDGK--ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp ESSSC--BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred ccCcc--eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 99764 3455667888899999999775 44554 46899999863221 1 122333 344444 56799888
Q ss_pred EecCCCCccEEEEEeCCCC
Q 037368 277 IADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 277 s~d~~~~~~~I~I~D~~~~ 295 (823)
+. |++|+|||+.+.
T Consensus 315 ~~-----D~~i~iwd~~~~ 328 (435)
T 4e54_B 315 DQ-----KSEIRVYSASQW 328 (435)
T ss_dssp ES-----SSCEEEEESSSS
T ss_pred cC-----CCEEEEEECCCC
Confidence 74 589999999763
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.72 E-value=3.4e-16 Score=169.11 Aligned_cols=229 Identities=12% Similarity=0.108 Sum_probs=158.7
Q ss_pred CCCeEEEeeC--CC-EEEEEecCCeEEEEcC-CCeeeEeEee--cccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 25 SGNITCCSSG--RG-KVVIGCDDGAVSLLDR-GLKFNFGFQA--HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 25 ~~~is~~~~~--~~-~l~~gs~dG~i~~~d~-~~~~~~~~~~--H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...|+|++.. +. .|++|+.||.|++||. .......+.+ |...|.+++|+| ++.|+|++.|++ |+
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~---------i~ 125 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGL---------IE 125 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSE---------EE
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCe---------EE
Confidence 3458777764 46 7999999999999996 6655678899 999999999999 999999999998 99
Q ss_pred EEeCCCCCCCCC-CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec
Q 037368 99 VFDLDKMEPEGT-SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 99 vWdl~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+||+........ ..+. ++.++. .. ..|++++|+|++ +++|+.+|.|++|+..-. ...........
T Consensus 126 iwd~~~~~~~~~~~~~~--~~~~~~---~~---~~v~~~~~~~~~-----l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~ 191 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNL--NSNNTK---VK---NKIFTMDTNSSR-----LIVGMNNSQVQWFRLPLC-EDDNGTIEESG 191 (342)
T ss_dssp EECHHHHTTBCEEEEES--CSSSSS---SC---CCEEEEEECSSE-----EEEEESTTEEEEEESSCC-TTCCCEEEECS
T ss_pred EEcccccccccccccCC--eeeEEe---eC---CceEEEEecCCc-----EEEEeCCCeEEEEECCcc-ccccceeeecC
Confidence 999874110000 0011 111111 12 339999999974 788899999999986310 00111112234
Q ss_pred CCCCcceEEEee-cCCeEEEEEE-cCCeEEEEEecCC-----CCcceEEccCCC---------ccceecccCCCeE-EEe
Q 037368 178 NQCSVMGLGFRV-DGQALQLFAV-TPNSVILFSLQNQ-----PPKRQFLDNIGC---------STNSVAMSDRLEL-IIG 240 (823)
Q Consensus 178 ~~~~It~l~fs~-dg~~~~l~~~-t~~~V~~~d~~~~-----~~~~~~l~~~~~---------~~~~~~~s~~~~l-iv~ 240 (823)
+..+|++++|+| +++ .++++ .++.|.+|+++.. ......+..|.. .+.+++|+|++.+ +++
T Consensus 192 ~~~~i~~i~~~~~~~~--~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQE--GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp CSSCEEEEEECSGGGC--EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred CCCceeEEEECCCCCC--EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 577899999999 884 44444 4567999998765 245566665543 7889999998874 455
Q ss_pred e-CCeEEEEecCCCCccccccCC----eEEEEeeCcEEEEEEec
Q 037368 241 R-PEAVYFYEVDGRGPCWAFEGE----KKLLGWFRGYLLCVIAD 279 (823)
Q Consensus 241 ~-~~~I~i~~~~g~~~~~~~~g~----~~~i~~~~~ylv~~s~d 279 (823)
+ ++.|++|++........+.++ ...+++.+.++++++.|
T Consensus 270 ~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~D 313 (342)
T 1yfq_A 270 GSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSD 313 (342)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEEC
T ss_pred cCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEecC
Confidence 5 458999998743333345544 34455778899888866
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.2e-15 Score=172.54 Aligned_cols=219 Identities=8% Similarity=0.010 Sum_probs=151.6
Q ss_pred CeEEEeeCC--CEE-EEEecCCeEEEEc-C--CCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 27 NITCCSSGR--GKV-VIGCDDGAVSLLD-R--GLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 27 ~is~~~~~~--~~l-~~gs~dG~i~~~d-~--~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
.|+|+++++ .+| ++|+.||.|++|| . +++.++.+. +|...|.+++|+|+|++|++++.|+. |+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~---------v~ 174 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGD---------VY 174 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE---------EE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCc---------EE
Confidence 588887643 465 8999999999999 6 788888887 56689999999999999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC---CCCcceEEEEEeCCeEEEEEcccccccccceeE-
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE---APPILLIAIGLDNGCIYCIKGDIARERITRFKL- 174 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d---~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~- 174 (823)
+|++..... .. .+...+..+ ..+ |++++|+|+ +.. +++|+.||+|++|+.. .+.....
T Consensus 175 ~~~~~~~~~-----~~-~~~~~~~~h--~~~---v~~~~~sp~~~~~~~---l~s~~~d~~i~vwd~~----~~~~~~~~ 236 (450)
T 2vdu_B 175 SIDINSIPE-----EK-FTQEPILGH--VSM---LTDVHLIKDSDGHQF---IITSDRDEHIKISHYP----QCFIVDKW 236 (450)
T ss_dssp EEETTSCCC-----SS-CCCCCSEEC--SSC---EEEEEEEECTTSCEE---EEEEETTSCEEEEEES----CTTCEEEE
T ss_pred EEecCCccc-----cc-ccceeeecc--cCc---eEEEEEcCCCCCCcE---EEEEcCCCcEEEEECC----CCceeeee
Confidence 999975321 00 011122222 234 999999999 889 9999999999999863 1222333
Q ss_pred EecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEc-------------------------cCCCccce
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLD-------------------------NIGCSTNS 228 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~-------------------------~~~~~~~~ 228 (823)
...+.++|++++|+ +|+ .|+++ .++.|++||+.... ....+. .....+.+
T Consensus 237 ~~~h~~~v~~~~~s-d~~--~l~s~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDY--LLLSAGGDDKIFAWDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp CCCCSSCEEEEEEC-STT--EEEEEESSSEEEEEETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred ecCCCCceEEEEEC-CCC--EEEEEeCCCeEEEEECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 33567899999999 884 45555 45679999987543 333332 11234567
Q ss_pred ecccCCCeEE-Eee--CCeEEEEec--CCCCc---ccccc--CCeEEEEeeCcEEEEE
Q 037368 229 VAMSDRLELI-IGR--PEAVYFYEV--DGRGP---CWAFE--GEKKLLGWFRGYLLCV 276 (823)
Q Consensus 229 ~~~s~~~~li-v~~--~~~I~i~~~--~g~~~---~~~~~--g~~~~i~~~~~ylv~~ 276 (823)
++|+|++.++ ++. ++.|++|++ ...+. ...+. +....++|..+.+++.
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVT 370 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEE
Confidence 8889988755 444 468999999 32221 11233 3456677766544443
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.72 E-value=5.6e-15 Score=163.08 Aligned_cols=255 Identities=10% Similarity=0.081 Sum_probs=169.7
Q ss_pred EEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCCCCC
Q 037368 37 KVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTS 114 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~ 114 (823)
.+++|+.||.|++|| .+++.++.+.+|. .+.+++|+|+|+.+ ++++.|++ |++||+...
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~---------i~v~d~~~~--------- 64 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSND---------VSIIDTATN--------- 64 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTE---------EEEEETTTT---------
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCe---------EEEEECCCC---------
Confidence 468889999999999 7788888888776 58999999999876 77778987 999999742
Q ss_pred CceEEEEEeccCCCCCCceEEEEEecCCCCcceEE-EEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCe
Q 037368 115 PDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIA-IGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQA 193 (823)
Q Consensus 115 ~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia-~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~ 193 (823)
.+++.+... .+ +.+++|+|+++. ++ +|..+|.|.+|+.. ..+..........+.+++|+++|+
T Consensus 65 -~~~~~~~~~---~~---v~~~~~spdg~~---l~~~~~~~~~v~v~d~~-----~~~~~~~~~~~~~~~~~~~s~dg~- 128 (391)
T 1l0q_A 65 -NVIATVPAG---SS---PQGVAVSPDGKQ---VYVTNMASSTLSVIDTT-----SNTVAGTVKTGKSPLGLALSPDGK- 128 (391)
T ss_dssp -EEEEEEECS---SS---EEEEEECTTSSE---EEEEETTTTEEEEEETT-----TTEEEEEEECSSSEEEEEECTTSS-
T ss_pred -eEEEEEECC---CC---ccceEECCCCCE---EEEEECCCCEEEEEECC-----CCeEEEEEeCCCCcceEEECCCCC-
Confidence 355555432 23 999999999987 75 45567999999863 122222333456789999999985
Q ss_pred EEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Ee-e-CCeEEEEecCCCCcccccc--CCeEEEE
Q 037368 194 LQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IG-R-PEAVYFYEVDGRGPCWAFE--GEKKLLG 267 (823)
Q Consensus 194 ~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~-~-~~~I~i~~~~g~~~~~~~~--g~~~~i~ 267 (823)
.++++++ ++.|++||+.+.. ....+.. +..+.+++|+|++..+ ++ . ++.|++|++........+. +....+.
T Consensus 129 ~l~~~~~~~~~v~~~d~~~~~-~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 206 (391)
T 1l0q_A 129 KLYVTNNGDKTVSVINTVTKA-VINTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIA 206 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE-EEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCc-EEEEEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceE
Confidence 3334444 4679999987542 3444443 4456888999998644 43 3 4589999987432222222 2234444
Q ss_pred e--eCcEEEEEEecCCCCccEEEEEeCCCCEEEEecccc-ceeEE-EeecCcEE-EEEcCCeEEEEee
Q 037368 268 W--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVK-EVSHM-LCEWGNII-LVMTDKSVLCIGE 330 (823)
Q Consensus 268 ~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~-~v~~v-~~~~~~~~-vvs~~~~v~~l~~ 330 (823)
+ .+.++++.+.+. .++.|.+||+.++......... .+..+ +++++..+ +.+..+..++++.
T Consensus 207 ~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 207 VNPEGTKAYVTNVDK--YFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp ECTTSSEEEEEEECS--SCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEecCc--CCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 4 466887776421 3589999999876544322222 23333 66667644 4444444445543
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.72 E-value=1.4e-15 Score=170.52 Aligned_cols=267 Identities=9% Similarity=0.048 Sum_probs=174.6
Q ss_pred CeEEEee-CCCE-EEEEecCCeEEEEc-CCCeeeE-----eEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 27 NITCCSS-GRGK-VVIGCDDGAVSLLD-RGLKFNF-----GFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 27 ~is~~~~-~~~~-l~~gs~dG~i~~~d-~~~~~~~-----~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
.+.|++. +++. +++++.+|.|++|| .+++..+ .+.+|.+.|.+++++|++.+++|++.|++ |+
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~---------v~ 194 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANA---------VH 194 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE---------EE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCE---------EE
Confidence 3434444 3444 56677888999999 6677766 45578899999999999999999999998 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceE-EEEEeCCeEEEEEcccccccccceeEEec
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI-AIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i-a~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+||+... .++.++..+ ..+ +.+++|+|+++. + ++++.+|.|.+|+.. ..+......
T Consensus 195 ~~d~~~~----------~~~~~~~~~--~~~---~~~~~~~~~~~~---l~~~~~~~~~i~~~d~~-----~~~~~~~~~ 251 (433)
T 3bws_A 195 VFDLKTL----------AYKATVDLT--GKW---SKILLYDPIRDL---VYCSNWISEDISVIDRK-----TKLEIRKTD 251 (433)
T ss_dssp EEETTTC----------CEEEEEECS--SSS---EEEEEEETTTTE---EEEEETTTTEEEEEETT-----TTEEEEECC
T ss_pred EEECCCc----------eEEEEEcCC--CCC---eeEEEEcCCCCE---EEEEecCCCcEEEEECC-----CCcEEEEec
Confidence 9999742 255555422 223 999999999987 7 555579999999863 122222233
Q ss_pred CCCCcceEEEeecCCeEEEEEEc---------CCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEe--eCCeE
Q 037368 178 NQCSVMGLGFRVDGQALQLFAVT---------PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIG--RPEAV 245 (823)
Q Consensus 178 ~~~~It~l~fs~dg~~~~l~~~t---------~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~--~~~~I 245 (823)
....+.+++|+|+|+ .+++++ ++.|++||+.+.. ....+ .+...+.+++|+|++. ++++ .++.|
T Consensus 252 ~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 252 KIGLPRGLLLSKDGK--ELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp CCSEEEEEEECTTSS--EEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEE-EEEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred CCCCceEEEEcCCCC--EEEEEECCCCccccCCCeEEEEECCCCc-EEeec-cCCCCcceEEECCCCCEEEEEecCCCEE
Confidence 456799999999984 455554 4569999987542 33333 2334567889999885 4443 34699
Q ss_pred EEEecCCCCccccc--cCCeEEEEee--CcEEEEEEecCC----------CCccEEEEEeCCCCEEEEecccc-ceeEE-
Q 037368 246 YFYEVDGRGPCWAF--EGEKKLLGWF--RGYLLCVIADQR----------NSKNIFNVYDLKNRLIAHSLVVK-EVSHM- 309 (823)
Q Consensus 246 ~i~~~~g~~~~~~~--~g~~~~i~~~--~~ylv~~s~d~~----------~~~~~I~I~D~~~~~i~~~~~i~-~v~~v- 309 (823)
++|+.++......+ .+....+++. +.++++.+.+.. +.+++|.+||+.+.......... .+..+
T Consensus 328 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~ 407 (433)
T 3bws_A 328 EVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLD 407 (433)
T ss_dssp EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred EEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEE
Confidence 99998743222222 2334555554 667877764321 12579999999876544322212 24443
Q ss_pred EeecCcEEEEE-cCCeEEEEe
Q 037368 310 LCEWGNIILVM-TDKSVLCIG 329 (823)
Q Consensus 310 ~~~~~~~~vvs-~~~~v~~l~ 329 (823)
+++++..++++ ..+..++++
T Consensus 408 ~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 408 VSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp ECTTSCEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEECCCCeEEEE
Confidence 66777665554 323344444
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.71 E-value=2.7e-15 Score=163.14 Aligned_cols=242 Identities=5% Similarity=0.005 Sum_probs=158.8
Q ss_pred CCCeeeEeEeecccceeEEEEecC---CCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCC
Q 037368 52 RGLKFNFGFQAHSSSVLFLQQLKQ---RNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQF 128 (823)
Q Consensus 52 ~~~~~~~~~~~H~~~V~~i~~~~~---~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (823)
...+.++.+++|.+.|++++|+|+ |++|+|++.||+ |+|||+.... . .....+..+ ..
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~---------i~iw~~~~~~-------~-~~~~~~~~h--~~ 87 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAND---------VRCWEVQDSG-------Q-TIPKAQQMH--TG 87 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSE---------EEEEEECTTS-------C-EEEEEEEEC--SS
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCc---------EEEEEcCCCC-------c-eeEEEeccc--cC
Confidence 345667788999999999999998 699999999998 9999998421 1 122444433 34
Q ss_pred CCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEE--eecCCeEEEEEEc-CCeEE
Q 037368 129 PEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGF--RVDGQALQLFAVT-PNSVI 205 (823)
Q Consensus 129 p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~f--s~dg~~~~l~~~t-~~~V~ 205 (823)
+ |++++|+|+++. +|+|+.||.|++|+.. ..+......+.++|++++| ++++ ..+++++ ++.|+
T Consensus 88 ~---v~~~~~~~~~~~---l~s~~~dg~v~iwd~~-----~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 88 P---VLDVCWSDDGSK---VFTASCDKTAKMWDLS-----SNQAIQIAQHDAPVKTIHWIKAPNY--SCVMTGSWDKTLK 154 (368)
T ss_dssp C---EEEEEECTTSSE---EEEEETTSEEEEEETT-----TTEEEEEEECSSCEEEEEEEECSSC--EEEEEEETTSEEE
T ss_pred C---EEEEEECcCCCE---EEEEcCCCcEEEEEcC-----CCCceeeccccCceEEEEEEeCCCC--CEEEEccCCCcEE
Confidence 4 999999999999 9999999999999863 1223334567889999999 7776 4555554 56799
Q ss_pred EEEecCCCCcceEEccCCCccceecccCCCeEEEeeCCeEEEEecCCCCccc-cc----cCCeE--EEEeeCc----EEE
Q 037368 206 LFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPCW-AF----EGEKK--LLGWFRG----YLL 274 (823)
Q Consensus 206 ~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~~~-~~----~g~~~--~i~~~~~----ylv 274 (823)
+||+.... +...+..+. .+.++.+.++..++.+.++.+.+|+.+...... .. ..... .+.+... .++
T Consensus 155 vwd~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 155 FWDTRSSN-PMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp EECSSCSS-CSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred EEECCCCc-EEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 99997543 455565433 344555555544455566799999987543221 11 11122 2222222 255
Q ss_pred EEEecCCCCccEEEEEeCCCCE-----EEEecccc------------ceeEE-EeecCcEEEEEcCCeEEEEeecC
Q 037368 275 CVIADQRNSKNIFNVYDLKNRL-----IAHSLVVK------------EVSHM-LCEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 275 ~~s~d~~~~~~~I~I~D~~~~~-----i~~~~~i~------------~v~~v-~~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
+++ .++.|+|||+.... ..+..+-. .+..+ +++++.+++.++.+..++++...
T Consensus 233 ~~~-----~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 233 LGS-----IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp EEE-----TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred Eec-----CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 555 46899999997641 12222211 24444 66777766666555556666443
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.69 E-value=2.2e-15 Score=160.19 Aligned_cols=178 Identities=9% Similarity=0.063 Sum_probs=120.4
Q ss_pred cCCeEEEEc--CCCeeeEeEeecccceeEEEEec---CCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCce
Q 037368 43 DDGAVSLLD--RGLKFNFGFQAHSSSVLFLQQLK---QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDC 117 (823)
Q Consensus 43 ~dG~i~~~d--~~~~~~~~~~~H~~~V~~i~~~~---~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~ 117 (823)
+|+.|++|+ ++|+.+.++.+|+..|..++|++ ++..|||+|.|++ |||||+.+ .++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~T---------IkIWDl~T----------Gk~ 215 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNN---------IVIWNLKT----------GQL 215 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSE---------EEEEETTT----------CCE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCc---------EEEEECCC----------CcE
Confidence 499999999 66888889999999999999999 7799999999998 99999984 347
Q ss_pred EEEEEeccCCCCCCceEEEEEecCCCCcce---------EEEEEeCCeEEEEEcccccccccceeEEe-----cCCCCcc
Q 037368 118 IGILRVFTSQFPEAKITSFLVLEEAPPILL---------IAIGLDNGCIYCIKGDIARERITRFKLQV-----DNQCSVM 183 (823)
Q Consensus 118 ~~~~~~~~~~~p~~~v~~va~~~d~~~~~~---------ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-----~~~~~It 183 (823)
++++..+. .+. ..+.+++|+||+....+ +|+|+.|++|++|+.. .+....++. .+.+.+.
T Consensus 216 l~tL~g~~-~~v-~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~----tgk~l~v~~~~~p~Gh~~~~l 289 (356)
T 2w18_A 216 LKKMHIDD-SYQ-ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK----TTLSVGVMLYCLPPGQAGRFL 289 (356)
T ss_dssp EEEEECCC-----CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT----TTEEEEEEEECCCTTCCCCEE
T ss_pred EEEEcCCC-cce-eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC----CCEEEEEEEeeccCCCcceeE
Confidence 88876432 111 23888999999976100 2678889999999863 221122221 1122333
Q ss_pred eEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEccCCCccc-eecccCCCeEEE-ee-CCeEEEEec
Q 037368 184 GLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLDNIGCSTN-SVAMSDRLELII-GR-PEAVYFYEV 250 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~~~~~~~~-~~~~s~~~~liv-~~-~~~I~i~~~ 250 (823)
+.+++ + ..++++ .+++|++||+..+ ....++.+|...+. +++|+|||++++ |+ |++|++|+.
T Consensus 290 sg~~s--g--~~lASgS~DgTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 290 EGDVK--D--HCAAAILTSGTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEE--T--TEEEEEETTSCEEEEETTTC-SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ccccC--C--CEEEEEcCCCcEEEEECCCC-cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 33333 4 245555 4667999999764 46677877765554 589999998654 44 459999985
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.68 E-value=1.6e-14 Score=159.49 Aligned_cols=233 Identities=13% Similarity=0.060 Sum_probs=160.9
Q ss_pred CCCCeEEEeeC-C-CEE-EEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEE-EEecCCCCcccccceeEE
Q 037368 24 VSGNITCCSSG-R-GKV-VIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLV-TVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 24 ~~~~is~~~~~-~-~~l-~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~-s~s~D~~~~~~~~~~~vk 98 (823)
.+..+.|++.+ + .++ ++|+.+|+|++|| .+++.++.+..|. .|.+++|+|+|+.|+ +++.|++ |+
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~---------v~ 99 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASST---------LS 99 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTE---------EE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCE---------EE
Confidence 34557777764 3 355 6777999999999 6888888887666 999999999999875 5556676 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceE-EEEEeCCeEEEEEcccccccccceeEEec
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI-AIGLDNGCIYCIKGDIARERITRFKLQVD 177 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i-a~G~~dG~V~l~~~~~~~~~~~k~~~~~~ 177 (823)
+||+... .++..+..+ ..+.+++|+|+++. + ++++.+|.|.+|+.. ..+......
T Consensus 100 v~d~~~~----------~~~~~~~~~------~~~~~~~~s~dg~~---l~~~~~~~~~v~~~d~~-----~~~~~~~~~ 155 (391)
T 1l0q_A 100 VIDTTSN----------TVAGTVKTG------KSPLGLALSPDGKK---LYVTNNGDKTVSVINTV-----TKAVINTVS 155 (391)
T ss_dssp EEETTTT----------EEEEEEECS------SSEEEEEECTTSSE---EEEEETTTTEEEEEETT-----TTEEEEEEE
T ss_pred EEECCCC----------eEEEEEeCC------CCcceEEECCCCCE---EEEEeCCCCEEEEEECC-----CCcEEEEEe
Confidence 9999842 245454422 23899999999987 6 678889999999863 122222233
Q ss_pred CCCCcceEEEeecCCeEEEE-EEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEee----CCeEEEEec
Q 037368 178 NQCSVMGLGFRVDGQALQLF-AVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGR----PEAVYFYEV 250 (823)
Q Consensus 178 ~~~~It~l~fs~dg~~~~l~-~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~----~~~I~i~~~ 250 (823)
....+.+++|+++|+ .++ ++. ++.|++||+.+.. ....+. ++..+.+++|+|+|+. +++. ++.|++|++
T Consensus 156 ~~~~~~~~~~~~dg~--~l~~~~~~~~~v~~~d~~~~~-~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGT--KVYVANFDSMSISVIDTVTNS-VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp CCSSEEEEEECTTSS--EEEEEETTTTEEEEEETTTTE-EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred cCCCcceEEECCCCC--EEEEEeCCCCEEEEEECCCCe-EEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 345679999999985 443 333 4569999987542 334443 4456788999998864 4443 468999998
Q ss_pred CCCCccccccCC--eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE
Q 037368 251 DGRGPCWAFEGE--KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA 298 (823)
Q Consensus 251 ~g~~~~~~~~g~--~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~ 298 (823)
........++++ +..+.+ .+.++++... .+++|++||+.++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~----~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 232 GTNKITARIPVGPDPAGIAVTPDGKKVYVALS----FXNTVSVIDTATNTIT 279 (391)
T ss_dssp TTTEEEEEEECCSSEEEEEECTTSSEEEEEET----TTTEEEEEETTTTEEE
T ss_pred CCCeEEEEEecCCCccEEEEccCCCEEEEEcC----CCCEEEEEECCCCcEE
Confidence 743322233332 444555 4667755543 4689999999876543
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.67 E-value=4.9e-15 Score=165.95 Aligned_cols=228 Identities=12% Similarity=0.050 Sum_probs=159.9
Q ss_pred CeEEEeeC-C-CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEE-EEecCCCCcccccceeEEEEeC
Q 037368 27 NITCCSSG-R-GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLV-TVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 27 ~is~~~~~-~-~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~-s~s~D~~~~~~~~~~~vkvWdl 102 (823)
.|.+++.+ + ..+++|+.||.|++|| .+++.+.++.+|...|.+++++|+++.++ +++.|++ |++||+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------i~~~d~ 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISED---------ISVIDR 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE---------EEEEET
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc---------EEEEEC
Confidence 46666663 3 4678899999999999 77788889999999999999999999885 5557887 999999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE--------eCCeEEEEEcccccccccceeE
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL--------DNGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~--------~dG~V~l~~~~~~~~~~~k~~~ 174 (823)
... .++..+.. . ..+.+++|+|+++. +++++ .||.|++|+.. ..+...
T Consensus 242 ~~~----------~~~~~~~~---~---~~~~~~~~~~~g~~---l~~~~~~~~~~~~~dg~i~~~d~~-----~~~~~~ 297 (433)
T 3bws_A 242 KTK----------LEIRKTDK---I---GLPRGLLLSKDGKE---LYIAQFSASNQESGGGRLGIYSMD-----KEKLID 297 (433)
T ss_dssp TTT----------EEEEECCC---C---SEEEEEEECTTSSE---EEEEEEESCTTCSCCEEEEEEETT-----TTEEEE
T ss_pred CCC----------cEEEEecC---C---CCceEEEEcCCCCE---EEEEECCCCccccCCCeEEEEECC-----CCcEEe
Confidence 742 23433321 1 23899999999998 88887 48899999863 112222
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEeeC----------
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGRP---------- 242 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~~---------- 242 (823)
.....+.+++++|+|+|+ .++++++ ++.|.+|++.+.. ....+. ++..+.+++|+|+|++ +++..
T Consensus 298 ~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~v~v~d~~~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 374 (433)
T 3bws_A 298 TIGPPGNKRHIVSGNTEN-KIYVSDMCCSKIEVYDLKEKK-VQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYL 374 (433)
T ss_dssp EEEEEECEEEEEECSSTT-EEEEEETTTTEEEEEETTTTE-EEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTT
T ss_pred eccCCCCcceEEECCCCC-EEEEEecCCCEEEEEECCCCc-EEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccc
Confidence 233345789999999985 3334433 5679999997532 334444 5566789999999974 44443
Q ss_pred ------CeEEEEecCCCCccccccC--CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 243 ------EAVYFYEVDGRGPCWAFEG--EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 243 ------~~I~i~~~~g~~~~~~~~g--~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+.|++|+.........+.+ ....++| .+.++++.+. .+++|+||++++
T Consensus 375 ~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~d~~i~v~~~~~ 432 (433)
T 3bws_A 375 KKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDF----LDHQIRVYRRDG 432 (433)
T ss_dssp SCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEET----TTTEEEEEEETT
T ss_pred cccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEEC----CCCeEEEEEecC
Confidence 3899999864322222332 3455555 5678877653 368999999864
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.66 E-value=1.6e-14 Score=161.59 Aligned_cols=227 Identities=10% Similarity=0.061 Sum_probs=155.0
Q ss_pred CCEEEEEecC------CeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCC
Q 037368 35 RGKVVIGCDD------GAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 35 ~~~l~~gs~d------G~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
++.+++++.+ ++|++||.++...+.+.+|...|.+++|+|+|+.|++++.|+. .+. |++||+...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~--~~~----i~~~d~~tg--- 213 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG--RSA----LVIQTLANG--- 213 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTS--SCE----EEEEETTTC---
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCC--CcE----EEEEECCCC---
Confidence 4567766654 7999999667667789999999999999999999999998851 011 999999842
Q ss_pred CCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEE-EEEeCCe--EEEEEcccccccccceeEEecCCCCcceE
Q 037368 109 GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIA-IGLDNGC--IYCIKGDIARERITRFKLQVDNQCSVMGL 185 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia-~G~~dG~--V~l~~~~~~~~~~~k~~~~~~~~~~It~l 185 (823)
. +. .+..+ . ..+.+++|+||++. +| +++.+|. |.+|+.. ..+...+..+...++++
T Consensus 214 -----~--~~-~l~~~--~---~~~~~~~~spdg~~---la~~~~~~g~~~i~~~d~~-----~~~~~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 214 -----A--VR-QVASF--P---RHNGAPAFSPDGSK---LAFALSKTGSLNLYVMDLA-----SGQIRQVTDGRSNNTEP 272 (415)
T ss_dssp -----C--EE-EEECC--S---SCEEEEEECTTSSE---EEEEECTTSSCEEEEEETT-----TCCEEECCCCSSCEEEE
T ss_pred -----c--EE-EeecC--C---CcccCEEEcCCCCE---EEEEEecCCCceEEEEECC-----CCCEEeCcCCCCcccce
Confidence 2 32 23312 2 23999999999998 88 5555665 7777752 22334445556789999
Q ss_pred EEeecCCeEEEEEEcCC---eEEEEEecCCCCcceEEccCCCccceecccCCCeEEE-ee-C---CeEEEEecCCCCccc
Q 037368 186 GFRVDGQALQLFAVTPN---SVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GR-P---EAVYFYEVDGRGPCW 257 (823)
Q Consensus 186 ~fs~dg~~~~l~~~t~~---~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~---~~I~i~~~~g~~~~~ 257 (823)
+|+|||+ .+++++..+ .|++|++.+.. ...+..++..+.+++|+|+|++++ +. + ..|++|++++.. +.
T Consensus 273 ~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~-~~ 348 (415)
T 2hqs_A 273 TWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-VQ 348 (415)
T ss_dssp EECTTSS-EEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-EE
T ss_pred EECCCCC-EEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC-EE
Confidence 9999995 344444433 58888886542 234444566677889999998654 33 2 379999987432 22
Q ss_pred cccC--CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 258 AFEG--EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 258 ~~~g--~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
.+.+ ....++| .+.+|+..+.+. ....|.+||+.++..
T Consensus 349 ~l~~~~~~~~~~~spdg~~l~~~s~~~--~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 349 VLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 390 (415)
T ss_dssp ECCCSSSCEEEEECTTSSEEEEEEEET--TEEEEEEEETTSCCE
T ss_pred EecCCCCcCCeEEcCCCCEEEEEEcCC--CccEEEEEECCCCcE
Confidence 2322 2334444 577888877542 234899999987654
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.64 E-value=4.5e-15 Score=164.87 Aligned_cols=211 Identities=10% Similarity=-0.002 Sum_probs=136.0
Q ss_pred CeEEEeeC----------CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCC-CEEEEEecCCCCcccccc
Q 037368 27 NITCCSSG----------RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQR-NFLVTVGEDEQVSAQQSA 94 (823)
Q Consensus 27 ~is~~~~~----------~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~-~~l~s~s~D~~~~~~~~~ 94 (823)
.|+++++. +..|++|+.|++|++|| .++.....+.+|...|.+++|+|++ ++|+|++.|++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~------- 210 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN------- 210 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE-------
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE-------
Confidence 48877764 24789999999999999 6677777888999999999999987 58999999998
Q ss_pred eeEEEEeCCCCCCCCCC-----CCCCceEEEEEec------cCCCCCCceEEEEEe-cCCCCcceEEEEEeCCeEEEEEc
Q 037368 95 VCLKVFDLDKMEPEGTS-----STSPDCIGILRVF------TSQFPEAKITSFLVL-EEAPPILLIAIGLDNGCIYCIKG 162 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~-----~~~~~~~~~~~~~------~~~~p~~~v~~va~~-~d~~~~~~ia~G~~dG~V~l~~~ 162 (823)
|++||+......... .....+. ..... ........+.+++|+ ||+.. +++|+.||+|++|+.
T Consensus 211 --v~~wd~~t~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~---l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 211 --IRIFDWTLNLSAEENSQTELVKNPWLL-TLNTLPLVNTCHSSGIASSLANVRWIGSDGSG---ILAMCKSGAWLRWNL 284 (393)
T ss_dssp --EEEEETTCCC----------CSCCCSE-EEESGGGC------CCSSSCSEEEEETTTTCE---EEEECTTSEEEEEEC
T ss_pred --EEEEECCCCcccccccccCCcccceEE-ecccccceeeeecccccccceeeeeecCCCCE---EEEEeCCCCEEEEEC
Confidence 999999864311000 0000011 10000 000011348899987 89999 999999999999985
Q ss_pred ccccccc---------------cceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCcc
Q 037368 163 DIARERI---------------TRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCST 226 (823)
Q Consensus 163 ~~~~~~~---------------~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~ 226 (823)
...+... +..+.. .....+.+..|.+.....++++++ ++.|++||+.... ....+..++.++
T Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~~~~~~V 362 (393)
T 4gq1_A 285 FANNDYNEISDSTMKLGPKNLLPNVQGI-SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIPIQLGMPI 362 (393)
T ss_dssp -------------------CCSCSEEEE-CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEEEECSSCE
T ss_pred ccCCCCceEeeecCccccEEEccccccc-cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEecCCCCcE
Confidence 3111000 000000 111223333444432114455555 4579999987543 445555677889
Q ss_pred ceecccCCCeE-EEeeCCeEEEEecCC
Q 037368 227 NSVAMSDRLEL-IIGRPEAVYFYEVDG 252 (823)
Q Consensus 227 ~~~~~s~~~~l-iv~~~~~I~i~~~~g 252 (823)
.+++|+|||++ +++.++++.+|.+.|
T Consensus 363 ~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 363 VDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp EEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 99999999985 567788999998764
No 127
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.64 E-value=2.5e-14 Score=156.55 Aligned_cols=194 Identities=9% Similarity=0.108 Sum_probs=126.9
Q ss_pred CCCeEEEeeCC--CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEE
Q 037368 25 SGNITCCSSGR--GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 25 ~~~is~~~~~~--~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvW 100 (823)
...|.|+++++ ..|++|+.+| +++|+ ..++.. +..+...+..+.+.++++.+ ++++.|++ |+||
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---------v~iW 86 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI--MSQEMRHLSKVRMLHRTNYVAFVTGVKEV---------VHIW 86 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE--EEEECSCCCEEEECTTSSEEEEECSSTTE---------EEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee--eeeecCCeEEEEEcCCCCEEEEEECCccE---------EEEE
Confidence 45688887753 4678887665 78999 555544 33333458888888888887 45667776 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC-----------------------------------CCc
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA-----------------------------------PPI 145 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~-----------------------------------~~~ 145 (823)
|+.+. .++.++.. ..+ |.+++++++. ..
T Consensus 87 d~~~~----------~~~~~~~~---~~~---v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~- 149 (355)
T 3vu4_A 87 DDVKK----------QDVSRIKV---DAP---VKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGL- 149 (355)
T ss_dssp ETTTT----------EEEEEEEC---SSC---EEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTE-
T ss_pred ECCCC----------cEEEEEEC---CCc---eEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccE-
Confidence 99743 23444331 112 5666655542 12
Q ss_pred ceEEE--EEeCCeEEEEEccccc-----ccc-------cceeEEecCCCCcceEEEeecCCeEEEEEEc-CCe-EEEEEe
Q 037368 146 LLIAI--GLDNGCIYCIKGDIAR-----ERI-------TRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNS-VILFSL 209 (823)
Q Consensus 146 ~~ia~--G~~dG~V~l~~~~~~~-----~~~-------~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~-V~~~d~ 209 (823)
+|+ |+.+|.|++|+..-.. +.. ++...+..+.++|++++|+|+|+ .|++++ ++. |++||+
T Consensus 150 --la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~--~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 150 --LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD--MVATCSQDGTIIRVFKT 225 (355)
T ss_dssp --EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS--EEEEEETTCSEEEEEET
T ss_pred --EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC--EEEEEeCCCCEEEEEEC
Confidence 333 5677788888753100 000 01344556788999999999994 555554 566 999999
Q ss_pred cCCCCcceEEc-c-CCCccceecccCCCeEE-Eee-CCeEEEEecCC
Q 037368 210 QNQPPKRQFLD-N-IGCSTNSVAMSDRLELI-IGR-PEAVYFYEVDG 252 (823)
Q Consensus 210 ~~~~~~~~~l~-~-~~~~~~~~~~s~~~~li-v~~-~~~I~i~~~~g 252 (823)
... .....+. + |...+.+++|+|+|.++ +++ ++.|++|+++.
T Consensus 226 ~~~-~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 226 EDG-VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp TTC-CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCC-cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 754 3556665 4 88889999999999855 444 45899999863
No 128
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.62 E-value=2.3e-14 Score=156.78 Aligned_cols=232 Identities=9% Similarity=0.026 Sum_probs=147.5
Q ss_pred CCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCc
Q 037368 53 GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAK 132 (823)
Q Consensus 53 ~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 132 (823)
..+++.++++|...|++++|+|+|++|+++++|+ ++|||+... .+..... + ..
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~----------~~iw~~~~~----------~~~~~~~-~---~~--- 60 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS----------FEIYNVHPV----------AHIMSQE-M---RH--- 60 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE----------EEEEEETTE----------EEEEEEE-C---SC---
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE----------EEEEecCCc----------ceeeeee-c---CC---
Confidence 3455667889999999999999999999998886 899998732 1222211 1 12
Q ss_pred eEEEEEecCCCCcceE-EEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecC
Q 037368 133 ITSFLVLEEAPPILLI-AIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQN 211 (823)
Q Consensus 133 v~~va~~~d~~~~~~i-a~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~ 211 (823)
+..+++.++++. + ++|+.+++|++|+.. .+ +.....+..++|.++.|++++ ++++.++.|++|++..
T Consensus 61 ~~~~~~~~~~~~---~~~~~~~d~~v~iWd~~----~~-~~~~~~~~~~~v~~v~~~~~~----~~~~~~~~i~i~d~~~ 128 (355)
T 3vu4_A 61 LSKVRMLHRTNY---VAFVTGVKEVVHIWDDV----KK-QDVSRIKVDAPVKDLFLSREF----IVVSYGDVISVFKFGN 128 (355)
T ss_dssp CCEEEECTTSSE---EEEECSSTTEEEEEETT----TT-EEEEEEECSSCEEEEEECSSE----EEEEETTEEEEEESST
T ss_pred eEEEEEcCCCCE---EEEEECCccEEEEEECC----CC-cEEEEEECCCceEEEEEcCCE----EEEEEcCEEEEEECCC
Confidence 788888888776 6 467778999999863 12 222223456799999998763 5667788999999976
Q ss_pred CCCcceEEccCCCccceecccCCCeEEEe---eCCeEEEEecCCCC---------------c-cccccCC---eEEEEe-
Q 037368 212 QPPKRQFLDNIGCSTNSVAMSDRLELIIG---RPEAVYFYEVDGRG---------------P-CWAFEGE---KKLLGW- 268 (823)
Q Consensus 212 ~~~~~~~l~~~~~~~~~~~~s~~~~liv~---~~~~I~i~~~~g~~---------------~-~~~~~g~---~~~i~~- 268 (823)
.......+.. +...+++++ +.++++ .++.|++|++.... + ...+.+| ...++|
T Consensus 129 ~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 129 PWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp TCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred CceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 4223333332 334556667 556654 24689999987432 1 3345565 344555
Q ss_pred -eCcEEEEEEecCCCCccE-EEEEeCCCCEEEE--e-c-cccceeEE-EeecCcEEEEEcCCeEEEEeecC
Q 037368 269 -FRGYLLCVIADQRNSKNI-FNVYDLKNRLIAH--S-L-VVKEVSHM-LCEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 269 -~~~ylv~~s~d~~~~~~~-I~I~D~~~~~i~~--~-~-~i~~v~~v-~~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
.+.++++++. |++ |+|||+.++.... . . +-..+..+ |++++..++.++.+..++++...
T Consensus 205 ~~g~~l~s~s~-----d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 205 RKSDMVATCSQ-----DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp TTSSEEEEEET-----TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CCCCEEEEEeC-----CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 5678888874 588 9999998654333 2 1 33335555 77888888877777677777543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.60 E-value=1.5e-13 Score=153.78 Aligned_cols=252 Identities=14% Similarity=0.093 Sum_probs=162.7
Q ss_pred CEEEEEe----cCC----eEEEEcC---CCeee--EeEeecccceeEEEEec--------------CCCEEEEEecCCCC
Q 037368 36 GKVVIGC----DDG----AVSLLDR---GLKFN--FGFQAHSSSVLFLQQLK--------------QRNFLVTVGEDEQV 88 (823)
Q Consensus 36 ~~l~~gs----~dG----~i~~~d~---~~~~~--~~~~~H~~~V~~i~~~~--------------~~~~l~s~s~D~~~ 88 (823)
..+++|+ .+| +|++||. +++.+ .++.+|...|..+++.+ .+..++.++.++.+
T Consensus 76 ~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~ 155 (415)
T 2hqs_A 76 DAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGG 155 (415)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSS
T ss_pred CEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCC
Confidence 4677886 468 9999996 56665 56899998888777654 16677777775210
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC---eEEEEEcccc
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG---CIYCIKGDIA 165 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG---~V~l~~~~~~ 165 (823)
.. .-.|++||++.. +.+.+..+ ..+ +.+++|+||++. +|+++.++ .|++|+..
T Consensus 156 ~~---~~~i~i~d~~g~-----------~~~~l~~~--~~~---v~~~~~Spdg~~---la~~s~~~~~~~i~~~d~~-- 211 (415)
T 2hqs_A 156 QF---PYELRVSDYDGY-----------NQFVVHRS--PQP---LMSPAWSPDGSK---LAYVTFESGRSALVIQTLA-- 211 (415)
T ss_dssp SC---CEEEEEEETTSC-----------SCEEEEEE--SSC---EEEEEECTTSSE---EEEEECTTSSCEEEEEETT--
T ss_pred Cc---cceEEEEcCCCC-----------CCEEEeCC--CCc---ceeeEEcCCCCE---EEEEEecCCCcEEEEEECC--
Confidence 00 001999999742 23344322 234 999999999999 99998875 99999863
Q ss_pred cccccceeEEecCCCCcceEEEeecCCeEEEEEEcC---CeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEee
Q 037368 166 RERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTP---NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGR 241 (823)
Q Consensus 166 ~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~ 241 (823)
..+...+..+.+.+.+++|+|||+ .++++++. ..|++||+.+.. ...+..+...+.+++|+|||+. ++++
T Consensus 212 ---tg~~~~l~~~~~~~~~~~~spdg~-~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 212 ---NGAVRQVASFPRHNGAPAFSPDGS-KLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp ---TCCEEEEECCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred ---CCcEEEeecCCCcccCEEEcCCCC-EEEEEEecCCCceEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEE
Confidence 223344555677899999999995 34445543 249999987642 3455556667788999999984 4444
Q ss_pred C-C---eEEEEecCCCCcc-ccccCC-eEEEE--eeCcEEEEEEecCCCCccEEEEEeCCCCEEE-EeccccceeEE-Ee
Q 037368 242 P-E---AVYFYEVDGRGPC-WAFEGE-KKLLG--WFRGYLLCVIADQRNSKNIFNVYDLKNRLIA-HSLVVKEVSHM-LC 311 (823)
Q Consensus 242 ~-~---~I~i~~~~g~~~~-~~~~g~-~~~i~--~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~i~~v~~v-~~ 311 (823)
+ + .|++|++.+.... +...+. ...+. +.+.+|+..+.+. .+.+|.+||+.++... ..... .+..+ ++
T Consensus 286 ~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~--g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~s 362 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG--GQQHIAKQDLATGGVQVLSSTF-LDETPSLA 362 (415)
T ss_dssp CTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS--SCEEEEEEETTTCCEEECCCSS-SCEEEEEC
T ss_pred CCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC--CceEEEEEECCCCCEEEecCCC-CcCCeEEc
Confidence 3 2 6888888753221 222222 23344 4678888877542 2479999999875442 22221 23332 66
Q ss_pred ecCcEEEEE
Q 037368 312 EWGNIILVM 320 (823)
Q Consensus 312 ~~~~~~vvs 320 (823)
++|..++.+
T Consensus 363 pdg~~l~~~ 371 (415)
T 2hqs_A 363 PNGTMVIYS 371 (415)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 677654443
No 130
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.58 E-value=2.3e-13 Score=144.64 Aligned_cols=214 Identities=11% Similarity=-0.002 Sum_probs=129.6
Q ss_pred EEEEecCCeEEEEc-CCC---eeeEeEeecccceeEEEE-------------------------ecC----CCEEEEEec
Q 037368 38 VVIGCDDGAVSLLD-RGL---KFNFGFQAHSSSVLFLQQ-------------------------LKQ----RNFLVTVGE 84 (823)
Q Consensus 38 l~~gs~dG~i~~~d-~~~---~~~~~~~~H~~~V~~i~~-------------------------~~~----~~~l~s~s~ 84 (823)
++++ ....|++|+ .++ +.+++|+.|+.+|.+|.+ +|+ +++++++|.
T Consensus 57 ~~~~-~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 57 IITA-CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN 135 (356)
T ss_dssp EEEE-ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE
T ss_pred EEEe-ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC
Confidence 4444 467899999 555 889999999876665555 456 667777664
Q ss_pred --------------------CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec---C
Q 037368 85 --------------------DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE---E 141 (823)
Q Consensus 85 --------------------D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~---d 141 (823)
|++ |++|++... .+.+.++..+. ..++.++|+| +
T Consensus 136 ~~~v~~l~~g~lv~ss~~g~d~~---------V~~~~~s~d---------G~~~~s~~~~~-----~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 136 IKAVLGLTKRRLVSSSGTLSDQQ---------VEVMTFAED---------GGGKENQFLMP-----PEETILTFAEVQGM 192 (356)
T ss_dssp EEEEEEETTTEEEEEESSSTTCE---------EEEEEECTT---------SCEEEEEEECC-----CSSCEEEEEEEETS
T ss_pred eEEEEecCCCcEEEecccCCCCc---------EEEEEECCC---------CceeeeeccCC-----CceeeEEeeccCCC
Confidence 333 666666421 12344444332 2277888888 6
Q ss_pred CCCcceEEEEEeCCeEEEEEcccccccccceeEEecC---CCCcceEEEeecCCeEEEEE------------Ec-CCeEE
Q 037368 142 APPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDN---QCSVMGLGFRVDGQALQLFA------------VT-PNSVI 205 (823)
Q Consensus 142 ~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~---~~~It~l~fs~dg~~~~l~~------------~t-~~~V~ 205 (823)
+.. +|+|+.|++|++|+.. .+...+++..+ ...|.+++|+|+|+ .+++ ++ +.+|+
T Consensus 193 ~~~---LaSgS~D~TIkIWDl~----TGk~l~tL~g~~~~v~~v~~vafSpdG~--~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 193 QEA---LLGTTIMNNIVIWNLK----TGQLLKKMHIDDSYQASVCHKAYSEMGL--LFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp TTE---EEEEETTSEEEEEETT----TCCEEEEEECCC---CCCEEEEEEETTE--EEEEEC------------CCEEEE
T ss_pred Cce---EEEecCCCcEEEEECC----CCcEEEEEcCCCcceeeeEEEEECCCCC--EEEEeccCCCcceeeccCCCcEEE
Confidence 678 9999999999999864 23334455433 23577889999983 3322 22 34599
Q ss_pred EEEecCCCCcceEE-----ccCCCccceecccCCCeEEE-ee-CCeEEEEecCCCCccccccCCe----EE--EEeeCcE
Q 037368 206 LFSLQNQPPKRQFL-----DNIGCSTNSVAMSDRLELII-GR-PEAVYFYEVDGRGPCWAFEGEK----KL--LGWFRGY 272 (823)
Q Consensus 206 ~~d~~~~~~~~~~l-----~~~~~~~~~~~~s~~~~liv-~~-~~~I~i~~~~g~~~~~~~~g~~----~~--i~~~~~y 272 (823)
+|+..+.. ...++ ++|...+.+.. .++.+++ ++ |++|++||+........++||. .. +++++.+
T Consensus 264 lWd~~tgk-~l~v~~~~~p~Gh~~~~lsg~--~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 264 VINPKTTL-SVGVMLYCLPPGQAGRFLEGD--VKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp EEETTTTE-EEEEEEECCCTTCCCCEEEEE--EETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE
T ss_pred EEECCCCE-EEEEEEeeccCCCcceeEccc--cCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE
Confidence 99986432 22222 23322221112 2244444 43 5699999998433234566652 23 4446779
Q ss_pred EEEEEecCCCCccEEEEEeC
Q 037368 273 LLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 273 lv~~s~d~~~~~~~I~I~D~ 292 (823)
|++++ .|++|+|||+
T Consensus 341 LaSGS-----~D~TIklWd~ 355 (356)
T 2w18_A 341 LLAGQ-----KDGNIFVYHY 355 (356)
T ss_dssp EEEEC-----TTSCEEEEEE
T ss_pred EEEEE-----CCCcEEEecC
Confidence 98887 4689999985
No 131
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.58 E-value=1.1e-12 Score=158.81 Aligned_cols=387 Identities=16% Similarity=0.184 Sum_probs=265.6
Q ss_pred hHHHHHHHHHhccHHHHHHHHHhcCCCHH----------------------HHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 333 MESKLDMLFKKNLYTVAINLVQSQQADAA----------------------ATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 333 ~~~~i~~L~~~~~f~~Al~la~~~~~~~~----------------------~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
.++.-..+.+.++|++|..+-++.+.... ....++-++|..+.+.|+|++|++.|+++
T Consensus 1052 ~~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA 1131 (1630)
T 1xi4_A 1052 APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA 1131 (1630)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 34445666677777777776655332111 12456778999999999999999999997
Q ss_pred hCCcChHHHHHHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHH
Q 037368 391 IGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVC 470 (823)
Q Consensus 391 i~~~eps~vI~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl 470 (823)
-.......|+.-+...++.+.+++||..-++....+. ..+-|..||.|+++.+.+..|++..+ .-+....=..|
T Consensus 1132 dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~-Idt~LafaYAKl~rleele~fI~~~n-----~ad~~~iGd~l 1205 (1630)
T 1xi4_A 1132 DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESY-VETELIFALAKTNRLAELEEFINGPN-----NAHIQQVGDRC 1205 (1630)
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccccc-ccHHHHHHHHhhcCHHHHHHHHhCCC-----HHHHHHHHHHH
Confidence 2222245688888899999999999987554332222 23457889999999999999997654 23445566678
Q ss_pred HhcCCHHHHHHHHHHhCChHHHHHHHHHhhcCHHHHHHHHhcCChHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHhhcCC
Q 037368 471 RAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKP-METIDILLRLCTEDG 549 (823)
Q Consensus 471 ~~~g~~~~a~~la~~~~~~~~~l~il~~~~~~~~~al~yl~~l~~~~~~~~i~k~~~~Ll~~~p-~~~~~ll~~~~~~~~ 549 (823)
.+.|++++|..++.+-+.+......++.. ++|++|++..++-....++ .+.+...++..- ..+....+.+...
T Consensus 1206 e~eg~YeeA~~~Y~kA~ny~rLA~tLvkL-ge~q~AIEaarKA~n~~aW---kev~~acve~~Ef~LA~~cgl~Iiv~-- 1279 (1630)
T 1xi4_A 1206 YDEKMYDAAKLLYNNVSNFGRLASTLVHL-GEYQAAVDGARKANSTRTW---KEVCFACVDGKEFRLAQMCGLHIVVH-- 1279 (1630)
T ss_pred HhcCCHHHHHHHHHhhhHHHHHHHHHHHh-CCHHHHHHHHHHhCCHHHH---HHHHHHHhhhhHHHHHHHHHHhhhcC--
Confidence 89999999999999998998889999876 9999999999886555432 222211111100 0011111111000
Q ss_pred CCcccCCCCCcccCCCCCHHHHHhhhc--cCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccccccCCcccccCccc
Q 037368 550 ESTKRGASSSTYMSMLPSPVDFLNIFV--HHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGV 627 (823)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~f~--~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~~~~~~~~~~~~~~~ 627 (823)
.-....++..+. ++.++++.++|..+.-++ ....+++.|-.+|+.+ +
T Consensus 1280 ---------------~deLeeli~yYe~~G~feEAI~LlE~aL~Ler---aH~gmftELaiLyaKy---~---------- 1328 (1630)
T 1xi4_A 1280 ---------------ADELEELINYYQDRGYFEELITMLEAALGLER---AHMGMFTELAILYSKF---K---------- 1328 (1630)
T ss_pred ---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHhccCh---hHhHHHHHHHHHHHhC---C----------
Confidence 001224444444 357789999999886653 2568999999999987 2
Q ss_pred ccccccCCCCCCcccCCccccCCCCCCCCcchHHHHHHHHHHHhhcCCCCCCCCCCChhhHHHHHHhcCCchhHHHHHHH
Q 037368 628 DLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEK 707 (823)
Q Consensus 628 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~kll~~L~~~~~~~~~~~~Yd~~~aL~lc~~~~~~~~~v~L~~k 707 (823)
.+++++-++- +...-+...+++.|.....+.+.++||.+
T Consensus 1329 -----------------------------------peklmEhlk~------f~~rini~k~~r~~e~~~lW~elv~LY~~ 1367 (1630)
T 1xi4_A 1329 -----------------------------------PQKMREHLEL------FWSRVNIPKVLRAAEQAHLWAELVFLYDK 1367 (1630)
T ss_pred -----------------------------------HHHHHHHHHH------HHHhcccchHhHHHHHHHHHHHHHHHHHh
Confidence 2677777766 34456678899999999999999999999
Q ss_pred hccHHHHHHHHHhcCChhHHHH--HHHHhCCCCCCCCcchHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCChHHHHHH
Q 037368 708 LKLYKEVIACYTQAHDHEGLIA--CCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQT 785 (823)
Q Consensus 708 ~g~~~~al~~~~~~~d~~~~i~--~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~~~~i~~~L~~i~~~~~l~p~~vl~~ 785 (823)
-|.|+.|+..+++.-+ .|.+ ..+..- .+..+++|+-.++.||+...+ ..+..+|.-+.. .+++..++++
T Consensus 1368 ~~e~dnA~~tm~~h~~--~a~~~~~Fk~~i--~kv~n~elyykai~Fyl~~~P---~~lndLl~~l~~--rlD~~R~V~l 1438 (1630)
T 1xi4_A 1368 YEEYDNAIITMMNHPT--DAWKEGQFKDII--TKVANVELYYRAIQFYLEFKP---LLLNDLLMVLSP--RLDHTRAVNY 1438 (1630)
T ss_pred cccHHHHHHHHHhccH--hhhhhHHHHHHh--cccccHHHHHHHHHHHHhhCh---HHHHHHHHHhhh--cCChHHHHHH
Confidence 9999999988887421 1221 001100 012378999999999996533 346677775544 5899999999
Q ss_pred hcCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 037368 786 LSRNPCLTLSVIKDYIARKLEQESKLIEG 814 (823)
Q Consensus 786 l~~~~~~~~~~vk~~l~~~l~~~~~~i~~ 814 (823)
+.+... +..+|+|+...-.+.+..|++
T Consensus 1439 ~~~~~~--l~lik~yl~~vq~~n~~~Vne 1465 (1630)
T 1xi4_A 1439 FSKVKQ--LPLVKPYLRSVQNHNNKSVNE 1465 (1630)
T ss_pred HHHcCC--hHHhHHHHHHHHHhcchhhhH
Confidence 986665 778999998777665555543
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.56 E-value=1.3e-12 Score=151.15 Aligned_cols=249 Identities=11% Similarity=0.031 Sum_probs=161.9
Q ss_pred CEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCC
Q 037368 36 GKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTS 114 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~ 114 (823)
..+++++.+|+|.+|| .+++++.++..+.. +..+.++|+|++|++++.|++ |++||+... +
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~---------V~v~D~~~~--------t 211 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDAR---------IDMIDLWAK--------E 211 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSE---------EEEEETTSS--------S
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCe---------EEEEECcCC--------C
Confidence 3568888999999999 77899989984333 889999999999999999987 999999311 2
Q ss_pred CceEEEEEeccCCCCCCceEEEEEec----CCCCcceEEEEE-eCCeEEEEEcccccccccceeEEec-----------C
Q 037368 115 PDCIGILRVFTSQFPEAKITSFLVLE----EAPPILLIAIGL-DNGCIYCIKGDIARERITRFKLQVD-----------N 178 (823)
Q Consensus 115 ~~~~~~~~~~~~~~p~~~v~~va~~~----d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~~~~-----------~ 178 (823)
..++.++... ..+..++|+| |++. ++++. .+++|.+|+..- ......+.. .
T Consensus 212 ~~~~~~i~~g------~~p~~va~sp~~~~dg~~---l~v~~~~~~~v~v~D~~t----~~~~~~i~~~g~~~~~~~~~~ 278 (543)
T 1nir_A 212 PTKVAEIKIG------IEARSVESSKFKGYEDRY---TIAGAYWPPQFAIMDGET----LEPKQIVSTRGMTVDTQTYHP 278 (543)
T ss_dssp CEEEEEEECC------SEEEEEEECCSTTCTTTE---EEEEEEESSEEEEEETTT----CCEEEEEECCEECSSSCCEES
T ss_pred CcEEEEEecC------CCcceEEeCCCcCCCCCE---EEEEEccCCeEEEEeccc----cccceeecccCcccCcccccc
Confidence 3466676632 2379999999 9998 88887 489999998641 111222211 1
Q ss_pred CCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcc-eEEccCCCccceecccCCCeE-EEee--CCeEEEEecCCC
Q 037368 179 QCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKR-QFLDNIGCSTNSVAMSDRLEL-IIGR--PEAVYFYEVDGR 253 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~-~~l~~~~~~~~~~~~s~~~~l-iv~~--~~~I~i~~~~g~ 253 (823)
+..+.++.|++++. ..++... ++.|.+||........ ..+ .++..+..+.|+|+|++ +++. +++|.+||....
T Consensus 279 ~~~v~~i~~s~~~~-~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 279 EPRVAAIIASHEHP-EFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp CCCEEEEEECSSSS-EEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred CCceEEEEECCCCC-EEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 23688999999875 3333333 4579999987543222 133 35666778899999984 4443 469999998743
Q ss_pred Ccc-ccccC----Ce-EEEE---eeCcEEEEEEecCCCCccEEEEEeCCC-------CEEEEeccc--cceeEE-EeecC
Q 037368 254 GPC-WAFEG----EK-KLLG---WFRGYLLCVIADQRNSKNIFNVYDLKN-------RLIAHSLVV--KEVSHM-LCEWG 314 (823)
Q Consensus 254 ~~~-~~~~g----~~-~~i~---~~~~ylv~~s~d~~~~~~~I~I~D~~~-------~~i~~~~~i--~~v~~v-~~~~~ 314 (823)
.+ ..++. |+ .... +.+..+.+.+.. .+++|.|||..+ ..+..+... ..+.++ +++++
T Consensus 357 -~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~---~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg 432 (543)
T 1nir_A 357 -RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL---GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS 432 (543)
T ss_dssp -EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS---SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC
T ss_pred -eEEEeeccCCCCCCCCCcccCCCCCccEEEeccC---CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC
Confidence 33 22332 21 1222 222344333221 357999999976 233232222 223444 66777
Q ss_pred cEEEEEc
Q 037368 315 NIILVMT 321 (823)
Q Consensus 315 ~~~vvs~ 321 (823)
..++++.
T Consensus 433 ~~l~v~~ 439 (543)
T 1nir_A 433 SHLYVDT 439 (543)
T ss_dssp CEEEECC
T ss_pred CcEEEec
Confidence 7666654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=4.9e-13 Score=140.14 Aligned_cols=223 Identities=10% Similarity=-0.017 Sum_probs=143.8
Q ss_pred EEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC-CCCCCCCCCCCce
Q 037368 40 IGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK-MEPEGTSSTSPDC 117 (823)
Q Consensus 40 ~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~-~~~~~~~~~~~~~ 117 (823)
.++.+++|++|| .+++.. .+..|.+.|.+++|+|+|++|++++ ++. |.+||+.. . . +
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~---------i~~~d~~~~~--------~--~ 75 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGL---------LYRLSLAGDP--------S--P 75 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTE---------EEEEESSSCC--------S--C
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCe---------EEEEeCCCCC--------C--c
Confidence 346789999999 555544 6778999999999999999999987 555 99999984 3 2 1
Q ss_pred EEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE--eCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEE
Q 037368 118 IGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL--DNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQ 195 (823)
Q Consensus 118 ~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~--~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~ 195 (823)
..... ..+...+.+++|+||++. ++++. .++.+.+|..+. .+.+.+.+ ....++..++|+|+|+ .+
T Consensus 76 ~~~~~----~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~l~~~~~---~~~~~~~~-~~~~~~~~~~~spdg~-~l 143 (297)
T 2ojh_A 76 EKVDT----GFATICNNDHGISPDGAL---YAISDKVEFGKSAIYLLPS---TGGTPRLM-TKNLPSYWHGWSPDGK-SF 143 (297)
T ss_dssp EECCC----TTCCCBCSCCEECTTSSE---EEEEECTTTSSCEEEEEET---TCCCCEEC-CSSSSEEEEEECTTSS-EE
T ss_pred eEecc----ccccccccceEECCCCCE---EEEEEeCCCCcceEEEEEC---CCCceEEe-ecCCCccceEECCCCC-EE
Confidence 21111 111133889999999999 99998 446677775542 12222322 2344589999999995 34
Q ss_pred EEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeE-EEee--CCeEEEEecCC-CCccccccCC---eEEEE
Q 037368 196 LFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIGR--PEAVYFYEVDG-RGPCWAFEGE---KKLLG 267 (823)
Q Consensus 196 l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~~--~~~I~i~~~~g-~~~~~~~~g~---~~~i~ 267 (823)
++++. ++.+.+|+++........+..+...+.+++|+|+|+. +++. ++.+.+|..+- .+....+..+ ...+.
T Consensus 144 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 223 (297)
T 2ojh_A 144 TYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH 223 (297)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEE
T ss_pred EEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeE
Confidence 44443 4568888865333233444456667788999999974 4443 45677777642 2222233332 22334
Q ss_pred e--eCcEEEEEEecCCC------CccEEEEEeCCCC
Q 037368 268 W--FRGYLLCVIADQRN------SKNIFNVYDLKNR 295 (823)
Q Consensus 268 ~--~~~ylv~~s~d~~~------~~~~I~I~D~~~~ 295 (823)
| .+.+++.++.++.. ....|.+||+.++
T Consensus 224 ~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 224 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 4 57788888754211 2367999999875
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.54 E-value=5.2e-12 Score=135.72 Aligned_cols=224 Identities=8% Similarity=0.019 Sum_probs=148.9
Q ss_pred CCE-EEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEec-CCCCcccccceeEEEEeCCCCCCCCCC
Q 037368 35 RGK-VVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCLKVFDLDKMEPEGTS 111 (823)
Q Consensus 35 ~~~-l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~~~~~~~~~ 111 (823)
.+. +++++.+|.|.+|| .+++.+..+..+...+ .++++|+|+++++++. +++ |.+||+...
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~---------i~~~d~~~~------ 72 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQT---------LVQIETQLE------ 72 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCE---------EEEEECSSS------
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCe---------EEEEECCCC------
Confidence 344 57888999999999 6788887887777777 9999999997766665 665 999999743
Q ss_pred CCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC---eEEEEEcccccccccceeEEecCCCCcceEEEe
Q 037368 112 STSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG---CIYCIKGDIARERITRFKLQVDNQCSVMGLGFR 188 (823)
Q Consensus 112 ~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG---~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs 188 (823)
.. ....+... ..| ..+++|+||++. ++++..+| .|.+|+.. .+..... ........+++|+
T Consensus 73 --~~-~~~~~~~~--~~~---~~~~~~s~dg~~---l~~~~~~~~~~~i~v~d~~----~~~~~~~-~~~~~~~~~~~~s 136 (331)
T 3u4y_A 73 --PP-KVVAIQEG--QSS---MADVDITPDDQF---AVTVTGLNHPFNMQSYSFL----KNKFIST-IPIPYDAVGIAIS 136 (331)
T ss_dssp --SC-EEEEEEEC--SSC---CCCEEECTTSSE---EEECCCSSSSCEEEEEETT----TTEEEEE-EECCTTEEEEEEC
T ss_pred --ce-eEEecccC--CCC---ccceEECCCCCE---EEEecCCCCcccEEEEECC----CCCeEEE-EECCCCccceEEC
Confidence 21 14444432 234 445999999998 88666553 89999863 1222222 2334456899999
Q ss_pred ecCCeEEEEEE-c-CCe-EEEEEecCCCCc----ceEEccCCCccceecccCCCe-EEEee--CCeEEEEecCCCCc---
Q 037368 189 VDGQALQLFAV-T-PNS-VILFSLQNQPPK----RQFLDNIGCSTNSVAMSDRLE-LIIGR--PEAVYFYEVDGRGP--- 255 (823)
Q Consensus 189 ~dg~~~~l~~~-t-~~~-V~~~d~~~~~~~----~~~l~~~~~~~~~~~~s~~~~-liv~~--~~~I~i~~~~g~~~--- 255 (823)
|+|+ .++++ . ++. |.+|++...+.. ...+ ..+..+.+++|+|+|+ ++++. ++.|.+|++.....
T Consensus 137 pdg~--~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 137 PNGN--GLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp TTSS--CEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred CCCC--EEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce
Confidence 9995 34444 3 366 999998754422 1222 3455678899999997 44443 46899999874332
Q ss_pred cccccC--CeEE--EEeeCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 256 CWAFEG--EKKL--LGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 256 ~~~~~g--~~~~--i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
...++. .+.. +++.+.++++... .++.|.+||+.++.+
T Consensus 214 ~~~~~~~~~~~~~~~spdg~~l~v~~~----~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 214 LNAVGTNNLPGTIVVSRDGSTVYVLTE----STVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEEECS----SEEEEEEEETTTTEE
T ss_pred eeeccCCCCCceEEECCCCCEEEEEEc----CCCEEEEEECCCCce
Confidence 222222 2333 4445777766643 357899999987765
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=3.5e-12 Score=137.15 Aligned_cols=225 Identities=8% Similarity=0.040 Sum_probs=142.9
Q ss_pred CEEE-EEecCCeEEEEcC--CCe--eeEeEeecccceeEEEEecCCCEEEEEecC-CCCcccccceeEEEEeCCCCCCCC
Q 037368 36 GKVV-IGCDDGAVSLLDR--GLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVGED-EQVSAQQSAVCLKVFDLDKMEPEG 109 (823)
Q Consensus 36 ~~l~-~gs~dG~i~~~d~--~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D-~~~~~~~~~~~vkvWdl~~~~~~~ 109 (823)
++++ +++.+|.|++|+. +++ .+. ...|...+.+++|+|+|++|++++.+ ++ |++|+++..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~---------v~~~~~~~~---- 70 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQ-VVDVPGQVQPMVVSPDKRYLYVGVRPEFR---------VLAYRIAPD---- 70 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEE-EEECSSCCCCEEECTTSSEEEEEETTTTE---------EEEEEECTT----
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEee-eEecCCCCceEEECCCCCEEEEeecCCCe---------EEEEEecCC----
Confidence 3444 4478999999983 343 332 23577899999999999999888877 65 999999731
Q ss_pred CCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEcccccccccceeEEecCCCCcceEEEe
Q 037368 110 TSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFR 188 (823)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs 188 (823)
++....+..+... ..+.+++|+|+++. ++++. .+|.|.+|+.+ .....+..........+.+++|+
T Consensus 71 --~~~~~~~~~~~~~------~~~~~~~~s~dg~~---l~~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~s 137 (343)
T 1ri6_A 71 --DGALTFAAESALP------GSLTHISTDHQGQF---VFVGSYNAGNVSVTRLE--DGLPVGVVDVVEGLDGCHSANIS 137 (343)
T ss_dssp --TCCEEEEEEEECS------SCCSEEEECTTSSE---EEEEETTTTEEEEEEEE--TTEEEEEEEEECCCTTBCCCEEC
T ss_pred --CCceeeccccccC------CCCcEEEEcCCCCE---EEEEecCCCeEEEEECC--CCccccccccccCCCCceEEEEC
Confidence 1122233333321 12799999999997 76655 48899999863 00111111223345569999999
Q ss_pred ecCCeEEEEEE--cCCeEEEEEecCCCCcce----EE-ccCCCccceecccCCCe-EEEee--CCeEEEEecCCC-Ccc-
Q 037368 189 VDGQALQLFAV--TPNSVILFSLQNQPPKRQ----FL-DNIGCSTNSVAMSDRLE-LIIGR--PEAVYFYEVDGR-GPC- 256 (823)
Q Consensus 189 ~dg~~~~l~~~--t~~~V~~~d~~~~~~~~~----~l-~~~~~~~~~~~~s~~~~-liv~~--~~~I~i~~~~g~-~~~- 256 (823)
|+|+ .++++ .++.|.+|++...+.... .+ ...+..+.+++|+|+|+ ++++. ++.|.+|+.+.. +..
T Consensus 138 ~dg~--~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 138 PDNR--TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp TTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred CCCC--EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 9985 45555 357799999975332221 22 23455677899999997 44443 468999998632 211
Q ss_pred ----c-ccc-C-----CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 257 ----W-AFE-G-----EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 257 ----~-~~~-g-----~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
. .+. + ....+.| .+.++++... .++.|.+||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~----~~~~i~v~d~~ 261 (343)
T 1ri6_A 216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR----TASLITVFSVS 261 (343)
T ss_dssp EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET----TTTEEEEEEEC
T ss_pred EEeeccccCccccccCCccceEECCCCCEEEEEec----CCCEEEEEEEc
Confidence 0 111 1 1224555 4667765543 36899999997
No 136
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.47 E-value=6.2e-13 Score=145.69 Aligned_cols=373 Identities=16% Similarity=0.209 Sum_probs=185.2
Q ss_pred HHHHHHh-ccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHHHHhhchhhHHHHHHH
Q 037368 337 LDMLFKK-NLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNY 415 (823)
Q Consensus 337 i~~L~~~-~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl~~~~~~~L~~Y 415 (823)
++.|+++ +..+.|.+.+++.+- ..++.+.|..+..+|++++|++.|+++....-...|+......++.+.++.|
T Consensus 9 ~~~ll~~~~~ld~A~~fae~~~~-----~~vWs~La~A~l~~g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~y 83 (449)
T 1b89_A 9 VQVLIEHIGNLDRAYEFAERCNE-----PAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKY 83 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHccCHHHHHHHHHhCCC-----hHHHHHHHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHH
Confidence 5666665 669999999988643 2588899999999999999999999974333345677777778888899999
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHH
Q 037368 416 LEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKI 495 (823)
Q Consensus 416 L~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~i 495 (823)
|..-++. ..+....+-|+.||.|+++...+.+|++.++ ......+-..|-+.|++++|..+..+...+......
T Consensus 84 l~~ark~-~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn-----~~a~~~IGd~~~~~g~yeeA~~~Y~~a~n~~~LA~~ 157 (449)
T 1b89_A 84 LQMARKK-ARESYVETELIFALAKTNRLAELEEFINGPN-----NAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLAST 157 (449)
T ss_dssp --------------------------CHHHHTTTTTCC---------------------CTTTHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHh-CccchhHHHHHHHHHHhCCHHHHHHHHcCCc-----HHHHHHHHHHHHHcCCHHHHHHHHHHhhhHHHHHHH
Confidence 9886543 2233445668899999999999999998764 235566667788999999999999999888888888
Q ss_pred HHHhhcCHHHHHHHHhcCChHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHH---H
Q 037368 496 LLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKP-METIDILLRLCTEDGESTKRGASSSTYMSMLPSPVD---F 571 (823)
Q Consensus 496 l~~~~~~~~~al~yl~~l~~~~~~~~i~k~~~~Ll~~~p-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 571 (823)
|+.. |+|++|++-.++.....+. ..-+...+...- +.+ ..|.-. ....|+. +
T Consensus 158 L~~L-g~yq~AVea~~KA~~~~~W---k~v~~aCv~~~ef~lA-----~~~~l~---------------L~~~ad~l~~l 213 (449)
T 1b89_A 158 LVHL-GEYQAAVDGARKANSTRTW---KEVCFACVDGKEFRLA-----QMCGLH---------------IVVHADELEEL 213 (449)
T ss_dssp HHTT-TCHHHHHHHHHHHTCHHHH---HHHHHHHHHTTCHHHH-----HHTTTT---------------TTTCHHHHHHH
T ss_pred HHHh-ccHHHHHHHHHHcCCchhH---HHHHHHHHHcCcHHHH-----HHHHHH---------------HHhCHhhHHHH
Confidence 8876 9999999988886433221 111111111111 111 111100 1123333 3
Q ss_pred Hhhhc--cCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccccccCCcccccCcccccccccCCCCCCcccCCccccC
Q 037368 572 LNIFV--HHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTAD 649 (823)
Q Consensus 572 ~~~f~--~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 649 (823)
+..+. ++.+.++.+|+..+...+. ...+++-|-.+|..+ .
T Consensus 214 v~~Yek~G~~eEai~lLe~aL~le~a---h~~~ftel~il~~ky---~-------------------------------- 255 (449)
T 1b89_A 214 INYYQDRGYFEELITMLEAALGLERA---HMGMFTELAILYSKF---K-------------------------------- 255 (449)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSTTC---CHHHHHHHHHHHHTT---C--------------------------------
T ss_pred HHHHHHCCCHHHHHHHHHHHhCCcHH---HHHHHHHHHHHHHhc---C--------------------------------
Confidence 33443 3677889999998876532 468899999999887 2
Q ss_pred CCCCCCCcchHHHHHHHHHHHhhcCCCCCCCCCCChhhHHHHHHhcCCchhHHHHHHHhccHHHHHHHHHhc-CC---hh
Q 037368 650 GKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQA-HD---HE 725 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~kll~~L~~~~~~~~~~~~Yd~~~aL~lc~~~~~~~~~v~L~~k~g~~~~al~~~~~~-~d---~~ 725 (823)
.+|+++-|+. ....-+...+++.|.....+.+.++||-.-+.|+.|+..+|+. .+ ..
T Consensus 256 -------------p~k~~ehl~~------~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~h~~~a~~~~ 316 (449)
T 1b89_A 256 -------------PQKMREHLEL------FWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEG 316 (449)
T ss_dssp -------------HHHHHHHHHH------HSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHHSTTTTCCHH
T ss_pred -------------HHHHHHHHHH------HHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHhCChhhhhhH
Confidence 2799999998 5777889999999999999999999999999999999999985 22 22
Q ss_pred HHHHHHHHhCCCCCCCCcchHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCChHHHHHHhcCCCCcchHHHHHHHHHHH
Q 037368 726 GLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKL 805 (823)
Q Consensus 726 ~~i~~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~~~~i~~~L~~i~~~~~l~p~~vl~~l~~~~~~~~~~vk~~l~~~l 805 (823)
.-.+.+-+.+ +.+|+-.++.|++...+ ..+..+|..+.. .++|-.|++++.+... +..||+||..+-
T Consensus 317 ~f~~~~~kv~------n~elyYkai~fyl~~~p---~~l~~ll~~l~~--~ld~~r~v~~~~~~~~--l~l~~~yl~~v~ 383 (449)
T 1b89_A 317 QFKDIITKVA------NVELYYRAIQFYLEFKP---LLLNDLLMVLSP--RLDHTRAVNYFSKVKQ--LPLVKPYLRSVQ 383 (449)
T ss_dssp HHHHHHHHCS------STHHHHHHHHHHHHHCG---GGHHHHHHHHGG--GCCHHHHHHHHHHTTC--TTTTHHHHHHHH
T ss_pred HHHHHHhchh------HHHHHHHHHHHHHhcCH---HHHHHHHHHHHh--ccCcHHHHHHHHHcCC--cHHHHHHHHHHH
Confidence 2234455555 55899999999996533 246777776644 5999999999987665 677999998877
Q ss_pred HHHHHHHHH
Q 037368 806 EQESKLIEG 814 (823)
Q Consensus 806 ~~~~~~i~~ 814 (823)
...++.+++
T Consensus 384 ~~n~~~vne 392 (449)
T 1b89_A 384 NHNNKSVNE 392 (449)
T ss_dssp TTCCHHHHH
T ss_pred HhhHHHHHH
Confidence 665555543
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.46 E-value=6e-12 Score=134.97 Aligned_cols=227 Identities=9% Similarity=0.036 Sum_probs=146.3
Q ss_pred CEEEEEecCCeEEEEc-CCCeeeEeEeecc-c-ceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCC
Q 037368 36 GKVVIGCDDGAVSLLD-RGLKFNFGFQAHS-S-SVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTS 111 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~-~-~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~ 111 (823)
.++++++.+|.|.+|| .+++.++++.... . .+..++++|+|+.+ ++++.+++ |.+||+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~---------v~~~d~~~~------ 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSES---------LVKIDLVTG------ 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTE---------EEEEETTTC------
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCe---------EEEEECCCC------
Confidence 4689999999999999 6788887776432 2 58999999999765 55666666 999999742
Q ss_pred CCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE------------eCCeEEEEEcccccccccceeEEecCC
Q 037368 112 STSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL------------DNGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 112 ~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~------------~dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
..+..+........+..+.+++|+||++. ++++. .++.|.+|+.. ..+........
T Consensus 67 ----~~~~~~~~~~~~~~~~~~~~~~~s~dg~~---l~~~~~~~~~~~~~~~~~~~~i~v~d~~-----~~~~~~~~~~~ 134 (337)
T 1pby_B 67 ----ETLGRIDLSTPEERVKSLFGAALSPDGKT---LAIYESPVRLELTHFEVQPTRVALYDAE-----TLSRRKAFEAP 134 (337)
T ss_dssp ----CEEEEEECCBTTEEEECTTCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEETT-----TTEEEEEEECC
T ss_pred ----CeEeeEEcCCcccccccccceEECCCCCE---EEEEecccccccccccccCceEEEEECC-----CCcEEEEEeCC
Confidence 24445543210000012678999999988 88875 47999999863 11222223335
Q ss_pred CCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc---------------------------------------
Q 037368 180 CSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD--------------------------------------- 220 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~--------------------------------------- 220 (823)
..+.+++|+|+|+ .++++ ++.|.+||+.+.. ....+.
T Consensus 135 ~~~~~~~~s~dg~--~l~~~-~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 210 (337)
T 1pby_B 135 RQITMLAWARDGS--KLYGL-GRDLHVMDPEAGT-LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID 210 (337)
T ss_dssp SSCCCEEECTTSS--CEEEE-SSSEEEEETTTTE-EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC
T ss_pred CCcceeEECCCCC--EEEEe-CCeEEEEECCCCc-EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccc
Confidence 5688999999984 46655 5679999986432 111111
Q ss_pred ---------------------------cCCCccceecccCCCeEEEeeCCeEEEEecCCCCccccc--cCCeEEEEe--e
Q 037368 221 ---------------------------NIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPCWAF--EGEKKLLGW--F 269 (823)
Q Consensus 221 ---------------------------~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~~~~~--~g~~~~i~~--~ 269 (823)
.+...+.+++|+|+|+++.+.++.|++|+..+......+ ...+..+++ .
T Consensus 211 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 290 (337)
T 1pby_B 211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTD 290 (337)
T ss_dssp TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEEEEECSSCCCEEEECTT
T ss_pred cccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCCCcCcceecCCCceeeEEECCC
Confidence 001123357888888765544788999998643221222 223444544 4
Q ss_pred CcEEEEEEecCCCCccEEEEEeCCCCEEE
Q 037368 270 RGYLLCVIADQRNSKNIFNVYDLKNRLIA 298 (823)
Q Consensus 270 ~~ylv~~s~d~~~~~~~I~I~D~~~~~i~ 298 (823)
+.++++.+ .++.|.+||+.++.+.
T Consensus 291 g~~l~~~~-----~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 291 GSTVWLGG-----ALGDLAAYDAETLEKK 314 (337)
T ss_dssp SCEEEEES-----BSSEEEEEETTTCCEE
T ss_pred CCEEEEEc-----CCCcEEEEECcCCcEE
Confidence 66777653 3589999999876543
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.45 E-value=2.9e-11 Score=129.76 Aligned_cols=236 Identities=12% Similarity=0.102 Sum_probs=152.6
Q ss_pred eEEEeeCCC-EEEEEec-CCeEEEEc-CCCee-eEeEeecccceeEEEEecCCCEEEEEecCC---CCcccccceeEEEE
Q 037368 28 ITCCSSGRG-KVVIGCD-DGAVSLLD-RGLKF-NFGFQAHSSSVLFLQQLKQRNFLVTVGEDE---QVSAQQSAVCLKVF 100 (823)
Q Consensus 28 is~~~~~~~-~l~~gs~-dG~i~~~d-~~~~~-~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~---~~~~~~~~~~vkvW 100 (823)
..+..++++ ++++++. ++.|.+|| .+++. ...+..+..++.+++++|+|++|++...++ + |.+|
T Consensus 43 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~---------i~v~ 113 (331)
T 3u4y_A 43 VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFN---------MQSY 113 (331)
T ss_dssp EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCE---------EEEE
T ss_pred ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCccc---------EEEE
Confidence 433333444 5665554 89999999 56776 667777777776699999999999544442 4 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEE-EeCCe-EEEEEcccccccccce---eEE
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIG-LDNGC-IYCIKGDIARERITRF---KLQ 175 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G-~~dG~-V~l~~~~~~~~~~~k~---~~~ 175 (823)
|+... .+++.+... ..+.+++|+||++. ++++ ..++. |.+|+.+- .+... ...
T Consensus 114 d~~~~----------~~~~~~~~~------~~~~~~~~spdg~~---l~~~~~~~~~~i~~~~~~~---~g~~~~~~~~~ 171 (331)
T 3u4y_A 114 SFLKN----------KFISTIPIP------YDAVGIAISPNGNG---LILIDRSSANTVRRFKIDA---DGVLFDTGQEF 171 (331)
T ss_dssp ETTTT----------EEEEEEECC------TTEEEEEECTTSSC---EEEEEETTTTEEEEEEECT---TCCEEEEEEEE
T ss_pred ECCCC----------CeEEEEECC------CCccceEECCCCCE---EEEEecCCCceEEEEEECC---CCcEeecCCcc
Confidence 99742 245554422 22799999999986 5554 44578 99998641 11100 112
Q ss_pred ecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCc---ceEEccCCCccceecccCCCeEE-Eee--CCeEEE
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPK---RQFLDNIGCSTNSVAMSDRLELI-IGR--PEAVYF 247 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~---~~~l~~~~~~~~~~~~s~~~~li-v~~--~~~I~i 247 (823)
......+.+++|+|+|+ .+++++ ++.|.+||+.+.. . ...+. .+..+.+++|+|+|+++ ++. ++.|.+
T Consensus 172 ~~~~~~~~~~~~spdg~--~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 172 ISGGTRPFNITFTPDGN--FAFVANLIGNSIGILETQNPE-NITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp ECSSSSEEEEEECTTSS--EEEEEETTTTEEEEEECSSTT-SCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred ccCCCCccceEECCCCC--EEEEEeCCCCeEEEEECCCCc-ccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 23345578999999994 455554 4569999987543 3 33444 34566788999999844 443 357999
Q ss_pred EecCCCCc--c------ccccCC------eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEecc
Q 037368 248 YEVDGRGP--C------WAFEGE------KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLV 302 (823)
Q Consensus 248 ~~~~g~~~--~------~~~~g~------~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~ 302 (823)
|+..+... . ...... ...+++.+.++++.+. .+++|.|||+.++.+.+...
T Consensus 248 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~----~~~~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISAN----ISRELKVFTISGKVVGYVAG 312 (331)
T ss_dssp EETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEET----TTTEEEEEETTSCEEEECTT
T ss_pred EECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecC----CCCcEEEEEecCCcccceec
Confidence 99874221 0 001111 1245556778877664 35799999999988776544
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.44 E-value=7e-11 Score=127.73 Aligned_cols=261 Identities=11% Similarity=0.102 Sum_probs=161.1
Q ss_pred CeEEEee-CC-CEEEEEec-------CCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccce
Q 037368 27 NITCCSS-GR-GKVVIGCD-------DGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAV 95 (823)
Q Consensus 27 ~is~~~~-~~-~~l~~gs~-------dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~ 95 (823)
.+..++. ++ +.+++++. +|.|.+|| .+++.++.+.. ...+..+.++|+|+.+ ++.+.+++
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~-------- 112 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSA-------- 112 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTE--------
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCE--------
Confidence 3444443 33 57777663 67899999 67887777764 3458889999999955 55555666
Q ss_pred eEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCC----CceEEEEEecCCCCcceEEEEE--eCCeEEEEEcccccccc
Q 037368 96 CLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPE----AKITSFLVLEEAPPILLIAIGL--DNGCIYCIKGDIARERI 169 (823)
Q Consensus 96 ~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~v~~va~~~d~~~~~~ia~G~--~dG~V~l~~~~~~~~~~ 169 (823)
|.+||+... ..+..+.......|+ ..+.+++|+|+++. ++++. .++.|.+|+.. .
T Consensus 113 -v~~~d~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~---l~~~~~~~~~~i~~~d~~----~- 173 (353)
T 3vgz_A 113 -VTAIDAKTG----------EVKGRLVLDDRKRTEEVRPLQPRELVADDATNT---VYISGIGKESVIWVVDGG----N- 173 (353)
T ss_dssp -EEEEETTTC----------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE---EEEEEESSSCEEEEEETT----T-
T ss_pred -EEEEeCCCC----------eeEEEEecCCCccccccCCCCCceEEECCCCCE---EEEEecCCCceEEEEcCC----C-
Confidence 999999743 245555542111110 12688999999987 77765 37889999863 1
Q ss_pred cceeEEec-CCCCcceEEEeecCCeEEEEEEcC-CeEEEEEecCCCCcceEEcc----CCCccceecccCCCe-EEEee-
Q 037368 170 TRFKLQVD-NQCSVMGLGFRVDGQALQLFAVTP-NSVILFSLQNQPPKRQFLDN----IGCSTNSVAMSDRLE-LIIGR- 241 (823)
Q Consensus 170 ~k~~~~~~-~~~~It~l~fs~dg~~~~l~~~t~-~~V~~~d~~~~~~~~~~l~~----~~~~~~~~~~s~~~~-liv~~- 241 (823)
.+...... ....+.++.|+++|+ .+++++. +.|.+||+.+.. ....+.. +...+..++|+|+|. ++++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSEGK--RLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETTTT--EEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred CceEEEecCCCCccceEEECCCCC--EEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 22222223 344588999999994 5666654 569999987542 3333321 233455689999887 44443
Q ss_pred C-CeEEEEecCCCCcccccc-CCeE--EEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccc-eeEE-EeecCc
Q 037368 242 P-EAVYFYEVDGRGPCWAFE-GEKK--LLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKE-VSHM-LCEWGN 315 (823)
Q Consensus 242 ~-~~I~i~~~~g~~~~~~~~-g~~~--~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~-v~~v-~~~~~~ 315 (823)
+ +.|++|+.........+. +... .+.+.+.++.+... .+++|.+||+.+..+........ +..+ ++++++
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR----QAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET----TTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC----CCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence 3 689999986432221221 1222 34445677666653 35899999998776544333222 3333 666776
Q ss_pred -EEEEEcC
Q 037368 316 -IILVMTD 322 (823)
Q Consensus 316 -~~vvs~~ 322 (823)
+|+....
T Consensus 327 ~l~v~~~~ 334 (353)
T 3vgz_A 327 TLYVSVKQ 334 (353)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 4554443
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.44 E-value=6.2e-13 Score=149.56 Aligned_cols=201 Identities=11% Similarity=0.077 Sum_probs=129.3
Q ss_pred CeEEEee--CCCEEEEEecCCeEEEEcCC---------C--eeeEeE-----eecccceeEEEEecCCCEEE----EEec
Q 037368 27 NITCCSS--GRGKVVIGCDDGAVSLLDRG---------L--KFNFGF-----QAHSSSVLFLQQLKQRNFLV----TVGE 84 (823)
Q Consensus 27 ~is~~~~--~~~~l~~gs~dG~i~~~d~~---------~--~~~~~~-----~~H~~~V~~i~~~~~~~~l~----s~s~ 84 (823)
.+++++. ..+.+++|+.+| |++|+.. . ..+..+ -.|.+.|.+++|+|+|++|+ |++.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 4555544 467889998888 8887610 0 011111 13567899999999999999 8888
Q ss_pred CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEec-cCCCCCCceEEEEEecC-CCCcceEEEEEeCCeEEEEEc
Q 037368 85 DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVF-TSQFPEAKITSFLVLEE-APPILLIAIGLDNGCIYCIKG 162 (823)
Q Consensus 85 D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~v~~va~~~d-~~~~~~ia~G~~dG~V~l~~~ 162 (823)
|++ |+|||+.......+.... .+..++.. .+..+ |++++|+|+ +.. +|+|+.||+|++|+.
T Consensus 117 d~~---------v~iwd~~~~~~~~~~~~~--~~~~~~~~~~h~~~---V~~v~~~p~~~~~---las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 117 GSI---------IAFFDVRTFSNEAKQQKR--PFAYHKLLKDAGGM---VIDMKWNPTVPSM---VAVCLADGSIAVLQV 179 (434)
T ss_dssp EEE---------EEEEEHHHHHCTTCSSCC--CSEEEECCCSGGGS---EEEEEECSSCTTE---EEEEETTSCEEEEEE
T ss_pred Cce---------EEEEEccccccCCcCCcc--eeeeeeccCCCCCc---eEEEEECCCCCCE---EEEEECCCeEEEEEc
Confidence 998 999998642100000001 22233322 11233 999999998 778 999999999999986
Q ss_pred ccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEcc-------CCCccceecccCC
Q 037368 163 DIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDN-------IGCSTNSVAMSDR 234 (823)
Q Consensus 163 ~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~-------~~~~~~~~~~s~~ 234 (823)
. .+........+..+|++++|+|+|+ .|++++ ++.|++||+++. ....+.. |...+.+++|+++
T Consensus 180 ~----~~~~~~~~~~~~~~v~~v~wspdg~--~lasgs~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 180 T----ETVKVCATLPSTVAVTSVCWSPKGK--QLAVGKQNGTVVQYLPTLQ--EKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp S----SSEEEEEEECGGGCEEEEEECTTSS--CEEEEETTSCEEEECTTCC--EEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred C----CCcceeeccCCCCceeEEEEcCCCC--EEEEEcCCCcEEEEccCCc--ccccccCCcccCCCCceeEEEEEEecC
Confidence 3 1111112233467899999999985 455554 567999998732 2333321 2236678899999
Q ss_pred CeEEEee---C------CeEEEEecCCC
Q 037368 235 LELIIGR---P------EAVYFYEVDGR 253 (823)
Q Consensus 235 ~~liv~~---~------~~I~i~~~~g~ 253 (823)
+.++++. + ..+++|++...
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9887542 2 13889998643
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.44 E-value=1.3e-12 Score=156.54 Aligned_cols=271 Identities=10% Similarity=-0.003 Sum_probs=156.5
Q ss_pred EEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeeccc---ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 29 TCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSS---SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 29 s~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~---~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
++..++++.++..+.||+|++|| .+++....+.+|.. .|.+++|+|+|++|++++.|++...-.....+.+||+..
T Consensus 21 ~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 21 EAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred ccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 44445555555557899999999 66777767777765 499999999999999998875311000001288999984
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC---
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS--- 181 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~--- 181 (823)
. . + +.+... ......+.+++|||||+. ||.++ +++|.+|+.. .+...++...+...
T Consensus 101 ~--------~--~-~~l~~~--~~~~~~~~~~~~SPdG~~---la~~~-~~~i~~~~~~----~g~~~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 101 G--------D--P-QSLDPP--EVSNAKLQYAGWGPKGQQ---LIFIF-ENNIYYCAHV----GKQAIRVVSTGKEGVIY 159 (723)
T ss_dssp C--------C--C-EECCCT--TCCSCCCSBCCBCSSTTC---EEEEE-TTEEEEESSS----SSCCEEEECCCBTTTEE
T ss_pred C--------c--e-EeccCC--ccccccccccEECCCCCE---EEEEE-CCeEEEEECC----CCceEEEecCCCCCceE
Confidence 3 2 1 122211 111123788999999999 99988 5899999753 12222222222222
Q ss_pred ---------------cceEEEeecCCeEEEEEEcCC----------------------------------eEEEEEecCC
Q 037368 182 ---------------VMGLGFRVDGQALQLFAVTPN----------------------------------SVILFSLQNQ 212 (823)
Q Consensus 182 ---------------It~l~fs~dg~~~~l~~~t~~----------------------------------~V~~~d~~~~ 212 (823)
+.+++|+|||+ .++++..++ .|++||+.+.
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred CcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 37899999996 344444321 5889998754
Q ss_pred CCcceEEccC------CCccceecccCCCeEEEee---C---CeEEEEecCCCCcccccc----CC------eEEEEeeC
Q 037368 213 PPKRQFLDNI------GCSTNSVAMSDRLELIIGR---P---EAVYFYEVDGRGPCWAFE----GE------KKLLGWFR 270 (823)
Q Consensus 213 ~~~~~~l~~~------~~~~~~~~~s~~~~liv~~---~---~~I~i~~~~g~~~~~~~~----g~------~~~i~~~~ 270 (823)
. ....+..+ ...+.+++|||||++++.+ + ..|++|++.+......+. +. ...+++++
T Consensus 239 ~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 239 T-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp C-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTS
T ss_pred c-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCC
Confidence 3 22334322 3456678999999976432 1 368899987432111111 11 12344467
Q ss_pred cEEEEEEecCC---CCccEEEEEe-CCCCE----EEEeccccceeE--EEeecCcEEE-EEcC
Q 037368 271 GYLLCVIADQR---NSKNIFNVYD-LKNRL----IAHSLVVKEVSH--MLCEWGNIIL-VMTD 322 (823)
Q Consensus 271 ~ylv~~s~d~~---~~~~~I~I~D-~~~~~----i~~~~~i~~v~~--v~~~~~~~~v-vs~~ 322 (823)
.+++.++.+.. .....|.+|| ..++. ......-..+.. .++++++.++ .+.+
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS
T ss_pred CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC
Confidence 77776632210 0123677788 34432 112211112332 3677777544 4443
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.42 E-value=6.3e-12 Score=131.58 Aligned_cols=223 Identities=8% Similarity=-0.013 Sum_probs=142.9
Q ss_pred CCCeEEEeeC-C-CEEEEEecCCeEEEEc-CC-CeeeEeEeecc-cceeEEEEecCCCEEEEEecC--CCCcccccceeE
Q 037368 25 SGNITCCSSG-R-GKVVIGCDDGAVSLLD-RG-LKFNFGFQAHS-SSVLFLQQLKQRNFLVTVGED--EQVSAQQSAVCL 97 (823)
Q Consensus 25 ~~~is~~~~~-~-~~l~~gs~dG~i~~~d-~~-~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s~D--~~~~~~~~~~~v 97 (823)
...|++++.+ + .+|++++ +|.|++|| .+ ++....+.+|. ..|.+++|+|+|++|++++.+ +. .
T Consensus 41 ~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~---------~ 110 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK---------S 110 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS---------C
T ss_pred CcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc---------c
Confidence 3457666654 3 4667765 89999999 55 66665666664 789999999999999999944 44 6
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEE-EEEeCCeEEEEEcccccccccceeEEe
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIA-IGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia-~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
+||.++... +. ...+. . ..+ +.+++|+||++. ++ ++..+|.+.+|+.+. .+.+...+.
T Consensus 111 ~l~~~~~~~------~~---~~~~~--~-~~~---~~~~~~spdg~~---l~~~~~~~~~~~l~~~~~---~~~~~~~~~ 169 (297)
T 2ojh_A 111 AIYLLPSTG------GT---PRLMT--K-NLP---SYWHGWSPDGKS---FTYCGIRDQVFDIYSMDI---DSGVETRLT 169 (297)
T ss_dssp EEEEEETTC------CC---CEECC--S-SSS---EEEEEECTTSSE---EEEEEEETTEEEEEEEET---TTCCEEECC
T ss_pred eEEEEECCC------Cc---eEEee--c-CCC---ccceEECCCCCE---EEEEECCCCceEEEEEEC---CCCcceEcc
Confidence 666654211 11 11221 1 122 889999999998 77 677899999998653 122333444
Q ss_pred cCCCCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-EeeC------------
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGRP------------ 242 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~~------------ 242 (823)
.....+.++.|+|+|+ .+++++. ++.+.+|++.........+..+...+.++.|+|+|+.+ ++..
T Consensus 170 ~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp CSSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred cCCCccccceECCCCC-EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 5567899999999995 3444443 45678888763333345555555667788999999754 3332
Q ss_pred CeEEEEecCCCCcc--ccccC---CeEE--EEeeCcEEEEEEec
Q 037368 243 EAVYFYEVDGRGPC--WAFEG---EKKL--LGWFRGYLLCVIAD 279 (823)
Q Consensus 243 ~~I~i~~~~g~~~~--~~~~g---~~~~--i~~~~~ylv~~s~d 279 (823)
..|++|+.++.... ..+.+ .... +++.+.+|+.++.+
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 35899998754321 11212 2222 33356777777654
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.40 E-value=1.6e-11 Score=147.53 Aligned_cols=193 Identities=9% Similarity=-0.027 Sum_probs=127.3
Q ss_pred CCCeEEEee-CC-CEEEEEec-CC-----eEEEEc-CCCeeeEeEeeccc------------------------ceeEEE
Q 037368 25 SGNITCCSS-GR-GKVVIGCD-DG-----AVSLLD-RGLKFNFGFQAHSS------------------------SVLFLQ 71 (823)
Q Consensus 25 ~~~is~~~~-~~-~~l~~gs~-dG-----~i~~~d-~~~~~~~~~~~H~~------------------------~V~~i~ 71 (823)
...+++++. ++ .+|++++. +| .|++|| .+++..+.+..|.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 445755554 44 57899888 88 999999 66776666665543 389999
Q ss_pred EecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEE
Q 037368 72 QLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIG 151 (823)
Q Consensus 72 ~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G 151 (823)
|+|+|++|++++. ++ |.+||+.... .|.+. .+. ... ..+.+++|+|||+. ||++
T Consensus 116 ~SpDg~~l~~~~~-~~---------i~~~d~~~~~-------~~~~~-~l~--~~~---~~~~~~~~SPDG~~---la~~ 169 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GE---------LYLYDLKQEG-------KAAVR-QLT--HGE---GFATDAKLSPKGGF---VSFI 169 (741)
T ss_dssp ECTTSSEEEEEET-TE---------EEEEESSSCS-------TTSCC-BCC--CSS---SCEEEEEECTTSSE---EEEE
T ss_pred ECCCCCEEEEEeC-Cc---------EEEEECCCCC-------cceEE-Ecc--cCC---cccccccCCCCCCE---EEEE
Confidence 9999999999987 55 9999998531 01111 111 112 23999999999999 9998
Q ss_pred EeCCeEEEEEcccccccccceeEEec-CCC----------------CcceEEEeecCCeEEEEEEcCC------------
Q 037368 152 LDNGCIYCIKGDIARERITRFKLQVD-NQC----------------SVMGLGFRVDGQALQLFAVTPN------------ 202 (823)
Q Consensus 152 ~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~----------------~It~l~fs~dg~~~~l~~~t~~------------ 202 (823)
+ ++.|.+|+.. +.+...+.. +.. .+.++.|+|||+ .++++..++
T Consensus 170 ~-~~~i~~~d~~-----~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~ 242 (741)
T 2ecf_A 170 R-GRNLWVIDLA-----SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVY 242 (741)
T ss_dssp E-TTEEEEEETT-----TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEEC
T ss_pred e-CCcEEEEecC-----CCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCC
Confidence 7 6799999853 112222221 122 258899999996 344544333
Q ss_pred ---------------------eEEEEEecC-CCCcceEEc--cCCCccceecccCCCeEEE-ee------CCeEEEEecC
Q 037368 203 ---------------------SVILFSLQN-QPPKRQFLD--NIGCSTNSVAMSDRLELII-GR------PEAVYFYEVD 251 (823)
Q Consensus 203 ---------------------~V~~~d~~~-~~~~~~~l~--~~~~~~~~~~~s~~~~liv-~~------~~~I~i~~~~ 251 (823)
.|++||+.+ .. ...+.. .+...+.+++| |||+.++ ++ +..|++|++.
T Consensus 243 p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 243 ADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp SSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred CCcccceEeecCCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 678888765 43 222221 34556778899 9998554 32 2368899987
Q ss_pred C
Q 037368 252 G 252 (823)
Q Consensus 252 g 252 (823)
+
T Consensus 321 ~ 321 (741)
T 2ecf_A 321 S 321 (741)
T ss_dssp T
T ss_pred C
Confidence 4
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=3.5e-11 Score=129.79 Aligned_cols=229 Identities=10% Similarity=-0.035 Sum_probs=146.4
Q ss_pred CCEEEEEecCCeEEEEc-CCCeeeEeEeecc-cceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCC
Q 037368 35 RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHS-SSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTS 111 (823)
Q Consensus 35 ~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~-~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~ 111 (823)
+..+++++.+|+|++|| .+++.++++..+. ..+..++++|+|+.+ ++.+.+++ |.+||+...
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~---------i~~~d~~t~------ 75 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD---------IYGIDLDTC------ 75 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTE---------EEEEETTTT------
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCc---------EEEEeCCCC------
Confidence 34678899999999999 6788887887654 368899999999865 55556776 999999742
Q ss_pred CCCCceEEEEEeccCCCC---CCceEEEEEecCCCCcceEEEEEeC------------CeEEEEEcccccccccceeEEe
Q 037368 112 STSPDCIGILRVFTSQFP---EAKITSFLVLEEAPPILLIAIGLDN------------GCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 112 ~~~~~~~~~~~~~~~~~p---~~~v~~va~~~d~~~~~~ia~G~~d------------G~V~l~~~~~~~~~~~k~~~~~ 176 (823)
..+..+.... .| ...+.+++|+||++. ++++..+ +.|.+|+..- .+..+.....
T Consensus 76 ----~~~~~~~~~~--~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~~~~~~ 144 (349)
T 1jmx_B 76 ----KNTFHANLSS--VPGEVGRSMYSFAISPDGKE---VYATVNPTQRLNDHYVVKPPRLEVFSTAD--GLEAKPVRTF 144 (349)
T ss_dssp ----EEEEEEESCC--STTEEEECSSCEEECTTSSE---EEEEEEEEEECSSCEEECCCEEEEEEGGG--GGGBCCSEEE
T ss_pred ----cEEEEEEccc--ccccccccccceEECCCCCE---EEEEcccccccccccccCCCeEEEEECCC--ccccceeeec
Confidence 2444444221 11 012688999999999 9988865 8999998531 0001111122
Q ss_pred cCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccC----------------------------------
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNI---------------------------------- 222 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~---------------------------------- 222 (823)
.....+.+++|+++| . +++++ ..|.+||+.+.. ....+...
T Consensus 145 ~~~~~~~~~~~s~dg--~-l~~~~-~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T 1jmx_B 145 PMPRQVYLMRAADDG--S-LYVAG-PDIYKMDVKTGK-YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 219 (349)
T ss_dssp ECCSSCCCEEECTTS--C-EEEES-SSEEEECTTTCC-EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC
T ss_pred cCCCcccceeECCCC--c-EEEcc-CcEEEEeCCCCc-eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec
Confidence 334568999999999 4 55543 449999986432 22222111
Q ss_pred ----------------------------------CCccceecccC-CCeEEEeeCCeEEEEecCCCCcccc--ccCCeEE
Q 037368 223 ----------------------------------GCSTNSVAMSD-RLELIIGRPEAVYFYEVDGRGPCWA--FEGEKKL 265 (823)
Q Consensus 223 ----------------------------------~~~~~~~~~s~-~~~liv~~~~~I~i~~~~g~~~~~~--~~g~~~~ 265 (823)
+..+.+++++| +|+++.+.++.|++|+......... ..+.+..
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 299 (349)
T 1jmx_B 220 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 299 (349)
T ss_dssp -------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCCE
T ss_pred CCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEEcCeEEEEECccCeEEEEEcCCCCccc
Confidence 11233456778 8875543377999999874322112 2223444
Q ss_pred EEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEEE
Q 037368 266 LGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIAH 299 (823)
Q Consensus 266 i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~ 299 (823)
+++ .+.+|++.. .+++|.+||+.+.....
T Consensus 300 ~~~s~dg~~l~~~~-----~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 300 VAFDKKGDKLYLGG-----TFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEECSSSSCEEEES-----BSSEEEEEETTTTEEEE
T ss_pred eEECCCCCEEEEec-----CCCeEEEEeccccceee
Confidence 555 456777643 35899999998766544
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.39 E-value=6.8e-11 Score=128.08 Aligned_cols=236 Identities=11% Similarity=0.126 Sum_probs=148.0
Q ss_pred eeCCCEEEEEec---CCeEEEEc-CCCe--eeEeEeecccceeEEEEecCCCEEEEEe-cCCCCcccccceeEEEEeCCC
Q 037368 32 SSGRGKVVIGCD---DGAVSLLD-RGLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVG-EDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 32 ~~~~~~l~~gs~---dG~i~~~d-~~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s-~D~~~~~~~~~~~vkvWdl~~ 104 (823)
.++++.+++++. +|.|.+|+ .+++ .+..+.+|...+..++++|+|++|++++ .+++ |++|++..
T Consensus 47 ~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~---------v~v~~~~~ 117 (347)
T 3hfq_A 47 LSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGT---------AEVMKIAA 117 (347)
T ss_dssp ECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTE---------EEEEEECT
T ss_pred EccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCE---------EEEEEeCC
Confidence 345566766655 68999999 4444 4555667888999999999999998888 5666 99999963
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCC-----CCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeE---E-
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFP-----EAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL---Q- 175 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~---~- 175 (823)
. +....+..+.... ..| ...+.+++|+||++. ++++..++.|.+|+.+- ..+... +
T Consensus 118 ~-------g~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~spdg~l---~v~~~~~~~v~~~~~~~----~g~~~~~~~~~ 182 (347)
T 3hfq_A 118 D-------GALTLTDTVQHSG-HGPRPEQDGSHIHYTDLTPDNRL---AVIDLGSDKVYVYNVSD----AGQLSEQSVLT 182 (347)
T ss_dssp T-------SCEEEEEEEECCC-CCSSTTCSSCCEEEEEECTTSCE---EEEETTTTEEEEEEECT----TSCEEEEEEEE
T ss_pred C-------CCeeecceeecCC-CCCCccccCCCceEEEECCCCcE---EEEeCCCCEEEEEEECC----CCcEEEeeeEE
Confidence 1 1222233332111 011 123889999999997 99888899999998641 111111 1
Q ss_pred ecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCC-CCc--ceEEccCC------CccceecccCCCeEE-Ee-e-
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQ-PPK--RQFLDNIG------CSTNSVAMSDRLELI-IG-R- 241 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~-~~~--~~~l~~~~------~~~~~~~~s~~~~li-v~-~- 241 (823)
......+.+++|+|||+ .+++++ ++.|.+|++... +.. ...+.... ..+..++|+|+|+++ ++ .
T Consensus 183 ~~~g~~p~~~~~spdg~--~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDGQ--YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG 260 (347)
T ss_dssp CCTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET
T ss_pred cCCCCCCceEEECCCCC--EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC
Confidence 11233577899999994 455553 356999998742 211 11222111 335678999999844 43 3
Q ss_pred CCeEEEEecCCCCcc---ccccC---CeEEEEe--eCcEEEEEEecCCCCccEEEEE--eCCCCEE
Q 037368 242 PEAVYFYEVDGRGPC---WAFEG---EKKLLGW--FRGYLLCVIADQRNSKNIFNVY--DLKNRLI 297 (823)
Q Consensus 242 ~~~I~i~~~~g~~~~---~~~~g---~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~--D~~~~~i 297 (823)
++.|.+|+++..+.. ..+.. .+..+++ .+.+|++... .+++|.+| |..++.+
T Consensus 261 ~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~----~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 261 YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ----NTDNATLYARDLTSGKL 322 (347)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET----TTTEEEEEEECTTTCCE
T ss_pred CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc----CCCcEEEEEEeCCCCeE
Confidence 468999998633211 12222 2445554 5678877764 24789999 5554443
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.36 E-value=6.5e-12 Score=141.17 Aligned_cols=153 Identities=10% Similarity=0.069 Sum_probs=108.7
Q ss_pred CCeEEEeeCC--CEEE----EEecCCeEEEEc-CCC--------e---eeEeEeecccceeEEEEecC-CCEEEEEecCC
Q 037368 26 GNITCCSSGR--GKVV----IGCDDGAVSLLD-RGL--------K---FNFGFQAHSSSVLFLQQLKQ-RNFLVTVGEDE 86 (823)
Q Consensus 26 ~~is~~~~~~--~~l~----~gs~dG~i~~~d-~~~--------~---~~~~~~~H~~~V~~i~~~~~-~~~l~s~s~D~ 86 (823)
..|+++++++ .+|+ +|+.||+|++|| .++ + .++.+++|.+.|.+++|+|+ +++|+|+|.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 3587777653 5777 688899999999 332 1 24567789999999999997 89999999999
Q ss_pred CCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccc
Q 037368 87 QVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIAR 166 (823)
Q Consensus 87 ~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~ 166 (823)
+ |++||+... .++.....+ ..+ |++++|+|+++. +|+|+.||+|++|+..
T Consensus 173 ~---------v~iwD~~~~----------~~~~~~~~~--~~~---v~~v~wspdg~~---lasgs~dg~v~iwd~~--- 222 (434)
T 2oit_A 173 S---------IAVLQVTET----------VKVCATLPS--TVA---VTSVCWSPKGKQ---LAVGKQNGTVVQYLPT--- 222 (434)
T ss_dssp C---------EEEEEESSS----------EEEEEEECG--GGC---EEEEEECTTSSC---EEEEETTSCEEEECTT---
T ss_pred e---------EEEEEcCCC----------cceeeccCC--CCc---eeEEEEcCCCCE---EEEEcCCCcEEEEccC---
Confidence 8 999999842 132222211 223 999999999999 9999999999999863
Q ss_pred ccccceeEEec-------CCCCcceEEEeecCCeEEEEEE--cCC------eEEEEEecCC
Q 037368 167 ERITRFKLQVD-------NQCSVMGLGFRVDGQALQLFAV--TPN------SVILFSLQNQ 212 (823)
Q Consensus 167 ~~~~k~~~~~~-------~~~~It~l~fs~dg~~~~l~~~--t~~------~V~~~d~~~~ 212 (823)
+.....+.. +...|.+++|++++ .++++. .++ .+++|++..+
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~--~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 --LQEKKVIPCPPFYESDHPVRVLDVLWIGTY--VFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp --CCEEEEECCCTTCCTTSCEEEEEEEEEETT--EEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred --CcccccccCCcccCCCCceeEEEEEEecCc--eEEEEEccCCCccCCCCceEEEEeccC
Confidence 111112211 12379999999877 344332 221 2899998754
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.36 E-value=2.1e-10 Score=124.20 Aligned_cols=256 Identities=10% Similarity=0.103 Sum_probs=147.8
Q ss_pred EEEEEe----cCCeEEEEc---CCCeeeE-eEeecccceeEEEEecCCCEEEEEec---CCCCcccccceeEEEEeCCCC
Q 037368 37 KVVIGC----DDGAVSLLD---RGLKFNF-GFQAHSSSVLFLQQLKQRNFLVTVGE---DEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 37 ~l~~gs----~dG~i~~~d---~~~~~~~-~~~~H~~~V~~i~~~~~~~~l~s~s~---D~~~~~~~~~~~vkvWdl~~~ 105 (823)
++++|+ .++.|.+|. .+++... ...++...+..++++|+|+ |++++. +++ |.+|++...
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~---------v~~~~~~~g 73 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGG---------IAAWQIDGQ 73 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEE---------EEEEEEETT
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCce---------EEEEEecCC
Confidence 456664 345677776 4566543 3455677889999999999 665554 455 999999632
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEcccccccccceeE---E-ecCCC
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIARERITRFKL---Q-VDNQC 180 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~---~-~~~~~ 180 (823)
....+..+... . ..+..++|+||++. ++++. .+|+|.+|+.+- ...... + ..+.+
T Consensus 74 --------~~~~~~~~~~~--~---~~p~~~a~spdg~~---l~~~~~~~~~v~v~~~~~----~g~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 74 --------TAHKLNTVVAP--G---TPPAYVAVDEARQL---VYSANYHKGTAEVMKIAA----DGALTLTDTVQHSGHG 133 (347)
T ss_dssp --------EEEEEEEEEEE--S---CCCSEEEEETTTTE---EEEEETTTTEEEEEEECT----TSCEEEEEEEECCCCC
T ss_pred --------cEEEeeeeecC--C---CCCEEEEECCCCCE---EEEEeCCCCEEEEEEeCC----CCCeeecceeecCCCC
Confidence 21223232211 1 22789999999998 77776 679999998631 111111 1 11222
Q ss_pred --------CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceE--E-ccCCCccceecccCCCe-EEEee--CCe
Q 037368 181 --------SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQF--L-DNIGCSTNSVAMSDRLE-LIIGR--PEA 244 (823)
Q Consensus 181 --------~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~--l-~~~~~~~~~~~~s~~~~-liv~~--~~~ 244 (823)
.+.+++|+|+|+ ++++. ++.|.+|++...+..... + ...+..+..++|+|||+ ++++. ++.
T Consensus 134 p~~~~~~~~~~~~~~spdg~---l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNR---LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSC---EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCccccCCCceEEEECCCCc---EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE
Confidence 378899999994 44443 456999999733322211 1 12344567789999998 44443 468
Q ss_pred EEEEecCC-CCcc---cc---ccC------CeEEE--EeeCcEEEEEEecCCCCccEEEEEeCCC-CE--EEEeccc--c
Q 037368 245 VYFYEVDG-RGPC---WA---FEG------EKKLL--GWFRGYLLCVIADQRNSKNIFNVYDLKN-RL--IAHSLVV--K 304 (823)
Q Consensus 245 I~i~~~~g-~~~~---~~---~~g------~~~~i--~~~~~ylv~~s~d~~~~~~~I~I~D~~~-~~--i~~~~~i--~ 304 (823)
|.+|+.+. .+.. .. ... .+..+ ++.+.++++... .+++|.+||+.. +. ....... .
T Consensus 211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~----~~~~v~v~~~~~~g~~~~~~~~~~~~~ 286 (347)
T 3hfq_A 211 IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR----GYNTLAVFAVTADGHLTLIQQISTEGD 286 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE----TTTEEEEEEECGGGCEEEEEEEECSSS
T ss_pred EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC----CCCEEEEEEECCCCcEEEeEEEecCCC
Confidence 99998763 1211 01 111 13334 445677765543 357999999862 11 1111111 1
Q ss_pred ceeEE-EeecCcE-EEEEcCCeEEEEe
Q 037368 305 EVSHM-LCEWGNI-ILVMTDKSVLCIG 329 (823)
Q Consensus 305 ~v~~v-~~~~~~~-~vvs~~~~v~~l~ 329 (823)
.+..+ +++++.. |+.+.++..+.+.
T Consensus 287 ~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 287 FPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp CCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 13333 6777774 4444443344444
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.32 E-value=2e-10 Score=143.72 Aligned_cols=174 Identities=5% Similarity=0.021 Sum_probs=123.2
Q ss_pred CeEEEe-e-CCC-EEEEEecCCeEEEEcCCCeeeEeEeeccc-ceeEEEEecCCCEEEEEecCCCCcccccceeEE-EEe
Q 037368 27 NITCCS-S-GRG-KVVIGCDDGAVSLLDRGLKFNFGFQAHSS-SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK-VFD 101 (823)
Q Consensus 27 ~is~~~-~-~~~-~l~~gs~dG~i~~~d~~~~~~~~~~~H~~-~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk-vWd 101 (823)
.+.+++ + +++ .|++++ +|.|++|+........+..|.+ .+..++|+ +|+.|+++++++. +. +|+
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~---------l~~~~d 365 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGD---------FLGIYD 365 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEE---------EEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCc---------eEEEEE
Confidence 354444 3 444 677776 8999999944333345777887 99999999 9999999998665 77 888
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQC 180 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~ 180 (823)
+... . ...+. ... ..+.+++|+||++. +|+++.++.|++|+.. ..+...+. .+.+
T Consensus 366 ~~~~--------~---~~~l~--~~~---~~~~~~~~SpDG~~---la~~~~~~~v~~~d~~-----tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 366 YRTG--------K---AEKFE--ENL---GNVFAMGVDRNGKF---AVVANDRFEIMTVDLE-----TGKPTVIERSREA 421 (1045)
T ss_dssp TTTC--------C---EEECC--CCC---CSEEEEEECTTSSE---EEEEETTSEEEEEETT-----TCCEEEEEECSSS
T ss_pred CCCC--------C---ceEec--CCc---cceeeeEECCCCCE---EEEECCCCeEEEEECC-----CCceEEeccCCCC
Confidence 8742 1 12222 111 33899999999999 9999999999999863 22333333 5678
Q ss_pred CcceEEEeecCCeEEEEEEcCC----------eEEEEEecCCCCcceEEccCCCccceecccCCCeEE
Q 037368 181 SVMGLGFRVDGQALQLFAVTPN----------SVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI 238 (823)
Q Consensus 181 ~It~l~fs~dg~~~~l~~~t~~----------~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li 238 (823)
+|.+++|+|||+ .+++++.++ .|++||+.+.. ...+..+...+.+++|+|||+.+
T Consensus 422 ~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l 486 (1045)
T 1k32_A 422 MITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNL 486 (1045)
T ss_dssp CCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEE
T ss_pred CccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEE
Confidence 899999999995 344444433 69999997642 34455566667778999999854
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.32 E-value=8e-11 Score=140.72 Aligned_cols=269 Identities=12% Similarity=0.006 Sum_probs=152.5
Q ss_pred CCeEEEeeC-CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 26 GNITCCSSG-RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 26 ~~is~~~~~-~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
..|++++++ ++.++++ .+|.|++|| .+++.. .+..|.+.|.+++|+|+|+.|+++ .|++ |.+||+.
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~---------i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHN---------LYIARGG 149 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTE---------EEEEECB
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCe---------EEEEecC
Confidence 357666654 4566655 569999999 555544 566778889999999999999995 5666 9999997
Q ss_pred CCCCCCCCCCCCceEEEEEeccCC----CC-----CCceEEEEEecCCCCcceEEEEE----------------------
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQ----FP-----EAKITSFLVLEEAPPILLIAIGL---------------------- 152 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~----~p-----~~~v~~va~~~d~~~~~~ia~G~---------------------- 152 (823)
.... ..+. ..+........ .| ...+.+++|+|||+. ||+++
T Consensus 150 ~~~~---~~g~--~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~---la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 150 KLGE---GMSR--AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC---LAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp CTTS---CCCC--CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE---EEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred cccc---cCCC--cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE---EEEEEECCCCCceEEeeccCCCCCceE
Confidence 4000 0011 11111100000 00 011588999999999 99887
Q ss_pred -----------eCCeEEEEEcccccccccceeEEe---cCCCCcceEEEeecCCeEEEEEEcCC-----eEEEEEecCCC
Q 037368 153 -----------DNGCIYCIKGDIARERITRFKLQV---DNQCSVMGLGFRVDGQALQLFAVTPN-----SVILFSLQNQP 213 (823)
Q Consensus 153 -----------~dG~V~l~~~~~~~~~~~k~~~~~---~~~~~It~l~fs~dg~~~~l~~~t~~-----~V~~~d~~~~~ 213 (823)
.++.|.+|+.. +.+...+. .+...|.+++|+|||+ .++++..+. .|++||+.+..
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLA-----TGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETT-----TTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCC
T ss_pred EeeCCCCCCCCCeeEEEEEECC-----CCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCc
Confidence 34567788753 12222222 2345789999999995 334433332 69999987542
Q ss_pred CcceEEc-cCCC---ccceecccC--CCeEEEee--CCeEEEEecCCCCc-cccccCC---eEE-EEe--eCcEEEEEEe
Q 037368 214 PKRQFLD-NIGC---STNSVAMSD--RLELIIGR--PEAVYFYEVDGRGP-CWAFEGE---KKL-LGW--FRGYLLCVIA 278 (823)
Q Consensus 214 ~~~~~l~-~~~~---~~~~~~~s~--~~~liv~~--~~~I~i~~~~g~~~-~~~~~g~---~~~-i~~--~~~ylv~~s~ 278 (823)
....+.. .... .+.+++|+| ||++++++ ++.+.+|..+..+. ...+.++ ... ++| .+.+|+..+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 2223332 1221 235679999 99977543 34566776542222 1222222 222 344 5667777664
Q ss_pred cCCCCccEEEEEeCCCCEEEEeccccceeEE-EeecCcEEEEE
Q 037368 279 DQRNSKNIFNVYDLKNRLIAHSLVVKEVSHM-LCEWGNIILVM 320 (823)
Q Consensus 279 d~~~~~~~I~I~D~~~~~i~~~~~i~~v~~v-~~~~~~~~vvs 320 (823)
+.......|..||+.++....-.....+..+ +++++..++++
T Consensus 376 ~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 376 EASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp SSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEE
T ss_pred CCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEE
Confidence 3211124778888866432211111223332 66667655543
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.32 E-value=2.5e-10 Score=122.54 Aligned_cols=234 Identities=12% Similarity=0.067 Sum_probs=142.5
Q ss_pred CeEEEee-C-CCEEEEEecC-CeEEEEc-C--CCe--eeEeEeecccceeEEEEecCCCEEEEEec-CCCCcccccceeE
Q 037368 27 NITCCSS-G-RGKVVIGCDD-GAVSLLD-R--GLK--FNFGFQAHSSSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCL 97 (823)
Q Consensus 27 ~is~~~~-~-~~~l~~gs~d-G~i~~~d-~--~~~--~~~~~~~H~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~v 97 (823)
.+.+++. + ++++++++.+ |.|.+|+ . +++ .+..+..+. .+..++|+|+|++|++++. |++ |
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~---------i 108 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGN---------V 108 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTE---------E
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCe---------E
Confidence 4544444 3 3568888776 9999999 3 444 344555444 8999999999998876665 665 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEccccccccccee---
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIARERITRFK--- 173 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~--- 173 (823)
.+||+.... ....+..+.. . ..+.+++|+|+++. ++++. .+|.|.+|+.. ...+..
T Consensus 109 ~~~d~~~~~-------~~~~~~~~~~---~---~~~~~~~~s~dg~~---l~~~~~~~~~v~~~d~~----~~~~~~~~~ 168 (343)
T 1ri6_A 109 SVTRLEDGL-------PVGVVDVVEG---L---DGCHSANISPDNRT---LWVPALKQDRICLFTVS----DDGHLVAQD 168 (343)
T ss_dssp EEEEEETTE-------EEEEEEEECC---C---TTBCCCEECTTSSE---EEEEEGGGTEEEEEEEC----TTSCEEEEE
T ss_pred EEEECCCCc-------cccccccccC---C---CCceEEEECCCCCE---EEEecCCCCEEEEEEec----CCCceeeec
Confidence 999995110 1112223221 1 22889999999987 77776 89999999863 111111
Q ss_pred --EEe-cCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCC-Cc--ceEEc----cCC--CccceecccCCCeEE-
Q 037368 174 --LQV-DNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQP-PK--RQFLD----NIG--CSTNSVAMSDRLELI- 238 (823)
Q Consensus 174 --~~~-~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~-~~--~~~l~----~~~--~~~~~~~~s~~~~li- 238 (823)
... .....+.+++|+|+|+ .+++++ ++.|.+|++.... .. ..... .++ ..+.+++|+|+|+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~--~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQ--YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ccccccCCCCCcceEEECCCCC--EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 111 2245788999999984 455443 4679999986422 11 11221 111 233468999998644
Q ss_pred Eee--CCeEEEEecCCCC---ccc-cc--cCCeEEEEe--eCcEEEEEEecCCCCccEEEEEe--CCCCE
Q 037368 239 IGR--PEAVYFYEVDGRG---PCW-AF--EGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYD--LKNRL 296 (823)
Q Consensus 239 v~~--~~~I~i~~~~g~~---~~~-~~--~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D--~~~~~ 296 (823)
++. ++.|.+|+++..+ ... .+ .+.+..++| .+.++++.+. .++.|.||+ ..++.
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ----KSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT----TTCEEEEEEEETTTTE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC----CCCeEEEEEEcCCCce
Confidence 333 4689999987211 111 12 222444444 5677777653 358999994 44543
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.31 E-value=7.9e-11 Score=141.15 Aligned_cols=232 Identities=7% Similarity=0.015 Sum_probs=144.5
Q ss_pred eEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeeccc---ceeEEEEecCCCEEEEEec---------CCCCcccccc
Q 037368 28 ITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSS---SVLFLQQLKQRNFLVTVGE---------DEQVSAQQSA 94 (823)
Q Consensus 28 is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~---~V~~i~~~~~~~~l~s~s~---------D~~~~~~~~~ 94 (823)
.+...++++.++.++.||+|++|| .+++....+.+|.. .|.+++|+|+|++|++++. |++
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~------- 91 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT------- 91 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE-------
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE-------
Confidence 344556666777777899999999 66776656666654 4999999999999999887 565
Q ss_pred eeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeE
Q 037368 95 VCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~ 174 (823)
|++||+.+.. ++....+ . ..+.+++|||||+. ||++. +++|.+|+.. .+ +...
T Consensus 92 --i~~~d~~~g~----------~~~~~~l---~---~~~~~~~~SPDG~~---la~~~-~~~i~~~~~~----~g-~~~~ 144 (719)
T 1z68_A 92 --YYIYDLSNGE----------FVRGNEL---P---RPIQYLCWSPVGSK---LAYVY-QNNIYLKQRP----GD-PPFQ 144 (719)
T ss_dssp --EEEEETTTTE----------ECCSSCC---C---SSBCCEEECSSTTC---EEEEE-TTEEEEESST----TS-CCEE
T ss_pred --EEEEECCCCc----------cccceec---C---cccccceECCCCCE---EEEEE-CCeEEEEeCC----CC-CcEE
Confidence 9999998431 1100011 1 22889999999999 99986 8899999753 11 1111
Q ss_pred Ee-cC-C-----------------CCcceEEEeecCCeEEEEEEcCC---------------------------------
Q 037368 175 QV-DN-Q-----------------CSVMGLGFRVDGQALQLFAVTPN--------------------------------- 202 (823)
Q Consensus 175 ~~-~~-~-----------------~~It~l~fs~dg~~~~l~~~t~~--------------------------------- 202 (823)
+. .+ . +...+++|||||+ .+++++.++
T Consensus 145 l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 145 ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 11 11 1 1225899999996 444444331
Q ss_pred -eEEEEEecCCCCc--ce-----EEccCCCccceecccCCCeEEEee---C-C--eEEEEe----cCCCCcc-ccc----
Q 037368 203 -SVILFSLQNQPPK--RQ-----FLDNIGCSTNSVAMSDRLELIIGR---P-E--AVYFYE----VDGRGPC-WAF---- 259 (823)
Q Consensus 203 -~V~~~d~~~~~~~--~~-----~l~~~~~~~~~~~~s~~~~liv~~---~-~--~I~i~~----~~g~~~~-~~~---- 259 (823)
.|++||+.+.... .. .+.++...+..++||||+++++.+ + + .|++|+ +.+ +.+ ..+
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~ 302 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEeccc
Confidence 5778888653210 01 122455567788999999877542 1 1 488888 653 222 122
Q ss_pred cCCe----------EEEEeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 260 EGEK----------KLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 260 ~g~~----------~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
+++. ..+++++.+++.++.+.. ....|.+||+.++.
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD-GYKHIHYIKDTVEN 348 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTT-SCEEEEEESSCSTT
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccC-CceEEEEEECCCCc
Confidence 2221 123445676665433211 34578888987643
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.30 E-value=8.6e-11 Score=141.26 Aligned_cols=233 Identities=9% Similarity=0.011 Sum_probs=142.6
Q ss_pred ccceeEEEEecCCCEEEEEec-CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCC------------
Q 037368 64 SSSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPE------------ 130 (823)
Q Consensus 64 ~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~------------ 130 (823)
...|..++|+|+|++|++++. |+..... .|.+||+.+.. +.+.+...... |+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~----~i~~~d~~~g~----------~~~~~~~~~~~-~~~~~~~~~~~~~~ 100 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQL----DLWSYDIGSGQ----------TRLLVDSKVVL-PGTETLSDEEKARR 100 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEE----EEEEEETTTCC----------EEEEECGGGTC---------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCccc----EEEEEECCCCc----------eeEccchhhcc-cccccccchhhhhh
Confidence 357999999999999999998 7710001 19999997432 22222211100 00
Q ss_pred --------CceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccc--ceeEEecCCCCcceEEEeecCCeEEEEEEc
Q 037368 131 --------AKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERIT--RFKLQVDNQCSVMGLGFRVDGQALQLFAVT 200 (823)
Q Consensus 131 --------~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~--k~~~~~~~~~~It~l~fs~dg~~~~l~~~t 200 (823)
..+.+++|+|||+. +|+++ ++.|.+|+.. .+. ....+..+...+.+++|+|||+ .|+.++
T Consensus 101 ~~~~~~~~~~v~~~~~SpDg~~---l~~~~-~~~i~~~d~~----~~~~~~~~~l~~~~~~~~~~~~SPDG~--~la~~~ 170 (741)
T 2ecf_A 101 ERQRIAAMTGIVDYQWSPDAQR---LLFPL-GGELYLYDLK----QEGKAAVRQLTHGEGFATDAKLSPKGG--FVSFIR 170 (741)
T ss_dssp ------CCEESCCCEECTTSSE---EEEEE-TTEEEEEESS----SCSTTSCCBCCCSSSCEEEEEECTTSS--EEEEEE
T ss_pred hhhhhccccCcceeEECCCCCE---EEEEe-CCcEEEEECC----CCCcceEEEcccCCcccccccCCCCCC--EEEEEe
Confidence 12788999999999 99988 4999999863 110 2333444567899999999995 566666
Q ss_pred CCeEEEEEecCCCCcceEEccCCC----------------ccceecccCCCeEE-Eee-CC-------------------
Q 037368 201 PNSVILFSLQNQPPKRQFLDNIGC----------------STNSVAMSDRLELI-IGR-PE------------------- 243 (823)
Q Consensus 201 ~~~V~~~d~~~~~~~~~~l~~~~~----------------~~~~~~~s~~~~li-v~~-~~------------------- 243 (823)
++.|++|++.+.. ...+...+.. .+.+++|||||+.+ +++ ++
T Consensus 171 ~~~i~~~d~~~g~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 171 GRNLWVIDLASGR-QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp TTEEEEEETTTTE-EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred CCcEEEEecCCCC-EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 7789999987632 2222222211 13678999999844 442 22
Q ss_pred --------------eEEEEecCC-CCccc-ccc-CC---e--EEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEE--E
Q 037368 244 --------------AVYFYEVDG-RGPCW-AFE-GE---K--KLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIA--H 299 (823)
Q Consensus 244 --------------~I~i~~~~g-~~~~~-~~~-g~---~--~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~--~ 299 (823)
.|++|++.+ ..... ... ++ . ..+ +++.+|+..+.+....+..|.+||+.++... .
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 688888875 32211 111 12 1 234 6778888876543335789999999875422 1
Q ss_pred ecccc----ceeE-EEeecCcEEEEEcCC
Q 037368 300 SLVVK----EVSH-MLCEWGNIILVMTDK 323 (823)
Q Consensus 300 ~~~i~----~v~~-v~~~~~~~~vvs~~~ 323 (823)
..... .+.. .++++|.+++++..+
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEEECTT
T ss_pred EcCCCCcCCcCCceEECCCCeEEEEecCC
Confidence 11111 1112 367777766665544
No 153
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.25 E-value=2.9e-09 Score=122.98 Aligned_cols=234 Identities=11% Similarity=0.086 Sum_probs=149.7
Q ss_pred CCEEEEEe-cCCeEEEEc-CCCeeeEeEee----------cc-cceeEEEEecCCC-EEEEEecCCCCcccccceeEEEE
Q 037368 35 RGKVVIGC-DDGAVSLLD-RGLKFNFGFQA----------HS-SSVLFLQQLKQRN-FLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 35 ~~~l~~gs-~dG~i~~~d-~~~~~~~~~~~----------H~-~~V~~i~~~~~~~-~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
++++++++ .+++|.+|| .++++++++.. |. ..|..|.++|++. ++++++++++ |.+|
T Consensus 237 g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~---------i~vv 307 (543)
T 1nir_A 237 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK---------VLLV 307 (543)
T ss_dssp TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE---------EEEE
T ss_pred CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe---------EEEE
Confidence 35777777 589999999 78888888875 33 3799999999765 5677888887 9999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEE-EEEeCCeEEEEEcccccccccceeEEecCC
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIA-IGLDNGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia-~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
|+.... .. .+.++... .+ +..++|+||+++ +. ++..+++|.+|+.. .+.....+..+.
T Consensus 308 d~~~~~-------~l-~~~~i~~~--~~----~~~~~~spdg~~---l~va~~~~~~v~v~D~~----tg~l~~~i~~g~ 366 (543)
T 1nir_A 308 NYKDID-------NL-TVTSIGAA--PF----LHDGGWDSSHRY---FMTAANNSNKVAVIDSK----DRRLSALVDVGK 366 (543)
T ss_dssp ECTTSS-------SC-EEEEEECC--SS----CCCEEECTTSCE---EEEEEGGGTEEEEEETT----TTEEEEEEECSS
T ss_pred EecCCC-------cc-eeEEeccC--cC----ccCceECCCCCE---EEEEecCCCeEEEEECC----CCeEEEeeccCC
Confidence 997532 11 12233311 22 688999999986 54 45568999999863 121222222221
Q ss_pred --CCcceEEE-eecCCeEEEEEEc---CCeEEEEEecCC------CCcceEEccCCCccceecccCCCeEEE-ee-----
Q 037368 180 --CSVMGLGF-RVDGQALQLFAVT---PNSVILFSLQNQ------PPKRQFLDNIGCSTNSVAMSDRLELII-GR----- 241 (823)
Q Consensus 180 --~~It~l~f-s~dg~~~~l~~~t---~~~V~~~d~~~~------~~~~~~l~~~~~~~~~~~~s~~~~liv-~~----- 241 (823)
.+-.+..| +|++. .+++++ +++|.+|++... ....+++..++..+..+.++|+|+.+. +.
T Consensus 367 ~ph~g~g~~~~~p~~g--~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 367 TPHPGRGANFVHPKYG--PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp SBCCTTCEEEEETTTE--EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCCCCCcccCCCCCc--cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC
Confidence 22234444 56642 344443 467999998752 235566777777777889999998664 43
Q ss_pred ---CCeEEEEecCCCCccc-cc---------cCC--eEEE--EeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEe
Q 037368 242 ---PEAVYFYEVDGRGPCW-AF---------EGE--KKLL--GWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHS 300 (823)
Q Consensus 242 ---~~~I~i~~~~g~~~~~-~~---------~g~--~~~i--~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~ 300 (823)
+++|.+|++......+ .+ ++. ...+ ...|.++.+....+.+.+++|.|||.++..+...
T Consensus 445 ~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 445 ARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp HHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred cccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 4599999987332211 11 222 2233 3357788766433223578999999998776543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.21 E-value=1.2e-08 Score=110.94 Aligned_cols=266 Identities=13% Similarity=0.116 Sum_probs=149.9
Q ss_pred CEEEEEe----cCCeEEEEc---CCCeeeEeEeecccceeEEEEecCCCEEEEEecC----CCCcccccceeEEEEeCCC
Q 037368 36 GKVVIGC----DDGAVSLLD---RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGED----EQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 36 ~~l~~gs----~dG~i~~~d---~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D----~~~~~~~~~~~vkvWdl~~ 104 (823)
.++++|+ .++.|++|. .+++.......|...+..++++|+|++|++++.+ ++ |.+|+++.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~---------v~~~~~~~ 84 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAA---------VSAFAFDK 84 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCE---------EEEEEEET
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCc---------EEEEEEeC
Confidence 3567775 356898886 3455432222277889999999999999999987 44 99999874
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEcccccccccceeE-EecCCC--
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIARERITRFKL-QVDNQC-- 180 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~-~~~~~~-- 180 (823)
. ++....+...... . ..+..+++ +++. ++++. .+|+|.+|+.+-.......... ...+.+
T Consensus 85 ~------~g~~~~~~~~~~~--~---~~p~~~~~--dg~~---l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 85 E------KGTLHLLNTQKTM--G---ADPCYLTT--NGKN---IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPD 148 (361)
T ss_dssp T------TTEEEEEEEEECS--S---SCEEEEEE--CSSE---EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSC
T ss_pred C------CCcEEEeeEeccC--C---CCcEEEEE--CCCE---EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCC
Confidence 2 1221122222211 1 22677887 6666 55554 6889999986310000001111 112222
Q ss_pred -------CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCC------cc------eEEccCCCccceecccCCCeEE-
Q 037368 181 -------SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPP------KR------QFLDNIGCSTNSVAMSDRLELI- 238 (823)
Q Consensus 181 -------~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~------~~------~~l~~~~~~~~~~~~s~~~~li- 238 (823)
.+.+++|+|+|+ .++++. ++.|.+|++..... .. ......+..+.+++|+|+|+++
T Consensus 149 ~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 226 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGK--YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAY 226 (361)
T ss_dssp TTTCSSCCEEEEEECTTSS--EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ccccCCCcceEEEECCCCC--EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEE
Confidence 247899999995 455554 45799999875431 11 1122345567789999999744
Q ss_pred Eee--CCeEEEEecCCCCcc---cc---ccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCC--CCE---EEEe
Q 037368 239 IGR--PEAVYFYEVDGRGPC---WA---FEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK--NRL---IAHS 300 (823)
Q Consensus 239 v~~--~~~I~i~~~~g~~~~---~~---~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~--~~~---i~~~ 300 (823)
++. ++.|.+|+.++ +.. .. ..++ +..+++ ++.+|++.... .+++|.||++. ++. +...
T Consensus 227 v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~---~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 227 LINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL---KADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS---SSCEEEEEEECTTTCCEEEEEEE
T ss_pred EEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC---CCCEEEEEEEcCCCCcEEEeeEe
Confidence 444 46899999863 221 11 1111 234444 67787665431 14799999985 332 2211
Q ss_pred ccccceeEE-EeecCcEEEEEc-CCeEEEEeecC
Q 037368 301 LVVKEVSHM-LCEWGNIILVMT-DKSVLCIGEKD 332 (823)
Q Consensus 301 ~~i~~v~~v-~~~~~~~~vvs~-~~~v~~l~~~~ 332 (823)
..-..+..+ +++++..++++. ++..+.+...+
T Consensus 303 ~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 303 LTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 111123333 777787544443 44444443333
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.20 E-value=6.9e-10 Score=138.85 Aligned_cols=260 Identities=7% Similarity=-0.045 Sum_probs=161.6
Q ss_pred CeEEEeeCCCE-EEEEecCCeEEEEc--CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSGRGK-VVIGCDDGAVSLLD--RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~~~~-l~~gs~dG~i~~~d--~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.+.+....++. +++++.+|++.+|. ..+...+.+..|. .+...+|+|+|+.|++++ |++ |.+||+.
T Consensus 205 ~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~---------i~~~d~~ 273 (1045)
T 1k32_A 205 HVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGS---------IYIFNPD 273 (1045)
T ss_dssp CCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTE---------EEEECTT
T ss_pred cccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCE---------EEEecCC
Confidence 35555554444 46778889999997 4455555666665 467779999999999875 666 9999984
Q ss_pred CCCCCCCCCCCCceEEEEEeccC-CC-----CCCceEEEEEe-cCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTS-QF-----PEAKITSFLVL-EEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~-~~-----p~~~v~~va~~-~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
.. .+..+..... .. +...+.+++|+ |||+. +|+++ +|.|.+|+.. +.....+.
T Consensus 274 ~~-----------~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~---la~~~-~~~i~~~~~~-----~~~~~~~~ 333 (1045)
T 1k32_A 274 TE-----------KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL---IAFVS-RGQAFIQDVS-----GTYVLKVP 333 (1045)
T ss_dssp TC-----------CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC---EEEEE-TTEEEEECTT-----SSBEEECS
T ss_pred ce-----------EeeeeccCcccccccccccccccceeeecCCCCCE---EEEEE-cCEEEEEcCC-----CCceEEcc
Confidence 21 1212211000 00 01238999999 99999 99988 8999999753 12222333
Q ss_pred cCCC-CcceEEEeecCCeEEEEEEcCCeEE-EEEecCCCCcceEEccCCCccceecccCCCeEEE-eeC-CeEEEEecCC
Q 037368 177 DNQC-SVMGLGFRVDGQALQLFAVTPNSVI-LFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELII-GRP-EAVYFYEVDG 252 (823)
Q Consensus 177 ~~~~-~It~l~fs~dg~~~~l~~~t~~~V~-~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv-~~~-~~I~i~~~~g 252 (823)
.+.+ .+.+++|+ ||+ .+++++.+.+++ +|++.+.. ...+..+...+.+++|||||+.++ +.. +.|++|++.+
T Consensus 334 ~~~~~~~~~~~~s-dg~-~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t 409 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKV-AFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET 409 (1045)
T ss_dssp CCSCEEEEEECSS-SEE-EEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCcceEEeeeEc-CCC-eEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence 4455 79999999 884 344444444688 88886542 233335666778899999998654 443 5899999874
Q ss_pred CCccccccCC---eE--EEEeeCcEEEEEEecC-----CCCccEEEEEeCCCCEEEE-eccccceeEE-EeecCcEEEEE
Q 037368 253 RGPCWAFEGE---KK--LLGWFRGYLLCVIADQ-----RNSKNIFNVYDLKNRLIAH-SLVVKEVSHM-LCEWGNIILVM 320 (823)
Q Consensus 253 ~~~~~~~~g~---~~--~i~~~~~ylv~~s~d~-----~~~~~~I~I~D~~~~~i~~-~~~i~~v~~v-~~~~~~~~vvs 320 (823)
.......+++ .. .+++++.+++..+.+. ....++|.+||+.++.+.. ..+...+..+ ++++|..+++.
T Consensus 410 g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 410 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEE
Confidence 3222222232 22 3445678888876532 1134699999998766432 2222223333 67777754444
Q ss_pred c
Q 037368 321 T 321 (823)
Q Consensus 321 ~ 321 (823)
+
T Consensus 490 s 490 (1045)
T 1k32_A 490 S 490 (1045)
T ss_dssp E
T ss_pred e
Confidence 4
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.19 E-value=5.6e-10 Score=133.62 Aligned_cols=233 Identities=6% Similarity=-0.057 Sum_probs=137.0
Q ss_pred eEEEee-CC-CEEEEEecC---------CeEEEEc-CCCeeeEeEe---ecccceeEEEEecCCCEEEEEecCCCCcccc
Q 037368 28 ITCCSS-GR-GKVVIGCDD---------GAVSLLD-RGLKFNFGFQ---AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQ 92 (823)
Q Consensus 28 is~~~~-~~-~~l~~gs~d---------G~i~~~d-~~~~~~~~~~---~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~ 92 (823)
|.++++ ++ ++|++++.+ +.|.+|| .+++. +.+. +|...|..++|+|+|+.||+++. ++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~----- 135 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NN----- 135 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TE-----
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-Ce-----
Confidence 655444 44 478888764 7899999 55554 3444 45556999999999999999987 45
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCC-----C--------CCceEEEEEecCCCCcceEEEEEeCC----
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQF-----P--------EAKITSFLVLEEAPPILLIAIGLDNG---- 155 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~-----p--------~~~v~~va~~~d~~~~~~ia~G~~dG---- 155 (823)
|.+||+.... +.+......... + ...+.+++|+|||+. ||+++.++
T Consensus 136 ----i~~~~~~~g~----------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~---la~~~~~~~~~~ 198 (723)
T 1xfd_A 136 ----IYYCAHVGKQ----------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR---LAYAAINDSRVP 198 (723)
T ss_dssp ----EEEESSSSSC----------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE---EEEEEEECTTSC
T ss_pred ----EEEEECCCCc----------eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE---EEEEEECCCccc
Confidence 9999998432 222222111000 0 012489999999999 99887653
Q ss_pred ------------------------------eEEEEEcccccccccceeEEecC------CCCcceEEEeecCCeEEEEEE
Q 037368 156 ------------------------------CIYCIKGDIARERITRFKLQVDN------QCSVMGLGFRVDGQALQLFAV 199 (823)
Q Consensus 156 ------------------------------~V~l~~~~~~~~~~~k~~~~~~~------~~~It~l~fs~dg~~~~l~~~ 199 (823)
+|.+|+.. .+.....+..+ ...|.+++|+|||+ .++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~----~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~--~l~~~ 272 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN----GPTHDLEMMPPDDPRMREYYITMVKWATSTK--VAVTW 272 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS----SSCCCEECCCCCCGGGSSEEEEEEEESSSSE--EEEEE
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC----CCceeEEeeCCccCCCccceeEEEEEeCCCe--EEEEE
Confidence 56677642 11111222221 45688999999994 45443
Q ss_pred -cC----CeEEEEEecCCCCcceEEc-cCCCcc----ceecccCCCe-EEEe-e--CC------eEEEEe-cCCCCc--c
Q 037368 200 -TP----NSVILFSLQNQPPKRQFLD-NIGCST----NSVAMSDRLE-LIIG-R--PE------AVYFYE-VDGRGP--C 256 (823)
Q Consensus 200 -t~----~~V~~~d~~~~~~~~~~l~-~~~~~~----~~~~~s~~~~-liv~-~--~~------~I~i~~-~~g~~~--~ 256 (823)
.. ..|++||+.+.. ...++. .+...+ ..++|+|||+ ++++ . ++ .|++|+ ..+... .
T Consensus 273 ~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNI 351 (723)
T ss_dssp EETTSCEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCC
T ss_pred EcCCCCeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccce
Confidence 22 248999987543 334433 222323 3678999998 3332 2 33 477777 343220 2
Q ss_pred ccc-cCC--eE---EEEeeCcEEEEEEecCCCCccEEEEEeCC
Q 037368 257 WAF-EGE--KK---LLGWFRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 257 ~~~-~g~--~~---~i~~~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
..+ .++ .. .+++.+.+|+..+.+. ..+++.||++.
T Consensus 352 ~~l~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~~l~~~~ 392 (723)
T 1xfd_A 352 QSITSGDWDVTKILAYDEKGNKIYFLSTED--LPRRRQLYSAN 392 (723)
T ss_dssp CBSCCSSSCEEEEEEEETTTTEEEEEESSS--CTTCCEEEEEC
T ss_pred eEeecCCeEEEeeeEEcCCCCEEEEEEcCC--CCcceEEEEEe
Confidence 222 222 11 2344577887666431 12678888774
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.19 E-value=1.2e-09 Score=130.54 Aligned_cols=241 Identities=7% Similarity=-0.004 Sum_probs=141.7
Q ss_pred eeCC-CEEEEEecCCeEEEEc-CC-----CeeeEeEeecccc--------------eeEEEEecCCCEEEEEecCCCCcc
Q 037368 32 SSGR-GKVVIGCDDGAVSLLD-RG-----LKFNFGFQAHSSS--------------VLFLQQLKQRNFLVTVGEDEQVSA 90 (823)
Q Consensus 32 ~~~~-~~l~~gs~dG~i~~~d-~~-----~~~~~~~~~H~~~--------------V~~i~~~~~~~~l~s~s~D~~~~~ 90 (823)
.+++ +.|++ +.++.|++|+ .+ ++..+....+... +.++.|+|+|++|++++.|.++.+
T Consensus 128 ~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~ 206 (706)
T 2z3z_A 128 FSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK 206 (706)
T ss_dssp ECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC
T ss_pred CCCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc
Confidence 3444 46777 4789999999 55 6655434444333 589999999999999985432100
Q ss_pred c------------------------ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcc
Q 037368 91 Q------------------------QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPIL 146 (823)
Q Consensus 91 ~------------------------~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~ 146 (823)
. .....|.+||+.... +. .+... ...+..+.+++|+||++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~----------~~-~~~~~--~~~~~~~~~~~~spdg~~-- 271 (706)
T 2z3z_A 207 PTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK----------TV-YLQTG--EPKEKFLTNLSWSPDENI-- 271 (706)
T ss_dssp CEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE----------EE-ECCCC--SCTTCEEEEEEECTTSSE--
T ss_pred eEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc----------eE-eeccC--CCCceeEeeEEEECCCCE--
Confidence 0 001238899987421 11 11110 011133899999999999
Q ss_pred eEEEEEeCC-----eEEEEEcccccccccceeEEe-c-CC---CCcceEEEee--cCCeEEEEEEcCC-eEEEEEecCCC
Q 037368 147 LIAIGLDNG-----CIYCIKGDIARERITRFKLQV-D-NQ---CSVMGLGFRV--DGQALQLFAVTPN-SVILFSLQNQP 213 (823)
Q Consensus 147 ~ia~G~~dG-----~V~l~~~~~~~~~~~k~~~~~-~-~~---~~It~l~fs~--dg~~~~l~~~t~~-~V~~~d~~~~~ 213 (823)
+++++.++ .|.+|+.. .+...+.+. + .. .++.++.|+| || ..+++++.+ .+.+|.++..+
T Consensus 272 -l~~~~~~~~~~~~~v~~~d~~----~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg--~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 272 -LYVAEVNRAQNECKVNAYDAE----TGRFVRTLFVETDKHYVEPLHPLTFLPGSNN--QFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp -EEEEEECTTSCEEEEEEEETT----TCCEEEEEEEEECSSCCCCCSCCEECTTCSS--EEEEEECTTSSCEEEEEETTS
T ss_pred -EEEEEeCCCCCeeEEEEEECC----CCceeeEEEEccCCCeECccCCceeecCCCC--EEEEEEccCCccEEEEEECCC
Confidence 99988776 88889853 221233332 1 12 2467899999 98 466666544 46777765323
Q ss_pred CcceEEccCCCccce-ecccCCCeEE-Ee-eCC-----eEEEEecCCCCc-cccccCCeEE--EEeeCcEEEEEEecCCC
Q 037368 214 PKRQFLDNIGCSTNS-VAMSDRLELI-IG-RPE-----AVYFYEVDGRGP-CWAFEGEKKL--LGWFRGYLLCVIADQRN 282 (823)
Q Consensus 214 ~~~~~l~~~~~~~~~-~~~s~~~~li-v~-~~~-----~I~i~~~~g~~~-~~~~~g~~~~--i~~~~~ylv~~s~d~~~ 282 (823)
.....+..+...+.+ ++|+|+|+.+ ++ .++ .|+.|+..+... .+...+.... +++++.+++..+.+..
T Consensus 345 ~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~- 423 (706)
T 2z3z_A 345 RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPT- 423 (706)
T ss_dssp CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSS-
T ss_pred CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCC-
Confidence 334455444445554 7899998643 33 332 566666654221 1221222233 3445778877654311
Q ss_pred CccEEEEEeCCCCE
Q 037368 283 SKNIFNVYDLKNRL 296 (823)
Q Consensus 283 ~~~~I~I~D~~~~~ 296 (823)
..+.|.+||+.++.
T Consensus 424 ~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 424 VPRKVTVTNIGKGS 437 (706)
T ss_dssp CSCEEEEEESSSCE
T ss_pred CCcEEEEEECCCCe
Confidence 23679999998765
No 158
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.16 E-value=4.5e-09 Score=113.35 Aligned_cols=235 Identities=10% Similarity=-0.018 Sum_probs=141.3
Q ss_pred ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC
Q 037368 62 AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE 141 (823)
Q Consensus 62 ~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d 141 (823)
.....+..++++|+|+.+++++.++.+.. ..-.|.+||+... ..++.+... ..+..++|+|+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~--~~~~v~~~d~~~~----------~~~~~~~~~------~~~~~~~~s~d 99 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLD--KGGVVYRLDPVTL----------EVTQAIHND------LKPFGATINNT 99 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTE--ESEEEEEECTTTC----------CEEEEEEES------SCCCSEEEETT
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCC--CCccEEEEcCCCC----------eEEEEEecC------CCcceEEECCC
Confidence 34567889999999998888775421000 0001999998742 245555532 12688999999
Q ss_pred CCCcceEEE-EEeCCeEEEEEcccccccccceeEEecCCC---------CcceEEEeecCCeEEEEEEc---CCeEEEEE
Q 037368 142 APPILLIAI-GLDNGCIYCIKGDIARERITRFKLQVDNQC---------SVMGLGFRVDGQALQLFAVT---PNSVILFS 208 (823)
Q Consensus 142 ~~~~~~ia~-G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~---------~It~l~fs~dg~~~~l~~~t---~~~V~~~d 208 (823)
++. +++ +..++.|.+|+.. .+.....+..+.. .+.++.|+++|+ .+++++ ++.|.+||
T Consensus 100 g~~---l~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 100 TQT---LWFGNTVNSAVTAIDAK----TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN--TVYISGIGKESVIWVVD 170 (353)
T ss_dssp TTE---EEEEETTTTEEEEEETT----TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT--EEEEEEESSSCEEEEEE
T ss_pred CCE---EEEEecCCCEEEEEeCC----CCeeEEEEecCCCccccccCCCCCceEEECCCCC--EEEEEecCCCceEEEEc
Confidence 985 544 4557899999863 1211122221111 168899999985 466554 45699999
Q ss_pred ecCCCCcceEEccCCCccceecccCCCeE-EEe-eCCeEEEEecCCCCcccccc----CC---eEEEEe--eCcEEEEEE
Q 037368 209 LQNQPPKRQFLDNIGCSTNSVAMSDRLEL-IIG-RPEAVYFYEVDGRGPCWAFE----GE---KKLLGW--FRGYLLCVI 277 (823)
Q Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-iv~-~~~~I~i~~~~g~~~~~~~~----g~---~~~i~~--~~~ylv~~s 277 (823)
..+.. ....+..++..+.+++|+|+|.. +++ .++.|.+|+.........+. ++ ...+.+ .+.++.+..
T Consensus 171 ~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 171 GGNIK-LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTTTE-EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCCc-eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 87542 44455545666788999998874 444 34689999986432221221 11 233444 577776665
Q ss_pred ecCCCCccEEEEEeCCCCEEEEeccccceeE-EEeecCc-EEEEEc-CCeEEEE
Q 037368 278 ADQRNSKNIFNVYDLKNRLIAHSLVVKEVSH-MLCEWGN-IILVMT-DKSVLCI 328 (823)
Q Consensus 278 ~d~~~~~~~I~I~D~~~~~i~~~~~i~~v~~-v~~~~~~-~~vvs~-~~~v~~l 328 (823)
. .++.|.+||+.++.+........... .++++++ +|+... ++.|..+
T Consensus 250 ~----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 250 S----KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp S----SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred C----CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEE
Confidence 3 35899999998765443333333222 3666776 555553 3444433
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.15 E-value=3.4e-09 Score=127.45 Aligned_cols=266 Identities=7% Similarity=0.043 Sum_probs=149.7
Q ss_pred EEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccc-----eeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 29 TCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSS-----VLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 29 s~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~-----V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
+...++++.++..+ ||+|++|| .+++....+.+|... ...+.++|||+.|++++.|.+..--.....+.+||+
T Consensus 21 ~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp CEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 44445555444334 99999999 677777677887633 244888999999999988743100000011779999
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecC-C--
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDN-Q-- 179 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~-~-- 179 (823)
.+.. +. . +.. .+ ..+..++|||||+. ||.+. +++|.+|+.. .+...++...+ .
T Consensus 100 ~~~~----------~~-~--l~~--~~-~~~~~~~~SPdG~~---la~~~-~~~i~~~~~~----~~~~~~lt~~g~~~~ 155 (740)
T 4a5s_A 100 NKRQ----------LI-T--EER--IP-NNTQWVTWSPVGHK---LAYVW-NNDIYVKIEP----NLPSYRITWTGKEDI 155 (740)
T ss_dssp TTTE----------EC-C--SSC--CC-TTEEEEEECSSTTC---EEEEE-TTEEEEESST----TSCCEECCSCCBTTT
T ss_pred CCCc----------EE-E--ccc--CC-CcceeeEECCCCCE---EEEEE-CCeEEEEECC----CCceEEEcCCCCccc
Confidence 8531 11 1 111 12 33899999999999 99985 8899999753 11111111111 1
Q ss_pred ---------------CCcceEEEeecCCeEEEEEEcCC------------------------------------eEEEEE
Q 037368 180 ---------------CSVMGLGFRVDGQALQLFAVTPN------------------------------------SVILFS 208 (823)
Q Consensus 180 ---------------~~It~l~fs~dg~~~~l~~~t~~------------------------------------~V~~~d 208 (823)
+...++.|||||+ .++++..+. +|++||
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d 234 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred eecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEE
Confidence 2234699999996 455543221 366677
Q ss_pred ecC---CCC-cceEEc------cCCCccceecccCCCeEEEe---eC---CeEEEEecCCCCc---c---ccc--cCC--
Q 037368 209 LQN---QPP-KRQFLD------NIGCSTNSVAMSDRLELIIG---RP---EAVYFYEVDGRGP---C---WAF--EGE-- 262 (823)
Q Consensus 209 ~~~---~~~-~~~~l~------~~~~~~~~~~~s~~~~liv~---~~---~~I~i~~~~g~~~---~---~~~--~g~-- 262 (823)
+.+ ... ....+. ++...+..++|||||++++. ++ ..|++|++.+... | ..+ +++
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~ 314 (740)
T 4a5s_A 235 TDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG 314 (740)
T ss_dssp TTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSS
T ss_pred CCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCc
Confidence 765 321 112222 13444567889999995543 22 2688999874320 2 111 222
Q ss_pred --------eEEEEeeCcEEE-EEEecCCCCccEEEEEeCCCCEEEE-eccccceeEEEeecCc-EEEEEcC
Q 037368 263 --------KKLLGWFRGYLL-CVIADQRNSKNIFNVYDLKNRLIAH-SLVVKEVSHMLCEWGN-IILVMTD 322 (823)
Q Consensus 263 --------~~~i~~~~~ylv-~~s~d~~~~~~~I~I~D~~~~~i~~-~~~i~~v~~v~~~~~~-~~vvs~~ 322 (823)
.-.++++|..++ ..+... ....|.+||+.++.... +..-..+..+...+++ +|+.+..
T Consensus 315 ~v~~~~~~~p~fspDG~~l~~~~s~~~--G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLDGNSFYKIISNEE--GYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNE 383 (740)
T ss_dssp CSSSSSCCCCEECTTSSEEEEEEECTT--SCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESC
T ss_pred eEccCcCCCceEcCCCCEEEEEEEcCC--CceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEec
Confidence 113455677777 444321 35689999998754322 2222224444333343 5555543
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.15 E-value=2.4e-09 Score=124.90 Aligned_cols=230 Identities=10% Similarity=-0.026 Sum_probs=136.6
Q ss_pred CeEEEe-eC-CCEEEEEec-CCeEEEEc-CCCeeeEeEeecc-cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 27 NITCCS-SG-RGKVVIGCD-DGAVSLLD-RGLKFNFGFQAHS-SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 27 ~is~~~-~~-~~~l~~gs~-dG~i~~~d-~~~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
.|.+++ ++ ++.|++++. +|++.+|+ .+++.. .+..|. ..|..+.|+|+ +++++++.++... . .++|.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~--~----~~l~~ 94 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAE--Q----HALFK 94 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSC--C----EEEEE
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCc--c----eEEEE
Confidence 464444 34 468888876 99999999 445544 555555 68999999998 7888777522100 1 66765
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS 181 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~ 181 (823)
+...+ .+.. . . +.. . ..+...+|+||++. ..++++. ++.+.+|+.+ +.+.+.+.....
T Consensus 95 ~~~~~-----~g~~--~-~--l~~--~--~~~~~~~~s~dg~~-~~~~s~~-~~~~~l~d~~-----~g~~~~l~~~~~- 152 (582)
T 3o4h_A 95 VNTSR-----PGEE--Q-R--LEA--V--KPMRILSGVDTGEA-VVFTGAT-EDRVALYALD-----GGGLRELARLPG- 152 (582)
T ss_dssp EETTS-----TTCC--E-E--CTT--S--CSBEEEEEEECSSC-EEEEEEC-SSCEEEEEEE-----TTEEEEEEEESS-
T ss_pred EeccC-----CCcc--c-c--ccC--C--CCceeeeeCCCCCe-EEEEecC-CCCceEEEcc-----CCcEEEeecCCC-
Confidence 54210 0111 1 1 111 1 11556788888864 1144444 4556699753 223333443333
Q ss_pred cceEEEeecCCeEEEEEEcC----CeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee--CC--eEEEEecCCC
Q 037368 182 VMGLGFRVDGQALQLFAVTP----NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR--PE--AVYFYEVDGR 253 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t~----~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~--~~--~I~i~~~~g~ 253 (823)
.+++|+|||+ .+++++.+ ..|++||+.+.. .+.+..+...+...+|||||+.++++ ++ .|++|++++.
T Consensus 153 -~~~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 153 -FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp -CEEEEEEETT-EEEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred -ceEEECCCCC-EEEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 8999999996 34444444 358999987543 34565666667889999999866543 34 6999998754
Q ss_pred CccccccCCe---E--E--------EEeeCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 254 GPCWAFEGEK---K--L--------LGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 254 ~~~~~~~g~~---~--~--------i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
... .+.++. . . +++++..+++.+ .+++++||++ ++..
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~-----~~g~~~l~~~-g~~~ 278 (582)
T 3o4h_A 229 SVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR-----REGRSAVFID-GERV 278 (582)
T ss_dssp CEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE-----ETTEEEEEET-TEEE
T ss_pred cEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE-----cCCcEEEEEE-CCee
Confidence 332 333321 1 1 444563333344 3589999999 5443
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.11 E-value=4.4e-09 Score=115.38 Aligned_cols=228 Identities=11% Similarity=0.028 Sum_probs=136.4
Q ss_pred CCEEEEEec-CC--eEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 35 RGKVVIGCD-DG--AVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 35 ~~~l~~gs~-dG--~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
+.+|++++. +| .|.+|| .+++......+|...+..+.|+|+|+.|+.++.+++ |.+||+....
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~---------l~~~d~~~g~---- 113 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN---------LMRVDLATLE---- 113 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTE---------EEEEETTTCC----
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCe---------EEEEECCCCc----
Confidence 457888776 77 488888 566766555666666667889999999999998886 9999998532
Q ss_pred CCCCCceEEEEEeccCCCCCCceE--EEEEecCCCCcceEEEEE----------------------eCCeEEEEEccccc
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKIT--SFLVLEEAPPILLIAIGL----------------------DNGCIYCIKGDIAR 166 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v~--~va~~~d~~~~~~ia~G~----------------------~dG~V~l~~~~~~~ 166 (823)
...... .|...+. ...++||+.. ++... .++.|.+|+..
T Consensus 114 ------~~~~~~-----~~~~~~~~~~~~~~~dg~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~--- 176 (388)
T 3pe7_A 114 ------ENVVYQ-----VPAEWVGYGTWVANSDCTK---LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK--- 176 (388)
T ss_dssp ------EEEEEE-----CCTTEEEEEEEEECTTSSE---EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT---
T ss_pred ------ceeeee-----chhhcccccceeECCCCCe---eccccccCcccccccccchhhhhhccCCcceEEEEECC---
Confidence 222222 1212232 3345899887 66422 23566677642
Q ss_pred ccccceeEEecCCCCcceEEEee-cCCeEEEEEEcC------CeEEEEEecCCCCcceEEccCC--CccceecccCCCe-
Q 037368 167 ERITRFKLQVDNQCSVMGLGFRV-DGQALQLFAVTP------NSVILFSLQNQPPKRQFLDNIG--CSTNSVAMSDRLE- 236 (823)
Q Consensus 167 ~~~~k~~~~~~~~~~It~l~fs~-dg~~~~l~~~t~------~~V~~~d~~~~~~~~~~l~~~~--~~~~~~~~s~~~~- 236 (823)
..+.+.+......+..+.|+| ||+ .++++... ..|++++..+.. ...+..+. ..+....|+|||+
T Consensus 177 --~g~~~~l~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 177 --TGESTVILQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp --TCCEEEEEEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSC
T ss_pred --CCceEEeecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCE
Confidence 223444555566789999999 984 34555542 257888876542 23332222 2355678999998
Q ss_pred EEEee---CC---eEEEEecCCCCc-c-ccccCC--------eEEEEeeCcEEEEEEecC----CCCccEEEEEeCCCCE
Q 037368 237 LIIGR---PE---AVYFYEVDGRGP-C-WAFEGE--------KKLLGWFRGYLLCVIADQ----RNSKNIFNVYDLKNRL 296 (823)
Q Consensus 237 liv~~---~~---~I~i~~~~g~~~-~-~~~~g~--------~~~i~~~~~ylv~~s~d~----~~~~~~I~I~D~~~~~ 296 (823)
++... +. .|++|++.+... . ..+++. ...+++++.+++....++ ......|.+||+.++.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 43322 12 399999874321 1 123331 124666777776654321 0145789999998765
Q ss_pred E
Q 037368 297 I 297 (823)
Q Consensus 297 i 297 (823)
+
T Consensus 332 ~ 332 (388)
T 3pe7_A 332 Q 332 (388)
T ss_dssp E
T ss_pred e
Confidence 4
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.10 E-value=1.2e-08 Score=107.76 Aligned_cols=223 Identities=11% Similarity=0.006 Sum_probs=141.1
Q ss_pred EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCc
Q 037368 37 KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPD 116 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~ 116 (823)
.+++++.+|.|..|+..+. .+.|..+...+..++++|+|+++++.+.++. |.+||.... .
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~---------i~~~d~~~g--------~-- 101 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRR---------LERQREPGG--------E-- 101 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTE---------EEEECSTTC--------C--
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCe---------EEEEcCCCC--------c--
Confidence 5788899999999996666 6788888889999999999998888776666 999998532 1
Q ss_pred eEEEEEeccCCCCCCceEEEEEecCCCCcceEEE----EEe-------------CCeEEEEEcccccccccceeEEecCC
Q 037368 117 CIGILRVFTSQFPEAKITSFLVLEEAPPILLIAI----GLD-------------NGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 117 ~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~----G~~-------------dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
......... ..+...+..++++|+|+. +++ |+. .|.|..++.+ .+...+....
T Consensus 102 ~~~~~~~~~-~~~~~~~~~i~~d~~G~l---~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------g~~~~~~~~~ 171 (296)
T 3e5z_A 102 WESIADSFE-GKKLNSPNDVCLAPDGSL---WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------GTLSAPIRDR 171 (296)
T ss_dssp EEEEECEET-TEECCCCCCEEECTTSCE---EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------SCEEEEECCC
T ss_pred EEEEeeccC-CCCCCCCCCEEECCCCCE---EEECCccccccccccccccccCCCcEEEEECCC------CCEEEeecCC
Confidence 211111111 111122678999999987 776 431 3455555431 2333344444
Q ss_pred CCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCc---ceEEccCCCccceecccCCCeEEEeeCCeEEEEecCCCCc
Q 037368 180 CSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPK---RQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGP 255 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~---~~~l~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~ 255 (823)
....+++|+++|+ .+++.+ .++|++|++...+.. ..++......+.+++++++|.+.++.++.|.+|+.+|+..
T Consensus 172 ~~~~gi~~s~dg~--~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 172 VKPNGLAFLPSGN--LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDEL 249 (296)
T ss_dssp SSEEEEEECTTSC--EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSCEE
T ss_pred CCCccEEECCCCC--EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCCEE
Confidence 5678999999994 454444 357999998633323 2334323445678899999998887788999999886421
Q ss_pred c-ccccCCeEEEEee---CcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 256 C-WAFEGEKKLLGWF---RGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 256 ~-~~~~g~~~~i~~~---~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
. +.....+..+++. +..|.+.+. ..+.-++++++.+
T Consensus 250 ~~~~~~~~~~~~~f~~~d~~~L~v~t~------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 250 GRVLTPQTTSNLCFGGPEGRTLYMTVS------TEFWSIETNVRGL 289 (296)
T ss_dssp EEEECSSCCCEEEEESTTSCEEEEEET------TEEEEEECSCCBC
T ss_pred EEEECCCCceeEEEECCCCCEEEEEcC------CeEEEEEcccccc
Confidence 1 1111114444442 346666553 3455566665544
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.09 E-value=2.9e-08 Score=107.87 Aligned_cols=237 Identities=15% Similarity=0.147 Sum_probs=137.7
Q ss_pred CCEEEEEecC----CeEEEEc--CC-Cee--eEeEeecccceeEEEEecCCCEEEEEe-cCCCCcccccceeEEEEeCCC
Q 037368 35 RGKVVIGCDD----GAVSLLD--RG-LKF--NFGFQAHSSSVLFLQQLKQRNFLVTVG-EDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 35 ~~~l~~gs~d----G~i~~~d--~~-~~~--~~~~~~H~~~V~~i~~~~~~~~l~s~s-~D~~~~~~~~~~~vkvWdl~~ 104 (823)
+++|++++.+ |.|.+|+ .. ++. +.....+......+++ ++++|++++ .+++ |.+|++..
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~---------v~~~~~~~ 129 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGS---------ITVFPIGQ 129 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTE---------EEEEEBCT
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCE---------EEEEEeCC
Confidence 3468887765 8999997 32 543 3334445667788887 788877776 4555 99999974
Q ss_pred CCCCCCCCCCCceEEEEEeccC-CCC----CCceEEEEEecCCCCcceE-EEEEeCCeEEEEEcccccccc---cc-e--
Q 037368 105 MEPEGTSSTSPDCIGILRVFTS-QFP----EAKITSFLVLEEAPPILLI-AIGLDNGCIYCIKGDIARERI---TR-F-- 172 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-~~p----~~~v~~va~~~d~~~~~~i-a~G~~dG~V~l~~~~~~~~~~---~k-~-- 172 (823)
... ... ....+..... ..| ...+.+++|+||++. + +++..++.|.+|+.+. ..+ .+ .
T Consensus 130 ~g~----~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~---l~~~~~~~~~v~v~~~~~--~~~~~~~~~l~~ 198 (361)
T 3scy_A 130 DGA----LLP--ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY---LLADDLGTDQIHKFNINP--NANADNKEKFLT 198 (361)
T ss_dssp TSC----BCS--CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE---EEEEETTTTEEEEEEECT--TCCTTTCCCCEE
T ss_pred CCc----Ccc--cceeEEccCCCCCccccCCCcceEEEECCCCCE---EEEEeCCCCEEEEEEEcC--CCCcccccceee
Confidence 210 001 1111111110 000 123689999999985 5 4445588999997642 111 01 1
Q ss_pred -----eEEecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCC-CcceEE---ccCCCccceecccCCCeEE-Ee
Q 037368 173 -----KLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQP-PKRQFL---DNIGCSTNSVAMSDRLELI-IG 240 (823)
Q Consensus 173 -----~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~-~~~~~l---~~~~~~~~~~~~s~~~~li-v~ 240 (823)
.........+.+++|+|+|+ .+++++ ++.|.+|++.+.. .....+ ..+...+.+++|+|||+++ ++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~--~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGK--FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE
T ss_pred cccccceecCCCCCCeEEEEcCCCC--EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEE
Confidence 11222344578999999994 566665 4679999987432 111212 1222345688999999854 43
Q ss_pred -eC--CeEEEEecCC-CCc--c-cccc-C-CeEEEEe--eCcEEEEEEecCCCCccEEEEE--eCCCCEEEE
Q 037368 241 -RP--EAVYFYEVDG-RGP--C-WAFE-G-EKKLLGW--FRGYLLCVIADQRNSKNIFNVY--DLKNRLIAH 299 (823)
Q Consensus 241 -~~--~~I~i~~~~g-~~~--~-~~~~-g-~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~--D~~~~~i~~ 299 (823)
++ +.|.+|+++. .+. . ..+. + .+..++| .+.+|++... .+++|.+| |..++.+..
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~----~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR----DTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET----TTTEEEEEEECTTTCCEEE
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC----CCCCEEEEEEECCCCcEee
Confidence 34 5899999862 222 1 1121 2 3444554 5778877764 34789996 554554433
No 164
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=99.07 E-value=1.5e-13 Score=147.40 Aligned_cols=370 Identities=15% Similarity=0.202 Sum_probs=266.9
Q ss_pred HHHHHHh-ccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHHHHhhchhhHHHHHHH
Q 037368 337 LDMLFKK-NLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNY 415 (823)
Q Consensus 337 i~~L~~~-~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl~~~~~~~L~~Y 415 (823)
++.|+++ +..+-|.+.|++.+.| .++.+-|.-.++.+...+|++-|+++-....-.+||..=-..+.-+.|++|
T Consensus 31 ~~VL~e~i~~ldRa~eyA~~~n~p-----~VWs~LgkAqL~~~~v~eAIdsyIkA~Dps~y~eVi~~A~~~~~~edLv~y 105 (624)
T 3lvg_A 31 VQVLIEHIGNLDRAYEFAERCNEP-----AVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKY 105 (624)
T ss_dssp TTTCCGGGCCSTTTTTSSSSCCCC-----CCSSSHHHHTTTSSSCTTTTTSSCCCSCCCSSSHHHHHTTTSSCCTTHHHH
T ss_pred HHHHHHhccccHHHHHHHHHhCCc-----cHHHHHHHHHHccCchHHHHHHHHhCCChHHHHHHHHHHHhCCCHHHHHHH
Confidence 3444443 4567777778776654 467777888888899999999999985544456899998888999999999
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHH
Q 037368 416 LEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKI 495 (823)
Q Consensus 416 L~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~i 495 (823)
|.--++.. ..+...+.|+.||.|+++...|++||..++ .-|++.+=+-|-+.|.|+.|..|.....++.+.-..
T Consensus 106 L~MaRk~~-ke~~IDteLi~ayAk~~rL~elEefl~~~N-----~A~iq~VGDrcf~e~lYeAAKilys~isN~akLAst 179 (624)
T 3lvg_A 106 LQMARKKA-RESYVETELIFALAKTNRLAELEEFINGPN-----NAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLAST 179 (624)
T ss_dssp HHTTSTTC-CSTTTTHHHHHHHHTSCSSSTTTSTTSCCS-----SSCTHHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSS
T ss_pred HHHHHHHh-cccccHHHHHHHHHhhCcHHHHHHHHcCCC-----cccHHHHHHHHHHccCHHHHHHHHHhCccHHHHHHH
Confidence 98866543 344556678889999999999999999875 679999999999999999999999988888887777
Q ss_pred HHHhhcCHHHHHHHHhcCChHHHHHHH----HHHHHHHHhcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHHH
Q 037368 496 LLEDLGRYDEALQYISSLDPSQAGVTV----KEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVDF 571 (823)
Q Consensus 496 l~~~~~~~~~al~yl~~l~~~~~~~~i----~k~~~~Ll~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (823)
|+.- ++|..|++--++-....++.-+ .+-+ =++-...-++++++. .-....+
T Consensus 180 LV~L-~~yq~AVdaArKAns~ktWKeV~~ACvd~~--EfrLAqicGLniIvh---------------------adeL~el 235 (624)
T 3lvg_A 180 LVHL-GEYQAAVDGARKANSTRTWKEVCFACVDGK--EFRLAQMCGLHIVVH---------------------ADELEEL 235 (624)
T ss_dssp SSSC-SGGGSSTTTTTTCCSSCSHHHHTHHHHHSC--TTTTTTHHHHHHHCC---------------------SSCCSGG
T ss_pred HHHH-HHHHHHHHHHHhcCChhHHHHHHHHHhCch--HHHHHHHhcchhccc---------------------HHHHHHH
Confidence 7654 8999998877775443222111 0000 000111122222211 0012245
Q ss_pred Hhhhcc--CcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccccccCCcccccCcccccccccCCCCCCcccCCccccC
Q 037368 572 LNIFVH--HPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTAD 649 (823)
Q Consensus 572 ~~~f~~--~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 649 (823)
+..+.+ +.++++..||.-+.-.. . ...+++-|--||..+ .|
T Consensus 236 v~~YE~~G~f~ELIsLlEaglglEr--A-HmGmFTELaILYsKY---~P------------------------------- 278 (624)
T 3lvg_A 236 INYYQDRGYFEELITMLEAALGLER--A-HMGMFTELAILYSKF---KP------------------------------- 278 (624)
T ss_dssp GSSSSTTCCCTTSTTTHHHHTTSTT--C-CHHHHHHHHHHHHSS---CT-------------------------------
T ss_pred HHHHHhCCCHHHHHHHHHHHhCCCc--h-hHHHHHHHHHHHHhc---CH-------------------------------
Confidence 555543 56778888888774321 1 368999999999987 22
Q ss_pred CCCCCCCcchHHHHHHHHHHHhhcCCCCCCCCCCChhhHHHHHHhcCCchhHHHHHHHhccHHHHHHHHHhcCChhHHH-
Q 037368 650 GKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLI- 728 (823)
Q Consensus 650 ~~~~~~~~~~~~~~~kll~~L~~~~~~~~~~~~Yd~~~aL~lc~~~~~~~~~v~L~~k~g~~~~al~~~~~~~d~~~~i- 728 (823)
+|+++.|+. ..++-+.-++++.|....++++.||||.+-..|+.|...+|+. +..|.
T Consensus 279 --------------eKlmEHlkl------f~sriNipKviracE~ahLW~ElvfLY~~ydE~DnA~ltMi~h--~~~Aw~ 336 (624)
T 3lvg_A 279 --------------QKMREHLEL------FWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNH--PTDAWK 336 (624)
T ss_dssp --------------THHHHHHTT------SSSSSCCTTTHHHHTTTTCHHHHHHHHHHHTCHHHHHHTTTSC--HHHHCC
T ss_pred --------------HHHHHHHHH------HHHhccHHHHHHHHHHHhhHHHHHHHHhcchhHHHHHHHHHhC--Chhhcc
Confidence 799999998 5778889999999999999999999999999999988877753 11121
Q ss_pred -----HHHHHhCCCCCCCCcchHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCChHHHHHHhcCCCCcchHHHHHHHHH
Q 037368 729 -----ACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIAR 803 (823)
Q Consensus 729 -----~~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~~~~i~~~L~~i~~~~~l~p~~vl~~l~~~~~~~~~~vk~~l~~ 803 (823)
+.+-+.+ +.+++-++++|++...+. .+.++|.-+.. .|++-.|++++.+++. +..||+||..
T Consensus 337 h~~Fkdii~KVa------N~EiyYKAi~FYL~e~P~---lL~DLL~vL~p--rlDh~RvV~~~~k~~~--LpLIkpYL~~ 403 (624)
T 3lvg_A 337 EGQFKDIITKVA------NVELYYRAIQFYLEFKPL---LLNDLLMVLSP--RLDHTRAVNYFSKVKQ--LPLVKPYLRS 403 (624)
T ss_dssp GGGGTTTGGGCS------CSHHHHHHHHHHTTSCCT---TSHHHHHHHCT--TCCSTTTHHHHHTTTC--GGGGTGGGTS
T ss_pred HHHHHHHHHHcc------hHHHHHHHHHHHHHhChH---HHHHHHHhccc--cCChHHHHHHHHhcCC--chhhHHHHHH
Confidence 2223333 569999999999986443 35677775543 5899999999997776 6679999987
Q ss_pred HHHHHHHHHH
Q 037368 804 KLEQESKLIE 813 (823)
Q Consensus 804 ~l~~~~~~i~ 813 (823)
...+.++.++
T Consensus 404 Vq~~N~~aVN 413 (624)
T 3lvg_A 404 VQNHNNKSVN 413 (624)
T ss_dssp CCCSCCHHHH
T ss_pred HHHhhHHHHH
Confidence 7655555554
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.06 E-value=4.5e-08 Score=102.61 Aligned_cols=225 Identities=10% Similarity=0.107 Sum_probs=142.7
Q ss_pred eEEEee-CCCEE-EEEecCCeEEEEcCCCeeeEeEee------cccceeEEEEe-cCCCEEEEEec-CCCCcccccceeE
Q 037368 28 ITCCSS-GRGKV-VIGCDDGAVSLLDRGLKFNFGFQA------HSSSVLFLQQL-KQRNFLVTVGE-DEQVSAQQSAVCL 97 (823)
Q Consensus 28 is~~~~-~~~~l-~~gs~dG~i~~~d~~~~~~~~~~~------H~~~V~~i~~~-~~~~~l~s~s~-D~~~~~~~~~~~v 97 (823)
..+++. +++.+ ++++.++.|.+||.+++.+..+.. |...+..++++ ++++++++... ++. |
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~---------i 102 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ---------I 102 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE---------E
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE---------E
Confidence 555554 34445 555788999999977887777753 44578999995 67777777643 665 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV- 176 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~- 176 (823)
.+||... ..+..+.... ...+.+++++|+++. +++...++.|.+|+.+ +.....+.
T Consensus 103 ~~~d~~g-----------~~~~~~~~~~----~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----g~~~~~~~~ 159 (286)
T 1q7f_A 103 QIYNQYG-----------QFVRKFGATI----LQHPRGVTVDNKGRI---IVVECKVMRVIIFDQN-----GNVLHKFGC 159 (286)
T ss_dssp EEECTTS-----------CEEEEECTTT----CSCEEEEEECTTSCE---EEEETTTTEEEEECTT-----SCEEEEEEC
T ss_pred EEECCCC-----------cEEEEecCcc----CCCceEEEEeCCCCE---EEEECCCCEEEEEcCC-----CCEEEEeCC
Confidence 9999542 1343432111 123899999999988 8887778999999742 21222222
Q ss_pred -cCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCC--CccceecccCCCeEEEee--CC-eEEEE
Q 037368 177 -DNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIG--CSTNSVAMSDRLELIIGR--PE-AVYFY 248 (823)
Q Consensus 177 -~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~--~~~~~~~~s~~~~liv~~--~~-~I~i~ 248 (823)
.....+.+|+++++| . ++++. +++|.+|+..++ ....+...+ ..+..++++++|.++++. ++ .|.+|
T Consensus 160 ~~~~~~p~~i~~~~~g--~-l~v~~~~~~~i~~~~~~g~--~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQ--E-IFISDNRAHCVKVFNYEGQ--YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp TTTCSSEEEEEECSSS--E-EEEEEGGGTEEEEEETTCC--EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCccCCcEEEEECCCC--C-EEEEECCCCEEEEEcCCCC--EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 123457899999988 4 55553 567999997643 334443333 356678999999877654 34 89999
Q ss_pred ecCCCCcc-ccccC---CeEEEEeeC-cEEEEEEecCCCCccEEEEEeCCC
Q 037368 249 EVDGRGPC-WAFEG---EKKLLGWFR-GYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 249 ~~~g~~~~-~~~~g---~~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+.+|+... +.... .+..+++.. ..+++.+ .+++|+||+...
T Consensus 235 ~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-----~~~~v~v~~~~~ 280 (286)
T 1q7f_A 235 TQDGQLISALESKVKHAQCFDVALMDDGSVVLAS-----KDYRLYIYRYVQ 280 (286)
T ss_dssp CTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-----TTTEEEEEECSC
T ss_pred CCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC-----CCCeEEEEEccc
Confidence 98764211 11111 134555542 2344333 357999998753
No 166
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.06 E-value=8.6e-09 Score=110.12 Aligned_cols=185 Identities=10% Similarity=0.056 Sum_probs=121.9
Q ss_pred eCCC-EE-EEEecCCeEEEEc-CCCeeeEeEee-c----ccceeEEEEecCCCEEEEEe------------cCCCCcccc
Q 037368 33 SGRG-KV-VIGCDDGAVSLLD-RGLKFNFGFQA-H----SSSVLFLQQLKQRNFLVTVG------------EDEQVSAQQ 92 (823)
Q Consensus 33 ~~~~-~l-~~gs~dG~i~~~d-~~~~~~~~~~~-H----~~~V~~i~~~~~~~~l~s~s------------~D~~~~~~~ 92 (823)
++++ .+ ++++.++.|.+|| .+++.+..+.. + ...+..+.++|+|+.|++++ .|+.
T Consensus 42 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~----- 116 (337)
T 1pby_B 42 APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR----- 116 (337)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE-----
T ss_pred cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce-----
Confidence 3444 55 5566789999999 67787766663 2 33788999999999988885 4565
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcc---cccc--
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGD---IARE-- 167 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~---~~~~-- 167 (823)
|.+||+... ..++.+... ..+.+++|+||++. ++++ ++.|.+|+.. ..+.
T Consensus 117 ----i~v~d~~~~----------~~~~~~~~~------~~~~~~~~s~dg~~---l~~~--~~~i~~~d~~~~~~~~~~~ 171 (337)
T 1pby_B 117 ----VALYDAETL----------SRRKAFEAP------RQITMLAWARDGSK---LYGL--GRDLHVMDPEAGTLVEDKP 171 (337)
T ss_dssp ----EEEEETTTT----------EEEEEEECC------SSCCCEEECTTSSC---EEEE--SSSEEEEETTTTEEEEEEC
T ss_pred ----EEEEECCCC----------cEEEEEeCC------CCcceeEECCCCCE---EEEe--CCeEEEEECCCCcEeeeee
Confidence 999999742 244444421 22788999999998 8887 7899999843 1000
Q ss_pred ccc--ce-----------------------------------------e-EEec-------------CCCCcceEEEeec
Q 037368 168 RIT--RF-----------------------------------------K-LQVD-------------NQCSVMGLGFRVD 190 (823)
Q Consensus 168 ~~~--k~-----------------------------------------~-~~~~-------------~~~~It~l~fs~d 190 (823)
... .. . .++. ....+.+++|+|+
T Consensus 172 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d 251 (337)
T 1pby_B 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA 251 (337)
T ss_dssp STTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCC
Confidence 000 00 0 0010 1123557999999
Q ss_pred CCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEe-eCCeEEEEecCC
Q 037368 191 GQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIG-RPEAVYFYEVDG 252 (823)
Q Consensus 191 g~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~-~~~~I~i~~~~g 252 (823)
|+ .++++ ++.|.+||+.+.. ....+. .+..+.+++|+|+|+ ++++ .++.|.+|++.+
T Consensus 252 g~--~l~~~-~~~v~~~d~~~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 252 KT--RAFGA-YNVLESFDLEKNA-SIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp SS--EEEEE-ESEEEEEETTTTE-EEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CC--EEEEe-CCeEEEEECCCCc-Ccceec-CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 84 56666 6789999987532 333443 334567889999987 4444 346899999874
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.05 E-value=1.4e-08 Score=109.08 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=97.8
Q ss_pred EEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceE-
Q 037368 70 LQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI- 148 (823)
Q Consensus 70 i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i- 148 (823)
+++.+++.++++++.|++ |.+||+.+. .+++++.... .. .+..++|+||++. +
T Consensus 5 ~~~~~~~~~~v~~~~~~~---------v~~~d~~~~----------~~~~~~~~~~-~~---~~~~~~~s~dg~~---~~ 58 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNN---------LHVVDVASD----------TVYKSCVMPD-KF---GPGTAMMAPDNRT---AY 58 (349)
T ss_dssp CCCCTTCEEEEEEETTTE---------EEEEETTTT----------EEEEEEECSS-CC---SSCEEEECTTSSE---EE
T ss_pred ccccCCCEEEEEeCCCCe---------EEEEECCCC----------cEEEEEecCC-CC---CCceeEECCCCCE---EE
Confidence 456778889999999998 999999742 3555555321 11 2689999999975 5
Q ss_pred EEEEeCCeEEEEEcccccccccceeEEecCC------CCcceEEEeecCCeEEEEEEc-------------CCeEEEEEe
Q 037368 149 AIGLDNGCIYCIKGDIARERITRFKLQVDNQ------CSVMGLGFRVDGQALQLFAVT-------------PNSVILFSL 209 (823)
Q Consensus 149 a~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~------~~It~l~fs~dg~~~~l~~~t-------------~~~V~~~d~ 209 (823)
+++..+|.|.+|+.. .+.....+.... ..+.+++|+|+|+ .+++++ .+.|.+||+
T Consensus 59 v~~~~~~~i~~~d~~----t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 59 VLNNHYGDIYGIDLD----TCKNTFHANLSSVPGEVGRSMYSFAISPDGK--EVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp EEETTTTEEEEEETT----TTEEEEEEESCCSTTEEEECSSCEEECTTSS--EEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred EEeCCCCcEEEEeCC----CCcEEEEEEcccccccccccccceEECCCCC--EEEEEcccccccccccccCCCeEEEEEC
Confidence 445568999999863 111112222122 2388999999995 565555 367999998
Q ss_pred cCCC--CcceEEccCCCccceecccCCCeEEEeeCCeEEEEecC
Q 037368 210 QNQP--PKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVD 251 (823)
Q Consensus 210 ~~~~--~~~~~l~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~ 251 (823)
.+.. .....+.. ...+.+++|+|+|+++++ ++.|++|++.
T Consensus 133 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~l~~~-~~~i~~~d~~ 174 (349)
T 1jmx_B 133 ADGLEAKPVRTFPM-PRQVYLMRAADDGSLYVA-GPDIYKMDVK 174 (349)
T ss_dssp GGGGGBCCSEEEEC-CSSCCCEEECTTSCEEEE-SSSEEEECTT
T ss_pred CCccccceeeeccC-CCcccceeECCCCcEEEc-cCcEEEEeCC
Confidence 7532 12233332 234678889999995554 4459999875
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.05 E-value=2.6e-08 Score=104.46 Aligned_cols=191 Identities=12% Similarity=0.124 Sum_probs=129.8
Q ss_pred CeEEEee--CCCEEEEEec--CCeEEEEcCCCeeeEeEee-cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 27 NITCCSS--GRGKVVIGCD--DGAVSLLDRGLKFNFGFQA-HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 27 ~is~~~~--~~~~l~~gs~--dG~i~~~d~~~~~~~~~~~-H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
.+.+++. .++.+++++. ++.|.+|+.+++.++.+.. +...+..|+++|+|+++++.+.++. |.+||
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~---------i~~~~ 148 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMR---------VIIFD 148 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTE---------EEEEC
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCE---------EEEEc
Confidence 3555555 4677776663 8999999988888777754 3467899999999998888877776 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecC--C
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDN--Q 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~--~ 179 (823)
... ..+..+...... ..+.+++++|+++. +++...++.|.+|+.+ +.....+... -
T Consensus 149 ~~g-----------~~~~~~~~~~~~---~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----g~~~~~~~~~g~~ 206 (286)
T 1q7f_A 149 QNG-----------NVLHKFGCSKHL---EFPNGVVVNDKQEI---FISDNRAHCVKVFNYE-----GQYLRQIGGEGIT 206 (286)
T ss_dssp TTS-----------CEEEEEECTTTC---SSEEEEEECSSSEE---EEEEGGGTEEEEEETT-----CCEEEEESCTTTS
T ss_pred CCC-----------CEEEEeCCCCcc---CCcEEEEECCCCCE---EEEECCCCEEEEEcCC-----CCEEEEEccCCcc
Confidence 652 133343311111 23899999999988 8888889999999852 2222222211 2
Q ss_pred CCcceEEEeecCCeEEEEEEc-CC-eEEEEEecCCCCcceEEccCC--CccceecccCCCeEEEee-CCeEEEEecCC
Q 037368 180 CSVMGLGFRVDGQALQLFAVT-PN-SVILFSLQNQPPKRQFLDNIG--CSTNSVAMSDRLELIIGR-PEAVYFYEVDG 252 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t-~~-~V~~~d~~~~~~~~~~l~~~~--~~~~~~~~s~~~~liv~~-~~~I~i~~~~g 252 (823)
..+.+|+++++| .++++.. ++ +|.+|+.+++ ....+..+. ..+.+++++|+|+++++. ++.|++|+...
T Consensus 207 ~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 207 NYPIGVGINSNG--EILIADNHNNFNLTIFTQDGQ--LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CSEEEEEECTTC--CEEEEECSSSCEEEEECTTSC--EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCcEEEECCCC--CEEEEeCCCCEEEEEECCCCC--EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 468899999998 3344343 33 7999996543 334443222 235578899999977654 56899998764
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.04 E-value=2.1e-08 Score=109.53 Aligned_cols=238 Identities=7% Similarity=-0.006 Sum_probs=143.0
Q ss_pred CeEEEee-CC-CEEEEEecCCeEEEEc-C-CCeeeEeEeec-ccceeEEEEecCCCE--EEEEe-------------cCC
Q 037368 27 NITCCSS-GR-GKVVIGCDDGAVSLLD-R-GLKFNFGFQAH-SSSVLFLQQLKQRNF--LVTVG-------------EDE 86 (823)
Q Consensus 27 ~is~~~~-~~-~~l~~gs~dG~i~~~d-~-~~~~~~~~~~H-~~~V~~i~~~~~~~~--l~s~s-------------~D~ 86 (823)
.++.++. ++ ++|++++.+ .|.+|+ . ++++....... .+.+.+++++|+|++ +++++ .++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 4544444 44 467787777 999999 4 67765433321 144677999999994 55553 577
Q ss_pred CCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEcccc
Q 037368 87 QVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIA 165 (823)
Q Consensus 87 ~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~ 165 (823)
+ +++|++... + .+...+...... ....+.+++|+|||+. ++++. .++.|.+|+.+-
T Consensus 120 ~---------v~v~~~~~~-------g--~~~~~~~~~~~~-~~~~~~~~~~spdG~~---l~~~~~~~~~v~~~~~~~- 176 (365)
T 1jof_A 120 Y---------GNVFSVSET-------G--KLEKNVQNYEYQ-ENTGIHGMVFDPTETY---LYSADLTANKLWTHRKLA- 176 (365)
T ss_dssp E---------EEEEEECTT-------C--CEEEEEEEEECC-TTCCEEEEEECTTSSE---EEEEETTTTEEEEEEECT-
T ss_pred e---------EEEEccCCC-------C--cCcceEeeEEeC-CCCcceEEEECCCCCE---EEEEcCCCCEEEEEEECC-
Confidence 6 999999731 1 133333321100 0123899999999987 77654 467999998631
Q ss_pred cccccceeE---Ee-c-CCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCC-CCcc---eEE---ccC--C-C----
Q 037368 166 RERITRFKL---QV-D-NQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQ-PPKR---QFL---DNI--G-C---- 224 (823)
Q Consensus 166 ~~~~~k~~~---~~-~-~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~-~~~~---~~l---~~~--~-~---- 224 (823)
..+... +. . +...+.+++|+|+|+ .+++++ ++.|.+|+++.. +... ..+ ... + .
T Consensus 177 ---~g~~~~~~~~~~~~~g~~p~~~~~spdg~--~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 251 (365)
T 1jof_A 177 ---SGEVELVGSVDAPDPGDHPRWVAMHPTGN--YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp ---TSCEEEEEEEECSSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred ---CCCEEEeeeEecCCCCCCCCEeEECCCCC--EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccc
Confidence 112211 11 1 134588999999994 566665 357999987532 2221 112 111 1 1
Q ss_pred ---ccceec-ccCCCeEE-Ee-e-CC-----eEEEEecCCCCccc----cccC-----CeEEEEe---eCcEEEEEEecC
Q 037368 225 ---STNSVA-MSDRLELI-IG-R-PE-----AVYFYEVDGRGPCW----AFEG-----EKKLLGW---FRGYLLCVIADQ 280 (823)
Q Consensus 225 ---~~~~~~-~s~~~~li-v~-~-~~-----~I~i~~~~g~~~~~----~~~g-----~~~~i~~---~~~ylv~~s~d~ 280 (823)
.+..++ |+|||+++ ++ + ++ .|.+|+++..+... .... ....+++ ++.+|+++..
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~-- 329 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD-- 329 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS--
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc--
Confidence 366788 99999754 43 2 24 89999985333221 1211 1234566 6888877753
Q ss_pred CCCccEEEEEeCCCCEE
Q 037368 281 RNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 281 ~~~~~~I~I~D~~~~~i 297 (823)
.+++|.||+++.+.+
T Consensus 330 --~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 330 --QEGWLEIYRWKDEFL 344 (365)
T ss_dssp --SSCEEEEEEEETTEE
T ss_pred --CCCeEEEEEEchhhC
Confidence 247999999877644
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.02 E-value=3.8e-08 Score=118.25 Aligned_cols=233 Identities=8% Similarity=0.037 Sum_probs=135.4
Q ss_pred eCC-CEEEEEecC---------CeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 33 SGR-GKVVIGCDD---------GAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 33 ~~~-~~l~~gs~d---------G~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
+++ ++|++++.+ |.+.+|| .+++.. .+..|.+.+...+|+|+|+.||.+++ +. |.+|+
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~-~~---------i~~~~ 138 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWN-ND---------IYVKI 138 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEET-TE---------EEEES
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEEC-Ce---------EEEEE
Confidence 444 578888876 6677999 556544 67788889999999999999999865 55 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccC------CCCC--------CceEEEEEecCCCCcceEEEEEeCCe-EE--------
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTS------QFPE--------AKITSFLVLEEAPPILLIAIGLDNGC-IY-------- 158 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~------~~p~--------~~v~~va~~~d~~~~~~ia~G~~dG~-V~-------- 158 (823)
+.... +.+ +...+. ..|+ +...+++|||||+. ||.++.|.+ |.
T Consensus 139 ~~~~~----------~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~---la~~~~d~~~v~~~~~~~~~ 204 (740)
T 4a5s_A 139 EPNLP----------SYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF---LAYAQFNDTEVPLIEYSFYS 204 (740)
T ss_dssp STTSC----------CEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE---EEEEEEECTTCCEEEEEECC
T ss_pred CCCCc----------eEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCE---EEEEEEcccCCceEEEEeec
Confidence 87432 111 110000 0010 11346899999999 998865433 33
Q ss_pred ---------------------------EEEccccccc---cc--ceeEEec------CCCCcceEEEeecCCeEEEEEEc
Q 037368 159 ---------------------------CIKGDIARER---IT--RFKLQVD------NQCSVMGLGFRVDGQALQLFAVT 200 (823)
Q Consensus 159 ---------------------------l~~~~~~~~~---~~--k~~~~~~------~~~~It~l~fs~dg~~~~l~~~t 200 (823)
+|+.+ . +. +...+.. +..-|+.++|+|||+ .++++..
T Consensus 205 ~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~ 279 (740)
T 4a5s_A 205 DESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD----SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLR 279 (740)
T ss_dssp STTCSSCEEEEEECCBTTSCCCEEEEEEEETT----SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEE
T ss_pred CCCCCCCcceeecCCCCcCcCCeeEEEEEECC----CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeC
Confidence 33321 1 10 1222221 344588999999994 3444443
Q ss_pred CC----eEEEEEecCCC-----C-cceEE-ccCCCccc-----eecccCCCeE-E-Eee--C--CeEEEEecCCCCcccc
Q 037368 201 PN----SVILFSLQNQP-----P-KRQFL-DNIGCSTN-----SVAMSDRLEL-I-IGR--P--EAVYFYEVDGRGPCWA 258 (823)
Q Consensus 201 ~~----~V~~~d~~~~~-----~-~~~~l-~~~~~~~~-----~~~~s~~~~l-i-v~~--~--~~I~i~~~~g~~~~~~ 258 (823)
.. .|++||+.+.. . ....+ +.+...+. ...|+|||+. + ..+ + ..|++|+.+|......
T Consensus 280 r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 22 49999987643 0 12222 33443333 6789999973 3 332 2 3688999886533222
Q ss_pred ccCC--e-EEEEeeCcEEEEEEec--CCCCccEEEEEeCCCC
Q 037368 259 FEGE--K-KLLGWFRGYLLCVIAD--QRNSKNIFNVYDLKNR 295 (823)
Q Consensus 259 ~~g~--~-~~i~~~~~ylv~~s~d--~~~~~~~I~I~D~~~~ 295 (823)
..|. . ....+++.+|+..+.. ..+....|...++.++
T Consensus 360 T~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 360 TKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp CCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred ccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 2332 2 2344667777766543 2123345666666654
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.97 E-value=9.9e-08 Score=112.88 Aligned_cols=198 Identities=13% Similarity=0.075 Sum_probs=121.5
Q ss_pred CCeEEEeeCCCEEEEEe----cCCeEEEEc-CCCeeeEeEeeccccee---------EEEEe--cCCCE-EEEEecC-CC
Q 037368 26 GNITCCSSGRGKVVIGC----DDGAVSLLD-RGLKFNFGFQAHSSSVL---------FLQQL--KQRNF-LVTVGED-EQ 87 (823)
Q Consensus 26 ~~is~~~~~~~~l~~gs----~dG~i~~~d-~~~~~~~~~~~H~~~V~---------~i~~~--~~~~~-l~s~s~D-~~ 87 (823)
..++....+++.++..+ .+|...+|. ..+...+.+..|...|. ...++ |+|+. |+.++.. ..
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~ 103 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQR 103 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCC
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCe
Confidence 34666666666554433 378899998 44444556777776666 56565 99998 7766553 22
Q ss_pred CcccccceeEEEEeCC--C-CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----------
Q 037368 88 VSAQQSAVCLKVFDLD--K-MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN---------- 154 (823)
Q Consensus 88 ~~~~~~~~~vkvWdl~--~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d---------- 154 (823)
|.+|++. . . .+ +.+...........+.+++|+|||+. ||+++.+
T Consensus 104 ---------l~~~~~~~~g~~--------~~---~~l~~~~~~~~~~~~~~~~~spDg~~---l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 104 ---------LYAFEPDAPGGA--------VP---RPLTPVSAVGGGLRWADPVLLPERGE---VWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp ---------EEEECTTSTTCC--------CC---EECSCCCCSTTCEEEEEEEEETTTTE---EEEEEEEECSSSTTCEE
T ss_pred ---------EEEEcCCCCCCC--------CC---EeccCCccCCCCccccCcEECCCCCE---EEEEEecccCCCCCCce
Confidence 6556654 1 1 11 12211000000123889999999999 9988876
Q ss_pred CeEEEEEcccccccc-----cceeEEe-cCCCCcceEEEeecCCeEEEEEEcC--------CeEEEEEecCCC---Ccce
Q 037368 155 GCIYCIKGDIARERI-----TRFKLQV-DNQCSVMGLGFRVDGQALQLFAVTP--------NSVILFSLQNQP---PKRQ 217 (823)
Q Consensus 155 G~V~l~~~~~~~~~~-----~k~~~~~-~~~~~It~l~fs~dg~~~~l~~~t~--------~~V~~~d~~~~~---~~~~ 217 (823)
..|.+|+.+ .+ ...+.+. .+...+.+++|||||+ .+++++.+ ..|++|++.+.+ ....
T Consensus 161 ~~i~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLD----GSAAADRSAVRELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETT----STTTTCGGGSEESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECC----CCccccCCceeEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 477788753 10 2344445 5556788999999996 34444433 259999997422 2333
Q ss_pred EEccCCCccceecccCCCeEEEeeC--C--eEEEEecC
Q 037368 218 FLDNIGCSTNSVAMSDRLELIIGRP--E--AVYFYEVD 251 (823)
Q Consensus 218 ~l~~~~~~~~~~~~s~~~~liv~~~--~--~I~i~~~~ 251 (823)
+..++...+....|+|||++++.++ + .|+.|+..
T Consensus 236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 4444456677889999998665433 3 57777764
No 172
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.96 E-value=7.9e-07 Score=93.08 Aligned_cols=265 Identities=10% Similarity=0.016 Sum_probs=162.9
Q ss_pred CCeEEEee-CCCEEEEEec-CCeEEEEcCCCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 26 GNITCCSS-GRGKVVIGCD-DGAVSLLDRGLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs~-dG~i~~~d~~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
..+.+++. +++.+++++. +|.|..||..++. ..+. .+...+..|+++++|.+.++...++. |..||
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~---------i~~~~ 84 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDGKI-TEYPLPTPDAKVMCLTISSDGEVWFTENAANK---------IGRIT 84 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTE---------EEEEC
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCCCe-EEecCCcccCceeeEEECCCCCEEEeCCCCCe---------EEEEC
Confidence 35667765 4567777775 7899999966543 3443 34568999999999998888776776 88898
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQC 180 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~ 180 (823)
... . ...+... .+...+.+++++|++.. .+++..++.|..|+.+ +....... ....
T Consensus 85 ~~g---------~---~~~~~~~---~~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~d~~-----g~~~~~~~~~~~~ 141 (299)
T 2z2n_A 85 KKG---------I---IKEYTLP---NPDSAPYGITEGPNGDI---WFTEMNGNRIGRITDD-----GKIREYELPNKGS 141 (299)
T ss_dssp TTS---------C---EEEEECS---STTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-----CCEEEEECSSTTC
T ss_pred CCC---------c---EEEEeCC---CcCCCceeeEECCCCCE---EEEecCCceEEEECCC-----CCEEEecCCCCCC
Confidence 752 1 2222211 11133899999999877 7766667889888642 11111111 2235
Q ss_pred CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceE-EccCCCccceecccCCCeEEEee--CCeEEEEecCCCCc
Q 037368 181 SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQF-LDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGRGP 255 (823)
Q Consensus 181 ~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~-l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~~~ 255 (823)
.+.++.+.++| . +++++ .++|..|+..++ .... +......+.+++++++|.+.++. ++.|..|+..++..
T Consensus 142 ~~~~i~~~~~g--~-l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 216 (299)
T 2z2n_A 142 YPSFITLGSDN--A-LWFTENQNNAIGRITESGD--ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEIT 216 (299)
T ss_dssp CEEEEEECTTS--C-EEEEETTTTEEEEECTTCC--EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEE
T ss_pred CCceEEEcCCC--C-EEEEeCCCCEEEEEcCCCc--EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEE
Confidence 68899999888 3 44443 357999987322 2222 22233456678888999877765 46899999854422
Q ss_pred ccccc---CCeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCEEEEecc--ccceeEEEeecCcEEEEEcCCeEEEEe
Q 037368 256 CWAFE---GEKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLIAHSLV--VKEVSHMLCEWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 256 ~~~~~---g~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~--i~~v~~v~~~~~~~~vvs~~~~v~~l~ 329 (823)
.+... ..+..+....+ .+.++.. ..+.|.+||+.++...+... ...+..+....+.+|+.+..+.++++.
T Consensus 217 ~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAGAGIDLWFTEW----GANKIGRLTSNNIIEEYPIQIKSAEPHGICFDGETIWFAMECDKIGKLT 292 (299)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEET----TTTEEEEEETTTEEEEEECSSSSCCEEEEEECSSCEEEEETTTEEEEEE
T ss_pred EEECCCCCCCceeEEECCCCCEEEecc----CCceEEEECCCCceEEEeCCCCCCccceEEecCCCEEEEecCCcEEEEE
Confidence 22222 22455555432 3333331 24789999996554444321 223444422677788887778898886
Q ss_pred ecC
Q 037368 330 EKD 332 (823)
Q Consensus 330 ~~~ 332 (823)
+..
T Consensus 293 ~~~ 295 (299)
T 2z2n_A 293 LIK 295 (299)
T ss_dssp EC-
T ss_pred cCc
Confidence 543
No 173
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.94 E-value=1.9e-08 Score=120.35 Aligned_cols=231 Identities=9% Similarity=-0.021 Sum_probs=132.6
Q ss_pred eEEEe-eCC-CEEEEEec---------CCeEEEEc-CCCeee--EeEeecccceeEEEEecCCCEEEEEecCCCCccccc
Q 037368 28 ITCCS-SGR-GKVVIGCD---------DGAVSLLD-RGLKFN--FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQS 93 (823)
Q Consensus 28 is~~~-~~~-~~l~~gs~---------dG~i~~~d-~~~~~~--~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~ 93 (823)
+.+.+ +++ ++|++++. +++|++|| .+++.+ ..+ ...|..++|+|+|+.||+++ |++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~------ 131 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNN------ 131 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTE------
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCe------
Confidence 54444 344 57888876 79999999 556652 222 35799999999999999987 555
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccC------CCCC--------CceEEEEEecCCCCcceEEEEEeCC----
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTS------QFPE--------AKITSFLVLEEAPPILLIAIGLDNG---- 155 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~------~~p~--------~~v~~va~~~d~~~~~~ia~G~~dG---- 155 (823)
|++|++.... +.+ +..... ..|+ ....+++|+|||+. ||+++.|+
T Consensus 132 ---i~~~~~~~g~----------~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~---la~~~~d~~~~~ 194 (719)
T 1z68_A 132 ---IYLKQRPGDP----------PFQ-ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF---LAYAEFNDTDIP 194 (719)
T ss_dssp ---EEEESSTTSC----------CEE-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE---EEEEEEECTTSC
T ss_pred ---EEEEeCCCCC----------cEE-EecCCCcCCeEcccccceeeeecccCcccEEECCCCCE---EEEEEECCCCCc
Confidence 9999997432 111 110000 0010 01258999999999 99988652
Q ss_pred ------------------------------eEEEEEcccccccccc---eeE-----EecCCCCcceEEEeecCCeEEEE
Q 037368 156 ------------------------------CIYCIKGDIARERITR---FKL-----QVDNQCSVMGLGFRVDGQALQLF 197 (823)
Q Consensus 156 ------------------------------~V~l~~~~~~~~~~~k---~~~-----~~~~~~~It~l~fs~dg~~~~l~ 197 (823)
+|.+|+.. .+.. ..+ +..+...|.+++|+||+ .+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~--~~~~ 268 (719)
T 1z68_A 195 VIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT----YPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE--RVCL 268 (719)
T ss_dssp EEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS----CHHHHCCEECCCCHHHHTSCEEEEEEEESSSS--EEEE
T ss_pred eEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC----CCCccceeEccCCccCCCCcceEEEeEEeCCC--eEEE
Confidence 56677643 1110 011 11245678999999997 4555
Q ss_pred EEcC-C----eEEEEE----ecCCCCcceEE----ccCCCccc-----eecccCCCeE-EE-ee--CC--eEEEEecCCC
Q 037368 198 AVTP-N----SVILFS----LQNQPPKRQFL----DNIGCSTN-----SVAMSDRLEL-II-GR--PE--AVYFYEVDGR 253 (823)
Q Consensus 198 ~~t~-~----~V~~~d----~~~~~~~~~~l----~~~~~~~~-----~~~~s~~~~l-iv-~~--~~--~I~i~~~~g~ 253 (823)
...+ . .|++|| ..+. ....++ ..+...+. +..|+|||+. ++ +. ++ .|++|+..+.
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST
T ss_pred EEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC
Confidence 5332 1 388888 5432 222333 34444455 6789999973 22 22 22 5788887653
Q ss_pred CccccccCC---eE-EEEeeCcEEEEEEecCCCCccEEEEEeCC
Q 037368 254 GPCWAFEGE---KK-LLGWFRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 254 ~~~~~~~g~---~~-~i~~~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
. ...+..+ .. ...|.+..++..+.+.....++..||.+.
T Consensus 348 ~-~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 348 N-AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp T-CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred c-eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEe
Confidence 3 2222211 11 22335667766653200013567777653
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.92 E-value=1.3e-07 Score=103.17 Aligned_cols=184 Identities=11% Similarity=0.014 Sum_probs=116.7
Q ss_pred cCCeEEEEc-C-CCeeeEeEee----cccceeEEEEecCCCEEEEEec-CCCCcccccceeEEEEeCC-CCCCCCCCCCC
Q 037368 43 DDGAVSLLD-R-GLKFNFGFQA----HSSSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCLKVFDLD-KMEPEGTSSTS 114 (823)
Q Consensus 43 ~dG~i~~~d-~-~~~~~~~~~~----H~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~-~~~~~~~~~~~ 114 (823)
.+|++.+|+ . ++++...+.. +...+.+++|+|+|++|+++.. +++ |++|++. .. .
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~---------v~~~~~~~~g--------~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK---------LWTHRKLASG--------E 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE---------EEEEEECTTS--------C
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE---------EEEEEECCCC--------C
Confidence 689999999 3 5666544442 4568999999999998887653 444 9999997 22 1
Q ss_pred CceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe-CCeEEEEEcccccccccc---eeEEec---C-C--C----
Q 037368 115 PDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD-NGCIYCIKGDIARERITR---FKLQVD---N-Q--C---- 180 (823)
Q Consensus 115 ~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~-dG~V~l~~~~~~~~~~~k---~~~~~~---~-~--~---- 180 (823)
...+..+.... ++..+..++|+||++. ++++.. +++|.+|+.+. +.+.. ...+.. + . .
T Consensus 180 ~~~~~~~~~~~---~g~~p~~~~~spdg~~---l~v~~~~~~~v~v~~~~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~ 251 (365)
T 1jof_A 180 VELVGSVDAPD---PGDHPRWVAMHPTGNY---LYALMEAGNRICEYVIDP--ATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp EEEEEEEECSS---TTCCEEEEEECTTSSE---EEEEETTTTEEEEEEECT--TTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred EEEeeeEecCC---CCCCCCEeEECCCCCE---EEEEECCCCeEEEEEEeC--CCCcEEEccceEEcCCCCcCCcccccc
Confidence 11122222110 0133899999999988 877764 68999997542 11111 111211 1 1 1
Q ss_pred ---CcceEE-EeecCCeEEEEEEc--CC-----eEEEEEecCCCCcce---EEccCCCccceecccC---CCeEE-Eee-
Q 037368 181 ---SVMGLG-FRVDGQALQLFAVT--PN-----SVILFSLQNQPPKRQ---FLDNIGCSTNSVAMSD---RLELI-IGR- 241 (823)
Q Consensus 181 ---~It~l~-fs~dg~~~~l~~~t--~~-----~V~~~d~~~~~~~~~---~l~~~~~~~~~~~~s~---~~~li-v~~- 241 (823)
.+.+++ |+|||+ .|++++ .+ .|.+|++...+.... ....++..+..++|+| +|+++ ++.
T Consensus 252 ~~~~~~~i~~~spdG~--~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 252 KGLYRADVCALTFSGK--YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp SBSEEEEEEEECTTSS--EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred cccccccEEEECCCCC--EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence 478999 999995 566664 23 799999963333332 1333455667788999 67654 443
Q ss_pred C-CeEEEEecCCC
Q 037368 242 P-EAVYFYEVDGR 253 (823)
Q Consensus 242 ~-~~I~i~~~~g~ 253 (823)
+ +.|.+|++++.
T Consensus 330 ~~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 QEGWLEIYRWKDE 342 (365)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCeEEEEEEchh
Confidence 2 68999998753
No 175
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.90 E-value=6.4e-08 Score=112.76 Aligned_cols=222 Identities=10% Similarity=-0.010 Sum_probs=133.6
Q ss_pred CeEEEeeCCCEE-EEEec---CCeEEEEc--C--CCeeeEeEeecccceeEEEEecCCC--EEEEEecCCCCccccccee
Q 037368 27 NITCCSSGRGKV-VIGCD---DGAVSLLD--R--GLKFNFGFQAHSSSVLFLQQLKQRN--FLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 27 ~is~~~~~~~~l-~~gs~---dG~i~~~d--~--~~~~~~~~~~H~~~V~~i~~~~~~~--~l~s~s~D~~~~~~~~~~~ 96 (823)
.+.+.+.+++.+ ++++. ++...+|. . .+... .+..+. .+...+++|+|+ .+++.+.|+
T Consensus 66 ~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~---------- 133 (582)
T 3o4h_A 66 SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDR---------- 133 (582)
T ss_dssp EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSC----------
T ss_pred ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCC----------
Confidence 455555544454 55554 34455554 4 55443 332222 233557777775 455555555
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEcccccccccce
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIARERITRF 172 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~~~~~k~ 172 (823)
+.+||+.+. .+. .+. ..| ..+++|+|||+. +|+++.+ +.|.+|+.. +.+.
T Consensus 134 ~~l~d~~~g----------~~~-~l~----~~~---~~~~~~spDG~~---la~~~~~~~~~~~i~~~d~~-----~g~~ 187 (582)
T 3o4h_A 134 VALYALDGG----------GLR-ELA----RLP---GFGFVSDIRGDL---IAGLGFFGGGRVSLFTSNLS-----SGGL 187 (582)
T ss_dssp EEEEEEETT----------EEE-EEE----EES---SCEEEEEEETTE---EEEEEEEETTEEEEEEEETT-----TCCC
T ss_pred ceEEEccCC----------cEE-Eee----cCC---CceEEECCCCCE---EEEEEEcCCCCeEEEEEcCC-----CCCc
Confidence 559998742 122 222 123 378999999999 9988877 678888742 2334
Q ss_pred eEEecCCCCcceEEEeecCCeEEEEEEc-CC--eEEEEEecCCCCcceEEccCCCccceec--------ccCCCeEEEe-
Q 037368 173 KLQVDNQCSVMGLGFRVDGQALQLFAVT-PN--SVILFSLQNQPPKRQFLDNIGCSTNSVA--------MSDRLELIIG- 240 (823)
Q Consensus 173 ~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~--~V~~~d~~~~~~~~~~l~~~~~~~~~~~--------~s~~~~liv~- 240 (823)
+.+..+.+.+.+++|+|||+ .|+.+. ++ .|++||+.+.. .. .+..+...+..++ |+|||+++++
T Consensus 188 ~~l~~~~~~~~~~~~SpDG~--~l~~~~~~~~~~i~~~d~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 188 RVFDSGEGSFSSASISPGMK--VTAGLETAREARLVTVDPRDGS-VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp EEECCSSCEEEEEEECTTSC--EEEEEECSSCEEEEEECTTTCC-EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred eEeecCCCccccceECCCCC--EEEEccCCCeeEEEEEcCCCCc-EE-EccCCCcChhhhhhccccceeEcCCCcEEEEE
Confidence 45556677899999999995 455443 34 59999987643 33 5555666666677 9999976543
Q ss_pred -eCCeEEEEecCCCCccccccCCeEEEEe-eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 241 -RPEAVYFYEVDGRGPCWAFEGEKKLLGW-FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 241 -~~~~I~i~~~~g~~~~~~~~g~~~~i~~-~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
.++.+++|++ |+.. ....+....+++ .+..++..+.+. ..+.+.+||..+
T Consensus 264 ~~~g~~~l~~~-g~~~-~~~~~~v~~~~~sdg~~l~~~s~~~--~p~~l~~~d~~~ 315 (582)
T 3o4h_A 264 RREGRSAVFID-GERV-EAPQGNHGRVVLWRGKLVTSHTSLS--TPPRIVSLPSGE 315 (582)
T ss_dssp EETTEEEEEET-TEEE-CCCSSEEEEEEEETTEEEEEEEETT--EEEEEEEETTCC
T ss_pred EcCCcEEEEEE-CCee-ccCCCceEEEEecCCEEEEEEcCCC--CCCeEEEEcCCC
Confidence 3568999998 4321 122333334444 344555555432 235688888765
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.85 E-value=5.1e-07 Score=96.71 Aligned_cols=259 Identities=9% Similarity=0.058 Sum_probs=150.8
Q ss_pred eEEEeeCC--CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSSGR--GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~~~--~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
|.+++++. ..++..+.++.++.| .++....+..+...+.+++++|+|+++++.+.++. |.+||....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~---------i~~~d~~~~ 76 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGN---------IFKINPETK 76 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCE---------EEEECTTTC
T ss_pred cceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCE---------EEEEeCCCC
Confidence 44444432 234444678888888 34555567777778899999999998888888886 999998742
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEccccccccccee-EEe--cC
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIARERITRFK-LQV--DN 178 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~~~~~k~~-~~~--~~ 178 (823)
. ...... ... ..+.+++++|+++. ++++..+ +.|.+|+.+ +.+.. .+. ..
T Consensus 77 --------~--~~~~~~--~~~---~~~~~i~~~~dg~l---~v~~~~~~~~~~~i~~~d~~-----~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 77 --------E--IKRPFV--SHK---ANPAAIKIHKDGRL---FVCYLGDFKSTGGIFAATEN-----GDNLQDIIEDLST 133 (333)
T ss_dssp --------C--EEEEEE--CSS---SSEEEEEECTTSCE---EEEECTTSSSCCEEEEECTT-----SCSCEEEECSSSS
T ss_pred --------c--EEEEee--CCC---CCcceEEECCCCcE---EEEeCCCCCCCceEEEEeCC-----CCEEEEEEccCcc
Confidence 1 222211 111 33899999999987 7776655 588888753 12222 222 12
Q ss_pred CCCcceEEEeecCCeEEEEEEcC-------CeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEee--CCeEEEE
Q 037368 179 QCSVMGLGFRVDGQALQLFAVTP-------NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIGR--PEAVYFY 248 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t~-------~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~~--~~~I~i~ 248 (823)
...+.++.++++|+ +.+++.. .+|+.|+..+. .. ..+......++.++|+|+|+ ++++. ++.|++|
T Consensus 134 ~~~~~~i~~d~~g~--l~v~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~ 209 (333)
T 2dg1_A 134 AYCIDDMVFDSKGG--FYFTDFRGYSTNPLGGVYYVSPDFR-TV-TPIIQNISVANGIALSTDEKVLWVTETTANRLHRI 209 (333)
T ss_dssp CCCEEEEEECTTSC--EEEEECCCBTTBCCEEEEEECTTSC-CE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred CCcccceEECCCCC--EEEEeccccccCCCceEEEEeCCCC-EE-EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEE
Confidence 45688999999983 3443332 24555554432 22 22222223456789999986 54543 4689999
Q ss_pred ecCCCCccc---------cccC--CeEEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEEE-Eecccc------ceeE
Q 037368 249 EVDGRGPCW---------AFEG--EKKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLIA-HSLVVK------EVSH 308 (823)
Q Consensus 249 ~~~g~~~~~---------~~~g--~~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~i~------~v~~ 308 (823)
+.+..+... .+.+ .+..+.+. +...++.. .++.|.+||+.++.+. +..... .+..
T Consensus 210 d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~-----~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~ 284 (333)
T 2dg1_A 210 ALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY-----GQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTH 284 (333)
T ss_dssp EECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE-----TTTEEEEECTTSCEEEEEECTTGGGTCSCBCCE
T ss_pred EecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc-----CCCEEEEECCCCCEEEEEEcCCCccccccCcce
Confidence 985322211 1222 23445554 33333332 2478999999776543 222211 2233
Q ss_pred E-EeecC-cEEEEEcCC------eEEEEe
Q 037368 309 M-LCEWG-NIILVMTDK------SVLCIG 329 (823)
Q Consensus 309 v-~~~~~-~~~vvs~~~------~v~~l~ 329 (823)
+ +++++ .+|+.+.++ .|+++.
T Consensus 285 ~~~~~dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 285 PQFIPGTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp EEECTTSCEEEEEEECGGGTCCEEEEEEE
T ss_pred EEECCCCCEEEEEeCccCCCCCceEEEEe
Confidence 3 45555 456555542 678775
No 177
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=98.83 E-value=2e-10 Score=123.56 Aligned_cols=374 Identities=14% Similarity=0.145 Sum_probs=255.6
Q ss_pred HHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcC-hHHHHHHhhchhhHHHHHHHHHH
Q 037368 340 LFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLE-PSYVIQKFLDAQRIYNLTNYLEK 418 (823)
Q Consensus 340 L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~e-ps~vI~kFl~~~~~~~L~~YL~~ 418 (823)
|+.-+.|..|.+-|++.+-+ ..+++--.-.+.+++|.-|--+-...|-.-| -.++|..|-+.+..+.|+.-|+.
T Consensus 180 LV~L~~yq~AVdaArKAns~-----ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEa 254 (624)
T 3lvg_A 180 LVHLGEYQAAVDGARKANST-----RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEA 254 (624)
T ss_dssp SSSCSGGGSSTTTTTTCCSS-----CSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHH
T ss_pred HHHHHHHHHHHHHHHhcCCh-----hHHHHHHHHHhCchHHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 33457788888888876533 2456666678888999888877677655433 34788888888888899998888
Q ss_pred HHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHHHHH
Q 037368 419 LHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLE 498 (823)
Q Consensus 419 l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~il~~ 498 (823)
=.....|..---|.|--+|.|-+ .+++.+.++..- ...++..+++.|.++..+.|+.+|+.++.+++.++...++
T Consensus 255 glglErAHmGmFTELaILYsKY~-PeKlmEHlklf~----sriNipKviracE~ahLW~ElvfLY~~ydE~DnA~ltMi~ 329 (624)
T 3lvg_A 255 ALGLERAHMGMFTELAILYSKFK-PQKMREHLELFW----SRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN 329 (624)
T ss_dssp HTTSTTCCHHHHHHHHHHHHSSC-TTHHHHHHTTSS----SSSCCTTTHHHHTTTTCHHHHHHHHHHHTCHHHHHHTTTS
T ss_pred HhCCCchhHHHHHHHHHHHHhcC-HHHHHHHHHHHH----HhccHHHHHHHHHHHhhHHHHHHHHhcchhHHHHHHHHHh
Confidence 43333344444667778999974 567777777653 2679999999999999999999999999888887766664
Q ss_pred hhcCHHHHH------HHHhcCChHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHHHH
Q 037368 499 DLGRYDEAL------QYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVDFL 572 (823)
Q Consensus 499 ~~~~~~~al------~yl~~l~~~~~~~~i~k~~~~Ll~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (823)
. +.+|. +.+.+.... ++++|==.--|+..|....++|.-+ + .++++.+++
T Consensus 330 h---~~~Aw~h~~Fkdii~KVaN~---EiyYKAi~FYL~e~P~lL~DLL~vL-~-----------------prlDh~RvV 385 (624)
T 3lvg_A 330 H---PTDAWKEGQFKDIITKVANV---ELYYRAIQFYLEFKPLLLNDLLMVL-S-----------------PRLDHTRAV 385 (624)
T ss_dssp C---HHHHCCGGGGTTTGGGCSCS---HHHHHHHHHHTTSCCTTSHHHHHHH-C-----------------TTCCSTTTH
T ss_pred C---ChhhccHHHHHHHHHHcchH---HHHHHHHHHHHHhChHHHHHHHHhc-c-----------------ccCChHHHH
Confidence 3 33332 233344333 3555533335778888888887664 2 257778899
Q ss_pred hhhccC--cHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccccccCCcccccCcccccccccCCCCCCcccCCccccCC
Q 037368 573 NIFVHH--PESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTADG 650 (823)
Q Consensus 573 ~~f~~~--~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 650 (823)
.+|.+. -.....||+.+...+ .+.+-..|-+||++.+ +
T Consensus 386 ~~~~k~~~LpLIkpYL~~Vq~~N-----~~aVNeAln~L~IEEE---D-------------------------------- 425 (624)
T 3lvg_A 386 NYFSKVKQLPLVKPYLRSVQNHN-----NKSVNESLNNLFITEE---D-------------------------------- 425 (624)
T ss_dssp HHHHTTTCGGGGTGGGTSCCCSC-----CHHHHHHHHHHHHHTT---C--------------------------------
T ss_pred HHHHhcCCchhhHHHHHHHHHhh-----HHHHHHHHHHHHhhhh---h--------------------------------
Confidence 999763 334556887665332 3588889999999861 0
Q ss_pred CCCCCCcchHHHHHHHHHHHhhcCCCCCCCCCCChhhHHHHHHhcCC---chhHHHHHHHhccHHHHHHHHHhcCChhHH
Q 037368 651 KDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAF---KEGLLYLYEKLKLYKEVIACYTQAHDHEGL 727 (823)
Q Consensus 651 ~~~~~~~~~~~~~~kll~~L~~~~~~~~~~~~Yd~~~aL~lc~~~~~---~~~~v~L~~k~g~~~~al~~~~~~~d~~~~ 727 (823)
-+.|..-+.. -.+||.-..-.-++.|.+ ..-.++||.|-+.|++++.+.-+.+-.+.|
T Consensus 426 ------------y~~LR~SId~-------ydNFD~i~LA~rLEkHeL~eFRrIAA~LYkkn~rw~qsi~l~KkDklykDA 486 (624)
T 3lvg_A 426 ------------YQALRTSIDA-------YDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDA 486 (624)
T ss_dssp ------------CHHHHHTTSS-------CCCSCTTHHHHHHHTCSSHHHHHHHHHHHHTTCHHHHHSSCSSTTCCTTGG
T ss_pred ------------HHHHHHHHHH-------hccccHHHHHHHHhhCchHHHHHHHHHHHHhcccHHHHHHHHHhcccHHHH
Confidence 1333333333 445553222222333444 466678999999999999988877778889
Q ss_pred HHHHHHhCCCCCCCCcchHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCChHHHHHHhcCCCCcchHHHHHHHHHHHHH
Q 037368 728 IACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQ 807 (823)
Q Consensus 728 i~~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~~~~i~~~L~~i~~~~~l~p~~vl~~l~~~~~~~~~~vk~~l~~~l~~ 807 (823)
|+.|..-+ ++++=..||+||++..+ .+++...|= ...++|.|..|+++-=++.- +..+.+|++..+++
T Consensus 487 ietAa~S~------~~elaeeLL~yFv~~g~--~EcF~a~Ly--tCYdLlrpDvVlElaW~~~l--~D~~mPY~Iq~~re 554 (624)
T 3lvg_A 487 MQYASESK------DTELAEELLQWFLQEEK--RECFGACLF--TCYDLLRPDVVLETAWRHNI--MDFAMPYFIQVMKE 554 (624)
T ss_dssp GTTTTTCC------CTTHHHHHHHHHHHHCS--THHHHHHHH--HTSSSSSCHHHHHHHHHSCS--SSCCCCSSTTTTTT
T ss_pred HHHHHHcC------CHHHHHHHHHHHHHcCc--hHHHHHHHH--HHhhccChHHHHHHHHHhcc--cccccchHHHHHHH
Confidence 99887755 67899999999998754 355555554 34569999999998654444 33456777777777
Q ss_pred HHHHHHHHHHH
Q 037368 808 ESKLIEGDRRA 818 (823)
Q Consensus 808 ~~~~i~~~~~~ 818 (823)
++.+|+++++.
T Consensus 555 ~~~kv~~L~~~ 565 (624)
T 3lvg_A 555 YLTKVDKLDAS 565 (624)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77776666443
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.83 E-value=1.3e-06 Score=93.83 Aligned_cols=239 Identities=10% Similarity=-0.002 Sum_probs=143.0
Q ss_pred eEEEeeCCCEEEE-EecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSSGRGKVVI-GCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~~~~~l~~-gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
...++..++.+++ ...+|.|.+|| .+++.++++. .......|++++++.+.++.+.+++ |.+||+.+.
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~---------v~~iD~~t~ 115 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYR---------IFIINPKTY 115 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSE---------EEEEETTTT
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCe---------EEEEECCCC
Confidence 4555566666654 45579999999 6788888885 3467889999898876676657776 999998742
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eCCeEEEEEcccccccccceeEEecCCCCcce
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DNGCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
...+++.+.........+..+++ .++.. +++.. .+++|.+++.. .+.....+.. .....+
T Consensus 116 ----------~~~~~i~~g~~~~~~~~p~~i~~-~~~~l---yv~~~~~~~~v~viD~~----t~~~~~~i~~-g~~p~~ 176 (328)
T 3dsm_A 116 ----------EITGYIECPDMDMESGSTEQMVQ-YGKYV---YVNCWSYQNRILKIDTE----TDKVVDELTI-GIQPTS 176 (328)
T ss_dssp ----------EEEEEEECTTCCTTTCBCCCEEE-ETTEE---EEEECTTCCEEEEEETT----TTEEEEEEEC-SSCBCC
T ss_pred ----------eEEEEEEcCCccccCCCcceEEE-ECCEE---EEEcCCCCCEEEEEECC----CCeEEEEEEc-CCCccc
Confidence 24555554320000012466777 34444 55544 38899999863 1111122222 234578
Q ss_pred EEEeecCCeEEEEEEcC-----------CeEEEEEecCCCCcceEEc-cCCCccceecccCCCeEEEeeCCeEEEEecCC
Q 037368 185 LGFRVDGQALQLFAVTP-----------NSVILFSLQNQPPKRQFLD-NIGCSTNSVAMSDRLELIIGRPEAVYFYEVDG 252 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~-----------~~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g 252 (823)
+.++++| .+.+++.. +.|.+||..+.. ....+. ..+..+..++++|++..+...+..|++|++.+
T Consensus 177 i~~~~dG--~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t 253 (328)
T 3dsm_A 177 LVMDKYN--KMWTITDGGYEGSPYGYEAPSLYRIDAETFT-VEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEA 253 (328)
T ss_dssp CEECTTS--EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-EEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEETTC
T ss_pred eEEcCCC--CEEEEECCCccCCccccCCceEEEEECCCCe-EEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEECCC
Confidence 9999988 33333332 469999976532 333333 22456788999997765543334899999864
Q ss_pred CCcc-cc-cc---CCeEEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEEE
Q 037368 253 RGPC-WA-FE---GEKKLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLIA 298 (823)
Q Consensus 253 ~~~~-~~-~~---g~~~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i~ 298 (823)
.... .. +. ..+..++.. +.++.+.........++|.+||+.++.+.
T Consensus 254 ~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~ 306 (328)
T 3dsm_A 254 DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLID 306 (328)
T ss_dssp SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEE
T ss_pred CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEE
Confidence 3211 11 12 235666664 44555443111114689999999966553
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.81 E-value=2e-07 Score=110.24 Aligned_cols=242 Identities=10% Similarity=-0.062 Sum_probs=135.3
Q ss_pred CCE-EEEEec-CCeEEEEcCC--C-eeeEeEee-----cccceeEEEEecCCCEEEEEecCCCCcccc-cceeEEEEeCC
Q 037368 35 RGK-VVIGCD-DGAVSLLDRG--L-KFNFGFQA-----HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQ-SAVCLKVFDLD 103 (823)
Q Consensus 35 ~~~-l~~gs~-dG~i~~~d~~--~-~~~~~~~~-----H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~-~~~~vkvWdl~ 103 (823)
++. |++++. ++.|.+|+.. + ...+.+.. |...+..++|+|+|+.|++++.|..+..+. ....|.+||+.
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 456 665543 6778888855 3 33445655 778899999999999999999872100000 00129999997
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC--------eEEEEEcccccccc--ccee
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG--------CIYCIKGDIARERI--TRFK 173 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG--------~V~l~~~~~~~~~~--~k~~ 173 (823)
.... +..+.+ +.+. .... ..+.+++|+|||+. ||.++.++ .|.+|+.+ ..+ .+.+
T Consensus 170 ~~~~--~~~~~~---~~l~-~~~~---~~~~~~~~SpDG~~---la~~~~~~~~~~~~~~~i~~~d~~---~~g~~~~~~ 234 (662)
T 3azo_A 170 GSAA--ADRSAV---RELS-DDAH---RFVTGPRLSPDGRQ---AVWLAWDHPRMPWEGTELKTARVT---EDGRFADTR 234 (662)
T ss_dssp STTT--TCGGGS---EESS-CSCS---SEECCCEECTTSSE---EEEEEECTTCCTTTCEEEEEEEEC---TTSCEEEEE
T ss_pred CCcc--ccCCce---eEEE-ecCC---CcccCceECCCCCE---EEEEECCCCCCCCCCcEEEEEEEC---CCCcccccE
Confidence 4100 000111 1111 0111 23788899999999 99887654 67788753 011 1233
Q ss_pred EEec-CCCCcceEEEeecCCeEEEEEEcCC---eEEEEEecCCCCcceEEccCCCc--------cceecccCCCeEEEee
Q 037368 174 LQVD-NQCSVMGLGFRVDGQALQLFAVTPN---SVILFSLQNQPPKRQFLDNIGCS--------TNSVAMSDRLELIIGR 241 (823)
Q Consensus 174 ~~~~-~~~~It~l~fs~dg~~~~l~~~t~~---~V~~~d~~~~~~~~~~l~~~~~~--------~~~~~~s~~~~liv~~ 241 (823)
.+.. ....+.++.|+|||+ ++++++.+ .|+.|++.+.. ...+...+... +.+++|+|++++++..
T Consensus 235 ~l~~~~~~~~~~~~~spdg~--l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGS--LIVATDRTGWWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp EEEEETTBCEEEEEECTTSC--EEEEECTTSSCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred EeCCCCCceEcceEECCCCe--EEEEECCCCCeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 3433 357899999999994 56666544 46667664332 22222222111 3456777888876532
Q ss_pred -CCeEEEE--ecCCCCccccccCC---eEEE-EeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 242 -PEAVYFY--EVDGRGPCWAFEGE---KKLL-GWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 242 -~~~I~i~--~~~g~~~~~~~~g~---~~~i-~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
.+.+.+| +.++. ....+.++ ...+ ++.++.++.++.... ....|.++|+.++.
T Consensus 312 ~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 312 GKGAAVLGILDPESG-ELVDAAGPWTEWAATLTVSGTRAVGVAASPR-TAYEVVELDTVTGR 371 (662)
T ss_dssp BSSSCEEEEEETTTT-EEEECCSSCCEEEEEEEEETTEEEEEEEETT-EEEEEEEEETTTCC
T ss_pred EcCccEEEEEECCCC-cEEEecCCCCeEEEEEecCCCEEEEEEcCCC-CCCEEEEEECCCCc
Confidence 2556666 54432 22233322 3345 667776666543210 22466677776543
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.80 E-value=1.3e-06 Score=93.87 Aligned_cols=239 Identities=10% Similarity=0.074 Sum_probs=136.4
Q ss_pred cceeEEEEecCCCEEEEEecCCCCc---------------ccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCC
Q 037368 65 SSVLFLQQLKQRNFLVTVGEDEQVS---------------AQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFP 129 (823)
Q Consensus 65 ~~V~~i~~~~~~~~l~s~s~D~~~~---------------~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p 129 (823)
+.|..|+++|+|+++++.+.++... .|...-.|.+||.... .+++.+. ....
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g----------~~~~~~~--~~~~- 90 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA----------EILQSSG--KNLF- 90 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC----------CEEEEEC--TTTC-
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC----------eEEeccC--CCcc-
Confidence 5788888888888888877763100 0000001888987632 2333221 1010
Q ss_pred CCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec---------CCCCcceEEEee-cCCeEEEEEE
Q 037368 130 EAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD---------NQCSVMGLGFRV-DGQALQLFAV 199 (823)
Q Consensus 130 ~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~---------~~~~It~l~fs~-dg~~~~l~~~ 199 (823)
..+..++++|+++. +++.+.++.|..|+.+- .......+-. .-...++|+|++ +| . ++++
T Consensus 91 -~~p~gia~d~~g~l---~v~d~~~~~v~~~~~~g---~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g--~-lyv~ 160 (329)
T 3fvz_A 91 -YLPHGLSIDTDGNY---WVTDVALHQVFKLDPHS---KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG--A-VFVS 160 (329)
T ss_dssp -SSEEEEEECTTSCE---EEEETTTTEEEEECTTC---SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC--C-EEEE
T ss_pred -CCceEEEECCCCCE---EEEECCCCEEEEEeCCC---CeEEEEEecccCCCCCCccccCCCcEEEEeCCCC--e-EEEE
Confidence 23799999999998 99999899999997531 0001222211 112577999998 66 3 4444
Q ss_pred c---CCeEEEEEecCCCCcceEEccCCC----------ccceecccCC-CeEEEee--CCeEEEEecC-CCCccccc---
Q 037368 200 T---PNSVILFSLQNQPPKRQFLDNIGC----------STNSVAMSDR-LELIIGR--PEAVYFYEVD-GRGPCWAF--- 259 (823)
Q Consensus 200 t---~~~V~~~d~~~~~~~~~~l~~~~~----------~~~~~~~s~~-~~liv~~--~~~I~i~~~~-g~~~~~~~--- 259 (823)
. .+.|+.|+.++. ....+...+. .+..++++|+ +.+.++. ++.|++|+.+ |+.. ..+
T Consensus 161 d~~~~~~I~~~~~~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~-~~~~~~ 237 (329)
T 3fvz_A 161 DGYCNSRIVQFSPSGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV-REIKHA 237 (329)
T ss_dssp ECSSCCEEEEECTTSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECCT
T ss_pred eCCCCCeEEEEcCCCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE-EEEecc
Confidence 3 456999995543 3344432221 2567899987 8877653 4589999987 4421 111
Q ss_pred --cCCeEEEEeeCcEEEEEEecC---CCCccEEEEEeCCCCEEEEe-----ccccceeEE-EeecCcEEEEEcC-CeEEE
Q 037368 260 --EGEKKLLGWFRGYLLCVIADQ---RNSKNIFNVYDLKNRLIAHS-----LVVKEVSHM-LCEWGNIILVMTD-KSVLC 327 (823)
Q Consensus 260 --~g~~~~i~~~~~ylv~~s~d~---~~~~~~I~I~D~~~~~i~~~-----~~i~~v~~v-~~~~~~~~vvs~~-~~v~~ 327 (823)
...+..+.+....++...... .....+|.+||+.++.+... ..+..+..+ ++++|.+||.... +.|.+
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 122445555544444432210 12356899999866544332 233334444 5677778877653 44555
Q ss_pred Ee
Q 037368 328 IG 329 (823)
Q Consensus 328 l~ 329 (823)
+.
T Consensus 318 ~~ 319 (329)
T 3fvz_A 318 FT 319 (329)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.80 E-value=1.9e-07 Score=102.25 Aligned_cols=197 Identities=12% Similarity=0.027 Sum_probs=115.2
Q ss_pred EeeC-CCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEE--EecCCCEEEEEecCCCCccc------------c-c
Q 037368 31 CSSG-RGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQ--QLKQRNFLVTVGEDEQVSAQ------------Q-S 93 (823)
Q Consensus 31 ~~~~-~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~--~~~~~~~l~s~s~D~~~~~~------------~-~ 93 (823)
..++ +..|++++.++.|++|| .+++....+..+.+.+.... ++|++..++....++....| . .
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 3344 45899999999999999 66776656666666554443 47899988865422110000 0 0
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCC------eEEEEEccccc
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNG------CIYCIKGDIAR 166 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG------~V~l~~~~~~~ 166 (823)
...|.+||+... . ...+... . ..+..++|+| |++. +|....++ .|.+++.+
T Consensus 167 ~~~l~~~d~~~g--------~---~~~l~~~--~---~~~~~~~~sp~dg~~---l~~~~~~~~~~~~~~l~~~d~~--- 224 (388)
T 3pe7_A 167 CCRLMRVDLKTG--------E---STVILQE--N---QWLGHPIYRPYDDST---VAFCHEGPHDLVDARMWLINED--- 224 (388)
T ss_dssp CEEEEEEETTTC--------C---EEEEEEE--S---SCEEEEEEETTEEEE---EEEEECSCTTTSSCSEEEEETT---
T ss_pred cceEEEEECCCC--------c---eEEeecC--C---ccccccEECCCCCCE---EEEEEecCCCCCcceEEEEeCC---
Confidence 122888998742 2 1222211 1 2289999999 9998 88877543 55555532
Q ss_pred ccccceeEEecCC--CCcceEEEeecCCeEEEEEEcCC-----eEEEEEecCCCCcceEEccCC-----CccceecccCC
Q 037368 167 ERITRFKLQVDNQ--CSVMGLGFRVDGQALQLFAVTPN-----SVILFSLQNQPPKRQFLDNIG-----CSTNSVAMSDR 234 (823)
Q Consensus 167 ~~~~k~~~~~~~~--~~It~l~fs~dg~~~~l~~~t~~-----~V~~~d~~~~~~~~~~l~~~~-----~~~~~~~~s~~ 234 (823)
+...+.+.... ..+..+.|+|||+ .+++++... .|++||+.+.. ...+....+ ..+....|+||
T Consensus 225 --~~~~~~l~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~spd 300 (388)
T 3pe7_A 225 --GTNMRKVKTHAEGESCTHEFWVPDGS-ALVYVSYLKGSPDRFIYSADPETLE-NRQLTSMPACSHLMSNYDGSLMVGD 300 (388)
T ss_dssp --SCCCEESCCCCTTEEEEEEEECTTSS-CEEEEEEETTCCCEEEEEECTTTCC-EEEEEEECCEEEEEECTTSSEEEEE
T ss_pred --CCceEEeeeCCCCcccccceECCCCC-EEEEEecCCCCCcceEEEEecCCCc-eEEEEcCCCceeeeecCCCCeEccC
Confidence 22333343333 3588899999996 355555421 29999987543 212111111 11233468899
Q ss_pred CeEEE-e----------eCCeEEEEecCCC
Q 037368 235 LELII-G----------RPEAVYFYEVDGR 253 (823)
Q Consensus 235 ~~liv-~----------~~~~I~i~~~~g~ 253 (823)
|+.++ + .+..|++|++++.
T Consensus 301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 301 GSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ECCC------------CCCCEEEEEETTTT
T ss_pred CCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 87443 2 2347999998753
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.80 E-value=9.6e-07 Score=94.82 Aligned_cols=216 Identities=12% Similarity=-0.047 Sum_probs=130.0
Q ss_pred CeEEEEcC-CCeeeEeEe-ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEE
Q 037368 45 GAVSLLDR-GLKFNFGFQ-AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILR 122 (823)
Q Consensus 45 G~i~~~d~-~~~~~~~~~-~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~ 122 (823)
|+|.+||. ++++++.+. ++-.....|+++|+|+++++.+.+++ |++||..... ..+.++.
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~---------v~~~~~~g~~---------~~~~~~~ 130 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQ---------VFKLDPHSKE---------GPLLILG 130 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTE---------EEEECTTCSS---------CCSEEES
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCE---------EEEEeCCCCe---------EEEEEec
Confidence 47999995 688876665 34468899999999999998888887 9999986421 1222331
Q ss_pred eccC----CCCCCceEEEEEec-CCCCcceEEEEE-eCCeEEEEEcccccccccceeEEe-cCC---------CCcceEE
Q 037368 123 VFTS----QFPEAKITSFLVLE-EAPPILLIAIGL-DNGCIYCIKGDIARERITRFKLQV-DNQ---------CSVMGLG 186 (823)
Q Consensus 123 ~~~~----~~p~~~v~~va~~~-d~~~~~~ia~G~-~dG~V~l~~~~~~~~~~~k~~~~~-~~~---------~~It~l~ 186 (823)
.... ...-..+..++++| ++.. +++.+ .++.|.+|+.+ +.....+- .+. ....+|+
T Consensus 131 ~~~~~g~~~~~~~~P~~ia~~~~~g~l---yv~d~~~~~~I~~~~~~-----g~~~~~~~~~g~~~~~~~~~~~~p~gia 202 (329)
T 3fvz_A 131 RSMQPGSDQNHFCQPTDVAVEPSTGAV---FVSDGYCNSRIVQFSPS-----GKFVTQWGEESSGSSPRPGQFSVPHSLA 202 (329)
T ss_dssp BTTBCCCSTTCCSSEEEEEECTTTCCE---EEEECSSCCEEEEECTT-----SCEEEEECEECCSSSCCTTEESCEEEEE
T ss_pred ccCCCCCCccccCCCcEEEEeCCCCeE---EEEeCCCCCeEEEEcCC-----CCEEEEeccCCCCCCCCCcccCCCcEEE
Confidence 1000 00002389999999 7777 77775 68999999742 21122221 111 2378999
Q ss_pred EeecCCeEEEEEEc--CCeEEEEEecCCCCcceEE--ccCCCccceecccCCCeEEEee---------CCeEEEEecCCC
Q 037368 187 FRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFL--DNIGCSTNSVAMSDRLELIIGR---------PEAVYFYEVDGR 253 (823)
Q Consensus 187 fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l--~~~~~~~~~~~~s~~~~liv~~---------~~~I~i~~~~g~ 253 (823)
|++++. .++++. .++|++|+..+. .....+ ..++..+..++++| +.+++.. +..|++|+....
T Consensus 203 ~d~~~g--~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 203 LVPHLD--QLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp EETTTT--EEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred EECCCC--EEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 999832 455554 456999998732 234444 23455667788888 4443322 137889986532
Q ss_pred Ccccccc---C---CeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCC
Q 037368 254 GPCWAFE---G---EKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 254 ~~~~~~~---g---~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
.....+. + .+..+++..+ .+.+... ..++|++|++..
T Consensus 279 ~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~----~~~~I~~~~~~~ 322 (329)
T 3fvz_A 279 EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA----HTNTVWKFTLTE 322 (329)
T ss_dssp CEEEEECCSSSCCSSEEEEEECTTSEEEEEES----SSCCEEEEEEEE
T ss_pred eEEEEEcCCCCccCCeeEEEECCCCCEEEEEC----CCCEEEEEeCCc
Confidence 2212221 2 2455555432 4443332 356888888754
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.79 E-value=5.5e-07 Score=96.43 Aligned_cols=194 Identities=12% Similarity=0.148 Sum_probs=119.7
Q ss_pred eEEEee-CCCEE-EEEecCCeEEEEcC-CCeeeEeEeecccceeEEEEecCCCEEEEEecC----CCCcccccceeEEEE
Q 037368 28 ITCCSS-GRGKV-VIGCDDGAVSLLDR-GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGED----EQVSAQQSAVCLKVF 100 (823)
Q Consensus 28 is~~~~-~~~~l-~~gs~dG~i~~~d~-~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D----~~~~~~~~~~~vkvW 100 (823)
+.+++. +++.| ++++.+|.|.+||. +++....+..+...|.+|+++|+|+++++...+ +. |.+|
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~---------i~~~ 117 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG---------IFAA 117 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE---------EEEE
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce---------EEEE
Confidence 344444 44555 56788999999994 455443333567889999999999988887766 44 8999
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe------CCeEEEEEcccccccccceeE
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD------NGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~------dG~V~l~~~~~~~~~~~k~~~ 174 (823)
|..... ....+. . ..+...+..++++|+++. +++... ++.|..++.+ +.+...
T Consensus 118 d~~~~~----------~~~~~~--~-~~~~~~~~~i~~d~~g~l---~v~~~~~~~~~~~~~l~~~~~~-----~~~~~~ 176 (333)
T 2dg1_A 118 TENGDN----------LQDIIE--D-LSTAYCIDDMVFDSKGGF---YFTDFRGYSTNPLGGVYYVSPD-----FRTVTP 176 (333)
T ss_dssp CTTSCS----------CEEEEC--S-SSSCCCEEEEEECTTSCE---EEEECCCBTTBCCEEEEEECTT-----SCCEEE
T ss_pred eCCCCE----------EEEEEc--c-CccCCcccceEECCCCCE---EEEeccccccCCCceEEEEeCC-----CCEEEE
Confidence 987421 111111 0 111134899999999876 665442 2444444421 122223
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcce-----EE-ccCC-CccceecccCCCeEEEee--CC
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQ-----FL-DNIG-CSTNSVAMSDRLELIIGR--PE 243 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~-----~l-~~~~-~~~~~~~~s~~~~liv~~--~~ 243 (823)
+......+.+++|+++|+ .++++. .++|++|++...+.... .. ...+ ..+..++++++|.+.++. ++
T Consensus 177 ~~~~~~~~~~i~~~~dg~--~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 254 (333)
T 2dg1_A 177 IIQNISVANGIALSTDEK--VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG 254 (333)
T ss_dssp EEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT
T ss_pred eecCCCcccceEECCCCC--EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC
Confidence 333334578999999984 455554 46799999854222111 11 1111 345678899999877764 46
Q ss_pred eEEEEecCCC
Q 037368 244 AVYFYEVDGR 253 (823)
Q Consensus 244 ~I~i~~~~g~ 253 (823)
.|.+|+.+++
T Consensus 255 ~v~~~d~~g~ 264 (333)
T 2dg1_A 255 RVLVFNKRGY 264 (333)
T ss_dssp EEEEECTTSC
T ss_pred EEEEECCCCC
Confidence 8999998654
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.74 E-value=3.3e-06 Score=88.83 Aligned_cols=229 Identities=11% Similarity=0.004 Sum_probs=138.5
Q ss_pred eEeEeecccceeEEEEecCCC-EEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEE
Q 037368 57 NFGFQAHSSSVLFLQQLKQRN-FLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITS 135 (823)
Q Consensus 57 ~~~~~~H~~~V~~i~~~~~~~-~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~ 135 (823)
+..+..+.....+++|+|+|+ ++++...++. |..||... . .+.+.. +...+.+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~---------i~~~~~~~----------~--~~~~~~-----~~~~~~~ 73 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNR---------TWAWSDDG----------Q--LSPEMH-----PSHHQNG 73 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTE---------EEEEETTS----------C--EEEEES-----SCSSEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCE---------EEEEECCC----------C--eEEEEC-----CCCCcce
Confidence 345556666788999999998 7788888886 99999873 1 223331 1133899
Q ss_pred EEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec---C--CCCcceEEEeecCCeEEEEE----Ec------
Q 037368 136 FLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD---N--QCSVMGLGFRVDGQALQLFA----VT------ 200 (823)
Q Consensus 136 va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~---~--~~~It~l~fs~dg~~~~l~~----~t------ 200 (823)
++++|++.. +++...++.|.+|+.. .+ +...+.. . ...+.+++++++|+ +.++ ++
T Consensus 74 l~~~~dg~l---~v~~~~~~~i~~~d~~----~g-~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 74 HCLNKQGHL---IACSHGLRRLERQREP----GG-EWESIADSFEGKKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEG 143 (296)
T ss_dssp EEECTTCCE---EEEETTTTEEEEECST----TC-CEEEEECEETTEECCCCCCEEECTTSC--EEEEECSHHHHCGGGS
T ss_pred eeECCCCcE---EEEecCCCeEEEEcCC----CC-cEEEEeeccCCCCCCCCCCEEECCCCC--EEEECCcccccccccc
Confidence 999999988 8877767899999752 11 2222221 1 23577899999983 3332 21
Q ss_pred --------CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee--CCeEEEEecCCCCcc----ccc---cCCe
Q 037368 201 --------PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGRGPC----WAF---EGEK 263 (823)
Q Consensus 201 --------~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~~~~----~~~---~g~~ 263 (823)
.++|+.++.. +.. ..+......++.++|+|+|+++++. ++.|++|++++.+.. ..+ .+.+
T Consensus 144 ~~~~~~~~~~~l~~~~~~--g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD--GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp SCCCCCSSSCEEEEECTT--SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred ccccccCCCcEEEEECCC--CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 1245555543 222 3333344456788999999865543 368999998633321 122 1223
Q ss_pred EEEEee--CcEEEEEEecCCCCccEEEEEeCCCCEEEE-eccccceeEE-E-eecCcEEEEEcCCeEEEEeecC
Q 037368 264 KLLGWF--RGYLLCVIADQRNSKNIFNVYDLKNRLIAH-SLVVKEVSHM-L-CEWGNIILVMTDKSVLCIGEKD 332 (823)
Q Consensus 264 ~~i~~~--~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~-~~~i~~v~~v-~-~~~~~~~vvs~~~~v~~l~~~~ 332 (823)
..++++ +...+ +. + +.|.+||+.++.+.. ..... +..+ | .++++.+++++.+.++++.+++
T Consensus 221 ~~i~~d~~G~l~v-~~-~-----~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 221 DGLRVDAGGLIWA-SA-G-----DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp CSEEEBTTSCEEE-EE-T-----TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred CeEEECCCCCEEE-Ec-C-----CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 344443 44333 32 2 689999998876542 22222 3333 5 3455666666667899997644
No 185
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.72 E-value=7.1e-06 Score=85.73 Aligned_cols=261 Identities=10% Similarity=0.029 Sum_probs=159.4
Q ss_pred CCeEEEee-CCCEEEEEe-cCCeEEEEcCCCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 26 GNITCCSS-GRGKVVIGC-DDGAVSLLDRGLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs-~dG~i~~~d~~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
....+++. +++.+++++ .+|.|.+||.+++.. .+. .+...+..|+++++|++.++...++. |..||
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~---------v~~~d 89 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSGRIK-EFEVPTPDAKVMCLIVSSLGDIWFTENGANK---------IGKLS 89 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTE---------EEEEC
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCCceE-EEECCCCCCcceeEEECCCCCEEEEecCCCe---------EEEEC
Confidence 35566665 456676666 579999999665543 333 23467999999999998888766665 88888
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ec-CC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VD-NQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~-~~ 179 (823)
... . ...+.... +...+.++++++++.. .+++..++.|..++.+ + +...+ .. ..
T Consensus 90 ~~g-~-----------~~~~~~~~---~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----g-~~~~~~~~~~~ 145 (300)
T 2qc5_A 90 KKG-G-----------FTEYPLPQ---PDSGPYGITEGLNGDI---WFTQLNGDRIGKLTAD-----G-TIYEYDLPNKG 145 (300)
T ss_dssp TTS-C-----------EEEEECSS---TTCCEEEEEECSTTCE---EEEETTTTEEEEECTT-----S-CEEEEECSSTT
T ss_pred CCC-C-----------eEEecCCC---CCCCCccceECCCCCE---EEEccCCCeEEEECCC-----C-CEEEccCCCCC
Confidence 762 1 12222211 1133899999999877 7776667888888642 1 22211 22 24
Q ss_pred CCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceE-EccCCCccceecccCCCeEEEee--CCeEEEEecCCCC
Q 037368 180 CSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQF-LDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGRG 254 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~-l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~~ 254 (823)
..+.++.+.++|+ +++++ .++|..|+..+. .... +......+.+++++++|.+.++. ++.|..|+..|..
T Consensus 146 ~~~~~i~~d~~g~---l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~ 220 (300)
T 2qc5_A 146 SYPAFITLGSDNA---LWFTENQNNSIGRITNTGK--LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEI 220 (300)
T ss_dssp CCEEEEEECTTSS---EEEEETTTTEEEEECTTCC--EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCE
T ss_pred CCceeEEECCCCC---EEEEecCCCeEEEECCCCc--EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcE
Confidence 5688999998883 55554 457888987432 2221 22233456778888899877764 3579999986542
Q ss_pred cccccc---CCeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCCCEEEEecc--ccceeEE-EeecCcEEEEEcCCeEEE
Q 037368 255 PCWAFE---GEKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLIAHSLV--VKEVSHM-LCEWGNIILVMTDKSVLC 327 (823)
Q Consensus 255 ~~~~~~---g~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~--i~~v~~v-~~~~~~~~vvs~~~~v~~ 327 (823)
..+... ..+..+....+ .+.++.. ..+.|.+||+.++...+... ...+..+ +...|.+|+.+.. .|++
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~----~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~ 295 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIWFTEW----GANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGK 295 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEET----TTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEE
T ss_pred EEEECCCCCCCceEEEECCCCCEEEecc----CCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEE
Confidence 222222 12455655432 3433332 24789999997665544322 2224444 4456677777664 7877
Q ss_pred Eee
Q 037368 328 IGE 330 (823)
Q Consensus 328 l~~ 330 (823)
+.+
T Consensus 296 ~~p 298 (300)
T 2qc5_A 296 LNL 298 (300)
T ss_dssp EEE
T ss_pred eCC
Confidence 764
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.70 E-value=6.3e-06 Score=89.71 Aligned_cols=256 Identities=12% Similarity=0.061 Sum_probs=144.1
Q ss_pred cCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEec----------CCCCcccccceeEEEEeCCCCCCCCCC
Q 037368 43 DDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGE----------DEQVSAQQSAVCLKVFDLDKMEPEGTS 111 (823)
Q Consensus 43 ~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~----------D~~~~~~~~~~~vkvWdl~~~~~~~~~ 111 (823)
.|+.|.+|| .+++++.++..+..+ .++++|+|++|.++++ |++ |.+||+.+.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~---------v~v~d~~t~------ 91 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDV---------VEVWDADKL------ 91 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEE---------EEEEETTTC------
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCE---------EEEEECcCC------
Confidence 478999999 778888888887766 9999999999988863 454 999998743
Q ss_pred CCCCceEEEEEeccCCC-CCCceEEEEEecCCCCcceEEEEEe--CCeEEEEEcccccccccceeEEecCCCCcceEEEe
Q 037368 112 STSPDCIGILRVFTSQF-PEAKITSFLVLEEAPPILLIAIGLD--NGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFR 188 (823)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-p~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs 188 (823)
..++++.+..... .+..+..++++||++. +.++.. +++|.+|+.. .+.....+.... ...++.+.
T Consensus 92 ----~~~~~i~~~~~~~~~g~~p~~i~~spdg~~---l~v~n~~~~~~v~v~d~~----~~~~~~~~i~~~-~~~~v~~~ 159 (361)
T 2oiz_A 92 ----TFEKEISLPPKRVQGLNYDGLFRQTTDGKF---IVLQNASPATSIGIVDVA----KGDYVEDVTAAA-GCWSVIPQ 159 (361)
T ss_dssp ----CEEEEEEECTTBCCBCCCGGGEEECTTSSE---EEEEEESSSEEEEEEETT----TTEEEEEEGGGT-TEEEEEEC
T ss_pred ----cEEEEEEcCccccccCCCcceEEECCCCCE---EEEECCCCCCeEEEEECC----CCcEEEEEecCC-CcceeEEc
Confidence 2566666431100 0012678999999998 887764 5789999864 111111102111 12335566
Q ss_pred ecCCeEEEEEEcCCeEEEEEecCCCCcc------eEEccCCCccceecccCCCe-EE-EeeCCeEEEEecCCCCcc----
Q 037368 189 VDGQALQLFAVTPNSVILFSLQNQPPKR------QFLDNIGCSTNSVAMSDRLE-LI-IGRPEAVYFYEVDGRGPC---- 256 (823)
Q Consensus 189 ~dg~~~~l~~~t~~~V~~~d~~~~~~~~------~~l~~~~~~~~~~~~s~~~~-li-v~~~~~I~i~~~~g~~~~---- 256 (823)
|++....+..+.++++..|+....+... .+++. +.....+.+++++. ++ ++.++.|++++..+....
T Consensus 160 p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~ 238 (361)
T 2oiz_A 160 PNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV-KDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGP 238 (361)
T ss_dssp TTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT-TTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEE
T ss_pred CCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC-CCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceeccc
Confidence 7653234444455667777775433221 11211 11111233345553 33 344567888887543211
Q ss_pred ccc------------cCC-eEEEEeeCcEEEEEEe-cCC-----CCccEEEEEeCCCCEEEEeccccceeEE-EeecCcE
Q 037368 257 WAF------------EGE-KKLLGWFRGYLLCVIA-DQR-----NSKNIFNVYDLKNRLIAHSLVVKEVSHM-LCEWGNI 316 (823)
Q Consensus 257 ~~~------------~g~-~~~i~~~~~ylv~~s~-d~~-----~~~~~I~I~D~~~~~i~~~~~i~~v~~v-~~~~~~~ 316 (823)
+.+ .|. ...+.+.+.++.++.. ++. ....+|.+||+.+..+..+.....+..+ ++++|+.
T Consensus 239 ~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~~ia~spdg~~ 318 (361)
T 2oiz_A 239 WSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDALSMTIDQQRNL 318 (361)
T ss_dssp EESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCCEEEEETTTTE
T ss_pred ccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCCeeEEEECCCCCE
Confidence 000 111 1233445566665543 211 0235899999988765543332224444 6777776
Q ss_pred EEEEcCCeEEEE
Q 037368 317 ILVMTDKSVLCI 328 (823)
Q Consensus 317 ~vvs~~~~v~~l 328 (823)
++++..+.|..+
T Consensus 319 l~v~n~~~v~v~ 330 (361)
T 2oiz_A 319 MLTLDGGNVNVY 330 (361)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEeCCCeEEEE
Confidence 556555544444
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.68 E-value=1.4e-06 Score=89.86 Aligned_cols=227 Identities=9% Similarity=-0.023 Sum_probs=135.4
Q ss_pred CeEEEee-CCCEEEE-E-ecCCeEEEEcCCCeeeEeEe-ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 27 NITCCSS-GRGKVVI-G-CDDGAVSLLDRGLKFNFGFQ-AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 27 ~is~~~~-~~~~l~~-g-s~dG~i~~~d~~~~~~~~~~-~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
...+++. +++.+++ + +.+|.|..|+..+.....+. .+...+..|+++++|+++++.+ ++. |.+||.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~---------i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNR---------VVTLAA 94 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTE---------EEEECT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCE---------EEEEeC
Confidence 4455554 4556655 5 67899999995443332222 2335788999999999877776 665 999998
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ecCCCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VDNQCS 181 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~~~~~ 181 (823)
.... ...+.... . ..+..++++|++.. +++...+|.|..|+.. ....... ......
T Consensus 95 ~~~~-----------~~~~~~~~-~---~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~ 151 (270)
T 1rwi_B 95 GSNN-----------QTVLPFDG-L---NYPEGLAVDTQGAV---YVADRGNNRVVKLAAG-----SKTQTVLPFTGLND 151 (270)
T ss_dssp TCSC-----------CEECCCCS-C---SSEEEEEECTTCCE---EEEEGGGTEEEEECTT-----CCSCEECCCCSCCS
T ss_pred CCce-----------EeeeecCC-c---CCCcceEECCCCCE---EEEECCCCEEEEEECC-----CceeEeeccccCCC
Confidence 6421 11111111 0 23899999999987 7777778899998532 1111111 122346
Q ss_pred cceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee--CCeEEEEecCCCCccc
Q 037368 182 VMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGRGPCW 257 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~~~~~ 257 (823)
+.+|+++++| . +++++ .++|..|+..+.. ...........+.+++++++|.+.++. ++.|..|+..+.....
T Consensus 152 p~~i~~~~~g--~-l~v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 152 PDGVAVDNSG--N-VYVTDTDNNRVVKLEAESNN-QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp CCCEEECTTC--C-EEEEEGGGTEEEEECTTTCC-EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred ceeEEEeCCC--C-EEEEECCCCEEEEEecCCCc-eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 8899999988 3 55554 3579999976542 111111122446678899998877764 4689999987653221
Q ss_pred -cccC--CeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCC
Q 037368 258 -AFEG--EKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 258 -~~~g--~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...+ .+..+++..+ .+.+... .+++|.++++..
T Consensus 228 ~~~~~~~~p~~i~~~~~g~l~v~~~----~~~~v~~~~~~~ 264 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDRTVYVADR----GNDRVVKLTSLE 264 (270)
T ss_dssp CCCCSCSCEEEEEECTTCCEEEEEG----GGTEEEEECCCG
T ss_pred eccCCCCCceeEEECCCCCEEEEEC----CCCEEEEEcCCC
Confidence 1122 2455555421 2333322 357888888754
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.67 E-value=3.2e-07 Score=100.42 Aligned_cols=229 Identities=10% Similarity=-0.051 Sum_probs=127.9
Q ss_pred CCEEEEEecC---CeEEEEc-CCCeeeEeEeecccce-eEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCC
Q 037368 35 RGKVVIGCDD---GAVSLLD-RGLKFNFGFQAHSSSV-LFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEG 109 (823)
Q Consensus 35 ~~~l~~gs~d---G~i~~~d-~~~~~~~~~~~H~~~V-~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~ 109 (823)
+++|++++.. ..|.+|+ .+++.. .+..+...+ ..+.|+|+|+.|+.++.+++ |.+||+....
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~---------l~~~d~~~~~--- 113 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELN---------LMKVDLETLE--- 113 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTE---------EEEEETTTCC---
T ss_pred CCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECCCCCEEEEEEcCCc---------EEEEECCCCC---
Confidence 3466665433 3788888 455544 444444343 34789999999999999887 9999997431
Q ss_pred CCCCCCceEEEEEeccCCCCCCceEE----------------EEEecCCCCcceEEEE-----EeCCeEEEEEccccccc
Q 037368 110 TSSTSPDCIGILRVFTSQFPEAKITS----------------FLVLEEAPPILLIAIG-----LDNGCIYCIKGDIARER 168 (823)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~p~~~v~~----------------va~~~d~~~~~~ia~G-----~~dG~V~l~~~~~~~~~ 168 (823)
..........-.|+ -.. ++++|+++. ++++ ..++.|.+|+..
T Consensus 114 -------~~~~~~~~~~~~~~--g~~l~~~~~~~~~~~~~~~~~~spdg~~---~~~~~~~~~~~~~~l~~~d~~----- 176 (396)
T 3c5m_A 114 -------EQVIYTVDEEWKGY--GTWVANSDCTKLVGIEILKRDWQPLTSW---EKFAEFYHTNPTCRLIKVDIE----- 176 (396)
T ss_dssp -------EEEEEECCTTEEEE--EEEEECTTSSEEEEEEEEGGGCCCCCSH---HHHHHHHHTCCCEEEEEEETT-----
T ss_pred -------cEEEEecccccCCC--CCEEEeccCCccccccccccccCCCCcc---eeeeeeccCCCcceEEEEECC-----
Confidence 12121111000000 001 356788876 6554 235567777652
Q ss_pred ccceeEEecCCCCcceEEEee-cCCeEEEEEEcC------CeEEEEEecCCCCcceEEccC-CCccceecccCCCe-EEE
Q 037368 169 ITRFKLQVDNQCSVMGLGFRV-DGQALQLFAVTP------NSVILFSLQNQPPKRQFLDNI-GCSTNSVAMSDRLE-LII 239 (823)
Q Consensus 169 ~~k~~~~~~~~~~It~l~fs~-dg~~~~l~~~t~------~~V~~~d~~~~~~~~~~l~~~-~~~~~~~~~s~~~~-liv 239 (823)
+.+...+......+..+.|+| +|+ .+++++.. ..|++|++.+.. ...+.... +..+..+.|+|+|+ ++.
T Consensus 177 ~g~~~~~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 177 TGELEVIHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCcEEeeccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCccccceEECCCCCEEEE
Confidence 223334445566789999999 663 34454432 358888876532 22222211 23456679999997 444
Q ss_pred ee-C-----CeEEEEecCCCCcc-c-cccCCeEEEEe-eCcEEEEEEecC-----------CCCccEEEEEeCCCC
Q 037368 240 GR-P-----EAVYFYEVDGRGPC-W-AFEGEKKLLGW-FRGYLLCVIADQ-----------RNSKNIFNVYDLKNR 295 (823)
Q Consensus 240 ~~-~-----~~I~i~~~~g~~~~-~-~~~g~~~~i~~-~~~ylv~~s~d~-----------~~~~~~I~I~D~~~~ 295 (823)
+. . ..|++|++.+.... . .+++....+++ .+.+++....+. ...+..|.+||+.++
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 32 2 23999998643211 1 22332223344 666666543210 013478999999764
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.65 E-value=9.2e-06 Score=96.91 Aligned_cols=249 Identities=10% Similarity=0.010 Sum_probs=137.8
Q ss_pred eEEEe-eCC-CEEEEEecCC-----eEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCc-------ccc
Q 037368 28 ITCCS-SGR-GKVVIGCDDG-----AVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVS-------AQQ 92 (823)
Q Consensus 28 is~~~-~~~-~~l~~gs~dG-----~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~-------~~~ 92 (823)
+...+ +++ .+|++++.++ +|++|| .+++...... ....+..++|+|||+.|+.++.|+.+. .+.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 43333 344 5777766544 899999 6677654222 223478899999999999998876410 000
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe-----CCeEEEEEccccc-
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD-----NGCIYCIKGDIAR- 166 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~-----dG~V~l~~~~~~~- 166 (823)
....|.+|++.+.. ........ ....+ ..+.+++|+|||+. |++++. +..|.+|+.+-..
T Consensus 206 ~~~~v~~~~l~t~~--------~~~~~v~~--~~~~~-~~~~~~~~SpDg~~---l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQ--------SEDILCAE--FPDEP-KWMGGAELSDDGRY---VLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCCEEEEEETTSCG--------GGCEEEEC--CTTCT-TCEEEEEECTTSCE---EEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CCCEEEEEECCCCc--------ccceEEec--cCCCC-eEEEEEEEcCCCCE---EEEEEEccCCCccEEEEEECccccc
Confidence 11238899997421 11111111 11111 23788999999999 888876 4577888753100
Q ss_pred --ccccceeEEecCCCCcceEEEeecCCeEEEEEEcCC----eEEEEEecCCC--CcceEEccCC-CccceecccCCCeE
Q 037368 167 --ERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPN----SVILFSLQNQP--PKRQFLDNIG-CSTNSVAMSDRLEL 237 (823)
Q Consensus 167 --~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~----~V~~~d~~~~~--~~~~~l~~~~-~~~~~~~~s~~~~l 237 (823)
......+.+..+...+.. .|+++|+ .+++.++.+ .|++|++.+.. ....+..... ..+..++|++++.+
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 349 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL 349 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCC-EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE
Confidence 001124445444445554 4888885 455555433 49999987542 1223333222 25666788877777
Q ss_pred EEe-e-CC--eEEEEec-CCCCccccccCC---eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCC
Q 037368 238 IIG-R-PE--AVYFYEV-DGRGPCWAFEGE---KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 238 iv~-~-~~--~I~i~~~-~g~~~~~~~~g~---~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
+++ . ++ .|++|+. .|+. ...+..+ ...+++ .++.++...... ...++|.+||+.++
T Consensus 350 v~~~~~~g~~~l~~~~~~~g~~-~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 350 VLCYLHDVKNTLQLHDLATGAL-LKIFPLEVGSVVGYSGQKKDTEIFYQFTSF-LSPGIIYHCDLTKE 415 (710)
T ss_dssp EEEEEETTEEEEEEEETTTCCE-EEEECCCSSEEEEEECCTTCSEEEEEEECS-SCCCEEEEEETTSS
T ss_pred EEEEEECCEEEEEEEECCCCCE-EEecCCCCceEEEEecCCCCCEEEEEEeCC-CCCCEEEEEECCCC
Confidence 654 3 33 4677777 4431 1222222 233443 344555443211 13478999999764
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.64 E-value=5.6e-06 Score=87.42 Aligned_cols=228 Identities=11% Similarity=0.059 Sum_probs=133.2
Q ss_pred EEEee-CCCEEEEE--------ecCCeEEEEc-CCCeeeEeEee-----cccceeEEEEecC-CCEEEEEecCCCCcccc
Q 037368 29 TCCSS-GRGKVVIG--------CDDGAVSLLD-RGLKFNFGFQA-----HSSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQ 92 (823)
Q Consensus 29 s~~~~-~~~~l~~g--------s~dG~i~~~d-~~~~~~~~~~~-----H~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~ 92 (823)
.+++. +++.++++ +.+|.|..|| .+++.. .+.. +...+..++++++ |+++++.+.++
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~------ 93 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG------ 93 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTTE------
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECCCC------
Confidence 33443 45556544 7889999999 566653 4443 6678999999999 77666665443
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEE-EeccCCCCCCceEEEEEecCCCCcceEEEEEeC---------------Ce
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGIL-RVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN---------------GC 156 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d---------------G~ 156 (823)
|.+||.. .. . ..+ .......+...+.+++++|+++. .++...+ +.
T Consensus 94 ----l~~~d~~-g~----------~-~~~~~~~~~~~~~~~~~~i~~d~~g~l---~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 94 ----LLVVQTD-GT----------F-EEIAKKDSEGRRMQGCNDCAFDYEGNL---WITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp ----EEEEETT-SC----------E-EECCSBCTTSCBCBCCCEEEECTTSCE---EEEECBCBCTTSCCCBTTSSSCEE
T ss_pred ----EEEEeCC-CC----------E-EEEEeccCCCccccCCcCEEECCCCCE---EEEecCcccccccccccccCCCCe
Confidence 8899986 31 1 111 00000111123789999999976 6665544 45
Q ss_pred EEEEEcccccccccceeEEecCCCCcceEEEe----ecCCeEEEEEEc--CCeEEEEEecCCCC--cceEE---ccCC-C
Q 037368 157 IYCIKGDIARERITRFKLQVDNQCSVMGLGFR----VDGQALQLFAVT--PNSVILFSLQNQPP--KRQFL---DNIG-C 224 (823)
Q Consensus 157 V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs----~dg~~~~l~~~t--~~~V~~~d~~~~~~--~~~~l---~~~~-~ 224 (823)
|..++.+ .+...+........+++|+ ++| ..++++. .++|..|+....+. ....+ ..+. .
T Consensus 155 l~~~~~~------g~~~~~~~~~~~~~~i~~~~~~d~dg--~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 155 IYCFTTD------GQMIQVDTAFQFPNGIAVRHMNDGRP--YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp EEEECTT------SCEEEEEEEESSEEEEEEEECTTSCE--EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred EEEECCC------CCEEEeccCCCCcceEEEecccCCCC--CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 5555431 1222222223346889999 887 4566663 46799999762221 11122 2222 3
Q ss_pred ccceecccCCCeEEEe--eCCeEEEEecC-CCCc-ccccc-CCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 225 STNSVAMSDRLELIIG--RPEAVYFYEVD-GRGP-CWAFE-GEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 225 ~~~~~~~s~~~~liv~--~~~~I~i~~~~-g~~~-~~~~~-g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
.+..++++++|.+.++ .++.|..|+.+ |+.. .+... ..+..+++ .+.+|.+.+. ..+.|..|++..
T Consensus 227 ~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~----~~~~l~~~~~~~ 299 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH----ENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET----TTTEEEEEECSS
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC----CCCeEEEEeCCC
Confidence 4567888999998776 35689999987 4321 11222 22445554 4455655543 246788888753
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.62 E-value=1.8e-05 Score=91.37 Aligned_cols=223 Identities=10% Similarity=0.041 Sum_probs=137.3
Q ss_pred EEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCC
Q 037368 37 KVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSP 115 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~ 115 (823)
.+++...+|+|.++| .+++++.++... ..+.++.++|+|+++.+++.|++ |.+||+... +.
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~---------V~viD~~~~--------t~ 230 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGK---------VNMIDLWMK--------EP 230 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSE---------EEEEETTSS--------SC
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCe---------EEEEECCCC--------CC
Confidence 446777899999999 678888777643 35678999999999999999987 999999511 12
Q ss_pred ceEEEEEeccCCCCCCceEEEEEe----cCCCCcceEEEE-EeCCeEEEEEcccccccccceeEEec-C----------C
Q 037368 116 DCIGILRVFTSQFPEAKITSFLVL----EEAPPILLIAIG-LDNGCIYCIKGDIARERITRFKLQVD-N----------Q 179 (823)
Q Consensus 116 ~~~~~~~~~~~~~p~~~v~~va~~----~d~~~~~~ia~G-~~dG~V~l~~~~~~~~~~~k~~~~~~-~----------~ 179 (823)
..+.+++.. .....++|+ |||+. ++++ ..+++|.++++.- ......+-. + .
T Consensus 231 ~~v~~i~~G------~~P~~ia~s~~~~pDGk~---l~v~n~~~~~v~ViD~~t----~~~~~~i~~~~~~~~~~~~~p~ 297 (567)
T 1qks_A 231 TTVAEIKIG------SEARSIETSKMEGWEDKY---AIAGAYWPPQYVIMDGET----LEPKKIQSTRGMTYDEQEYHPE 297 (567)
T ss_dssp CEEEEEECC------SEEEEEEECCSTTCTTTE---EEEEEEETTEEEEEETTT----CCEEEEEECCEECTTTCCEESC
T ss_pred cEeEEEecC------CCCceeEEccccCCCCCE---EEEEEccCCeEEEEECCC----CcEEEEEeccccccccccccCC
Confidence 356666542 226899999 69987 6555 4569999998641 111112211 0 2
Q ss_pred CCcceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee--CCeEEEEecCCCCc
Q 037368 180 CSVMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR--PEAVYFYEVDGRGP 255 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~--~~~I~i~~~~g~~~ 255 (823)
..+.++.+++++. ..++... .++|.++|..........--..+..+.+..|+|+|+++ ++. ++.|.++|......
T Consensus 298 ~rva~i~~s~~~~-~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 298 PRVAAILASHYRP-EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp CCEEEEEECSSSS-EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred CceEEEEEcCCCC-EEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 2577888888764 3333333 35688898764321111111234455677899999854 432 47899999874322
Q ss_pred cccccC-----Ce-EEEE---eeCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 256 CWAFEG-----EK-KLLG---WFRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 256 ~~~~~g-----~~-~~i~---~~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...++. |+ .... +.+..+.+.+.- .+++|.++|...
T Consensus 377 ~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~---g~~~Vsvid~~~ 421 (567)
T 1qks_A 377 VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM---GDDSVALIGTDP 421 (567)
T ss_dssp EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS---SSSEEEEEECCT
T ss_pred EEEEeccCcCCCCccceeeECCCCCcEEEeCCC---CCCeEEEecCCC
Confidence 111111 11 1222 223444433321 347899999875
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.62 E-value=2.3e-06 Score=89.53 Aligned_cols=182 Identities=9% Similarity=0.056 Sum_probs=123.1
Q ss_pred eCCCEEEEEecCCeEEEEcC-CCeeeEeEeecc-cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 33 SGRGKVVIGCDDGAVSLLDR-GLKFNFGFQAHS-SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 33 ~~~~~l~~gs~dG~i~~~d~-~~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
++++.|++|+.++.|.+||+ +|+.+.+|..|. ..+.++.++|+|+++++ .++. |..||.+ .
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~---------V~~~d~~-G----- 65 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKG---------AKMITRD-G----- 65 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSE---------EEEECTT-S-----
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCC---------EEEECCC-C-----
Confidence 45677899999999999996 999999999887 58999999999999993 3554 9999984 2
Q ss_pred CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe-CCeEEEEEcccccccccceeEE-ecC-----CCCcc
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD-NGCIYCIKGDIARERITRFKLQ-VDN-----QCSVM 183 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~-dG~V~l~~~~~~~~~~~k~~~~-~~~-----~~~It 183 (823)
..+..+.... . ..+.++++.|||+. +++.+. ++.|..++.+ +.....+ ... ..+..
T Consensus 66 -----~~~W~~~~~~-~---~~~~~~~~~~dG~~---lv~~~~~~~~v~~vd~~-----Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 66 -----RELWNIAAPA-G---CEMQTARILPDGNA---LVAWCGHPSTILEVNMK-----GEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp -----CEEEEEECCT-T---CEEEEEEECTTSCE---EEEEESTTEEEEEECTT-----SCEEEEEEECCSCSSGGGSCS
T ss_pred -----CEEEEEcCCC-C---ccccccEECCCCCE---EEEecCCCCEEEEEeCC-----CCEEEEEeccCCCCccccccc
Confidence 2455554321 1 23889999999999 888887 7777777532 1111111 111 12456
Q ss_pred eEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEe-eC-CeEEEEecC-CC
Q 037368 184 GLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIG-RP-EAVYFYEVD-GR 253 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~-~~-~~I~i~~~~-g~ 253 (823)
.+.+.++| .++++.+ ++.|..||..++ ....+... ..+.++...++|.++++ .+ +.|+.++.+ |+
T Consensus 129 ~v~~~~~G--~~lv~~~~~~~v~~~d~~G~--~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 129 QINKNKKG--NYLVPLFATSEVREIAPNGQ--LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CCEECTTS--CEEEEETTTTEEEEECTTSC--EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CceECCCC--CEEEEecCCCEEEEECCCCC--EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 77788888 4565555 457999998743 33444322 33445566788876654 44 478889887 44
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.60 E-value=1.3e-05 Score=95.62 Aligned_cols=202 Identities=11% Similarity=0.018 Sum_probs=118.5
Q ss_pred cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 63 HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 63 H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
|+..+..++|+|+|++||.++.++. .. ...|++||+.+.. .+.. .... ..+.+++|+||+
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G-~~---~~~i~v~d~~tg~----------~~~~-~~~~-----~~~~~~~wspDg 182 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASG-SD---WVTIKFMKVDGAK----------ELPD-VLER-----VKFSCMAWTHDG 182 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETT-CS---CEEEEEEETTTTE----------EEEE-EEEE-----ECSCCEEECTTS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCC-Cc---eEEEEEEECCCCC----------CCcc-cccC-----cccceEEEEeCC
Confidence 4457899999999999987766541 10 1129999998431 2221 1111 116789999999
Q ss_pred CCcceEEEEEeCCe----------------EEEEEcccccccccceeEEecC---CCCcceEEEeecCCeEEEEEEc---
Q 037368 143 PPILLIAIGLDNGC----------------IYCIKGDIARERITRFKLQVDN---QCSVMGLGFRVDGQALQLFAVT--- 200 (823)
Q Consensus 143 ~~~~~ia~G~~dG~----------------V~l~~~~~~~~~~~k~~~~~~~---~~~It~l~fs~dg~~~~l~~~t--- 200 (823)
+. |+.++.++. |.+|+..- .......+++. ...+.++.|+|||+ .+++.+.
T Consensus 183 ~~---l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t---~~~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~ 255 (710)
T 2xdw_A 183 KG---MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGT---DQSEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGC 255 (710)
T ss_dssp SE---EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTS---CGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSS
T ss_pred CE---EEEEEECCccccccccccccCCCCEEEEEECCC---CcccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccC
Confidence 99 999988766 88887531 11112344432 33477999999996 4455443
Q ss_pred --CCeEEEEEecC------CCCcceEEccCCCccceecccCCCe-EEEeeC-----CeEEEEecCCCCc--ccc-ccC-C
Q 037368 201 --PNSVILFSLQN------QPPKRQFLDNIGCSTNSVAMSDRLE-LIIGRP-----EAVYFYEVDGRGP--CWA-FEG-E 262 (823)
Q Consensus 201 --~~~V~~~d~~~------~~~~~~~l~~~~~~~~~~~~s~~~~-liv~~~-----~~I~i~~~~g~~~--~~~-~~g-~ 262 (823)
...|++||+.+ .......+..+...... .|+|+|. +++.++ ..|++|++.+... ... +.. .
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 35699999875 22123444333222322 4667664 554432 2588999875331 111 111 1
Q ss_pred ---eEEEEee-CcEEEEEEecCCCCccEEEEEeCCC
Q 037368 263 ---KKLLGWF-RGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 263 ---~~~i~~~-~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...+.|. +++++....+. ....|.+||+.+
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~--g~~~l~~~~~~~ 368 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHD--VKNTLQLHDLAT 368 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEET--TEEEEEEEETTT
T ss_pred CCeEEEEEEEcCCEEEEEEEEC--CEEEEEEEECCC
Confidence 2346676 67776655421 234688889843
No 194
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.60 E-value=2.3e-05 Score=81.37 Aligned_cols=212 Identities=15% Similarity=0.125 Sum_probs=139.5
Q ss_pred EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCC
Q 037368 134 TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQ 212 (823)
Q Consensus 134 ~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~ 212 (823)
-+.-.+|.... +|.-. ..++.+++.+ .|.++- +.-.++|.- |.|-.. ..|..+|++.|+.|++.+.
T Consensus 70 dsAIMnP~~~V---iALra-g~~LQiFnle------tK~klks~~~~e~Vvf--WkWis~-~~L~lVT~taVyHWs~~~~ 136 (365)
T 2xzh_A 70 DSAIMNPASKV---IALKA-GKTLQIFNIE------MKSKMKAHTMTDDVTF--WKWISL-NTVALVTDNAVYHWSMEGE 136 (365)
T ss_dssp SEEEECSSSSE---EEEEE-TTEEEEEETT------TTEEEEEEECSSCEEE--EEECSS-SEEEEEESSEEEEEESSTT
T ss_pred ceeeeCCCccE---EEEec-CCeEEEechH------HhhhhcceecCCccEE--EEecCC-CeEEEEcCCcEEEEcccCC
Confidence 34445888777 77765 7789999875 233321 223567776 444432 4788899999999999887
Q ss_pred CCcceEEccCCCccceec----ccCCCe-EE-Eee---C----CeEEEEecCCCCccccccCCeEE--------------
Q 037368 213 PPKRQFLDNIGCSTNSVA----MSDRLE-LI-IGR---P----EAVYFYEVDGRGPCWAFEGEKKL-------------- 265 (823)
Q Consensus 213 ~~~~~~l~~~~~~~~~~~----~s~~~~-li-v~~---~----~~I~i~~~~g~~~~~~~~g~~~~-------------- 265 (823)
..|.++++.|+..-+|-. .+++.+ ++ +|- + +.+.+|+.+ ++.+..+|||...
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~ 215 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEEST 215 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEE
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCce
Confidence 778899987765444422 235555 33 231 2 568899987 4444444554211
Q ss_pred ---EEee-----CcEEEEEEec--CC------------------------------------CCccEEEEEeCCCCEEEE
Q 037368 266 ---LGWF-----RGYLLCVIAD--QR------------------------------------NSKNIFNVYDLKNRLIAH 299 (823)
Q Consensus 266 ---i~~~-----~~ylv~~s~d--~~------------------------------------~~~~~I~I~D~~~~~i~~ 299 (823)
++.- +=+++-+..+ +. +..|.|.+||++++...|
T Consensus 216 lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~ 295 (365)
T 2xzh_A 216 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 295 (365)
T ss_dssp EEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEE
Confidence 1111 1133333222 10 156899999999999999
Q ss_pred eccccc-eeEE---EeecCcEEEEEcCCeEEEEeecChHHHHHHHHH-hccHHHHHHHHHhcCCCH
Q 037368 300 SLVVKE-VSHM---LCEWGNIILVMTDKSVLCIGEKDMESKLDMLFK-KNLYTVAINLVQSQQADA 360 (823)
Q Consensus 300 ~~~i~~-v~~v---~~~~~~~~vvs~~~~v~~l~~~~~~~~i~~L~~-~~~f~~Al~la~~~~~~~ 360 (823)
..++.. ..++ ....++++.+.+.|+|+.+. .+.+..+..+.. .++-++|+++|.+.++|.
T Consensus 296 ~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~-v~~~~ivpyi~~~l~n~~LA~~lA~R~~LpG 360 (365)
T 2xzh_A 296 MNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC-VEEENIIPYITNVLQNPDLALRMAVRNNNAG 360 (365)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEE-ECTTTHHHHHHHTTCCHHHHHHHHHHTCC--
T ss_pred EeccCCCceEEecccCCCCcEEEEcCCCEEEEEE-ECcccEehhhhhcCCCHHHHHHHHHhcCCCC
Confidence 888876 3343 34567899999999998876 677778888886 478999999999999986
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.58 E-value=2.3e-06 Score=91.84 Aligned_cols=191 Identities=12% Similarity=0.051 Sum_probs=123.9
Q ss_pred CeEEEee-CCCEEEEEe-cCCeEEEEc-CCCeeeEeEeecc-----cceeEEEEecCCCEEEEEe-cCCCCcccccceeE
Q 037368 27 NITCCSS-GRGKVVIGC-DDGAVSLLD-RGLKFNFGFQAHS-----SSVLFLQQLKQRNFLVTVG-EDEQVSAQQSAVCL 97 (823)
Q Consensus 27 ~is~~~~-~~~~l~~gs-~dG~i~~~d-~~~~~~~~~~~H~-----~~V~~i~~~~~~~~l~s~s-~D~~~~~~~~~~~v 97 (823)
....++. +++.+++++ .++.|.+|| .+++..+++.... .....|++ .++.++++.. .+++ |
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~---------v 154 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNR---------I 154 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCE---------E
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCE---------E
Confidence 4445555 567887777 899999999 6778776776433 15567777 4555555543 3666 9
Q ss_pred EEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----------CeEEEEEcccccc
Q 037368 98 KVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----------GCIYCIKGDIARE 167 (823)
Q Consensus 98 kvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----------G~V~l~~~~~~~~ 167 (823)
.+||+.+. ..+.++... .. +..++++|+++. +++...+ +.|.+++..
T Consensus 155 ~viD~~t~----------~~~~~i~~g--~~----p~~i~~~~dG~l---~v~~~~~~~~~~~~~~~~~v~~id~~---- 211 (328)
T 3dsm_A 155 LKIDTETD----------KVVDELTIG--IQ----PTSLVMDKYNKM---WTITDGGYEGSPYGYEAPSLYRIDAE---- 211 (328)
T ss_dssp EEEETTTT----------EEEEEEECS--SC----BCCCEECTTSEE---EEEBCCBCTTCSSCBCCCEEEEEETT----
T ss_pred EEEECCCC----------eEEEEEEcC--CC----ccceEEcCCCCE---EEEECCCccCCccccCCceEEEEECC----
Confidence 99999742 245555532 12 578899999987 7766655 789888753
Q ss_pred cccceeEEe-cCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcc-eEEccCCCccceecccC-CCeEEEee---
Q 037368 168 RITRFKLQV-DNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKR-QFLDNIGCSTNSVAMSD-RLELIIGR--- 241 (823)
Q Consensus 168 ~~~k~~~~~-~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~-~~l~~~~~~~~~~~~s~-~~~liv~~--- 241 (823)
.+.....+. .......+++|++++ ..+++++. .|++||..+..... ..+...+..+..++++| ++.+.++.
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~--~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~ 288 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTR--DTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID 288 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTS--CEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT
T ss_pred CCeEEEEEecCCCCCceeEEEecCC--CEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc
Confidence 111111222 112368899999988 46887776 89999986533111 11222245677889998 67776664
Q ss_pred ---CCeEEEEecCCC
Q 037368 242 ---PEAVYFYEVDGR 253 (823)
Q Consensus 242 ---~~~I~i~~~~g~ 253 (823)
++.|.+|+++|+
T Consensus 289 y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 289 YQQQGIVYRYSPQGK 303 (328)
T ss_dssp SSSEEEEEEECTTCC
T ss_pred cccCCEEEEECCCCC
Confidence 358999998854
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.57 E-value=5.1e-06 Score=87.97 Aligned_cols=184 Identities=13% Similarity=0.041 Sum_probs=116.5
Q ss_pred EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCc
Q 037368 37 KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPD 116 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~ 116 (823)
.++++..+|.|..|+.+++ ...|..+...+..+.++++|+++++...++. |.+|+.+. .
T Consensus 59 l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~---------v~~~~~~g---------~-- 117 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRA---------ITRSDADG---------Q-- 117 (305)
T ss_dssp EEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTE---------EEEECTTS---------C--
T ss_pred EEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCE---------EEEECCCC---------C--
Confidence 4678888999999997666 3477777888999999999997766544454 88898752 1
Q ss_pred eEEEEEeccCCCCCCceEEEEEecCCCCcceEEE----EEe-------------CCeEEEEEcccccccccceeEEecCC
Q 037368 117 CIGILRVFTSQFPEAKITSFLVLEEAPPILLIAI----GLD-------------NGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 117 ~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~----G~~-------------dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
...+.......+...+..++++|+|+. .++ |+. .+.|..++.. ..+...+. .-
T Consensus 118 -~~~~~~~~~~~~~~~~~~i~~d~dG~l---~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-----~g~~~~~~-~~ 187 (305)
T 3dr2_A 118 -AHLLVGRYAGKRLNSPNDLIVARDGAI---WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-----GSPLQRMA-DL 187 (305)
T ss_dssp -EEEEECEETTEECSCCCCEEECTTSCE---EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-----SCCCEEEE-EE
T ss_pred -EEEEEeccCCCccCCCCCEEECCCCCE---EEeCcCCCccccccccccccccCCCeEEEEcCC-----CCcEEEEe-cC
Confidence 111111000111122678999999987 665 432 2445555431 12222222 33
Q ss_pred CCcceEEEeecCCeEEEEEEcC-------CeEEEEEecCCCC-cceEE-ccCCCccceecccCCCeEEEeeCCeEEEEec
Q 037368 180 CSVMGLGFRVDGQALQLFAVTP-------NSVILFSLQNQPP-KRQFL-DNIGCSTNSVAMSDRLELIIGRPEAVYFYEV 250 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~-------~~V~~~d~~~~~~-~~~~l-~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~ 250 (823)
....+++|++||+ .|+++.. +.|+.|++.+... ....+ ......+..++++++|.+.++..++|.+|+.
T Consensus 188 ~~p~gl~~spdg~--~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~ 265 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ--TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDS 265 (305)
T ss_dssp SSEEEEEECTTSS--EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECT
T ss_pred CCCcceEEcCCCC--EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECC
Confidence 3467899999984 5666643 4699999875430 11222 1122335567888999988887788999998
Q ss_pred CCC
Q 037368 251 DGR 253 (823)
Q Consensus 251 ~g~ 253 (823)
+|+
T Consensus 266 ~g~ 268 (305)
T 3dr2_A 266 DGQ 268 (305)
T ss_dssp TSC
T ss_pred CCC
Confidence 765
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.57 E-value=2.3e-05 Score=84.02 Aligned_cols=215 Identities=10% Similarity=0.036 Sum_probs=118.1
Q ss_pred CeEEEeeCCCEEEEE---------ecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 27 NITCCSSGRGKVVIG---------CDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 27 ~is~~~~~~~~l~~g---------s~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
.++.....++++++. +.++.|.+|+ .+++. +.+ ..+..+.|+|+|+.|+.++.++..... .
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~----~ 86 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNAR-RFI----ENATMPRISPDGKKIAFMRANEEKKVS----E 86 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEE----E
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcc----e
Confidence 444444444566543 2367899999 44443 344 578999999999999988875310001 1
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----------------------
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN---------------------- 154 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d---------------------- 154 (823)
|.+|++... . ..+... .+ . +.+++|+||++. ||+++.+
T Consensus 87 l~~~~~~~g--------~--~~~l~~-----~~-~-~~~~~wspdg~~---l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 87 IWVADLETL--------S--SKKILE-----AK-N-IRSLEWNEDSRK---LLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEETTTT--------E--EEEEEE-----ES-E-EEEEEECTTSSE---EEEEEECCCC---------CCCC------
T ss_pred EEEEECCCC--------c--eEEEEc-----CC-C-ccceeECCCCCE---EEEEEccCCCcCCcEEEcccceeecCccc
Confidence 777787632 1 222221 12 2 889999999998 8888743
Q ss_pred -----CeEEEEEcccccccccce-eEEecCCCCcceEEEeecCCeEEEEEEcCC--------eEEEEEecCCCCcceEEc
Q 037368 155 -----GCIYCIKGDIARERITRF-KLQVDNQCSVMGLGFRVDGQALQLFAVTPN--------SVILFSLQNQPPKRQFLD 220 (823)
Q Consensus 155 -----G~V~l~~~~~~~~~~~k~-~~~~~~~~~It~l~fs~dg~~~~l~~~t~~--------~V~~~d~~~~~~~~~~l~ 220 (823)
+.|.+|+.. +.+. +.+.. . .+.++.|+||| ++++++.+ ...+|.++ .+....+..
T Consensus 147 ~~~~~~~l~~~d~~-----~~~~~~~l~~-~-~~~~~~~spdg---~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~ 215 (347)
T 2gop_A 147 FDGEKTTFWIFDTE-----SEEVIEEFEK-P-RFSSGIWHRDK---IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFE 215 (347)
T ss_dssp ---CEEEEEEEETT-----TTEEEEEEEE-E-TTCEEEEETTE---EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEE
T ss_pred ccCccceEEEEECC-----CCeEEeeecC-C-CcccccCCCCe---EEEEEecccccccccccccEEEeC-CCceEEecc
Confidence 356666542 2222 33333 3 78999999987 55555321 23344433 222322222
Q ss_pred cCCCccceecccCCCeE-EEee-C--------CeEEEEecCCCCccccccC---CeEE-EEeeCcEEEEEEecCCCCccE
Q 037368 221 NIGCSTNSVAMSDRLEL-IIGR-P--------EAVYFYEVDGRGPCWAFEG---EKKL-LGWFRGYLLCVIADQRNSKNI 286 (823)
Q Consensus 221 ~~~~~~~~~~~s~~~~l-iv~~-~--------~~I~i~~~~g~~~~~~~~g---~~~~-i~~~~~ylv~~s~d~~~~~~~ 286 (823)
+ ....+ ++|+|+. +.+. + ..|++|+ .|+.. ....+ .... +.|. +-++..+. .++.
T Consensus 216 -~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~-~l~~~~~~~~~~~~~~s-dg~~~~~~----~~~~ 284 (347)
T 2gop_A 216 -K-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVM-GILDEVDRGVGQAKIKD-GKVYFTLF----EEGS 284 (347)
T ss_dssp -E-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEE-ESSTTCCSEEEEEEEET-TEEEEEEE----ETTE
T ss_pred -C-cceee--ECCCCCEEEEEEccccCCccccceEEEEC-CCceE-eccccCCcccCCccEEc-CcEEEEEe----cCCc
Confidence 2 22233 3888874 3333 2 2578887 43321 11222 2332 5565 33333332 3467
Q ss_pred EEEEeCC
Q 037368 287 FNVYDLK 293 (823)
Q Consensus 287 I~I~D~~ 293 (823)
++|| +.
T Consensus 285 ~~l~-~~ 290 (347)
T 2gop_A 285 VNLY-IW 290 (347)
T ss_dssp EEEE-EE
T ss_pred EEEE-Ec
Confidence 8888 65
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.56 E-value=1.5e-05 Score=83.05 Aligned_cols=188 Identities=9% Similarity=0.069 Sum_probs=121.9
Q ss_pred CCeEEEee-CCCEEEEEec-CCeEEEEcCCCeeeEeEe--ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 26 GNITCCSS-GRGKVVIGCD-DGAVSLLDRGLKFNFGFQ--AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs~-dG~i~~~d~~~~~~~~~~--~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
..+.+++. +++.+++++. +|.|..|+.+++. ..+. .+...+..|+++++|.+.++.+.++. |.+||
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~---------i~~~d 126 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNR---------IGRIT 126 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTE---------EEEEC
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCce---------EEEEC
Confidence 34666665 4566766654 7899999966654 2443 24467899999999998888776665 88998
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-e-cCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-V-DNQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~-~~~ 179 (823)
... . ...+.... +...+.++++++++.. .++...++.|..|+.+ + +...+ . ...
T Consensus 127 ~~g---------~---~~~~~~~~---~~~~~~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----g-~~~~~~~~~~~ 182 (299)
T 2z2n_A 127 DDG---------K---IREYELPN---KGSYPSFITLGSDNAL---WFTENQNNAIGRITES-----G-DITEFKIPTPA 182 (299)
T ss_dssp TTC---------C---EEEEECSS---TTCCEEEEEECTTSCE---EEEETTTTEEEEECTT-----C-CEEEEECSSTT
T ss_pred CCC---------C---EEEecCCC---CCCCCceEEEcCCCCE---EEEeCCCCEEEEEcCC-----C-cEEEeeCCCCC
Confidence 742 1 11222111 1123899999999977 7766667888888641 1 12222 1 223
Q ss_pred CCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceE-EccCCCccceecccCCCeEEEee--CCeEEEEecCC
Q 037368 180 CSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQF-LDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDG 252 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~-l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g 252 (823)
..+.++.+.++|+ +++++ .++|..|+..+. .... +......+.+++++++|.+.++. ++.|..|+.++
T Consensus 183 ~~~~~i~~~~~g~---l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g 255 (299)
T 2z2n_A 183 SGPVGITKGNDDA---LWFVEIIGNKIGRITTSGE--ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNN 255 (299)
T ss_dssp CCEEEEEECTTSS---EEEEETTTTEEEEECTTCC--EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTT
T ss_pred CcceeEEECCCCC---EEEEccCCceEEEECCCCc--EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCC
Confidence 4578999998873 55554 467999988322 2221 22233456788899999877764 46899999864
No 199
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.56 E-value=5.6e-07 Score=98.46 Aligned_cols=182 Identities=8% Similarity=0.002 Sum_probs=105.1
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeE-------------------EEEecCCCEEEEEe-----cCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLF-------------------LQQLKQRNFLVTVG-----EDEQV 88 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~-------------------i~~~~~~~~l~s~s-----~D~~~ 88 (823)
.++.|++++.++.|++|+ .+++....+..+.+.... +.++|+++.++.+. .+..
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~- 169 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR- 169 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE-
T ss_pred CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce-
Confidence 346888999999999999 556655445545432211 23455555544332 2222
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCC------eEEEEE
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNG------CIYCIK 161 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG------~V~l~~ 161 (823)
|.+||+... . +..... . ... +..++|+| |++. ++..+.++ .|.+|+
T Consensus 170 --------l~~~d~~~g--------~--~~~~~~-~--~~~---~~~~~~sp~dg~~---l~~~~~~~~~~~~~~l~~~d 222 (396)
T 3c5m_A 170 --------LIKVDIETG--------E--LEVIHQ-D--TAW---LGHPIYRPFDDST---VGFCHEGPHDLVDARMWLVN 222 (396)
T ss_dssp --------EEEEETTTC--------C--EEEEEE-E--SSC---EEEEEEETTEEEE---EEEEECSCSSSCSCCCEEEE
T ss_pred --------EEEEECCCC--------c--EEeecc-C--Ccc---cccceECCCCCCE---EEEEecCCCCCCCceEEEEE
Confidence 888998742 2 222221 1 223 89999999 8887 77766443 455665
Q ss_pred cccccccccceeEEecC--CCCcceEEEeecCCeEEEEEEcC-----CeEEEEEecCCCCcceEEccCCCccceecccC-
Q 037368 162 GDIARERITRFKLQVDN--QCSVMGLGFRVDGQALQLFAVTP-----NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD- 233 (823)
Q Consensus 162 ~~~~~~~~~k~~~~~~~--~~~It~l~fs~dg~~~~l~~~t~-----~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~- 233 (823)
.+ +.+.+.+... ...+..+.|+|+|+ .+++++.. ..|++||+.+.. ...+....+ .. ..|+|
T Consensus 223 ~~-----~~~~~~l~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~--~~-~~~s~~ 292 (396)
T 3c5m_A 223 ED-----GSNVRKIKEHAEGESCTHEFWIPDGS-AMAYVSYFKGQTDRVIYKANPETLE-NEEVMVMPP--CS-HLMSNF 292 (396)
T ss_dssp TT-----SCCCEESSCCCTTEEEEEEEECTTSS-CEEEEEEETTTCCEEEEEECTTTCC-EEEEEECCS--EE-EEEECS
T ss_pred CC-----CCceeEeeccCCCccccceEECCCCC-EEEEEecCCCCccceEEEEECCCCC-eEEeeeCCC--CC-CCccCC
Confidence 32 2222333332 22577899999995 35555443 239999986542 222222122 12 67888
Q ss_pred CCeEEEe-e-----------------CCeEEEEecCCC
Q 037368 234 RLELIIG-R-----------------PEAVYFYEVDGR 253 (823)
Q Consensus 234 ~~~liv~-~-----------------~~~I~i~~~~g~ 253 (823)
+|++++. + +..|++|++.+.
T Consensus 293 dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 293 DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp SSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred CCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 9986653 1 247999998643
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.56 E-value=1.4e-06 Score=89.87 Aligned_cols=188 Identities=12% Similarity=0.050 Sum_probs=121.7
Q ss_pred CeEEEee-CCCEEEEEecCCeEEEEcCCCeeeEeEeecc-cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 27 NITCCSS-GRGKVVIGCDDGAVSLLDRGLKFNFGFQAHS-SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 27 ~is~~~~-~~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
.+.+++. +++.+++++.++.|.+||.++.....+.... ..+..|+++++|++.++.+.++. |.+|+..+
T Consensus 68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~---------i~~~~~~~ 138 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR---------VVKLAAGS 138 (270)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTE---------EEEECTTC
T ss_pred CcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCE---------EEEEECCC
Confidence 3444554 3556777666899999997665544454333 57899999999998888777776 88887543
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ecCCCCcc
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VDNQCSVM 183 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~~~~~It 183 (823)
.. .. ....... ..+.+++++|+++. +++...++.|..|+.+ +...... ...-..+.
T Consensus 139 ~~----------~~--~~~~~~~---~~p~~i~~~~~g~l---~v~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~p~ 195 (270)
T 1rwi_B 139 KT----------QT--VLPFTGL---NDPDGVAVDNSGNV---YVTDTDNNRVVKLEAE-----SNNQVVLPFTDITAPW 195 (270)
T ss_dssp CS----------CE--ECCCCSC---CSCCCEEECTTCCE---EEEEGGGTEEEEECTT-----TCCEEECCCSSCCSEE
T ss_pred ce----------eE--eeccccC---CCceeEEEeCCCCE---EEEECCCCEEEEEecC-----CCceEeecccCCCCce
Confidence 11 11 1111100 12688999999987 8877778899999753 1111111 12225688
Q ss_pred eEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEc-cCCCccceecccCCCeEEEee--CCeEEEEecC
Q 037368 184 GLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLD-NIGCSTNSVAMSDRLELIIGR--PEAVYFYEVD 251 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~ 251 (823)
+|+++++| .+++++ .++|..|+..+.. ..... .....+.+++++++|++.++. ++.|.+++..
T Consensus 196 ~i~~d~~g---~l~v~~~~~~~v~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 196 GIAVDEAG---TVYVTEHNTNQVVKLLAGSTT--STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEEECTTC---CEEEEETTTSCEEEECTTCSC--CEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred EEEECCCC---CEEEEECCCCcEEEEcCCCCc--ceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 99999987 255554 4579999986542 12222 222456788999999876653 4689999875
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.51 E-value=2.2e-06 Score=93.46 Aligned_cols=194 Identities=9% Similarity=0.093 Sum_probs=121.7
Q ss_pred ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCC---CCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 66 SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE---GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 66 ~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
+++.+++++.+.+++++|.|+ ++||++...... ......|. ..+. .| . |+.++| |+
T Consensus 39 ~~nlLais~~~gll~a~~~~~----------l~v~~~~~l~~~~~~~~~~~~~~--~~~~-----lp-~-V~~l~f--d~ 97 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK----------AVVGELQLLRDHITSDSTPLTFK--WEKE-----IP-D-VIFVCF--HG 97 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE----------EEEEEHHHHHHHHHSSSCCCCCS--EEEE-----CT-T-EEEEEE--ET
T ss_pred cccEEEEcCCCCEEEEeCCCE----------EEEEEhhHhhhhhccccccccce--EEee-----CC-C-eeEEEE--CC
Confidence 699999999999999999987 888998643200 00001221 1222 33 3 999999 88
Q ss_pred CCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccC
Q 037368 143 PPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNI 222 (823)
Q Consensus 143 ~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~ 222 (823)
+. +++| .+|.|++|+..- .. ........+.+|.++.+.+. .++.+++++.+.+|++.... ... +
T Consensus 98 ~~---L~v~-~~~~l~v~dv~s---l~-~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~-~~~----~ 161 (388)
T 1xip_A 98 DQ---VLVS-TRNALYSLDLEE---LS-EFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS-TKQ----L 161 (388)
T ss_dssp TE---EEEE-ESSEEEEEESSS---TT-CEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC-EEE----E
T ss_pred CE---EEEE-cCCcEEEEEchh---hh-ccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCc-ccc----c
Confidence 88 9999 799999998631 11 11223334567888877643 35555677789999997543 222 3
Q ss_pred CCccceecccCCCeEEEeeCCeEEEEecCCCCc--cccc------c------CCeEEEEeeCc--EEEEEEecCC--CC-
Q 037368 223 GCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGP--CWAF------E------GEKKLLGWFRG--YLLCVIADQR--NS- 283 (823)
Q Consensus 223 ~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~--~~~~------~------g~~~~i~~~~~--ylv~~s~d~~--~~- 283 (823)
...+.|++|||+|..+.+.++.+++|++++... -..+ + .+...+.|..+ ++++...... ..
T Consensus 162 ~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~ 241 (388)
T 1xip_A 162 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDE 241 (388)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSS
T ss_pred cCCceEEEEcCCceEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcc
Confidence 346889999999955555677999998875431 1112 2 23567888765 4444433211 11
Q ss_pred ---ccEEEEEeCCCCE
Q 037368 284 ---KNIFNVYDLKNRL 296 (823)
Q Consensus 284 ---~~~I~I~D~~~~~ 296 (823)
+..+.|...+.+.
T Consensus 242 ~~~~~~~~ii~~~~~~ 257 (388)
T 1xip_A 242 VSYDQKMYIIKHIDGS 257 (388)
T ss_dssp CCCCEEEEEEEEETTE
T ss_pred cCCcceEEEEEcCCCC
Confidence 3367777644433
No 202
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.51 E-value=1.2e-05 Score=87.51 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=132.5
Q ss_pred EeeCC-CEEEEEe----------cCCeEEEEc-CCCeeeEeEeec------ccceeEEEEecCCCEEEEEec--CCCCcc
Q 037368 31 CSSGR-GKVVIGC----------DDGAVSLLD-RGLKFNFGFQAH------SSSVLFLQQLKQRNFLVTVGE--DEQVSA 90 (823)
Q Consensus 31 ~~~~~-~~l~~gs----------~dG~i~~~d-~~~~~~~~~~~H------~~~V~~i~~~~~~~~l~s~s~--D~~~~~ 90 (823)
..+++ +++++++ .+++|.+|| .+++.+.++..+ ......|+++|+|++|+++.. +++
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~--- 132 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS--- 132 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE---
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe---
Confidence 33444 4777765 367899999 677888777643 345778999999999988865 455
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEE-EEeccCCCCCCceEEEEEecCC-CCcceEEEEEeCCeEEEEEccccccc
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGI-LRVFTSQFPEAKITSFLVLEEA-PPILLIAIGLDNGCIYCIKGDIARER 168 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~v~~va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~ 168 (823)
|.+||+... ..+.+ +.. + ....+.+.|++ .. +++.+.||++.+|..+-
T Consensus 133 ------v~v~d~~~~----------~~~~~~i~~-----~--~~~~v~~~p~~~~~---~~~~~~dg~~~~v~~~~---- 182 (361)
T 2oiz_A 133 ------IGIVDVAKG----------DYVEDVTAA-----A--GCWSVIPQPNRPRS---FMTICGDGGLLTINLGE---- 182 (361)
T ss_dssp ------EEEEETTTT----------EEEEEEGGG-----T--TEEEEEECTTSSSE---EEEEETTSSEEEEEECT----
T ss_pred ------EEEEECCCC----------cEEEEEecC-----C--CcceeEEcCCCCee---EEEECCCCcEEEEEECC----
Confidence 999999842 23444 321 1 14446777876 34 66777789888876421
Q ss_pred cccee-E-----Eec-CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCC-cceEEcc-------CC---Cccceec
Q 037368 169 ITRFK-L-----QVD-NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPP-KRQFLDN-------IG---CSTNSVA 230 (823)
Q Consensus 169 ~~k~~-~-----~~~-~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~-~~~~l~~-------~~---~~~~~~~ 230 (823)
..+.. . .+. ...|+ .+.+++++. ..++++.++.|.++|+.+... ....++- .+ ....-++
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKD-KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSS-EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCC-EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 11111 0 111 22333 444567764 345555556799999865321 1111110 01 1111257
Q ss_pred ccCCCe-EEEee------------CCeEEEEecCCCCcccc--ccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 231 MSDRLE-LIIGR------------PEAVYFYEVDGRGPCWA--FEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 231 ~s~~~~-liv~~------------~~~I~i~~~~g~~~~~~--~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
++|++. +.++. ++.|.+||......... ..+ +..+++ .+.+|.+.. . ++|.|||..
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-----~-~~v~v~D~~ 333 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-----G-GNVNVYDIS 333 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-----S-SCEEEEECS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-----C-CeEEEEECC
Confidence 788754 44432 24799999874432222 233 544444 567776553 2 799999998
Q ss_pred CC--EEEE
Q 037368 294 NR--LIAH 299 (823)
Q Consensus 294 ~~--~i~~ 299 (823)
+. .+..
T Consensus 334 t~~l~~~~ 341 (361)
T 2oiz_A 334 QPEPKLLR 341 (361)
T ss_dssp SSSCEEEE
T ss_pred CCcceeeE
Confidence 87 5543
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.49 E-value=4.5e-06 Score=91.09 Aligned_cols=168 Identities=12% Similarity=0.097 Sum_probs=111.2
Q ss_pred CeEEEee--CCCEEEEEecCCeEEEEc-CC-----------CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccc
Q 037368 27 NITCCSS--GRGKVVIGCDDGAVSLLD-RG-----------LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQ 92 (823)
Q Consensus 27 ~is~~~~--~~~~l~~gs~dG~i~~~d-~~-----------~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~ 92 (823)
++++.+. ..+.+++|+.+| +.+|+ .+ .+.. ....+.+ |++++| ++++|+++ .++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~f--d~~~L~v~-~~~~----- 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCF--HGDQVLVS-TRNA----- 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEE--ETTEEEEE-ESSE-----
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccce-EEeeCCC-eeEEEE--CCCEEEEE-cCCc-----
Confidence 4555554 467889998886 55587 22 1222 2234667 999999 88999988 7776
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF 172 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~ 172 (823)
|++||+.... .......+ ..+ +.++.+.+. . +|+++.||+|.+|+.. + +. .
T Consensus 108 ----l~v~dv~sl~----------~~~~~~~~--~~~---v~~i~~~~p--~---~av~~~dG~L~v~dl~---~-~~-~ 158 (388)
T 1xip_A 108 ----LYSLDLEELS----------EFRTVTSF--EKP---VFQLKNVNN--T---LVILNSVNDLSALDLR---T-KS-T 158 (388)
T ss_dssp ----EEEEESSSTT----------CEEEEEEC--SSC---EEEEEECSS--E---EEEEETTSEEEEEETT---T-CC-E
T ss_pred ----EEEEEchhhh----------ccCcccee--ecc---eeeEEecCC--C---EEEEECCCCEEEEEcc---C-Cc-c
Confidence 9999998542 12223323 233 666665543 4 8888999999999863 1 11 1
Q ss_pred eEEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCC-cceEE------c---cCCCccceecccCCCeEEEe
Q 037368 173 KLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPP-KRQFL------D---NIGCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 173 ~~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~-~~~~l------~---~~~~~~~~~~~s~~~~liv~ 240 (823)
.. ....|++++|+|+| .++.+.++.+++|+.++... .+.++ . ++...+.+++|.++++|+++
T Consensus 159 ~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 159 KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EE---EEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 11 23479999999998 45556677899998875431 14445 2 25677888999999998765
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.46 E-value=1.7e-05 Score=85.12 Aligned_cols=187 Identities=12% Similarity=0.061 Sum_probs=105.7
Q ss_pred eEEEe-eCC-CEEEEEecC---C--eEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecC--------------
Q 037368 28 ITCCS-SGR-GKVVIGCDD---G--AVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGED-------------- 85 (823)
Q Consensus 28 is~~~-~~~-~~l~~gs~d---G--~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D-------------- 85 (823)
+++.. +++ +.|++++.+ | .|.+|+ .+++.. .+..+.. |..+.|+|+|+.|+.++.+
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 43343 334 478777654 3 477788 455554 3433444 9999999999999888753
Q ss_pred ----CCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC------
Q 037368 86 ----EQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG------ 155 (823)
Q Consensus 86 ----~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG------ 155 (823)
|.+...-....|.+||+... .+++.+.. . . +..++|+||+ . ++++..++
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~----------~~~~~l~~---~-~---~~~~~~spdg-~---~~~~~~~~~~~~~~ 197 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESE----------EVIEEFEK---P-R---FSSGIWHRDK-I---VVNVPHREIIPQYF 197 (347)
T ss_dssp CC---------CEEEEEEEETTTT----------EEEEEEEE---E-T---TCEEEEETTE-E---EEEEECCCSSCCSS
T ss_pred eeecCcccccCccceEEEEECCCC----------eEEeeecC---C-C---cccccCCCCe-E---EEEEeccccccccc
Confidence 10000000112888998732 12233332 1 2 7899999999 7 77776542
Q ss_pred -eEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcC--------CeEEEEEecCCCCcceEEccCCCcc
Q 037368 156 -CIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTP--------NSVILFSLQNQPPKRQFLDNIGCST 226 (823)
Q Consensus 156 -~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~--------~~V~~~d~~~~~~~~~~l~~~~~~~ 226 (823)
...+|..+ +.+.+.+..+ ..+..+ +|||+ .+++++.. ..|++|+ .+ ....+...+...+
T Consensus 198 ~~~~l~~~d-----~~~~~~l~~~-~~~~~~--spdg~-~l~~~~~~~~~~~~~~~~l~~~d-~~--~~~~l~~~~~~~~ 265 (347)
T 2gop_A 198 KFWDIYIWE-----DGKEEKMFEK-VSFYAV--DSDGE-RILLYGKPEKKYMSEHNKLYIYD-GK--EVMGILDEVDRGV 265 (347)
T ss_dssp CCEEEEEEE-----TTEEEEEEEE-ESEEEE--EECSS-CEEEEECCSSSCCCSSCEEEEEC-SS--CEEESSTTCCSEE
T ss_pred ccccEEEeC-----CCceEEeccC-cceeeE--CCCCC-EEEEEEccccCCccccceEEEEC-CC--ceEeccccCCccc
Confidence 44566543 1223334333 445544 89996 45555543 2577777 32 2333333444556
Q ss_pred ce-ecccCCCeEEEee-CCeEEEEecC
Q 037368 227 NS-VAMSDRLELIIGR-PEAVYFYEVD 251 (823)
Q Consensus 227 ~~-~~~s~~~~liv~~-~~~I~i~~~~ 251 (823)
.. +.|+ +|.++++. ++.+.+| ++
T Consensus 266 ~~~~~~s-dg~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 266 GQAKIKD-GKVYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEEEEET-TEEEEEEEETTEEEEE-EE
T ss_pred CCccEEc-CcEEEEEecCCcEEEE-Ec
Confidence 64 7888 77333333 4578888 76
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.45 E-value=1.3e-05 Score=95.36 Aligned_cols=238 Identities=9% Similarity=-0.048 Sum_probs=129.3
Q ss_pred CeEEEeeCCCEEEEEecCC-----eEEEEcC-CCeeeEeEe------ecccceeEEEEecCCCEEEEEec-CCCCccccc
Q 037368 27 NITCCSSGRGKVVIGCDDG-----AVSLLDR-GLKFNFGFQ------AHSSSVLFLQQLKQRNFLVTVGE-DEQVSAQQS 93 (823)
Q Consensus 27 ~is~~~~~~~~l~~gs~dG-----~i~~~d~-~~~~~~~~~------~H~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~ 93 (823)
.+++....+++++....++ .|.+.+. .++...-+. +|+..+..++|+|+|++||-++. +|. ....
T Consensus 71 ~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~-~~~~- 148 (695)
T 2bkl_A 71 SVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA-DEAV- 148 (695)
T ss_dssp EECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC-SCCE-
T ss_pred cCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC-ceEE-
Confidence 3444445567777665543 2444442 333222222 46668999999999999884333 221 0112
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCe-------------EEEE
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGC-------------IYCI 160 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~-------------V~l~ 160 (823)
|++||+.+.. . +. . . ..++....+++|+||++. |+.++.++. |.+|
T Consensus 149 ---i~v~dl~tg~--------~--~~--~--~-~~~~~~~~~~~wspDg~~---l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 149 ---LHVIDVDSGE--------W--SK--V--D-VIEGGKYATPKWTPDSKG---FYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp ---EEEEETTTCC--------B--CS--S--C-CBSCCTTCCCEECTTSSE---EEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred ---EEEEECCCCC--------C--cC--C--c-ccCcccccceEEecCCCE---EEEEEecCCCCCccccCCCCCEEEEE
Confidence 9999998532 1 10 0 0 001111367899999999 999988765 8888
Q ss_pred EcccccccccceeEEecC---CCCcceEEEeecCCeEEEEEEcCC----eEEEEEecCCCCcceEEccCCCccceecccC
Q 037368 161 KGDIARERITRFKLQVDN---QCSVMGLGFRVDGQALQLFAVTPN----SVILFSLQNQPPKRQFLDNIGCSTNSVAMSD 233 (823)
Q Consensus 161 ~~~~~~~~~~k~~~~~~~---~~~It~l~fs~dg~~~~l~~~t~~----~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~ 233 (823)
+..- .....+.+++. ...+.++.|++||+ .+++.+.++ .|++|+..+ +.. ..+..+........+ +
T Consensus 208 ~l~t---~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~-~~~-~~l~~~~~~~~~~~~-~ 280 (695)
T 2bkl_A 208 TLGT---EPSKDTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGE-KDF-RLLVKGVGAKYEVHA-W 280 (695)
T ss_dssp ETTS---CGGGCEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTC-SSC-EEEEECSSCCEEEEE-E
T ss_pred ECCC---CchhceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCC-Cce-EEeecCCCceEEEEe-c
Confidence 7531 11112344432 34688999999996 455555444 466665432 223 333322223333344 4
Q ss_pred CCeEEEeeC-----CeEEEEecCCCCc---cccccCC----eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 234 RLELIIGRP-----EAVYFYEVDGRGP---CWAFEGE----KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 234 ~~~liv~~~-----~~I~i~~~~g~~~---~~~~~g~----~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
+|.+++..+ ..|+.|++++... ...+..+ ...+++++++++...... ....|.++|+.++.
T Consensus 281 ~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d--g~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 281 KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKD--ATSEVRVATLKGKP 353 (695)
T ss_dssp TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEET--TEEEEEEEETTCCE
T ss_pred CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEEC--CEEEEEEEeCCCCe
Confidence 444655443 4799999864332 1112221 345667777776665421 22345555665553
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.41 E-value=4.5e-05 Score=80.29 Aligned_cols=185 Identities=11% Similarity=0.021 Sum_probs=111.6
Q ss_pred CCEE-EEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCC
Q 037368 35 RGKV-VIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSST 113 (823)
Q Consensus 35 ~~~l-~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~ 113 (823)
.+.| ++....+.|+.||..+.....+. +...+.+++++++|+++++. . +. |.+||....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v~~-~-~~---------l~~~d~~~g-------- 83 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVATI-G-TK---------FCALNWKEQ-------- 83 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEEEE-T-TE---------EEEEETTTT--------
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEEEE-C-Ce---------EEEEECCCC--------
Confidence 3444 66667899999995544333443 45789999999999966654 3 33 999998732
Q ss_pred CCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC---------CeEEEEEcccccccccceeEEecCCCCcce
Q 037368 114 SPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN---------GCIYCIKGDIARERITRFKLQVDNQCSVMG 184 (823)
Q Consensus 114 ~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d---------G~V~l~~~~~~~~~~~k~~~~~~~~~~It~ 184 (823)
. +..+.......+...+..++++|+|+. .++...+ +...+|+.+. ..+...+...-....+
T Consensus 84 ~---~~~~~~~~~~~~~~~~~di~~d~dG~l---~~~~~~~~~~~~~~~~~~~~l~~~d~----~g~~~~~~~~~~~png 153 (297)
T 3g4e_A 84 S---AVVLATVDNDKKNNRFNDGKVDPAGRY---FAGTMAEETAPAVLERHQGALYSLFP----DHHVKKYFDQVDISNG 153 (297)
T ss_dssp E---EEEEEECCTTCSSEEEEEEEECTTSCE---EEEEEECCSBTTBCCTTCEEEEEECT----TSCEEEEEEEESBEEE
T ss_pred c---EEEEEecCCCCCCCCCCCEEECCCCCE---EEecCCcccccccccCCCcEEEEEEC----CCCEEEEeeccccccc
Confidence 1 222211111112234889999999976 6654432 2345555431 1222333333334579
Q ss_pred EEEeecCCeEEEEEEc--CCeEEEEEec-CCCCc--ceEE---ccCCCccceecccCCCeEEEee--CCeEEEEecC
Q 037368 185 LGFRVDGQALQLFAVT--PNSVILFSLQ-NQPPK--RQFL---DNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVD 251 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t--~~~V~~~d~~-~~~~~--~~~l---~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~ 251 (823)
++|+++|+ .|+++. .++|+.|++. ..+.. .+.+ ......+..++++++|.+.++. ++.|..|+++
T Consensus 154 i~~spdg~--~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 154 LDWSLDHK--IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEECTTSC--EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred eEEcCCCC--EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 99999984 566654 4579999974 22221 1222 2222346678889999877653 3579999987
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.38 E-value=5.3e-05 Score=90.82 Aligned_cols=238 Identities=11% Similarity=0.026 Sum_probs=128.7
Q ss_pred CeEEEeeCCCEEEEEecCCe---EEEEc--C----CCeeeEeE-------eecccceeEEEEecCCCEEEEEecCCCCcc
Q 037368 27 NITCCSSGRGKVVIGCDDGA---VSLLD--R----GLKFNFGF-------QAHSSSVLFLQQLKQRNFLVTVGEDEQVSA 90 (823)
Q Consensus 27 ~is~~~~~~~~l~~gs~dG~---i~~~d--~----~~~~~~~~-------~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~ 90 (823)
.+++....+++++....++. -.+|. . .++.. .+ .+|...+..++|+|+|+.||.++.++....
T Consensus 110 ~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~ 188 (741)
T 1yr2_A 110 RFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGR-VLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDW 188 (741)
T ss_dssp EECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCE-EEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSE
T ss_pred ccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCE-EEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCce
Confidence 34444455667765554432 44444 3 33322 22 234457899999999999988876632111
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCe--------------
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGC-------------- 156 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~-------------- 156 (823)
. .|++||+.+.. .+.. .... ..+.+++|+|| +. |+.+..++.
T Consensus 189 ~----~i~v~dl~tg~----------~~~~-~~~~-----~~~~~~~wspD-~~---l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 189 R----TVKFVGVADGK----------PLAD-ELKW-----VKFSGLAWLGN-DA---LLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp E----EEEEEETTTCC----------EEEE-EEEE-----EESCCCEESTT-SE---EEEEECCCC--------CCCCCE
T ss_pred E----EEEEEECCCCC----------CCCc-cCCC-----ceeccEEEECC-CE---EEEEEecCcccccccccCCCCCE
Confidence 2 29999998532 2221 1111 11367899999 88 888887654
Q ss_pred EEEEEcccccccccceeEEecC-C--CCcceEEEeecCCeEEEEEEcC-----CeEEEEEecCCC-CcceEEccCCCccc
Q 037368 157 IYCIKGDIARERITRFKLQVDN-Q--CSVMGLGFRVDGQALQLFAVTP-----NSVILFSLQNQP-PKRQFLDNIGCSTN 227 (823)
Q Consensus 157 V~l~~~~~~~~~~~k~~~~~~~-~--~~It~l~fs~dg~~~~l~~~t~-----~~V~~~d~~~~~-~~~~~l~~~~~~~~ 227 (823)
|.+|+.. . .......+++. . ..+.++.|++||+ .+++.+.+ ..|++||+.+.. .....+..+.....
T Consensus 245 v~~~~lg--t-~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 245 VWLHRLG--T-PQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp EEEEETT--S-CGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred EEEEECC--C-CchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 6666632 0 11112344433 2 2488999999996 45555533 369999987542 21334432222222
Q ss_pred eecccCCC-eEEEeeC-----CeEEEEecCCC-Ccc-ccccCC---eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 228 SVAMSDRL-ELIIGRP-----EAVYFYEVDGR-GPC-WAFEGE---KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 228 ~~~~s~~~-~liv~~~-----~~I~i~~~~g~-~~~-~~~~g~---~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
.. ++|+| .+++..+ ..|+.|++++. +.. ..+.++ ...+.+++++++...... ....|.++|+.++.
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~d--g~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHD--AKSQVLAFDLDGKP 397 (741)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEET--TEEEEEEEETTSCE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEEC--CEEEEEEEeCCCCc
Confidence 22 23555 4555432 25889998752 111 112222 235677777777665421 23455666766654
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.38 E-value=1.4e-05 Score=95.21 Aligned_cols=243 Identities=9% Similarity=-0.021 Sum_probs=130.0
Q ss_pred eEEEe-eCC-CEEEEE-----ecCCeEEEEc-CCCeeeEeEeecccce--eEEEEecCCCEEEEEecCCCCccc----cc
Q 037368 28 ITCCS-SGR-GKVVIG-----CDDGAVSLLD-RGLKFNFGFQAHSSSV--LFLQQLKQRNFLVTVGEDEQVSAQ----QS 93 (823)
Q Consensus 28 is~~~-~~~-~~l~~g-----s~dG~i~~~d-~~~~~~~~~~~H~~~V--~~i~~~~~~~~l~s~s~D~~~~~~----~~ 93 (823)
+.+.. +++ ++|+++ +.+.+|++|| .+++.+. ..+-..+ ..++|+|+|+.|+.++.|.++..+ ..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 44333 344 466633 3346899999 5565431 1232223 789999999999999987641000 01
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC----eEEEEEcccccccc
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG----CIYCIKGDIARERI 169 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG----~V~l~~~~~~~~~~ 169 (823)
...|++|++.+.. .......... ..+ ..+.+++|+|||+. +++++.++ .|.+++. .+
T Consensus 201 ~~~v~~~~l~t~~--------~~~~lv~~~~--~~~-~~~~~~~~SpDG~~---l~~~~~~~~~~~~l~~~~~-----~~ 261 (695)
T 2bkl_A 201 YTTIRYHTLGTEP--------SKDTVVHERT--GDP-TTFLQSDLSRDGKY---LFVYILRGWSENDVYWKRP-----GE 261 (695)
T ss_dssp GCEEEEEETTSCG--------GGCEEEECCC--CCT-TCEEEEEECTTSCC---EEEEEEETTTEEEEEEECT-----TC
T ss_pred CCEEEEEECCCCc--------hhceEEEecC--CCC-EEEEEEEECCCCCE---EEEEEeCCCCceEEEEEcC-----CC
Confidence 1239999997431 1111111111 111 23889999999999 98888776 5555532 12
Q ss_pred cceeEEecCCCCcceEEEeecCCeEEEEEEc----CCeEEEEEecCCCC--cceEEccC-CCccceecccCCCeEEEe-e
Q 037368 170 TRFKLQVDNQCSVMGLGFRVDGQALQLFAVT----PNSVILFSLQNQPP--KRQFLDNI-GCSTNSVAMSDRLELIIG-R 241 (823)
Q Consensus 170 ~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t----~~~V~~~d~~~~~~--~~~~l~~~-~~~~~~~~~s~~~~liv~-~ 241 (823)
...+.+....+.+.+..| ++| .+++.++ ...|+.|++.+... ...++..+ ...+..++++ ++.++++ .
T Consensus 262 ~~~~~l~~~~~~~~~~~~-~~g--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 262 KDFRLLVKGVGAKYEVHA-WKD--RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp SSCEEEEECSSCCEEEEE-ETT--EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CceEEeecCCCceEEEEe-cCC--cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 234445544555666666 677 4344443 24699999865321 23334332 3445666776 5665543 3
Q ss_pred -CCeEEEE--ecCCCCc-cccccCC--eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 242 -PEAVYFY--EVDGRGP-CWAFEGE--KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 242 -~~~I~i~--~~~g~~~-~~~~~g~--~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
++..++| +..|... .+.+.+. ...+++ .++.++....+. ...++|.+||+.++.
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSF-TTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEET-TEEEEEEEEETTTCC
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEEECCCCc
Confidence 4455555 4444311 1222211 112222 345555443211 134789999997643
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.36 E-value=4.5e-05 Score=81.54 Aligned_cols=184 Identities=13% Similarity=0.077 Sum_probs=110.3
Q ss_pred EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCc
Q 037368 37 KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPD 116 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~ 116 (823)
.++++..++.|..||..+...+.+. +...|.++.++++|++++++ .++ |.+||.... .
T Consensus 63 l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~~g----------l~~~d~~~g--------~-- 120 (326)
T 2ghs_A 63 AWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-DDG----------LFLRDTATG--------V-- 120 (326)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-TTE----------EEEEETTTC--------C--
T ss_pred EEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-CCC----------EEEEECCCC--------c--
Confidence 4567778899999995444333454 45689999999999988865 443 889998632 1
Q ss_pred eEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEcccccccccceeEEecCCCCcceEEEeecCC
Q 037368 117 CIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQ 192 (823)
Q Consensus 117 ~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~ 192 (823)
+..+.......+...+..++++|+|+. .++...+ +...||..+ + .+...+........+++|+++|+
T Consensus 121 -~~~~~~~~~~~~~~~~~~i~~d~~G~l---~v~~~~~~~~~~~~~l~~~~---~--g~~~~~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 121 -LTLHAELESDLPGNRSNDGRMHPSGAL---WIGTMGRKAETGAGSIYHVA---K--GKVTKLFADISIPNSICFSPDGT 191 (326)
T ss_dssp -EEEEECSSTTCTTEEEEEEEECTTSCE---EEEEEETTCCTTCEEEEEEE---T--TEEEEEEEEESSEEEEEECTTSC
T ss_pred -EEEEeeCCCCCCCCCCCCEEECCCCCE---EEEeCCCcCCCCceEEEEEe---C--CcEEEeeCCCcccCCeEEcCCCC
Confidence 112221110111134889999999976 5544332 233444332 1 12222222223467899999984
Q ss_pred eEEEEEEc--CCeEEEEEec--CC-C-CcceEE---ccCCCccceecccCCCeEEEee--CCeEEEEecCCC
Q 037368 193 ALQLFAVT--PNSVILFSLQ--NQ-P-PKRQFL---DNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGR 253 (823)
Q Consensus 193 ~~~l~~~t--~~~V~~~d~~--~~-~-~~~~~l---~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~ 253 (823)
.++++. .++|++|++. +. . .....+ ......+..++++++|.+.++. ++.|..|+.+|+
T Consensus 192 --~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 192 --TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp --EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred --EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 555553 3579999985 22 1 111222 2223345678888899877664 468999998654
No 210
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.29 E-value=0.00015 Score=79.52 Aligned_cols=245 Identities=13% Similarity=0.135 Sum_probs=175.4
Q ss_pred cChHHHHHHHHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcCh---HHHHHHhhchh
Q 037368 331 KDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP---SYVIQKFLDAQ 407 (823)
Q Consensus 331 ~~~~~~i~~L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~ep---s~vI~kFl~~~ 407 (823)
.........|++.++|+.|++.+++.+ ++ ..++...+-++..|+|+.|.....+. . ..| ..+|..|.+.+
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA~-~~----~~Wk~v~~aCv~~~ef~lA~~~~l~L-~-~~ad~l~~lv~~Yek~G 221 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKAN-ST----RTWKEVCFACVDGKEFRLAQMCGLHI-V-VHADELEELINYYQDRG 221 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHHT-CH----HHHHHHHHHHHHTTCHHHHHHTTTTT-T-TCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHcC-Cc----hhHHHHHHHHHHcCcHHHHHHHHHHH-H-hCHhhHHHHHHHHHHCC
Confidence 355677888999999999999998864 22 45677778888999999996655542 2 344 34666788888
Q ss_pred hHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhC
Q 037368 408 RIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAG 487 (823)
Q Consensus 408 ~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~ 487 (823)
+.+.++.||+.-.....+...--|.|-.+|+|-+ .+++.+-++... ...++..+++.|.+.--..++.+|.-.++
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~-p~k~~ehl~~~~----~~ini~k~~~~~~~~~~w~e~~~ly~~~~ 296 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSKFK-PQKMREHLELFW----SRVNIPKVLRAAEQAHLWAELVFLYDKYE 296 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC-HHHHHHHHHHHS----TTSCHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHH----HHhcCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999854333444444566777888874 455555555432 26899999999999999999999998888
Q ss_pred ChHHHHHHHHHhhcC-HH--HHHHHHhcCChHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCC
Q 037368 488 KHELYLKILLEDLGR-YD--EALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSM 564 (823)
Q Consensus 488 ~~~~~l~il~~~~~~-~~--~al~yl~~l~~~~~~~~i~k~~~~Ll~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 564 (823)
+++.++...++.... |+ .=.+.+.+.... ++.+|=..-.+...|....+++.-+. .
T Consensus 297 e~d~A~~tm~~h~~~a~~~~~f~~~~~kv~n~---elyYkai~fyl~~~p~~l~~ll~~l~------------------~ 355 (449)
T 1b89_A 297 EYDNAIITMMNHPTDAWKEGQFKDIITKVANV---ELYYRAIQFYLEFKPLLLNDLLMVLS------------------P 355 (449)
T ss_dssp CHHHHHHHHHHSTTTTCCHHHHHHHHHHCSST---HHHHHHHHHHHHHCGGGHHHHHHHHG------------------G
T ss_pred hHHHHHHHHHhCChhhhhhHHHHHHHhchhHH---HHHHHHHHHHHhcCHHHHHHHHHHHH------------------h
Confidence 888888777775321 11 122333343322 46666555677999999888876652 2
Q ss_pred CCCHHHHHhhhcc--CcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccc
Q 037368 565 LPSPVDFLNIFVH--HPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSY 613 (823)
Q Consensus 565 ~~~~~~~~~~f~~--~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~ 613 (823)
++++.+++.+|.. +-..+..||+.+-..+ .+.+-..|-+||++.
T Consensus 356 ~ld~~r~v~~~~~~~~l~l~~~yl~~v~~~n-----~~~vnealn~l~iee 401 (449)
T 1b89_A 356 RLDHTRAVNYFSKVKQLPLVKPYLRSVQNHN-----NKSVNESLNNLFITE 401 (449)
T ss_dssp GCCHHHHHHHHHHTTCTTTTHHHHHHHHTTC-----CHHHHHHHHHHHHHT
T ss_pred ccCcHHHHHHHHHcCCcHHHHHHHHHHHHhh-----HHHHHHHHHHHHHhh
Confidence 6889999999975 4446778998876442 358888999999986
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.23 E-value=0.00031 Score=72.94 Aligned_cols=225 Identities=11% Similarity=0.026 Sum_probs=135.6
Q ss_pred cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 63 HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 63 H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
....+.+|.++++|++.++...++. |.+||.. .. ...+..... ...+.++++++++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~---------v~~~~~~-~~-----------~~~~~~~~~---~~~~~~i~~~~~g 73 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANK---------ISSLDQS-GR-----------IKEFEVPTP---DAKVMCLIVSSLG 73 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTE---------EEEECTT-SC-----------EEEEECSST---TCCEEEEEECTTS
T ss_pred CCCCcceeeECCCCCEEEEcCCCCe---------EEEECCC-Cc-----------eEEEECCCC---CCcceeEEECCCC
Confidence 3457899999999998888776776 9999876 21 112222111 1238999999998
Q ss_pred CCcceEEEEEeCCeEEEEEcccccccccceeEE-ec-CCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcce-
Q 037368 143 PPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VD-NQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQ- 217 (823)
Q Consensus 143 ~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~-~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~- 217 (823)
.. .++...++.|..++.+ + +...+ .. ....+.++++.++|+ +++++ .++|..|+..++ ...
T Consensus 74 ~l---~v~~~~~~~v~~~d~~-----g-~~~~~~~~~~~~~~~~i~~~~~g~---l~v~~~~~~~i~~~~~~g~--~~~~ 139 (300)
T 2qc5_A 74 DI---WFTENGANKIGKLSKK-----G-GFTEYPLPQPDSGPYGITEGLNGD---IWFTQLNGDRIGKLTADGT--IYEY 139 (300)
T ss_dssp CE---EEEETTTTEEEEECTT-----S-CEEEEECSSTTCCEEEEEECSTTC---EEEEETTTTEEEEECTTSC--EEEE
T ss_pred CE---EEEecCCCeEEEECCC-----C-CeEEecCCCCCCCCccceECCCCC---EEEEccCCCeEEEECCCCC--EEEc
Confidence 77 7666657889888752 1 22222 11 235688999998873 44444 457888887632 221
Q ss_pred EEccCCCccceecccCCCeEEEee--CCeEEEEecCCCCccccccC---CeEEEEeeC-cEEEEEEecCCCCccEEEEEe
Q 037368 218 FLDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGRGPCWAFEG---EKKLLGWFR-GYLLCVIADQRNSKNIFNVYD 291 (823)
Q Consensus 218 ~l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~~~~~~~~g---~~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D 291 (823)
.+......+.+++++++|.+.++. ++.|..|+..++...+...+ .+..+.... ..+.++.. ..+.|.+||
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~----~~~~i~~~~ 215 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEI----MGNKIGRIT 215 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEET----TTTEEEEEC
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEcc----CCCEEEEEc
Confidence 122234456788888999877665 45899998854422222221 244555542 23333332 246899999
Q ss_pred CCCCEEEEec--cccceeEE-EeecCcEEEEEc-CCeEEEEe
Q 037368 292 LKNRLIAHSL--VVKEVSHM-LCEWGNIILVMT-DKSVLCIG 329 (823)
Q Consensus 292 ~~~~~i~~~~--~i~~v~~v-~~~~~~~~vvs~-~~~v~~l~ 329 (823)
..++...+.. ....+..+ +.+.+.+|+.+. ++.|.++.
T Consensus 216 ~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 216 TTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp TTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 9666554432 22234444 445667777764 36677664
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.19 E-value=0.0002 Score=85.72 Aligned_cols=239 Identities=11% Similarity=0.025 Sum_probs=128.4
Q ss_pred CEEEEEecC-----CeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCc-----ccccceeEEEEeCCC
Q 037368 36 GKVVIGCDD-----GAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVS-----AQQSAVCLKVFDLDK 104 (823)
Q Consensus 36 ~~l~~gs~d-----G~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~-----~~~~~~~vkvWdl~~ 104 (823)
++|++++.+ .+|++|| .+++.+. ...+...+..++|+|+ +.|+.++.|++.. .......|.+|++.+
T Consensus 175 ~~la~~~~~~G~e~~~i~v~dl~tg~~~~-~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt 252 (741)
T 1yr2_A 175 RLLAYSVQDGGSDWRTVKFVGVADGKPLA-DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGT 252 (741)
T ss_dssp SEEEEEEEETTCSEEEEEEEETTTCCEEE-EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTS
T ss_pred CEEEEEEcCCCCceEEEEEEECCCCCCCC-ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCC
Confidence 577776544 4699999 5666542 3333444578999999 9999888776410 000011288899864
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC-----eEEEEEcccccccccc-eeEEecC
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG-----CIYCIKGDIARERITR-FKLQVDN 178 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG-----~V~l~~~~~~~~~~~k-~~~~~~~ 178 (823)
.. ........ ....| ..+.+++|+|||+. ++++..++ .|.+|+.+ ..... .+.+...
T Consensus 253 ~~--------~~~~lv~~--~~~~~-~~~~~~~~SpDG~~---l~~~~~~~~~~~~~l~~~d~~---~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 253 PQ--------SADQPVFA--TPELP-KRGHGASVSSDGRW---VVITSSEGTDPVNTVHVARVT---NGKIGPVTALIPD 315 (741)
T ss_dssp CG--------GGCEEEEC--CTTCT-TCEEEEEECTTSCE---EEEEEECTTCSCCEEEEEEEE---TTEECCCEEEECS
T ss_pred Cc--------hhCEEEec--cCCCC-eEEEEEEECCCCCE---EEEEEEccCCCcceEEEEECC---CCCCcccEEecCC
Confidence 21 00111111 11111 23789999999999 88887654 77777652 11113 4445544
Q ss_pred CCCcceEEEeecCCeEEEEEEcCC----eEEEEEecCC-CCcceEEccCCCccceecccCCCeEEE-ee-CCeEEE--Ee
Q 037368 179 QCSVMGLGFRVDGQALQLFAVTPN----SVILFSLQNQ-PPKRQFLDNIGCSTNSVAMSDRLELII-GR-PEAVYF--YE 249 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t~~----~V~~~d~~~~-~~~~~~l~~~~~~~~~~~~s~~~~liv-~~-~~~I~i--~~ 249 (823)
...+.... +++|+ .+++.++.+ .|+.|++.+. .....++..+...+..++++ ++.+++ +. ++..++ ++
T Consensus 316 ~~~~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 316 LKAQWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSCEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCceEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 44555553 47775 455555432 4999998753 12334444443445555665 555554 33 444444 45
Q ss_pred cCCCCc-cccccC--CeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 250 VDGRGP-CWAFEG--EKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 250 ~~g~~~-~~~~~g--~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
..|... .+.+++ ....+++ .++.++....+. ...++|.+||+.++..
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~-~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSF-TQPATVLALDPATAKT 444 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEET-TEEEEEEEEETTTTEE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCC-CCCCEEEEEECCCCcE
Confidence 444311 123322 2233443 344444432211 1347899999987653
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.19 E-value=0.0016 Score=70.74 Aligned_cols=262 Identities=7% Similarity=-0.028 Sum_probs=141.6
Q ss_pred CCEEEEEec-----CCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEe----------cCCCCcccccceeEE
Q 037368 35 RGKVVIGCD-----DGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVG----------EDEQVSAQQSAVCLK 98 (823)
Q Consensus 35 ~~~l~~gs~-----dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s----------~D~~~~~~~~~~~vk 98 (823)
.+.+++.+. ++.|.++| .+++.+.++..-..+ ++.++|+|++|..++ .+++ |.
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~---------Vs 112 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDY---------VE 112 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE---------EE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCE---------EE
Confidence 356666654 68999999 788988888764445 499999999886664 2444 99
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCC--CCCceEEEEEecCCCCcceEEEEEe--CCeEEEEEcccccccccceeE
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQF--PEAKITSFLVLEEAPPILLIAIGLD--NGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~ 174 (823)
+||..+. ..++++.+..... .+.....++|+|||+. +.++.. +++|.+++.. .......
T Consensus 113 viD~~t~----------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~---lyVan~~~~~~VsVID~~----t~~vv~t 175 (386)
T 3sjl_D 113 VFDPVTL----------LPTADIELPDAPRFLVGTYPWMTSLTPDGKT---LLFYQFSPAPAVGVVDLE----GKAFKRM 175 (386)
T ss_dssp EECTTTC----------CEEEEEEETTCCCCCBSCCGGGEEECTTSSE---EEEEECSSSCEEEEEETT----TTEEEEE
T ss_pred EEECCCC----------eEEEEEECCCccccccCCCCceEEEcCCCCE---EEEEEcCCCCeEEEEECC----CCcEEEE
Confidence 9999853 2566666532000 0112578999999998 777753 6889999863 1111112
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcce----EEccCCCccc-eecc-cCCCeEE-EeeCCeEEE
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQ----FLDNIGCSTN-SVAM-SDRLELI-IGRPEAVYF 247 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~----~l~~~~~~~~-~~~~-s~~~~li-v~~~~~I~i 247 (823)
+ .-.+ . ...+ |.|...++..+.++++.+.++...+.... .++....++. -..| .++|+++ ++.++.|++
T Consensus 176 I-~v~g-~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v 251 (386)
T 3sjl_D 176 L-DVPD-C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQ 251 (386)
T ss_dssp E-ECCS-E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEE
T ss_pred E-ECCC-c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEE
Confidence 2 1111 1 1122 33322334444455566666643221111 1111111111 1244 3688755 455568999
Q ss_pred EecCCCCcc----cc-c-----------cC-CeEEEEeeCcEEEEEEecC-----CCCccEEEEEeCCCCEEEEeccccc
Q 037368 248 YEVDGRGPC----WA-F-----------EG-EKKLLGWFRGYLLCVIADQ-----RNSKNIFNVYDLKNRLIAHSLVVKE 305 (823)
Q Consensus 248 ~~~~g~~~~----~~-~-----------~g-~~~~i~~~~~ylv~~s~d~-----~~~~~~I~I~D~~~~~i~~~~~i~~ 305 (823)
.+..+.... +. + +| ....+...+..+.+...+. +....+|.++|+.++.+.-...+..
T Consensus 252 ~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~ 331 (386)
T 3sjl_D 252 IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH 331 (386)
T ss_dssp EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred EECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC
Confidence 988654321 11 1 11 1233444455555554211 1124689999998876654443332
Q ss_pred -eeEE-EeecCc-E-EEEEc-CCeEEEE
Q 037368 306 -VSHM-LCEWGN-I-ILVMT-DKSVLCI 328 (823)
Q Consensus 306 -v~~v-~~~~~~-~-~vvs~-~~~v~~l 328 (823)
+..+ ++.++. . |+... ++.|..+
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsVi 359 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIH 359 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEE
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEE
Confidence 3333 566665 3 43333 4455444
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.15 E-value=0.00021 Score=75.05 Aligned_cols=201 Identities=11% Similarity=0.086 Sum_probs=118.1
Q ss_pred CeEEEee-CC-CEEEEEecCCeEEEEcCCCeeeEe-Eee---c-ccceeEEEEecCCCEEEEEecCCC--------Cccc
Q 037368 27 NITCCSS-GR-GKVVIGCDDGAVSLLDRGLKFNFG-FQA---H-SSSVLFLQQLKQRNFLVTVGEDEQ--------VSAQ 91 (823)
Q Consensus 27 ~is~~~~-~~-~~l~~gs~dG~i~~~d~~~~~~~~-~~~---H-~~~V~~i~~~~~~~~l~s~s~D~~--------~~~~ 91 (823)
.+.+++. ++ +.+++++..+.|.+||.+++.... ... + ...+.+|+++++|++.++.+.++. ...+
T Consensus 72 ~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~ 151 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK 151 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred CCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCC
Confidence 4555555 45 788888877789999955665422 221 1 245899999999998888765520 0000
Q ss_pred ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEe----cCCCCcceEEEE-EeCCeEEEEEccccc
Q 037368 92 QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVL----EEAPPILLIAIG-LDNGCIYCIKGDIAR 166 (823)
Q Consensus 92 ~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~----~d~~~~~~ia~G-~~dG~V~l~~~~~~~ 166 (823)
. ..|..|+.. . . ........ ..+..++++ |+++. +.++ ..++.|.+|+.+- .
T Consensus 152 ~--~~l~~~~~~-g--------~--~~~~~~~~------~~~~~i~~~~~~d~dg~~---l~v~~~~~~~i~~~~~~~-~ 208 (314)
T 1pjx_A 152 F--GSIYCFTTD-G--------Q--MIQVDTAF------QFPNGIAVRHMNDGRPYQ---LIVAETPTKKLWSYDIKG-P 208 (314)
T ss_dssp C--EEEEEECTT-S--------C--EEEEEEEE------SSEEEEEEEECTTSCEEE---EEEEETTTTEEEEEEEEE-T
T ss_pred C--CeEEEECCC-C--------C--EEEeccCC------CCcceEEEecccCCCCCE---EEEEECCCCeEEEEECCC-C
Confidence 0 005555543 1 1 22222211 116889999 99865 5444 5678999997420 0
Q ss_pred ccccceeEEec--C-C-CCcceEEEeecCCeEEEEEE--cCCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEE
Q 037368 167 ERITRFKLQVD--N-Q-CSVMGLGFRVDGQALQLFAV--TPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LII 239 (823)
Q Consensus 167 ~~~~k~~~~~~--~-~-~~It~l~fs~dg~~~~l~~~--t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv 239 (823)
........+.. . . ..+.+++++++|+ ++++ ..++|..|+..+. .....+..+...+.+++++|+|. +.+
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~---l~v~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~i~~~~dg~~l~v 284 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDEDNN---LLVANWGSSHIEVFGPDGG-QPKMRIRCPFEKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBTTCC---EEEEEETTTEEEEECTTCB-SCSEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CccccceEEEECCCCCCCCCCceEECCCCC---EEEEEcCCCEEEEEcCCCC-cEeEEEeCCCCCceeEEECCCCCEEEE
Confidence 00001112221 1 1 5578999999883 4444 4568999997632 23344443445677888999987 666
Q ss_pred eeCC--eEEEEecCCCC
Q 037368 240 GRPE--AVYFYEVDGRG 254 (823)
Q Consensus 240 ~~~~--~I~i~~~~g~~ 254 (823)
+..+ .|..|++...+
T Consensus 285 ~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 285 TEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EETTTTEEEEEECSSCB
T ss_pred EeCCCCeEEEEeCCCCC
Confidence 6544 89999887543
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.10 E-value=0.00052 Score=75.85 Aligned_cols=190 Identities=11% Similarity=0.020 Sum_probs=109.9
Q ss_pred eEEEee-CCCEEEEE-ecCCeEEEEcCC-CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 28 ITCCSS-GRGKVVIG-CDDGAVSLLDRG-LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 28 is~~~~-~~~~l~~g-s~dG~i~~~d~~-~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
...++. +++.|+++ ..++.|+.||.+ +.+. ++........ ++++++++.|+++..++... |.+|+...
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~-~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~-------I~~~d~~~ 203 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT-TVHPGFKGGK-PAVTKDKQRVYSIGWEGTHT-------VYVYMKAS 203 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEE-EEEETCCBCB-CEECTTSSEEEEEBSSTTCE-------EEEEEGGG
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE-EeeccCCCCc-eeEecCCCcEEEEecCCCce-------EEEEEcCC
Confidence 445554 45666555 456899999955 4544 4433333334 99999999998888766300 77777653
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE----ecC-C
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ----VDN-Q 179 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~----~~~-~ 179 (823)
. . ..+.+.... ......+.+++++|+... +.+...+|.|..|+.+ +....++ ..+ .
T Consensus 204 ~--------~--~~~~~g~~~-~~~~~~p~~iav~p~~g~---lyv~d~~~~I~~~d~~-----~~~~~~~~~~~~~g~~ 264 (409)
T 3hrp_A 204 G--------W--APTRIGQLG-STFSGKIGAVALDETEEW---LYFVDSNKNFGRFNVK-----TQEVTLIKQLELSGSL 264 (409)
T ss_dssp T--------T--CEEEEEECC-TTSCSCCCBCEECTTSSE---EEEECTTCEEEEEETT-----TCCEEEEEECCCCSCC
T ss_pred C--------c--eeEEeeecc-chhcCCcEEEEEeCCCCe---EEEEECCCcEEEEECC-----CCCEEEEecccccCCC
Confidence 2 1 122221110 001133789999995444 5556667889888753 1122222 111 1
Q ss_pred C--CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCC---------------CccceecccCCCeEEEe
Q 037368 180 C--SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIG---------------CSTNSVAMSDRLELIIG 240 (823)
Q Consensus 180 ~--~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~---------------~~~~~~~~s~~~~liv~ 240 (823)
+ |..+|+|++++. .|+++. .+.|+.|+.++. ..++.+++ ..+..++++|+|.+.++
T Consensus 265 ~~~P~~~ia~~p~~g--~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 265 GTNPGPYLIYYFVDS--NFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CCSSCCEEEEETTTT--EEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCCccccEEEeCCCC--EEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 2 234999999542 466664 346888887653 22222211 22557889999987765
Q ss_pred e---CCeEEEEec
Q 037368 241 R---PEAVYFYEV 250 (823)
Q Consensus 241 ~---~~~I~i~~~ 250 (823)
- +..|+.|+.
T Consensus 340 d~~~~~~I~~~~~ 352 (409)
T 3hrp_A 340 DGFKGYCLRKLDI 352 (409)
T ss_dssp ETTTTCEEEEEET
T ss_pred eCCCCCEEEEEEC
Confidence 3 358999984
No 216
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.08 E-value=0.0002 Score=74.56 Aligned_cols=177 Identities=11% Similarity=0.083 Sum_probs=110.6
Q ss_pred EeeCCCEEEEEecCCeEEEEcCCCeeeEeEeecc-cceeEEEEecCCCEEEEEec-CCCCcccccceeEEEEeCCCCCCC
Q 037368 31 CSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQAHS-SSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 31 ~~~~~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
...+++.+++ +.++.|..||++|+.+..|+.+. ..+..+.+.++|+++++.+. ++. |..+|.+.
T Consensus 43 ~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~---------v~~vd~~G---- 108 (276)
T 3no2_A 43 AATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPST---------ILEVNMKG---- 108 (276)
T ss_dssp EECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEE---------EEEECTTS----
T ss_pred EECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCE---------EEEEeCCC----
Confidence 3345565655 56888999999999999998864 57889999999999999877 443 55555431
Q ss_pred CCCCCCCceEEEEEeccC-CCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEE
Q 037368 109 GTSSTSPDCIGILRVFTS-QFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGF 187 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~-~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~f 187 (823)
..+..+..... ..+...+..+++.++++. +++.+.+|.|..|+.+ + +..-.+.....+.++.+
T Consensus 109 -------k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~---lv~~~~~~~v~~~d~~-----G-~~~w~~~~~~~~~~~~~ 172 (276)
T 3no2_A 109 -------EVLSKTEFETGIERPHAQFRQINKNKKGNY---LVPLFATSEVREIAPN-----G-QLLNSVKLSGTPFSSAF 172 (276)
T ss_dssp -------CEEEEEEECCSCSSGGGSCSCCEECTTSCE---EEEETTTTEEEEECTT-----S-CEEEEEECSSCCCEEEE
T ss_pred -------CEEEEEeccCCCCcccccccCceECCCCCE---EEEecCCCEEEEECCC-----C-CEEEEEECCCCccceeE
Confidence 24444443210 000012566788999999 9999999999999752 2 22222333456777888
Q ss_pred eecCCeEEEEEEcCC-eEEEEEecCCCCcceEEccC---CCc---cceecccCCCeEEEe
Q 037368 188 RVDGQALQLFAVTPN-SVILFSLQNQPPKRQFLDNI---GCS---TNSVAMSDRLELIIG 240 (823)
Q Consensus 188 s~dg~~~~l~~~t~~-~V~~~d~~~~~~~~~~l~~~---~~~---~~~~~~s~~~~liv~ 240 (823)
.++| .++++.+.+ .|..+|..+. ...-.+... +.. +..+...++|.++++
T Consensus 173 ~~~g--~~~v~~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 173 LDNG--DCLVACGDAHCFVQLNLESN-RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp CTTS--CEEEECBTTSEEEEECTTTC-CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEE
T ss_pred cCCC--CEEEEeCCCCeEEEEeCcCC-cEEEEecCCCCCCccccccccceEcCCCCEEEE
Confidence 8887 455555544 5888887632 233333211 111 334455567766554
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.05 E-value=0.00018 Score=85.35 Aligned_cols=203 Identities=10% Similarity=0.073 Sum_probs=116.7
Q ss_pred cccceeEEEEecCCCEEEEEec-CCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC
Q 037368 63 HSSSVLFLQQLKQRNFLVTVGE-DEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE 141 (823)
Q Consensus 63 H~~~V~~i~~~~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d 141 (823)
|...|..++|+|+|++||-+.+ .|. ... .|+|||+.+. . .+.. .+.. .+..+++|+ |
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~-~~~----~i~v~dl~tg--------~--~~~~-~~~~-----~k~~~~~Ws-D 184 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGS-DWR----EIHLMDVESK--------Q--PLET-PLKD-----VKFSGISWL-G 184 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSC-CEE----EEEEEETTTC--------S--EEEE-EEEE-----EESCCCEEE-T
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCC-ceE----EEEEEECCCC--------C--CCcc-ccCC-----ceeccEEEe-C
Confidence 5567899999999998874433 231 112 2999999853 2 2221 1111 113567899 9
Q ss_pred CCCcceEEEEEeCCe-------------EEEEEcccccccccceeEEecCCC----CcceEEEeecCCeEEEEEEcC---
Q 037368 142 APPILLIAIGLDNGC-------------IYCIKGDIARERITRFKLQVDNQC----SVMGLGFRVDGQALQLFAVTP--- 201 (823)
Q Consensus 142 ~~~~~~ia~G~~dG~-------------V~l~~~~~~~~~~~k~~~~~~~~~----~It~l~fs~dg~~~~l~~~t~--- 201 (823)
++. |+.++.++. |.+|+... .......+++... .+.++.|++||+ .+++.+..
T Consensus 185 g~~---l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt---~~~~~~~v~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~ 257 (693)
T 3iuj_A 185 NEG---FFYSSYDKPDGSELSARTDQHKVYFHRLGT---AQEDDRLVFGAIPAQHHRYVGATVTEDDR-FLLISAANSTS 257 (693)
T ss_dssp TTE---EEEEESSCCC-------CCCCEEEEEETTS---CGGGCEEEESCSGGGCCSEEEEEECTTSC-EEEEEEESSSS
T ss_pred CCE---EEEEEecCcccccccccCCCcEEEEEECCC---CcccceEEEecCCCCCeEEEEEEEcCCCC-EEEEEEccCCC
Confidence 998 999887743 77776421 1112234444322 467899999996 44444431
Q ss_pred -CeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee-C----CeEEEEecCCCCc-c-ccc--cC-CeEEEEee
Q 037368 202 -NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR-P----EAVYFYEVDGRGP-C-WAF--EG-EKKLLGWF 269 (823)
Q Consensus 202 -~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~-~----~~I~i~~~~g~~~-~-~~~--~g-~~~~i~~~ 269 (823)
+.|+++++.+.......+..+....... +++ ++++++.. . ..|+.+++++... . ..+ +. ....++++
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~ 336 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSG 336 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEE
Confidence 3699999875432334443332222222 444 55665433 2 3688888874322 0 111 11 12267788
Q ss_pred CcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 270 RGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 270 ~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
+++|+....+. ....|.+||+.++..
T Consensus 337 g~~lv~~~~~~--g~~~l~~~d~~g~~~ 362 (693)
T 3iuj_A 337 SGYLFAEYMVD--ATARVEQFDYEGKRV 362 (693)
T ss_dssp TTEEEEEEEET--TEEEEEEECTTSCEE
T ss_pred CCEEEEEEEEC--CeeEEEEEECCCCee
Confidence 99988876532 235899999987643
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.01 E-value=0.00025 Score=75.05 Aligned_cols=250 Identities=14% Similarity=0.117 Sum_probs=138.4
Q ss_pred EEEee-CCCEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCC
Q 037368 29 TCCSS-GRGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEP 107 (823)
Q Consensus 29 s~~~~-~~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~ 107 (823)
++++. .++.+++|+.+ |..+|.+++.+..+..+........+. +..|..++.++. |..+|.. ..
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~---------l~~~d~~-g~- 127 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGH---------LYAINTD-GT- 127 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSE---------EEEECTT-SC-
T ss_pred cceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCE---------EEEEcCC-CC-
Confidence 44444 46788888766 888887777655554444333334443 345555666665 8888875 21
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEE
Q 037368 108 EGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGF 187 (823)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~f 187 (823)
........ . ..+.++++++++ . +.+|+.+|.|..++.. +............+.++.+
T Consensus 128 ---------~~~~~~~~--~---~~~~~~~~~~~g-~---l~vgt~~~~l~~~d~~-----g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 128 ---------EKWRFKTK--K---AIYATPIVSEDG-T---IYVGSNDNYLYAINPD-----GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp ---------EEEEEECS--S---CCCSCCEECTTS-C---EEEECTTSEEEEECTT-----SCEEEEEECSSCCCSCCEE
T ss_pred ---------EEEEEcCC--C---ceeeeeEEcCCC-E---EEEEcCCCEEEEECCC-----CCEeEEEecCCCceeeeEE
Confidence 22222211 1 125666777766 4 6677878999988752 1111111122445777777
Q ss_pred eecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCCccccccC--C-e
Q 037368 188 RVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRGPCWAFEG--E-K 263 (823)
Q Consensus 188 s~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~~~~~~~g--~-~ 263 (823)
..+| .+++++ +++..|+..++ ...........+.++...++|.+.++. ++.+..++.+|+.. +.+.. . .
T Consensus 185 d~~g---~l~v~t-~~l~~~d~~g~--~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~-~~~~~~~~~~ 257 (330)
T 3hxj_A 185 GKDG---TIYFGS-DKVYAINPDGT--EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEK-WRFKTGKRIE 257 (330)
T ss_dssp CTTC---CEEEES-SSEEEECTTSC--EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEE-EEEECSSCCC
T ss_pred cCCC---EEEEEe-CEEEEECCCCc--EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEe-EEeeCCCCcc
Confidence 6666 477777 88999983322 222233233446677777888888776 46898887654321 22211 1 1
Q ss_pred EEEEee-CcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccc--eeEEEe-ecCcEEEEEcCCeEEEEe
Q 037368 264 KLLGWF-RGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKE--VSHMLC-EWGNIILVMTDKSVLCIG 329 (823)
Q Consensus 264 ~~i~~~-~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~--v~~v~~-~~~~~~vvs~~~~v~~l~ 329 (823)
..+... +..|.+++ .++.|..+|..++.+. ...+.. +..++. ..+.+|+.+.+|.+....
T Consensus 258 ~~~~~~~~g~l~v~t-----~~ggl~~~d~~g~~~~-~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 258 SSPVIGNTDTIYFGS-----YDGHLYAINPDGTEKW-NFETGSWIIATPVIDENGTIYFGTRNGKFYALF 321 (330)
T ss_dssp SCCEECTTSCEEEEC-----TTCEEEEECTTSCEEE-EEECSSCCCSCCEECTTCCEEEECTTSCEEEEE
T ss_pred ccceEcCCCeEEEec-----CCCCEEEECCCCcEEE-EEEcCCccccceEEcCCCEEEEEcCCCeEEEEe
Confidence 112223 34555554 3468899998655443 222222 333333 567788877777666554
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.99 E-value=0.0011 Score=73.07 Aligned_cols=223 Identities=8% Similarity=0.003 Sum_probs=127.5
Q ss_pred ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCc
Q 037368 66 SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPI 145 (823)
Q Consensus 66 ~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~ 145 (823)
....|+++++|+++++...++. |++||+... .+.++.. .... .. ++|+|+++.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~---------I~~id~~~g-----------~~~~~~~-~~~~----~~-ia~~~~g~~- 184 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPR---------VRLISVDDN-----------KVTTVHP-GFKG----GK-PAVTKDKQR- 184 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTE---------EEEEETTTT-----------EEEEEEE-TCCB----CB-CEECTTSSE-
T ss_pred CceEEEEeCCCCEEEEecCCCc---------EEEEECCCC-----------EEEEeec-cCCC----Cc-eeEecCCCc-
Confidence 5788999999998887776666 999998742 1222221 1122 34 999999988
Q ss_pred ceEEEEEeCC--eEEEEEcccccccccceeEE----ecCCCCcceEEEeecCCeEEEEEEcC-CeEEEEEecCCCCcceE
Q 037368 146 LLIAIGLDNG--CIYCIKGDIARERITRFKLQ----VDNQCSVMGLGFRVDGQALQLFAVTP-NSVILFSLQNQPPKRQF 218 (823)
Q Consensus 146 ~~ia~G~~dG--~V~l~~~~~~~~~~~k~~~~----~~~~~~It~l~fs~dg~~~~l~~~t~-~~V~~~d~~~~~~~~~~ 218 (823)
+.++..++ .|..++.. .+.....+ ......+.++++++++. .|+++.. +.|+.|+..+.. ...
T Consensus 185 --l~~~d~~~~~~I~~~d~~----~~~~~~~~g~~~~~~~~~p~~iav~p~~g--~lyv~d~~~~I~~~d~~~~~--~~~ 254 (409)
T 3hrp_A 185 --VYSIGWEGTHTVYVYMKA----SGWAPTRIGQLGSTFSGKIGAVALDETEE--WLYFVDSNKNFGRFNVKTQE--VTL 254 (409)
T ss_dssp --EEEEBSSTTCEEEEEEGG----GTTCEEEEEECCTTSCSCCCBCEECTTSS--EEEEECTTCEEEEEETTTCC--EEE
T ss_pred --EEEEecCCCceEEEEEcC----CCceeEEeeeccchhcCCcEEEEEeCCCC--eEEEEECCCcEEEEECCCCC--EEE
Confidence 88877655 67777643 12222222 11345678999999432 4555544 459999987542 222
Q ss_pred E-----cc-CCCccc-eecccC-CCeEEEee--CCeEEEEecCCCCcccccc----------------CCeEEEEeeCc-
Q 037368 219 L-----DN-IGCSTN-SVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAFE----------------GEKKLLGWFRG- 271 (823)
Q Consensus 219 l-----~~-~~~~~~-~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~~----------------g~~~~i~~~~~- 271 (823)
+ .. .+..+. .++|+| ++.+.++. .+.|+.|+.+|....+.-. ..+..+++..+
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 2 11 122223 788998 57777653 3589999887642111000 12556666532
Q ss_pred EEEEEEecCCCCccEEEEEeCCCCEEE-Eecc---------------ccceeEE-EeecCcEEEEEcCC-eEEEE
Q 037368 272 YLLCVIADQRNSKNIFNVYDLKNRLIA-HSLV---------------VKEVSHM-LCEWGNIILVMTDK-SVLCI 328 (823)
Q Consensus 272 ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~~---------------i~~v~~v-~~~~~~~~vvs~~~-~v~~l 328 (823)
.+.++... ..+.|+.||+.++.+. .... +.....+ +.+.+.+||....+ .|.++
T Consensus 335 ~lyvad~~---~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 335 NFYIVDGF---KGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp CEEEEETT---TTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CEEEEeCC---CCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 23333210 2478999996554432 2211 2234444 55567788776543 45554
No 220
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.0023 Score=69.31 Aligned_cols=258 Identities=13% Similarity=0.135 Sum_probs=135.9
Q ss_pred EEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCC
Q 037368 29 TCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEP 107 (823)
Q Consensus 29 s~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~ 107 (823)
+..+..++.+++|+.+|.|..+| .+|+.+..+...........+. +..++.++.|+. |..+|.....
T Consensus 97 ~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~---------l~~~d~~tG~- 164 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQ---------LQALNEADGA- 164 (376)
T ss_dssp EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSE---------EEEEETTTCC-
T ss_pred cCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCe---------EEEEECCCCc-
Confidence 44455678999999999999999 6788876665443222222222 346777777876 8899986421
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC------
Q 037368 108 EGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS------ 181 (823)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~------ 181 (823)
.+-...............+.++.. .. +.+|+.+|.|..++.. .+ +..-......+
T Consensus 165 ---------~~W~~~~~~~~~~~~~~~~~~~~~--~~---v~~g~~~g~l~~~d~~----tG-~~~w~~~~~~~~~~~~~ 225 (376)
T 3q7m_A 165 ---------VKWTVNLDMPSLSLRGESAPTTAF--GA---AVVGGDNGRVSAVLME----QG-QMIWQQRISQATGSTEI 225 (376)
T ss_dssp ---------EEEEEECCC-----CCCCCCEEET--TE---EEECCTTTEEEEEETT----TC-CEEEEEECCC-------
T ss_pred ---------EEEEEeCCCCceeecCCCCcEEEC--CE---EEEEcCCCEEEEEECC----CC-cEEEEEecccCCCCccc
Confidence 222222110000000012223332 35 7788889999988752 11 11111111100
Q ss_pred -----cceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEee-CCeEEEEecCCCC
Q 037368 182 -----VMGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGR-PEAVYFYEVDGRG 254 (823)
Q Consensus 182 -----It~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~g~~ 254 (823)
+.+.-.-.++ .+++++ ++.+..+|..+.. ..-... .+. ..+... .++.+.++. ++.++.++.....
T Consensus 226 ~~~~~~~~~p~~~~~---~v~~~~~~g~l~~~d~~tG~-~~w~~~-~~~-~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 226 DRLSDVDTTPVVVNG---VVFALAYNGNLTALDLRSGQ-IMWKRE-LGS-VNDFIV-DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp ----CCCCCCEEETT---EEEEECTTSCEEEEETTTCC-EEEEEC-CCC-EEEEEE-ETTEEEEEETTCCEEEEETTTCC
T ss_pred ccccccCCCcEEECC---EEEEEecCcEEEEEECCCCc-EEeecc-CCC-CCCceE-ECCEEEEEcCCCeEEEEECCCCc
Confidence 1111111233 456655 5679999986432 111111 111 122222 356666554 4588889875322
Q ss_pred cccccc---CC-eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEecccc-c-e-eEEEeecCcEEEEEcCCeEEE
Q 037368 255 PCWAFE---GE-KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVK-E-V-SHMLCEWGNIILVMTDKSVLC 327 (823)
Q Consensus 255 ~~~~~~---g~-~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~-~-v-~~v~~~~~~~~vvs~~~~v~~ 327 (823)
..+..+ .. .......+.+|.+.+ .++.|.++|..++.+.+...+. . + .......+.+|+.+.+|.++.
T Consensus 299 ~~w~~~~~~~~~~~~~~~~~~~l~v~~-----~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~ 373 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVLYNGNLVVGD-----SEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYS 373 (376)
T ss_dssp EEEEECTTTTSCCCCCEEETTEEEEEC-----TTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEE
T ss_pred EEEeecccCCCcccCCEEECCEEEEEe-----CCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEE
Confidence 222222 11 112233567777776 3579999999887766554442 1 1 112334677888888888887
Q ss_pred Ee
Q 037368 328 IG 329 (823)
Q Consensus 328 l~ 329 (823)
+.
T Consensus 374 ~~ 375 (376)
T 3q7m_A 374 IT 375 (376)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.94 E-value=0.009 Score=64.88 Aligned_cols=261 Identities=5% Similarity=-0.105 Sum_probs=135.9
Q ss_pred CCEEEEEec--CC---eEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEec----------CCCCcccccceeEE
Q 037368 35 RGKVVIGCD--DG---AVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGE----------DEQVSAQQSAVCLK 98 (823)
Q Consensus 35 ~~~l~~gs~--dG---~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~----------D~~~~~~~~~~~vk 98 (823)
+..+++.+. .+ +|.+|| .+++.+.++..-..+ .+.++|+|++|..+.. +++ |.
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~---------v~ 100 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY---------VE 100 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCe---------EE
Confidence 345555542 22 889999 678887777654444 9999999999887752 444 89
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCC--CCceEEEEEecCCCCcceEEEEEe--CCeEEEEEcccccccccceeE
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFP--EAKITSFLVLEEAPPILLIAIGLD--NGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~ 174 (823)
+||..+. ..+.++.+.....+ +.....++++|||+. +.++.. +++|.+++ .- +.....
T Consensus 101 viD~~t~----------~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~---l~v~n~~~~~~v~viD-~t----~~~~~~ 162 (373)
T 2mad_H 101 VFDPVTF----------LPIADIELPDAPRFDVGPYSWMNANTPNNAD---LLFFQFAAGPAVGLVV-QG----GSSDDQ 162 (373)
T ss_pred EEECCCC----------cEEEEEECCCccccccCCCccceEECCCCCE---EEEEecCCCCeEEEEE-CC----CCEEeE
Confidence 9998743 23455543200000 011468999999998 888764 47899987 51 111111
Q ss_pred EecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc-----cCCCcc-ceecccC-CCe-EEEeeCCeEE
Q 037368 175 QVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD-----NIGCST-NSVAMSD-RLE-LIIGRPEAVY 246 (823)
Q Consensus 175 ~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~-----~~~~~~-~~~~~s~-~~~-liv~~~~~I~ 246 (823)
+....+ ++.+.++++...+..+.++++..++. ... ...... ....++ ....+++ ++. ++++..+.+.
T Consensus 163 ~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~ 237 (373)
T 2mad_H 163 LLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG-AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKIL 237 (373)
T ss_pred EcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc-EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEE
Confidence 021111 24555666423333344566888887 322 111111 011111 1122333 334 3344456777
Q ss_pred EEecCCCCcc--cccc-------------CCe--EEEEeeCcEEEEEEecC-----CCCccEEEEEeCCCCEEEEecccc
Q 037368 247 FYEVDGRGPC--WAFE-------------GEK--KLLGWFRGYLLCVIADQ-----RNSKNIFNVYDLKNRLIAHSLVVK 304 (823)
Q Consensus 247 i~~~~g~~~~--~~~~-------------g~~--~~i~~~~~ylv~~s~d~-----~~~~~~I~I~D~~~~~i~~~~~i~ 304 (823)
+.+..+.... ..++ +.. ..+...+.++.+..... +...++|.++|..+..+.-+-.+.
T Consensus 238 vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g 317 (373)
T 2mad_H 238 QADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG 317 (373)
T ss_pred EEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC
Confidence 7777543211 0110 001 12333344444443211 012368999999887664443333
Q ss_pred c-eeEE-EeecCc-EEEEEc--CCeEEEEe
Q 037368 305 E-VSHM-LCEWGN-IILVMT--DKSVLCIG 329 (823)
Q Consensus 305 ~-v~~v-~~~~~~-~~vvs~--~~~v~~l~ 329 (823)
. ...+ ++++++ .++++. ++.|..+.
T Consensus 318 ~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 318 HDVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred CCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 2 3333 677777 555544 45555543
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.87 E-value=0.00087 Score=70.55 Aligned_cols=193 Identities=9% Similarity=0.028 Sum_probs=111.5
Q ss_pred eEEEee-CCCEEEEEecC-CeEEEEcCCCeeeEeEeec-c----cceeEEEEecCCCEEEE----EecC---CCCccc-c
Q 037368 28 ITCCSS-GRGKVVIGCDD-GAVSLLDRGLKFNFGFQAH-S----SSVLFLQQLKQRNFLVT----VGED---EQVSAQ-Q 92 (823)
Q Consensus 28 is~~~~-~~~~l~~gs~d-G~i~~~d~~~~~~~~~~~H-~----~~V~~i~~~~~~~~l~s----~s~D---~~~~~~-~ 92 (823)
+++++. +++.++++++. +.|.+|+.+++.. .+..+ . ..++.++++|+|++.+| +..+ +....+ .
T Consensus 88 ~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHCEHGRRAITRSDADGQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred cceeeECCCCCEEEEECCCCEEEEECCCCCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 555555 35678777754 7899999766643 33222 1 35788999999999987 2211 000000 0
Q ss_pred cceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC------CeEEEEEccccc
Q 037368 93 SAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN------GCIYCIKGDIAR 166 (823)
Q Consensus 93 ~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d------G~V~l~~~~~~~ 166 (823)
....|..||... +....+ .. . .. +..++|+||++. +.++... +.|..|+.+-
T Consensus 167 ~~~~v~~~d~~~--------g~~~~~--~~-~--~~----p~gl~~spdg~~---lyv~~~~~~~~~~~~i~~~~~~~-- 224 (305)
T 3dr2_A 167 AHHSVYRLPPDG--------SPLQRM--AD-L--DH----PNGLAFSPDEQT---LYVSQTPEQGHGSVEITAFAWRD-- 224 (305)
T ss_dssp SCEEEEEECSSS--------CCCEEE--EE-E--SS----EEEEEECTTSSE---EEEEECCC---CCCEEEEEEEET--
T ss_pred CCCeEEEEcCCC--------CcEEEE--ec-C--CC----CcceEEcCCCCE---EEEEecCCcCCCCCEEEEEEecC--
Confidence 000155555532 122111 11 1 12 688999999987 7666554 6788886431
Q ss_pred ccccceeEEec-CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEeeCCe
Q 037368 167 ERITRFKLQVD-NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIGRPEA 244 (823)
Q Consensus 167 ~~~~k~~~~~~-~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~~~~~ 244 (823)
......+.+.. ..+...++.+.++| . |++++.++|.+|+.+++ ....+.... .+.+++|+|++. +.++..+.
T Consensus 225 ~~l~~~~~~~~~~~~~pdgi~~d~~G--~-lwv~~~~gv~~~~~~g~--~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 225 GALHDRRHFASVPDGLPDGFCVDRGG--W-LWSSSGTGVCVFDSDGQ--LLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp TEEEEEEEEECCSSSCCCSEEECTTS--C-EEECCSSEEEEECTTSC--EEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred CCccCCeEEEECCCCCCCeEEECCCC--C-EEEecCCcEEEECCCCC--EEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 00011122222 24456789999988 3 77777788999998653 333443222 466778888764 66676677
Q ss_pred EEEEe
Q 037368 245 VYFYE 249 (823)
Q Consensus 245 I~i~~ 249 (823)
++.++
T Consensus 299 l~~~~ 303 (305)
T 3dr2_A 299 LWMLP 303 (305)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 223
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.80 E-value=0.0077 Score=61.72 Aligned_cols=222 Identities=10% Similarity=-0.054 Sum_probs=130.7
Q ss_pred CEEEEEecCCeEEEEcCCCeeeE------eEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCC
Q 037368 36 GKVVIGCDDGAVSLLDRGLKFNF------GFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d~~~~~~~------~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
.+|++++. +.|+.++.+++..+ .+......+..++++++++.| ++-..++. |.+++++...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~---------I~~~~~~g~~-- 69 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPS---------IGRASLHGGE-- 69 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTE---------EEEEESSSCC--
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCE---------EEEEecCCCC--
Confidence 35666654 57888884443221 223234567899999865554 55544554 8889987421
Q ss_pred CCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcceEEE
Q 037368 109 GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGF 187 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~f 187 (823)
. ..+. .. .. ..+..++++|++.. ..++-..++.|..++.+ +...+.+.. .-..-.++++
T Consensus 70 --------~-~~~~-~~-~~--~~p~~ia~d~~~~~--lyv~d~~~~~I~~~~~~-----g~~~~~~~~~~~~~P~~i~v 129 (267)
T 1npe_A 70 --------P-TTII-RQ-DL--GSPEGIALDHLGRT--IFWTDSQLDRIEVAKMD-----GTQRRVLFDTGLVNPRGIVT 129 (267)
T ss_dssp --------C-EEEE-CT-TC--CCEEEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECSSCSSEEEEEE
T ss_pred --------c-EEEE-EC-CC--CCccEEEEEecCCe--EEEEECCCCEEEEEEcC-----CCCEEEEEECCCCCccEEEE
Confidence 1 1211 11 10 23799999997554 04444556788888753 112223332 2234579999
Q ss_pred eecCCeEEEEEEcC----CeEEEEEecCCCCcceEEc-cCCCccceecccCC-CeEEEee--CCeEEEEecCCCCccccc
Q 037368 188 RVDGQALQLFAVTP----NSVILFSLQNQPPKRQFLD-NIGCSTNSVAMSDR-LELIIGR--PEAVYFYEVDGRGPCWAF 259 (823)
Q Consensus 188 s~dg~~~~l~~~t~----~~V~~~d~~~~~~~~~~l~-~~~~~~~~~~~s~~-~~liv~~--~~~I~i~~~~g~~~~~~~ 259 (823)
++++. .||++.. +.|..+++++.. ..++. .....++.++++++ +.+.++. .+.|..++.+|......+
T Consensus 130 d~~~g--~lyv~~~~~~~~~I~~~~~dg~~--~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 130 DPVRG--NLYWTDWNRDNPKIETSHMDGTN--RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp ETTTT--EEEEEECCSSSCEEEEEETTSCC--CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred eeCCC--EEEEEECCCCCcEEEEEecCCCC--cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe
Confidence 98652 5777753 368888887542 23332 22234567889886 4555553 368999998754322112
Q ss_pred c--CCeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEE
Q 037368 260 E--GEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLI 297 (823)
Q Consensus 260 ~--g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i 297 (823)
+ ..+..++.++.++.++.. ..+.|.++|..++.+
T Consensus 206 ~~~~~P~gi~~d~~~lyva~~----~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 206 EGLQYPFAVTSYGKNLYYTDW----KTNSVIAMDLAISKE 241 (267)
T ss_dssp ECCCSEEEEEEETTEEEEEET----TTTEEEEEETTTTEE
T ss_pred cCCCCceEEEEeCCEEEEEEC----CCCeEEEEeCCCCCc
Confidence 2 246677888888777653 347899999986554
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.78 E-value=0.011 Score=63.99 Aligned_cols=251 Identities=10% Similarity=-0.022 Sum_probs=131.5
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEeec---------ccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAH---------SSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H---------~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.++.+++++.+|.|..+| .+|+.+.++... ...+...-.. ++..+..++.|+. |..+|..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~---------l~a~d~~ 121 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQ---------VYALNTS 121 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSE---------EEEEETT
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCE---------EEEEECC
Confidence 467899999999999999 578887666542 1223222222 3556777778886 9999987
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCc-
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSV- 182 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I- 182 (823)
+. . .+-...... .. ..+.++. + .. +.+|+.+|.|..++.. .+ +..-......++
T Consensus 122 tG--------~--~~W~~~~~~--~~---~~~p~~~-~-~~---v~v~~~~g~l~~~d~~----tG-~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 122 DG--------T--VAWQTKVAG--EA---LSRPVVS-D-GL---VLIHTSNGQLQALNEA----DG-AVKWTVNLDMPSL 176 (376)
T ss_dssp TC--------C--EEEEEECSS--CC---CSCCEEE-T-TE---EEEECTTSEEEEEETT----TC-CEEEEEECCC---
T ss_pred CC--------C--EEEEEeCCC--ce---EcCCEEE-C-CE---EEEEcCCCeEEEEECC----CC-cEEEEEeCCCCce
Confidence 42 2 222222211 11 1112233 2 36 7888889999999852 11 111111222222
Q ss_pred -----ceEEEeecCCeEEEEEEc-CCeEEEEEecCCCCcceEEccC---CC----ccceeccc---CCCeEEEee-CCeE
Q 037368 183 -----MGLGFRVDGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNI---GC----STNSVAMS---DRLELIIGR-PEAV 245 (823)
Q Consensus 183 -----t~l~fs~dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~---~~----~~~~~~~s---~~~~liv~~-~~~I 245 (823)
...... ++ .+++++ ++.+..+|..+.. ..-..... +. .+..+..+ .++.+.++. ++.+
T Consensus 177 ~~~~~~~~~~~-~~---~v~~g~~~g~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 177 SLRGESAPTTA-FG---AAVVGGDNGRVSAVLMEQGQ-MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp --CCCCCCEEE-TT---EEEECCTTTEEEEEETTTCC-EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred eecCCCCcEEE-CC---EEEEEcCCCEEEEEECCCCc-EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 122222 33 455555 4569999976432 11111110 00 00001111 256666654 5688
Q ss_pred EEEecCCCCccccccC-CeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEecc-ccc--eeEEEeecCcEEEEEc
Q 037368 246 YFYEVDGRGPCWAFEG-EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLV-VKE--VSHMLCEWGNIILVMT 321 (823)
Q Consensus 246 ~i~~~~g~~~~~~~~g-~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~-i~~--v~~v~~~~~~~~vvs~ 321 (823)
+.++.......+..+. ....+...+..+.+.+. ++.|..+|..++.+.+... ... ........+.+|+.+.
T Consensus 252 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~~~-----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~ 326 (376)
T 3q7m_A 252 TALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQ-----NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDS 326 (376)
T ss_dssp EEEETTTCCEEEEECCCCEEEEEEETTEEEEEET-----TCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECT
T ss_pred EEEECCCCcEEeeccCCCCCCceEECCEEEEEcC-----CCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeC
Confidence 8998752222232221 22344456777777763 4789999998877666443 211 1112223455666666
Q ss_pred CCeEEEEe
Q 037368 322 DKSVLCIG 329 (823)
Q Consensus 322 ~~~v~~l~ 329 (823)
++.++.+.
T Consensus 327 ~g~l~~~d 334 (376)
T 3q7m_A 327 EGYLHWIN 334 (376)
T ss_dssp TSEEEEEE
T ss_pred CCeEEEEE
Confidence 66666665
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.78 E-value=0.013 Score=64.53 Aligned_cols=260 Identities=7% Similarity=0.011 Sum_probs=136.7
Q ss_pred CEEEEEec-C----CeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEe----------cCCCCcccccceeEEE
Q 037368 36 GKVVIGCD-D----GAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVG----------EDEQVSAQQSAVCLKV 99 (823)
Q Consensus 36 ~~l~~gs~-d----G~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s----------~D~~~~~~~~~~~vkv 99 (823)
..+++... + +.|.++| .+++.+.++..-..+ .|.++|+|+.|..+. .+++ |.+
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~---------Vsv 153 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDY---------VEV 153 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE---------EEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCE---------EEE
Confidence 45555443 2 7999999 788988888754455 899999999886664 2444 999
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCC--CCCceEEEEEecCCCCcceEEEEEe--CCeEEEEEcccccccccceeEE
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQF--PEAKITSFLVLEEAPPILLIAIGLD--NGCIYCIKGDIARERITRFKLQ 175 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~~ 175 (823)
+|..+. ..++++.+.+... .+.....++|+||++. +.++.. +++|.++|..- ......+
T Consensus 154 iD~~t~----------~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~---lyV~n~~~~~~VsVID~~t----~kvv~~I 216 (426)
T 3c75_H 154 FDPVTF----------LPIADIELPDAPRFLVGTYQWMNALTPDNKN---LLFYQFSPAPAVGVVDLEG----KTFDRML 216 (426)
T ss_dssp ECTTTC----------CEEEEEEETTCCCCCBSCCGGGSEECTTSSE---EEEEECSSSCEEEEEETTT----TEEEEEE
T ss_pred EECCCC----------cEEEEEECCCccccccCCCcceEEEcCCCCE---EEEEecCCCCeEEEEECCC----CeEEEEE
Confidence 999853 2566666531000 0012467899999998 887753 57899998631 1111111
Q ss_pred ecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcc----eEEccCCCcc-ceecccCCCe-EE-EeeCCeEEEE
Q 037368 176 VDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKR----QFLDNIGCST-NSVAMSDRLE-LI-IGRPEAVYFY 248 (823)
Q Consensus 176 ~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~----~~l~~~~~~~-~~~~~s~~~~-li-v~~~~~I~i~ 248 (823)
. -.+ +....|+|+..++..+.++++...+... +... ..++-...++ ....+++++. ++ +...+.|++.
T Consensus 217 ~-v~g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~Vi 291 (426)
T 3c75_H 217 D-VPD---CYHIFPASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQA 291 (426)
T ss_dssp E-CCS---EEEEEEEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEE
T ss_pred E-cCC---ceeeccCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEE
Confidence 1 111 1223344322233333444555555522 1111 1111111111 1233466553 33 3445678888
Q ss_pred ecCCCCcc----ccc-----------cC--CeEEEEeeCcEEEEEEecC-----CCCccEEEEEeCCCCEEEEeccccc-
Q 037368 249 EVDGRGPC----WAF-----------EG--EKKLLGWFRGYLLCVIADQ-----RNSKNIFNVYDLKNRLIAHSLVVKE- 305 (823)
Q Consensus 249 ~~~g~~~~----~~~-----------~g--~~~~i~~~~~ylv~~s~d~-----~~~~~~I~I~D~~~~~i~~~~~i~~- 305 (823)
+..+.... +.+ .+ ....+...+.++.+..... +...++|.++|..+..+.-+-.+..
T Consensus 292 D~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~ 371 (426)
T 3c75_H 292 DLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE 371 (426)
T ss_dssp EECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred eccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC
Confidence 87543211 110 01 1234445556555543211 0124689999998876554444333
Q ss_pred eeEE-EeecCc-EEEEEc--CCeEEEE
Q 037368 306 VSHM-LCEWGN-IILVMT--DKSVLCI 328 (823)
Q Consensus 306 v~~v-~~~~~~-~~vvs~--~~~v~~l 328 (823)
...+ ++++++ .++++. ++.|..+
T Consensus 372 P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 372 IDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred cCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 3333 667776 444443 4555544
No 226
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.77 E-value=0.0022 Score=73.75 Aligned_cols=189 Identities=11% Similarity=0.057 Sum_probs=115.7
Q ss_pred cCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe
Q 037368 74 KQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD 153 (823)
Q Consensus 74 ~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~ 153 (823)
+.+.++++.+.+++ |.+||..+. ..+.++... ..+..++|+||++. +.+++.
T Consensus 165 ~~~~~~V~~~~~~~---------V~viD~~t~----------~v~~~i~~g------~~p~~v~~SpDGr~---lyv~~~ 216 (567)
T 1qks_A 165 LENLFSVTLRDAGQ---------IALIDGSTY----------EIKTVLDTG------YAVHISRLSASGRY---LFVIGR 216 (567)
T ss_dssp GGGEEEEEETTTTE---------EEEEETTTC----------CEEEEEECS------SCEEEEEECTTSCE---EEEEET
T ss_pred CCceEEEEeCCCCe---------EEEEECCCC----------eEEEEEeCC------CCccceEECCCCCE---EEEEcC
Confidence 45556778888887 999999843 356666532 12789999999999 888999
Q ss_pred CCeEEEEEcccccccccceeEEecCCCCcceEEEe----ecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCC----
Q 037368 154 NGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFR----VDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIG---- 223 (823)
Q Consensus 154 dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs----~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~---- 223 (823)
+|.|.+|+..- ........+..+. ...+++|+ |||+ .+++++ .++|.++|..+.. +..++.-.+
T Consensus 217 dg~V~viD~~~--~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk--~l~v~n~~~~~v~ViD~~t~~-~~~~i~~~~~~~~ 290 (567)
T 1qks_A 217 DGKVNMIDLWM--KEPTTVAEIKIGS-EARSIETSKMEGWEDK--YAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYD 290 (567)
T ss_dssp TSEEEEEETTS--SSCCEEEEEECCS-EEEEEEECCSTTCTTT--EEEEEEEETTEEEEEETTTCC-EEEEEECCEECTT
T ss_pred CCeEEEEECCC--CCCcEeEEEecCC-CCceeEEccccCCCCC--EEEEEEccCCeEEEEECCCCc-EEEEEeccccccc
Confidence 99999998620 0111112222233 35799999 6995 566665 4679999976533 333332111
Q ss_pred -------CccceecccCCC-eEEEee--CCeEEEEecCCCCcc--cccc-C-CeE--EEEeeCcEEEEEEecCCCCccEE
Q 037368 224 -------CSTNSVAMSDRL-ELIIGR--PEAVYFYEVDGRGPC--WAFE-G-EKK--LLGWFRGYLLCVIADQRNSKNIF 287 (823)
Q Consensus 224 -------~~~~~~~~s~~~-~liv~~--~~~I~i~~~~g~~~~--~~~~-g-~~~--~i~~~~~ylv~~s~d~~~~~~~I 287 (823)
..+..+..++++ .+++.. ++.|.+++....... ..++ + ... .+.+++.|+++... .+.+|
T Consensus 291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~----~sn~V 366 (567)
T 1qks_A 291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN----ARNKL 366 (567)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG----GGTEE
T ss_pred cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC----CCCeE
Confidence 123345566654 344432 357888876532111 1111 1 122 34456788887764 35789
Q ss_pred EEEeCCCCEEEEe
Q 037368 288 NVYDLKNRLIAHS 300 (823)
Q Consensus 288 ~I~D~~~~~i~~~ 300 (823)
.++|..++.+...
T Consensus 367 ~ViD~~t~kl~~~ 379 (567)
T 1qks_A 367 VVIDTKEGKLVAI 379 (567)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999998765443
No 227
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.76 E-value=0.02 Score=68.80 Aligned_cols=266 Identities=13% Similarity=0.148 Sum_probs=153.8
Q ss_pred CCCeEEEeeC-CCEEEEEecCCeEEEEcCCCeeeEeEee-------cccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 25 SGNITCCSSG-RGKVVIGCDDGAVSLLDRGLKFNFGFQA-------HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 25 ~~~is~~~~~-~~~l~~gs~dG~i~~~d~~~~~~~~~~~-------H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
...|.+++.. ++.|.+||.+|-|..|+........+.. ....|.+|..+++|++-+ ++.++.
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~G--------- 378 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGG--------- 378 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSC---------
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCC---------
Confidence 3458777764 5789999998889999844332323332 134699999998888665 455543
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEecc---C-CCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccce
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFT---S-QFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRF 172 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~---~-~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~ 172 (823)
|..|+..... . ..+.... . ..+...|.+++.++++.. +-+|+.++.|..++.. ..+.
T Consensus 379 l~~~~~~~~~----------~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~---lWigt~~~Gl~~~d~~-----~~~~ 439 (795)
T 4a2l_A 379 LNLYNPITQR----------F-TSYTLQEDESARGIGSNNIKAVYVDEKKSL---VYIGTHAGGLSILHRN-----SGQV 439 (795)
T ss_dssp EEEECTTTCC----------E-EEECCC------CCSCSCEEEEEEETTTTE---EEEEETTTEEEEEETT-----TCCE
T ss_pred eEEEcCCCCc----------E-EEEecCCCCcccCCCCccEEEEEEcCCCCE---EEEEeCcCceeEEeCC-----CCcE
Confidence 8889876321 1 1111000 0 011234999999999985 6778877788888753 1122
Q ss_pred eEEec-----CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEcc-------CCCccceecccCCCeEEEe
Q 037368 173 KLQVD-----NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDN-------IGCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 173 ~~~~~-----~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~-------~~~~~~~~~~s~~~~liv~ 240 (823)
..+.. ....|.++...++| .|++++.+++..|+..++. . ..+.. ....+.++..+++|.+.+|
T Consensus 440 ~~~~~~~~~l~~~~v~~i~~d~~g---~lwigt~~Gl~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 440 ENFNQRNSQLVNENVYAILPDGEG---NLWLGTLSALVRFNPEQRS-F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp EEECTTTSCCSCSCEEEEEECSSS---CEEEEESSCEEEEETTTTE-E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred EEeecCCCCcCCCeeEEEEECCCC---CEEEEecCceeEEeCCCCe-E-EEccccccccccCCceEEEEEECCCCCEEEE
Confidence 22211 13568888877766 3666766889999976432 1 11111 1234667777889998888
Q ss_pred eCCeEEEEecCCCCcccc-------cc-CCeEEEEeeC-cEEEEEEecCCCCccEEEEEeCCCCEEE-Eec--cccc--e
Q 037368 241 RPEAVYFYEVDGRGPCWA-------FE-GEKKLLGWFR-GYLLCVIADQRNSKNIFNVYDLKNRLIA-HSL--VVKE--V 306 (823)
Q Consensus 241 ~~~~I~i~~~~g~~~~~~-------~~-g~~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~--~i~~--v 306 (823)
..+++..|+..+....+. +. .....+..+. ..+-+++. +-|..||..++... +.. .++. +
T Consensus 515 t~~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------~Gl~~~d~~~~~~~~~~~~~gl~~~~i 588 (795)
T 4a2l_A 515 GEEGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGTR------EGFYCFNEKDKQIKRYNTTNGLPNNVV 588 (795)
T ss_dssp ESSCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEES------SCEEEEETTTTEEEEECGGGTCSCSCE
T ss_pred eCCceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEeC------CCceeECCCCCcEEEeCCCCCCchhhe
Confidence 778899998764321110 11 1123343322 23333332 24788888766433 332 2322 4
Q ss_pred eEEEe-ecCcEEEEEcCCeEEEEeec
Q 037368 307 SHMLC-EWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 307 ~~v~~-~~~~~~vvs~~~~v~~l~~~ 331 (823)
..+.. ..|.+++.+ .+.+.++.+.
T Consensus 589 ~~i~~d~~g~lWi~t-~~Gl~~~~~~ 613 (795)
T 4a2l_A 589 YGILEDSFGRLWLST-NRGISCFNPE 613 (795)
T ss_dssp EEEEECTTSCEEEEE-TTEEEEEETT
T ss_pred EEEEECCCCCEEEEc-CCceEEEcCC
Confidence 44433 345565555 5668887643
No 228
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.73 E-value=0.0036 Score=65.49 Aligned_cols=186 Identities=9% Similarity=0.003 Sum_probs=108.4
Q ss_pred CCCeEEEeeC-CCEEEEEecCCeEEEEcC-CCeeeEeEeec-----ccceeEEEEecCCCEEEEEecCCCC----ccccc
Q 037368 25 SGNITCCSSG-RGKVVIGCDDGAVSLLDR-GLKFNFGFQAH-----SSSVLFLQQLKQRNFLVTVGEDEQV----SAQQS 93 (823)
Q Consensus 25 ~~~is~~~~~-~~~l~~gs~dG~i~~~d~-~~~~~~~~~~H-----~~~V~~i~~~~~~~~l~s~s~D~~~----~~~~~ 93 (823)
+..+.+++.. ++.+++++ ++.|.+||. +++.. .+..+ ...++.+.++|+|++.++...++.. ..+.
T Consensus 53 ~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~- 129 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAV-VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ- 129 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEE-EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC-
T ss_pred CCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEE-EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC-
Confidence 3457777664 56677776 567999994 45543 33322 2458999999999988765433210 0011
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceE-EEEEeCCeEEEEEcccccccc--c
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI-AIGLDNGCIYCIKGDIARERI--T 170 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i-a~G~~dG~V~l~~~~~~~~~~--~ 170 (823)
-+||.++.. +. ........ .. ...++|+||++. + ++.+.++.|..|+.+. ..+ .
T Consensus 130 ---~~l~~~d~~-------g~--~~~~~~~~--~~----pngi~~spdg~~---lyv~~~~~~~i~~~~~d~--~~G~~~ 186 (297)
T 3g4e_A 130 ---GALYSLFPD-------HH--VKKYFDQV--DI----SNGLDWSLDHKI---FYYIDSLSYSVDAFDYDL--QTGQIS 186 (297)
T ss_dssp ---EEEEEECTT-------SC--EEEEEEEE--SB----EEEEEECTTSCE---EEEEEGGGTEEEEEEECT--TTCCEE
T ss_pred ---cEEEEEECC-------CC--EEEEeecc--cc----ccceEEcCCCCE---EEEecCCCCcEEEEeccC--CCCccc
Confidence 567766531 11 22122211 12 689999999975 5 5566678999987531 011 1
Q ss_pred ceeEEec---CCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCCCccceeccc-CCCe-EEEe
Q 037368 171 RFKLQVD---NQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMS-DRLE-LIIG 240 (823)
Q Consensus 171 k~~~~~~---~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s-~~~~-liv~ 240 (823)
..+.+.. ..+...++++.++|+ |++++ .++|..|+..+. .....+......+.|++|. |++. +.++
T Consensus 187 ~~~~~~~~~~~~~~p~g~~~d~~G~---lwva~~~~~~v~~~d~~tG-~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 187 NRRSVYKLEKEEQIPDGMCIDAEGK---LWVACYNGGRVIRLDPVTG-KRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEEEECCGGGCEEEEEEEBTTSC---EEEEEETTTEEEEECTTTC-CEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred CcEEEEECCCCCCCCCeeEECCCCC---EEEEEcCCCEEEEEcCCCc-eEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 1122322 235678999999883 55554 356999998632 2444454444567888997 6654 4443
No 229
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.69 E-value=0.005 Score=65.15 Aligned_cols=225 Identities=8% Similarity=-0.007 Sum_probs=123.3
Q ss_pred CEEEEEecCCeEEEEcCCCeeeEeEee--------------------cccceeEEEEec-CCCEEEEEecCCCCcccccc
Q 037368 36 GKVVIGCDDGAVSLLDRGLKFNFGFQA--------------------HSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSA 94 (823)
Q Consensus 36 ~~l~~gs~dG~i~~~d~~~~~~~~~~~--------------------H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~ 94 (823)
..+++++.+|.|..|+..+.....|.. ..+.+..|++++ +|+++++... +.
T Consensus 31 ~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-~~------- 102 (322)
T 2fp8_A 31 KGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-YH------- 102 (322)
T ss_dssp SSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-TE-------
T ss_pred CEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-CC-------
Confidence 348899999999999955433334542 113578999997 6666655443 32
Q ss_pred eeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEe-----------------CCe
Q 037368 95 VCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLD-----------------NGC 156 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~-----------------dG~ 156 (823)
|..+|.... .+..+.......+...+..+++++ +++. .++-.. +|.
T Consensus 103 --i~~~d~~~g-----------~~~~~~~~~~~~~~~~p~~i~~d~~~G~l---~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 103 --LSVVGSEGG-----------HATQLATSVDGVPFKWLYAVTVDQRTGIV---YFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp --EEEECTTCE-----------ECEEEESEETTEECSCEEEEEECTTTCCE---EEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred --EEEEeCCCC-----------EEEEecccCCCCcccccceEEEecCCCEE---EEECCcccccccccceehcccCCCce
Confidence 777776521 111221000000102268899999 8865 554322 256
Q ss_pred EEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCC-CcceEEccCCCccceecccC
Q 037368 157 IYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQP-PKRQFLDNIGCSTNSVAMSD 233 (823)
Q Consensus 157 V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~-~~~~~l~~~~~~~~~~~~s~ 233 (823)
|..++.+ ..+...+...-....+|+|+++|+ .|+++. .++|..|++.+.. .....+..... +..+++++
T Consensus 167 v~~~d~~-----~~~~~~~~~~~~~p~gia~~~dg~--~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~ 238 (322)
T 2fp8_A 167 LIKYDPS-----TKETTLLLKELHVPGGAEVSADSS--FVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA 238 (322)
T ss_dssp EEEEETT-----TTEEEEEEEEESCCCEEEECTTSS--EEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred EEEEeCC-----CCEEEEeccCCccCcceEECCCCC--EEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence 7767642 112222222223356899999983 566663 3579999987532 11122221112 56678888
Q ss_pred CCeEEEee-C-----------CeEEEEecCCCCcc-cccc-C----CeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCC
Q 037368 234 RLELIIGR-P-----------EAVYFYEVDGRGPC-WAFE-G----EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 234 ~~~liv~~-~-----------~~I~i~~~~g~~~~-~~~~-g----~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
+|.+.++. . +.|..++.+|+... +..+ | .+..+...+..|.+.+. ..+.|.++++..+
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~----~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL----FHGSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS----SCSEEEEEEC---
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec----CCCceEEEecccc
Confidence 99877653 2 35777887654211 1111 1 13344455666666543 3467888887654
Q ss_pred E
Q 037368 296 L 296 (823)
Q Consensus 296 ~ 296 (823)
.
T Consensus 315 ~ 315 (322)
T 2fp8_A 315 G 315 (322)
T ss_dssp -
T ss_pred c
Confidence 4
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.66 E-value=0.0013 Score=69.57 Aligned_cols=178 Identities=12% Similarity=0.095 Sum_probs=111.0
Q ss_pred CCCEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSST 113 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~ 113 (823)
.++.+++|+.+|.|..+|..++....+..+...+..+...++|.+.+ ++.++. |..+|.. ..
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~---------l~~~d~~-g~------- 167 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNY---------LYAINPD-GT------- 167 (330)
T ss_dssp ETTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSE---------EEEECTT-SC-------
T ss_pred ECCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCE---------EEEECCC-CC-------
Confidence 38889999999999999966777666666666677788877777554 566665 8888876 21
Q ss_pred CCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCe
Q 037368 114 SPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQA 193 (823)
Q Consensus 114 ~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~ 193 (823)
.+...... . ..+.++++++++. +.+|+ |.|..++.+ +............|.++...++|
T Consensus 168 ---~~~~~~~~--~---~~~~~~~~d~~g~----l~v~t--~~l~~~d~~-----g~~~~~~~~~~~~~~~~~~~~~g-- 226 (330)
T 3hxj_A 168 ---EKWRFKTN--D---AITSAASIGKDGT----IYFGS--DKVYAINPD-----GTEKWNFYAGYWTVTRPAISEDG-- 226 (330)
T ss_dssp ---EEEEEECS--S---CCCSCCEECTTCC----EEEES--SSEEEECTT-----SCEEEEECCSSCCCSCCEECTTS--
T ss_pred ---EeEEEecC--C---CceeeeEEcCCCE----EEEEe--CEEEEECCC-----CcEEEEEccCCcceeceEECCCC--
Confidence 22232221 1 2267777877765 55555 778878621 11111112234568888888777
Q ss_pred EEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEeeCC-eEEEEecCCC
Q 037368 194 LQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPE-AVYFYEVDGR 253 (823)
Q Consensus 194 ~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~~~-~I~i~~~~g~ 253 (823)
.+++++ ++++..++.+++ ....+...+..+.++...++|.+.++..+ .|+.++.+|+
T Consensus 227 -~l~v~t~~~gl~~~~~~g~--~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~ 285 (330)
T 3hxj_A 227 -TIYVTSLDGHLYAINPDGT--EKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGT 285 (330)
T ss_dssp -CEEEEETTTEEEEECTTSC--EEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSC
T ss_pred -eEEEEcCCCeEEEECCCCC--EeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCc
Confidence 355565 578888865432 22223222222334455668888887765 8999987543
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.62 E-value=0.0028 Score=69.45 Aligned_cols=179 Identities=11% Similarity=0.025 Sum_probs=107.3
Q ss_pred EeeCCCEEEEEecC------CeEEEEc-CCCeeeEeEeecccc---eeEEEEecCCCEEEEEe-----------------
Q 037368 31 CSSGRGKVVIGCDD------GAVSLLD-RGLKFNFGFQAHSSS---VLFLQQLKQRNFLVTVG----------------- 83 (823)
Q Consensus 31 ~~~~~~~l~~gs~d------G~i~~~d-~~~~~~~~~~~H~~~---V~~i~~~~~~~~l~s~s----------------- 83 (823)
.|.+++.++++..+ |.|.++| .+++++.++..-.++ -..+.++|+++.++|..
T Consensus 144 ~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 144 HCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp EECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred eECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 34455655544444 7899999 678999888733222 33577899999988874
Q ss_pred --cCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE--ecCCCCcceEEEEE------e
Q 037368 84 --EDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV--LEEAPPILLIAIGL------D 153 (823)
Q Consensus 84 --~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~--~~d~~~~~~ia~G~------~ 153 (823)
.+++ |.+||+.+. ..++++.+.. ++....-++| +|+++. +.++. .
T Consensus 224 ~~~~d~---------V~v~D~~~~----------k~~~tI~vg~---~g~~P~~i~f~~~Pdg~~---aYV~~e~~~~~L 278 (462)
T 2ece_A 224 DRYGNR---------IHFWDLRKR----------KRIHSLTLGE---ENRMALELRPLHDPTKLM---GFINMVVSLKDL 278 (462)
T ss_dssp HHSCCE---------EEEEETTTT----------EEEEEEESCT---TEEEEEEEEECSSTTCCE---EEEEEEEETTTC
T ss_pred hccCCE---------EEEEECCCC----------cEeeEEecCC---CCCccceeEeeECCCCCE---EEEEEeeeccCC
Confidence 1333 999999842 3566666421 1111344444 999987 66665 4
Q ss_pred CCeEEEEEcccccccccc-eeEE-ecC-----------------CCCcceEEEeecCCeEEEEEEcC--CeEEEEEecCC
Q 037368 154 NGCIYCIKGDIARERITR-FKLQ-VDN-----------------QCSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQ 212 (823)
Q Consensus 154 dG~V~l~~~~~~~~~~~k-~~~~-~~~-----------------~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~ 212 (823)
+++|.+|.-+ +.... .+++ ... ....+.|.+|+|| ..|++++. +.|.+|++...
T Consensus 279 ss~V~v~~~d---~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG--rfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 279 SSSIWLWFYE---DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD--KFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CEEEEEEEEE---TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS--CEEEEEETTTTEEEEEECSST
T ss_pred CceEEEEEec---CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC--CEEEEEeCCCCEEEEEEecCC
Confidence 6788776532 00000 1111 000 2347899999999 47888874 56999998633
Q ss_pred CCc--ceEEccCC----------C----ccceecccCCCeEEE
Q 037368 213 PPK--RQFLDNIG----------C----STNSVAMSDRLELII 239 (823)
Q Consensus 213 ~~~--~~~l~~~~----------~----~~~~~~~s~~~~liv 239 (823)
..+ ...+.-.| . .+..+.++|||+++.
T Consensus 354 ~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~Ly 396 (462)
T 2ece_A 354 FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVY 396 (462)
T ss_dssp TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEE
T ss_pred CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEE
Confidence 222 11222111 1 356788888887553
No 232
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.59 E-value=0.0097 Score=64.49 Aligned_cols=217 Identities=9% Similarity=0.012 Sum_probs=115.2
Q ss_pred cCCeEEEEc-CCCeeeEeEeecc-------cceeEEEEecCCCEEEEEec--CCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 43 DDGAVSLLD-RGLKFNFGFQAHS-------SSVLFLQQLKQRNFLVTVGE--DEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 43 ~dG~i~~~d-~~~~~~~~~~~H~-------~~V~~i~~~~~~~~l~s~s~--D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
.++.|.+|| .+++.+.++..-. ..-..+.++|+|++|..+.. +++ |.|+|+.+.
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~---------VsVID~~t~------- 170 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA---------VGVVDLEGK------- 170 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE---------EEEEETTTT-------
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe---------EEEEECCCC-------
Confidence 467899999 7788887775321 24567999999999877653 455 999999853
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccccee----EEe-cCCCCcc-eEE
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFK----LQV-DNQCSVM-GLG 186 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~----~~~-~~~~~It-~l~ 186 (823)
..++++.+.. + ...+....+. +++.+.||++.+++.. ...+.. ..+ ....++. ...
T Consensus 171 ---~vv~tI~v~g-------~-~~~~P~g~~~---~~~~~~DG~~~~v~~~----~~g~v~~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 171 ---AFKRMLDVPD-------C-YHIFPTAPDT---FFMHCRDGSLAKVAFG----TEGTPEITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp ---EEEEEEECCS-------E-EEEEEEETTE---EEEEETTSCEEEEECC----SSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred ---cEEEEEECCC-------c-ceeecCCCce---eEEECCCCCEEEEECC----CCCeEEEeecceeccccccccccce
Confidence 3566665310 1 1112222223 4444556665555432 001110 011 1134443 256
Q ss_pred Ee-ecCCeEEEEEEcCCeEEEEEecCCCC-cceEE---cc----CCC---ccceecccCCCe-EEEee-----------C
Q 037368 187 FR-VDGQALQLFAVTPNSVILFSLQNQPP-KRQFL---DN----IGC---STNSVAMSDRLE-LIIGR-----------P 242 (823)
Q Consensus 187 fs-~dg~~~~l~~~t~~~V~~~d~~~~~~-~~~~l---~~----~~~---~~~~~~~s~~~~-liv~~-----------~ 242 (823)
|. ++| ..+|++..+.|++.|+.+... ....+ .. .|. ....+.+++++. +.++. +
T Consensus 233 ~~~~dG--~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 233 YSQKAG--RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp EETTTT--EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred eEcCCC--cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 74 566 467777777899999865421 11111 10 111 112345666554 44432 2
Q ss_pred CeEEEEecCCCCccc--cccCCeEE--EEeeCc-EEEEEEecCCCCccEEEEEeCCCCEEEE
Q 037368 243 EAVYFYEVDGRGPCW--AFEGEKKL--LGWFRG-YLLCVIADQRNSKNIFNVYDLKNRLIAH 299 (823)
Q Consensus 243 ~~I~i~~~~g~~~~~--~~~g~~~~--i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~~~i~~ 299 (823)
+.|.++|........ .+...... ++.++. +|++... .+++|.|+|..+..+.-
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~----~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST----GDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET----TTTEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC----CCCeEEEEECCCCcEEE
Confidence 467788876433221 22222333 344554 5554442 35899999998765443
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.59 E-value=0.057 Score=64.82 Aligned_cols=263 Identities=10% Similarity=0.087 Sum_probs=148.2
Q ss_pred CCCeEEEeeC-CCEEEEEecCCeEEEEcCCCeeeEeEee---------cccceeEEEEecCCCEEEEEecCCCCcccccc
Q 037368 25 SGNITCCSSG-RGKVVIGCDDGAVSLLDRGLKFNFGFQA---------HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSA 94 (823)
Q Consensus 25 ~~~is~~~~~-~~~l~~gs~dG~i~~~d~~~~~~~~~~~---------H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~ 94 (823)
...|.|++.. ++.|.+||.+|-|..|+........+.. ....|.+++.+++|+.|-.++.++.
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G------- 428 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG------- 428 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTE-------
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc-------
Confidence 4458888764 5789999999889999954333333431 1357999999988883444555443
Q ss_pred eeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeE
Q 037368 95 VCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKL 174 (823)
Q Consensus 95 ~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~ 174 (823)
|.+||..+. . ...+.......+...|.+++.++++. +-+|+. +.+.+|+.. ..+...
T Consensus 429 --l~~~d~~~~--------~---~~~~~~~~~~l~~~~v~~i~~d~~g~----lwigt~-~Gl~~~~~~-----~~~~~~ 485 (795)
T 4a2l_A 429 --LSILHRNSG--------Q---VENFNQRNSQLVNENVYAILPDGEGN----LWLGTL-SALVRFNPE-----QRSFTT 485 (795)
T ss_dssp --EEEEETTTC--------C---EEEECTTTSCCSCSCEEEEEECSSSC----EEEEES-SCEEEEETT-----TTEEEE
T ss_pred --eeEEeCCCC--------c---EEEeecCCCCcCCCeeEEEEECCCCC----EEEEec-CceeEEeCC-----CCeEEE
Confidence 888987632 1 11221101011223499999998875 455565 457777643 111111
Q ss_pred Eec-------CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc---c----CCCccceecccCCCeEEEe
Q 037368 175 QVD-------NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD---N----IGCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 175 ~~~-------~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~---~----~~~~~~~~~~s~~~~liv~ 240 (823)
+.. ....|.++...++| .+++++.+++..|+..+.. . .+. . ....+.++..+++|.+.+|
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g---~lWigt~~Gl~~~~~~~~~-~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWig 559 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHK---RLWIGGEEGLSVFKQEGLD-I--QKASILPVSNVTKLFTNCIYEASNGIIWVG 559 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTC---CEEEEESSCEEEEEEETTE-E--EECCCSCSCGGGGSCEEEEEECTTSCEEEE
T ss_pred ccccccccccCCceEEEEEECCCC---CEEEEeCCceEEEeCCCCe-E--EEecCCCCCCCCCCeeEEEEECCCCCEEEE
Confidence 111 13568888887777 3666666889999986532 2 221 0 1224567777789998888
Q ss_pred eCCeEEEEecCCCCc-ccc-ccC---C-eEEEEeeC-cEEEEEEecCCCCccEEEEEeCCCCEE-EEec--cccc--e--
Q 037368 241 RPEAVYFYEVDGRGP-CWA-FEG---E-KKLLGWFR-GYLLCVIADQRNSKNIFNVYDLKNRLI-AHSL--VVKE--V-- 306 (823)
Q Consensus 241 ~~~~I~i~~~~g~~~-~~~-~~g---~-~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D~~~~~i-~~~~--~i~~--v-- 306 (823)
..+++..|+..+... .+. ..| . ...+..+. ..+-+.+. .-|..||+.++.+ .+.. .++. .
T Consensus 560 T~~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~ 633 (795)
T 4a2l_A 560 TREGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN------RGISCFNPETEKFRNFTESDGLQSNQFNT 633 (795)
T ss_dssp ESSCEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET------TEEEEEETTTTEEEEECGGGTCSCSCEEE
T ss_pred eCCCceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC------CceEEEcCCCCcEEEcCCcCCCccccCcc
Confidence 777999998764311 111 111 1 22333332 23333332 3577788876544 3332 2222 1
Q ss_pred eEEE-eecCcEEEEEcCCeEEEEee
Q 037368 307 SHML-CEWGNIILVMTDKSVLCIGE 330 (823)
Q Consensus 307 ~~v~-~~~~~~~vvs~~~~v~~l~~ 330 (823)
..++ ...|.+|+-+.+ .+.++.+
T Consensus 634 ~~~~~~~~G~l~~g~~~-Gl~~~~p 657 (795)
T 4a2l_A 634 ASYCRTSVGQMYFGGIN-GITTFRP 657 (795)
T ss_dssp EEEEECTTSCEEEEETT-EEEEECG
T ss_pred CceeECCCCeEEEecCC-ceEEEcH
Confidence 1222 345556666554 4666654
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.58 E-value=0.0067 Score=71.79 Aligned_cols=240 Identities=10% Similarity=0.024 Sum_probs=127.4
Q ss_pred eEEEe-eCC-CEEEEEe-----cCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCC--------Cccc
Q 037368 28 ITCCS-SGR-GKVVIGC-----DDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQ--------VSAQ 91 (823)
Q Consensus 28 is~~~-~~~-~~l~~gs-----~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~--------~~~~ 91 (823)
+..++ +++ ++|+.+. .+.+|++|| .+++.+.. .-+......++|+ ||+.|+.++.|.. +.+.
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCc
Confidence 43334 344 4666432 335799999 66665422 1122224678899 9999998888853 2222
Q ss_pred ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCC-CCCCceEEEEEecCCCCcceEEEEEeC----CeEEEEEccccc
Q 037368 92 QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQ-FPEAKITSFLVLEEAPPILLIAIGLDN----GCIYCIKGDIAR 166 (823)
Q Consensus 92 ~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~v~~va~~~d~~~~~~ia~G~~d----G~V~l~~~~~~~ 166 (823)
. |.+|++.... ....+ ... ... .+ ....+++++||++. +++.... +.|.+++.+
T Consensus 209 ~----v~~~~lgt~~------~~~~~--v~~--~~~~~~-~~~~~~~~SpDg~~---l~~~~~~~~~~~~i~~~d~~--- 267 (693)
T 3iuj_A 209 K----VYFHRLGTAQ------EDDRL--VFG--AIPAQH-HRYVGATVTEDDRF---LLISAANSTSGNRLYVKDLS--- 267 (693)
T ss_dssp E----EEEEETTSCG------GGCEE--EES--CSGGGC-CSEEEEEECTTSCE---EEEEEESSSSCCEEEEEETT---
T ss_pred E----EEEEECCCCc------ccceE--EEe--cCCCCC-eEEEEEEEcCCCCE---EEEEEccCCCCcEEEEEECC---
Confidence 3 8999987421 01111 111 101 12 23678999999998 7666543 367777642
Q ss_pred ccccceeEEecCCCCcceEEEeecCCeEEEEEEcC----CeEEEEEecCCCC-cceEEccCCCccceecccCCCe-EEEe
Q 037368 167 ERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTP----NSVILFSLQNQPP-KRQFLDNIGCSTNSVAMSDRLE-LIIG 240 (823)
Q Consensus 167 ~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~----~~V~~~d~~~~~~-~~~~l~~~~~~~~~~~~s~~~~-liv~ 240 (823)
+.....+.+....+.+... |+++|. .+++.++. .+|+.+++.+... ..+.+..+...+. .|++++. ++++
T Consensus 268 ~~~~~~~~l~~~~~~~~~~-~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 268 QENAPLLTVQGDLDADVSL-VDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp STTCCCEEEECSSSSCEEE-EEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CCCCceEEEeCCCCceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 1111334444444445554 667664 45555553 3588999875331 1234433333332 7777665 4433
Q ss_pred -eCC---eEEEEecCCCCc-cccccCC--eEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCC
Q 037368 241 -RPE---AVYFYEVDGRGP-CWAFEGE--KKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNR 295 (823)
Q Consensus 241 -~~~---~I~i~~~~g~~~-~~~~~g~--~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~ 295 (823)
..+ .|++|+.+|... ...+++. ...+++ .++.++....+. ..-++|..||+.++
T Consensus 344 ~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~-~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENY-AQPPTLYRFEPKSG 406 (693)
T ss_dssp EEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECS-SSCCEEEEECTTTC
T ss_pred EEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCC-CCCCEEEEEECCCC
Confidence 333 688898875422 1223322 222222 334444443211 12368999998664
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.50 E-value=0.0081 Score=63.76 Aligned_cols=182 Identities=10% Similarity=0.019 Sum_probs=103.6
Q ss_pred CCeEEEee-CCCEEEEEecCCeEEEEc-CCCeeeEeEeec-----ccceeEEEEecCCCEEEEEecCCCCcccccceeEE
Q 037368 26 GNITCCSS-GRGKVVIGCDDGAVSLLD-RGLKFNFGFQAH-----SSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 26 ~~is~~~~-~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H-----~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
..+.+++. +++.+++++.+| |.+|| .+++.. .+... ...++.+.++|+|++.++...+.. .... ..
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-~~~~----~~ 162 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDDG-LFLRDTATGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA-ETGA----GS 162 (326)
T ss_dssp SCEEEEEEEETTEEEEEETTE-EEEEETTTCCEE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC-CTTC----EE
T ss_pred CcceEEEEeCCCeEEEEECCC-EEEEECCCCcEE-EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC-CCCc----eE
Confidence 35666664 567777777555 99999 455543 34322 246899999999998876543210 0000 45
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEE-EeCCeEEEEEcccccccc---cceeE
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIG-LDNGCIYCIKGDIARERI---TRFKL 174 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G-~~dG~V~l~~~~~~~~~~---~k~~~ 174 (823)
||.++.. . . ..+.. . . .....++|+||++. +.++ +.++.|.+|+.+. ..+ ...+.
T Consensus 163 l~~~~~g--------~--~-~~~~~-~-~---~~~~~i~~s~dg~~---lyv~~~~~~~I~~~d~~~--~~Gl~~~~~~~ 221 (326)
T 2ghs_A 163 IYHVAKG--------K--V-TKLFA-D-I---SIPNSICFSPDGTT---GYFVDTKVNRLMRVPLDA--RTGLPTGKAEV 221 (326)
T ss_dssp EEEEETT--------E--E-EEEEE-E-E---SSEEEEEECTTSCE---EEEEETTTCEEEEEEBCT--TTCCBSSCCEE
T ss_pred EEEEeCC--------c--E-EEeeC-C-C---cccCCeEEcCCCCE---EEEEECCCCEEEEEEccc--ccCCcccCceE
Confidence 5554411 1 1 11111 1 0 11688999999986 6544 4567898887431 011 11122
Q ss_pred Eec---CCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccCCCccceeccc-CCCe-EEEe
Q 037368 175 QVD---NQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMS-DRLE-LIIG 240 (823)
Q Consensus 175 ~~~---~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s-~~~~-liv~ 240 (823)
+.. ..+...++.+.++|. +++++ .++|..|+.+++ ....+......+.+++|+ |++. +.++
T Consensus 222 ~~~~~~~~~~p~gi~~d~~G~---lwva~~~~~~v~~~d~~g~--~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 222 FIDSTGIKGGMDGSVCDAEGH---IWNARWGEGAVDRYDTDGN--HIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp EEECTTSSSEEEEEEECTTSC---EEEEEETTTEEEEECTTCC--EEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred EEECCCCCCCCCeeEECCCCC---EEEEEeCCCEEEEECCCCC--EEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 221 234567899988883 55554 567999987432 334444344457788887 7654 4443
No 236
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.41 E-value=0.099 Score=62.57 Aligned_cols=266 Identities=12% Similarity=0.078 Sum_probs=149.2
Q ss_pred CCCeEEEeeC-CCEEEEEecCCeEEEEcCCCeeeEeEee----------cccceeEEEEecCCCEEEEEecCCCCccccc
Q 037368 25 SGNITCCSSG-RGKVVIGCDDGAVSLLDRGLKFNFGFQA----------HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQS 93 (823)
Q Consensus 25 ~~~is~~~~~-~~~l~~gs~dG~i~~~d~~~~~~~~~~~----------H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~ 93 (823)
...|.+++.. .+.|.+|+.+|-|..++........+.. ....|.+|..+++|++.+ ++.++.
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~~G------ 384 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI-GTDGGG------ 384 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEE-EEBSSC------
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEE-EeCCCc------
Confidence 3458777764 5789999988889999954333333421 125699999988887655 344443
Q ss_pred ceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccccccee
Q 037368 94 AVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173 (823)
Q Consensus 94 ~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~ 173 (823)
|..|+..+.. ...+. .....+...|.+++.++++. +-+|+.++.+..++.. ..+.+
T Consensus 385 ---l~~~~~~~~~-----------~~~~~-~~~~~~~~~v~~i~~d~~g~----lWigt~~~Gl~~~~~~-----~~~~~ 440 (781)
T 3v9f_A 385 ---INVFENGKRV-----------AIYNK-ENRELLSNSVLCSLKDSEGN----LWFGTYLGNISYYNTR-----LKKFQ 440 (781)
T ss_dssp ---EEEEETTEEE-----------EECC------CCCSBEEEEEECTTSC----EEEEETTEEEEEECSS-----SCEEE
T ss_pred ---EEEEECCCCe-----------EEEcc-CCCCCCCcceEEEEECCCCC----EEEEeccCCEEEEcCC-----CCcEE
Confidence 8888875310 00000 00011223499999988764 5667766778777642 11222
Q ss_pred EEec---CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccC-----CCccceecccCCCeEEEeeC-Ce
Q 037368 174 LQVD---NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNI-----GCSTNSVAMSDRLELIIGRP-EA 244 (823)
Q Consensus 174 ~~~~---~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~-----~~~~~~~~~s~~~~liv~~~-~~ 244 (823)
.+.. ....|.++...++| .|++++.+++..|+..+.. ........ ...+.+++..++|.+.+|.. ++
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g---~lwigt~~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNK---KIWIGTHAGVFVIDLASKK-VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTS---EEEEEETTEEEEEESSSSS-CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred EeccCCCCCCeEEEEEECCCC---CEEEEECCceEEEeCCCCe-EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 2211 24578888877666 4777777899999976532 22222111 24466777788999888875 68
Q ss_pred EEEEecCCCCcc-cc----ccC-CeEEEEeeC-cEEEEEEecCCCCccEEEEEeCCCC-EEEEec--cccc--eeEEEe-
Q 037368 245 VYFYEVDGRGPC-WA----FEG-EKKLLGWFR-GYLLCVIADQRNSKNIFNVYDLKNR-LIAHSL--VVKE--VSHMLC- 311 (823)
Q Consensus 245 I~i~~~~g~~~~-~~----~~g-~~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D~~~~-~i~~~~--~i~~--v~~v~~- 311 (823)
+..|+.++.... +. +.. ....+..+. ..+-+++ ..+-|..||..++ +..+.. .++. +..+..
T Consensus 517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-----~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d 591 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-----GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISED 591 (781)
T ss_dssp EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-----TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEEC
T ss_pred EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-----CCCceEEECCCCCcEEEccccCCCCCceEEEEEEC
Confidence 999987643210 11 111 123333322 2333333 2244478888654 334432 2222 444433
Q ss_pred ecCcEEEEEcCCeEEEEeec
Q 037368 312 EWGNIILVMTDKSVLCIGEK 331 (823)
Q Consensus 312 ~~~~~~vvs~~~~v~~l~~~ 331 (823)
..|.+++.+ .+.++++.+.
T Consensus 592 ~~g~lW~~t-~~Gl~~~~~~ 610 (781)
T 3v9f_A 592 KNGNIWAST-NTGISCYITS 610 (781)
T ss_dssp SSSCEEEEC-SSCEEEEETT
T ss_pred CCCCEEEEc-CCceEEEECC
Confidence 345555555 4558877643
No 237
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.35 E-value=0.065 Score=57.98 Aligned_cols=231 Identities=8% Similarity=-0.004 Sum_probs=122.7
Q ss_pred EeeCC-CEEEEEe----------cCCeEEEEc-CCCeeeEeEeec-------ccceeEEEEecCCCEEEEEec--CCCCc
Q 037368 31 CSSGR-GKVVIGC----------DDGAVSLLD-RGLKFNFGFQAH-------SSSVLFLQQLKQRNFLVTVGE--DEQVS 89 (823)
Q Consensus 31 ~~~~~-~~l~~gs----------~dG~i~~~d-~~~~~~~~~~~H-------~~~V~~i~~~~~~~~l~s~s~--D~~~~ 89 (823)
..+++ ++++++. .++.|.+|| .+++.+.++..- ...-..+.++|+|++|+.++. +++
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~-- 149 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA-- 149 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe--
Confidence 33444 4676664 367899999 567776655422 122457999999999988764 344
Q ss_pred ccccceeEEEEeCCCCCCCCCCCCCCceEEE-EEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEccccccc
Q 037368 90 AQQSAVCLKVFDLDKMEPEGTSSTSPDCIGI-LRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARER 168 (823)
Q Consensus 90 ~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~ 168 (823)
|.++| .+. ..+++ +. .| .++.+.|++... +++.+.||++..++. -.+.
T Consensus 150 -------v~viD-~t~----------~~~~~~i~-----~~----~~~~~~~~~~~~--~~~~~~dg~~~~vd~-~g~~- 198 (373)
T 2mad_H 150 -------VGLVV-QGG----------SSDDQLLS-----SP----TCYHIHPGAPST--FYLLCAQGGLAKTDH-AGGA- 198 (373)
T ss_pred -------EEEEE-CCC----------CEEeEEcC-----CC----ceEEEEeCCCce--EEEEcCCCCEEEEEC-CCcE-
Confidence 88999 743 23444 32 12 235555665431 445556888887764 1000
Q ss_pred cccee--EEecCCCCc-ceEEEeecCCeEEEEEEcCCeEEEEEecCCC-CcceEEcc-------CC---CccceecccCC
Q 037368 169 ITRFK--LQVDNQCSV-MGLGFRVDGQALQLFAVTPNSVILFSLQNQP-PKRQFLDN-------IG---CSTNSVAMSDR 234 (823)
Q Consensus 169 ~~k~~--~~~~~~~~I-t~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~-~~~~~l~~-------~~---~~~~~~~~s~~ 234 (823)
..... .......|+ ....|.+++. ..++++..+.|.+.|+.+.. .....++- .+ .....+.++|+
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d 277 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS 277 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCC-EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCC
Confidence 00000 001123333 2345666653 34555555678888886432 11111210 11 11122567777
Q ss_pred Ce-EEEee-----------CCeEEEEecCCCCcc--ccccCCeEEEEe--eCcEEEEEEecCCCCccEEEEEeCCCCEEE
Q 037368 235 LE-LIIGR-----------PEAVYFYEVDGRGPC--WAFEGEKKLLGW--FRGYLLCVIADQRNSKNIFNVYDLKNRLIA 298 (823)
Q Consensus 235 ~~-liv~~-----------~~~I~i~~~~g~~~~--~~~~g~~~~i~~--~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~ 298 (823)
+. +.++. ++.|.++|....... +.+.+.+..+.+ ++.+++.++.. .+++|.|||..+..+.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~---~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSA---GTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC---CCCeEEEEECCCCCEE
Confidence 65 33432 246888887643221 233333555544 56644444431 2579999999876543
No 238
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.34 E-value=0.01 Score=63.43 Aligned_cols=187 Identities=11% Similarity=0.041 Sum_probs=107.5
Q ss_pred CeEEEeeC-CCEEEEEec------CCeEEEEc-CCCeeeEeEeec------ccceeEEEEecCC-CEEEEEe---cCCCC
Q 037368 27 NITCCSSG-RGKVVIGCD------DGAVSLLD-RGLKFNFGFQAH------SSSVLFLQQLKQR-NFLVTVG---EDEQV 88 (823)
Q Consensus 27 ~is~~~~~-~~~l~~gs~------dG~i~~~d-~~~~~~~~~~~H------~~~V~~i~~~~~~-~~l~s~s---~D~~~ 88 (823)
.+.+++.. ++.|++.+. ++.|.+|| .++++++++..+ ...+..+++++++ ...+|-+ .++.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~- 146 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA- 146 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE-
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe-
Confidence 46666664 477766653 47999999 668877777642 2457899999754 4556655 5555
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEe-------------ccCCC----C-------CCceEEEEEecCCCC
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRV-------------FTSQF----P-------EAKITSFLVLEEAPP 144 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~-------------~~~~~----p-------~~~v~~va~~~d~~~ 144 (823)
|.+||+.... ..+.+.. .+..+ + ...+..++|+||++.
T Consensus 147 --------i~v~d~~~g~----------~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ 208 (343)
T 2qe8_A 147 --------LIRVDLQTGL----------AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW 208 (343)
T ss_dssp --------EEEEETTTCC----------EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE
T ss_pred --------EEEEECCCCC----------EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE
Confidence 9999987432 1111100 00000 0 012688999999988
Q ss_pred cceEEEEEeCC-eEEEEEcccccccc-------cceeEEecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEe-cCCC
Q 037368 145 ILLIAIGLDNG-CIYCIKGDIARERI-------TRFKLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSL-QNQP 213 (823)
Q Consensus 145 ~~~ia~G~~dG-~V~l~~~~~~~~~~-------~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~-~~~~ 213 (823)
+.++..++ .|..++.+..++.. .... .....+...+++++++|. ++++. .+.|..|+. .++
T Consensus 209 ---ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G~---l~va~~~~~~V~~~d~~~G~- 280 (343)
T 2qe8_A 209 ---LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDHN---IYVGDLAHSAIGVITSADRA- 280 (343)
T ss_dssp ---EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTCC---EEEEEGGGTEEEEEETTTTE-
T ss_pred ---EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ecccCCCCceEEECCCCC---EEEEccCCCeEEEEECCCCC-
Confidence 87776665 44444322111100 0001 112234577999999883 44443 457999998 432
Q ss_pred CcceEEcc-CCCccceecccCCCeEEEee
Q 037368 214 PKRQFLDN-IGCSTNSVAMSDRLELIIGR 241 (823)
Q Consensus 214 ~~~~~l~~-~~~~~~~~~~s~~~~liv~~ 241 (823)
...+... ....+.+++++++|+++++.
T Consensus 281 -~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 281 -YKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp -EEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred -EEEEEECCceecCCeeEECCCCcEEEEe
Confidence 2222221 23345678888888766554
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.30 E-value=0.00016 Score=78.71 Aligned_cols=178 Identities=10% Similarity=0.088 Sum_probs=86.9
Q ss_pred eeCCCEEEEEecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 32 SSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 32 ~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
+..++.+++|+.||.|+.|| .+|+.+.+++. +.+.+..+..++..+++++.|++ |..||....+
T Consensus 6 ~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~---------l~a~d~~tG~---- 70 (369)
T 2hz6_A 6 TLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGS---------LYTLGSKNNE---- 70 (369)
T ss_dssp --CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCC---------EEEC-----C----
T ss_pred eeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCE---------EEEEECCCCc----
Confidence 34678999999999999999 78998877776 56665555667778888889998 9999986432
Q ss_pred CCCCCceEEEEEeccCCCCCCce-EEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEee
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKI-TSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRV 189 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v-~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~ 189 (823)
.+...+... + ..+ .+.++..+ .. +++|+.+|.|+.|+.. .+ +..-.+.... ...++|
T Consensus 71 ------~~w~~~~~~---~-~~~~~sp~~~~~-~~---v~~g~~dg~v~a~D~~----tG-~~~w~~~~~~---~~~~~p 128 (369)
T 2hz6_A 71 ------GLTKLPFTI---P-ELVQASPCRSSD-GI---LYMGKKQDIWYVIDLL----TG-EKQQTLSSAF---ADSLSP 128 (369)
T ss_dssp ------CSEECSCCH---H-HHHTTCSCC---------CCCCEEEEEEEEECCC--------------------------
T ss_pred ------eeeeeeccC---c-cccccCceEecC-CE---EEEEeCCCEEEEEECC----CC-cEEEEecCCC---cccccc
Confidence 111111100 0 000 01111123 35 7778889999999753 12 1111111111 123455
Q ss_pred cCCeEEEEEEc-CCeEEEEEecCCCCcceEEccCCCccceecccC----CCeEEEee-CCeEEEEecC
Q 037368 190 DGQALQLFAVT-PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD----RLELIIGR-PEAVYFYEVD 251 (823)
Q Consensus 190 dg~~~~l~~~t-~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~----~~~liv~~-~~~I~i~~~~ 251 (823)
++ ..+++++ ++.|+.||..+.. ..-.+...+ ....++++ ++.++++. ++.|+.|+..
T Consensus 129 ~~--~~v~~~~~dg~v~a~d~~tG~-~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 129 ST--SLLYLGRTEYTITMYDTKTRE-LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSS-CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred cC--CEEEEEecCCEEEEEECCCCC-EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECC
Confidence 55 3555555 4579999986432 212221111 11223333 25666654 5689999986
No 240
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.30 E-value=0.13 Score=54.99 Aligned_cols=228 Identities=8% Similarity=-0.048 Sum_probs=132.6
Q ss_pred CCCeEEEeeC-CCEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeC
Q 037368 25 SGNITCCSSG-RGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 25 ~~~is~~~~~-~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
++.-+|.... ..+|+++. ...|+..+.++.....+..-...+..+++++.++.| .+-...+. |..+++
T Consensus 33 ~d~~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~---------I~r~~~ 102 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR---------ILRANL 102 (349)
T ss_dssp TTSSCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTE---------EEEEET
T ss_pred CCCCcccccccCceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCc---------eEEEec
Confidence 3456787754 45676665 455888886554333333333468899999765555 44444454 888888
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCS 181 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~ 181 (823)
+... ...+-...... +..+|+++.+.. -..+-..++.|.+++.+ +....++. ..-..
T Consensus 103 ~g~~-----------~~~~~~~~~~~----p~glavd~~~g~--ly~~d~~~~~I~~~~~d-----G~~~~~l~~~~l~~ 160 (349)
T 3v64_C 103 NGSN-----------VEEVVSTGLES----PGGLAVDWVHDK--LYWTDSGTSRIEVANLD-----GAHRKVLLWQSLEK 160 (349)
T ss_dssp TSCS-----------CEEEECSSCSC----CCEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECTTCSC
T ss_pred CCCC-----------ceEEEeCCCCC----ccEEEEecCCCe--EEEEcCCCCeEEEEcCC-----CCceEEEEeCCCCC
Confidence 7421 11221111112 578999985544 04444556778877653 22223333 22244
Q ss_pred cceEEEeecCCeEEEEEEcC---CeEEEEEecCCCCcceEE-ccCCCccceecccC-CCeEEEee--CCeEEEEecCCCC
Q 037368 182 VMGLGFRVDGQALQLFAVTP---NSVILFSLQNQPPKRQFL-DNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRG 254 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l-~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~ 254 (823)
-.+|++.|.+ ..||++.. ..|..+++++.. ..++ ......++.++++| ++.+.++- .+.|..++.+|..
T Consensus 161 P~~iavdp~~--g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 161 PRAIALHPME--GTIYWTDWGNTPRIEASSMDGSG--RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp EEEEEEETTT--TEEEEEECSSSCEEEEEETTSCS--CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cceEEEecCc--CeEEEeccCCCCEEEEEeCCCCC--cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 6899999865 36777753 458888887642 2333 22233467789986 56666653 3589999988764
Q ss_pred ccccc---cCCeEEEEeeCcEEEEEEecCCCCccEEEEEeC
Q 037368 255 PCWAF---EGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 255 ~~~~~---~g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
....+ -+++..++.+.+++..... ..+.|..+|.
T Consensus 237 ~~~~~~~~~~~P~giav~~~~ly~td~----~~~~V~~~~~ 273 (349)
T 3v64_C 237 RKAVISQGLPHPFAITVFEDSLYWTDW----HTKSINSANK 273 (349)
T ss_dssp CEEEECSSCSSEEEEEEETTEEEEEET----TTTEEEEEET
T ss_pred eEEEEeCCCCCceEEEEECCEEEEecC----CCCeEEEEEc
Confidence 32222 1356777777777766543 2456777763
No 241
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.28 E-value=0.0085 Score=64.10 Aligned_cols=196 Identities=9% Similarity=0.032 Sum_probs=107.7
Q ss_pred eEEEee-CCCEEEEE-e--cCC--eEEEEcCCCeeeEeEe-------ecccceeEEEEecCCCEEEEEec-----CCCCc
Q 037368 28 ITCCSS-GRGKVVIG-C--DDG--AVSLLDRGLKFNFGFQ-------AHSSSVLFLQQLKQRNFLVTVGE-----DEQVS 89 (823)
Q Consensus 28 is~~~~-~~~~l~~g-s--~dG--~i~~~d~~~~~~~~~~-------~H~~~V~~i~~~~~~~~l~s~s~-----D~~~~ 89 (823)
...++. +++.++++ . .+| +|...+ ++++. .|. +|-..+..|+++++|.+.++-+. +.+
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~-- 94 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK-- 94 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE--
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe--
Confidence 344444 35555444 3 234 455555 55543 332 24468999999999887665433 344
Q ss_pred ccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccC-CCCCCceEEEEEecCCCCcceEEEEE---eCCeEEEEEcccc
Q 037368 90 AQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTS-QFPEAKITSFLVLEEAPPILLIAIGL---DNGCIYCIKGDIA 165 (823)
Q Consensus 90 ~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~v~~va~~~d~~~~~~ia~G~---~dG~V~l~~~~~~ 165 (823)
|.+||+.+. ..++++..... ..+...+..++++|++.. ..++.. .++.|.+|+..-
T Consensus 95 -------i~~~d~~tg----------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~--~yvtd~~~~~~~~i~v~d~~~- 154 (343)
T 2qe8_A 95 -------LVAWDTLNN----------QLSRVIYLPPPITLSNSFVNDLAVDLIHNF--VYISDPAPDDKAALIRVDLQT- 154 (343)
T ss_dssp -------EEEEETTTT----------EEEEEEECCTTTSCTTCCCCEEEEETTTTE--EEEEECCSGGGCEEEEEETTT-
T ss_pred -------EEEEECCCC----------eEEEEEECChhhcccccccceEEEecCCCE--EEEEcCccCCCCeEEEEECCC-
Confidence 999998732 24555543211 111123689999986443 045544 578899997530
Q ss_pred cccccceeEE--------------ec--------C-------CCCcceEEEeecCCeEEEEEEcCC--eEEEEEecC--C
Q 037368 166 RERITRFKLQ--------------VD--------N-------QCSVMGLGFRVDGQALQLFAVTPN--SVILFSLQN--Q 212 (823)
Q Consensus 166 ~~~~~k~~~~--------------~~--------~-------~~~It~l~fs~dg~~~~l~~~t~~--~V~~~d~~~--~ 212 (823)
+...+++ .. . ...+.+|+|+++| ..|+++... .++.++... .
T Consensus 155 ---g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg--~~ly~~~~~~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 155 ---GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN--EWLYLSPMHSTSMYRIKSADLSN 229 (343)
T ss_dssp ---CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS--CEEEEEESSCSEEEEEEHHHHTC
T ss_pred ---CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC--CEEEEEeCCCCeEEEEEHHHhcC
Confidence 1001111 00 0 1235789999998 456666433 465555321 1
Q ss_pred CC-----c---ceEEccCCCccceecccCCCeEEEee--CCeEEEEec-CCC
Q 037368 213 PP-----K---RQFLDNIGCSTNSVAMSDRLELIIGR--PEAVYFYEV-DGR 253 (823)
Q Consensus 213 ~~-----~---~~~l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~~~-~g~ 253 (823)
.. . ...+ ++...+..++++++|.+.++. ++.|.+|+. +|+
T Consensus 230 ~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 230 LQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp TTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 00 0 0111 122245567888999877653 468999998 553
No 242
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.28 E-value=0.15 Score=58.38 Aligned_cols=254 Identities=11% Similarity=-0.006 Sum_probs=135.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHhcCCCHH-----------------HHHHHHHHHhhhhccCCCHHHHHHHHHHHhCC--c
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQQADAA-----------------ATAEVLRKYGDHLYSKQDYDEAMSQYILTIGH--L 394 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~~~~~~-----------------~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~--~ 394 (823)
......+.+.++|++|+++.+.. .+.. .-...+...|.-+...|++++|...|-+.+.. .
T Consensus 154 ~~l~~~~~~~g~~~~A~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 232 (597)
T 2xpi_A 154 YLAAFCLVKLYDWQGALNLLGET-NPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAK 232 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHCSS-CTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhHHHHHHHHhcc-CCccccccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCch
Confidence 44567888999999999998742 1111 13456777888899999999999999887431 1
Q ss_pred ChHHHHHH-----------------------------------------hhchhhHHHHHHHHHHHHHcCCCChhHHHHH
Q 037368 395 EPSYVIQK-----------------------------------------FLDAQRIYNLTNYLEKLHEKGFASKDHTTLL 433 (823)
Q Consensus 395 eps~vI~k-----------------------------------------Fl~~~~~~~L~~YL~~l~~~~~~~~~~~~lL 433 (823)
.+...... |...++.+.=..++...... ..+......+
T Consensus 233 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~l 311 (597)
T 2xpi_A 233 CYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGL-EKSSDLLLCK 311 (597)
T ss_dssp CHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHHHHTSTTG-GGCHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHHHHHhhcC-CchHHHHHHH
Confidence 12111100 00112222222222221111 0222333445
Q ss_pred HHHHHhcCChh----hHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHh----CChHHH----HHHHHHhhc
Q 037368 434 LNCYTKLKDVE----KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKA----GKHELY----LKILLEDLG 501 (823)
Q Consensus 434 l~~y~kl~~~~----~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~----~~~~~~----l~il~~~~~ 501 (823)
..+|.+.++.+ .+++.++..+ ....-......++.+.|++++|+.+.... .....+ ..++. ..|
T Consensus 312 ~~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g 387 (597)
T 2xpi_A 312 ADTLFVRSRFIDVLAITTKILEIDP---YNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYL-CVN 387 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT---TCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHH-HTT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHcCc---ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-Hhc
Confidence 66777777643 3444443332 11223456666777888888888877642 122221 23333 348
Q ss_pred CHHHHHHHHhcC---ChHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHH---HHhh
Q 037368 502 RYDEALQYISSL---DPSQAGVTVKEYGKILI-EHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVD---FLNI 574 (823)
Q Consensus 502 ~~~~al~yl~~l---~~~~~~~~i~k~~~~Ll-~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 574 (823)
++++|++++.+. .+.+ .......+..+. ...++++++++.+..... +.++.. +...
T Consensus 388 ~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~----------------~~~~~~~~~l~~~ 450 (597)
T 2xpi_A 388 KISEARRYFSKSSTMDPQF-GPAWIGFAHSFAIEGEHDQAISAYTTAARLF----------------QGTHLPYLFLGMQ 450 (597)
T ss_dssp CHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT----------------TTCSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----------------ccchHHHHHHHHH
Confidence 888888888753 2221 112222232222 345677777776654211 111211 2222
Q ss_pred h--ccCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccc
Q 037368 575 F--VHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSY 613 (823)
Q Consensus 575 f--~~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~ 613 (823)
+ .++.+....+++.++...+. ....++.+..+|...
T Consensus 451 ~~~~g~~~~A~~~~~~~~~~~~~---~~~~~~~l~~~~~~~ 488 (597)
T 2xpi_A 451 HMQLGNILLANEYLQSSYALFQY---DPLLLNELGVVAFNK 488 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHh
Confidence 2 23566777788887776543 346777888887764
No 243
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.21 E-value=0.13 Score=55.92 Aligned_cols=226 Identities=8% Similarity=-0.058 Sum_probs=129.3
Q ss_pred CeEEEeeC-CCEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCC
Q 037368 27 NITCCSSG-RGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 27 ~is~~~~~-~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
.-+|...+ ..+|+++. ...|+.++..+.....+..-...+..+++++.++.| ++-...+. |..|+++.
T Consensus 78 ~~~C~~~~~~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~---------I~r~~~~g 147 (386)
T 3v65_B 78 RRSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDR---------ILRANLNG 147 (386)
T ss_dssp SSCEEECSSCCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTE---------EEEEETTS
T ss_pred CCeECCccccceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCc---------EEEEecCC
Confidence 34565543 35666654 456888885544332333333568899999755554 44444444 88888874
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcc
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVM 183 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It 183 (823)
.. ..++-...... +..+|+++.+.. -..+-..++.|.+++.+ +....++.. .-..-.
T Consensus 148 ~~-----------~~~~~~~~~~~----p~glavd~~~g~--lY~~d~~~~~I~~~~~d-----g~~~~~l~~~~l~~P~ 205 (386)
T 3v65_B 148 SN-----------VEEVVSTGLES----PGGLAVDWVHDK--LYWTDSGTSRIEVANLD-----GAHRKVLLWQSLEKPR 205 (386)
T ss_dssp CC-----------EEEEECSSCSC----CCCEEEETTTTE--EEEEETTTTEEEECBTT-----SCSCEEEECSSCSCEE
T ss_pred CC-----------cEEEEeCCCCC----ccEEEEEeCCCe--EEEEcCCCCeEEEEeCC-----CCceEEeecCCCCCCc
Confidence 21 22221111112 577899975544 03444445667766542 222233332 224568
Q ss_pred eEEEeecCCeEEEEEEcC---CeEEEEEecCCCCcceEE-ccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcc
Q 037368 184 GLGFRVDGQALQLFAVTP---NSVILFSLQNQPPKRQFL-DNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPC 256 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l-~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~ 256 (823)
+|++.|.+ ..||++.. ..|..+++++.. ..++ ...-..++.++++| ++++.++- .+.|+.++.+|....
T Consensus 206 giavdp~~--g~ly~td~~~~~~I~r~~~dG~~--~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 206 AIALHPME--GTIYWTDWGNTPRIEASSMDGSG--RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 281 (386)
T ss_dssp EEEEETTT--TEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred EEEEEcCC--CeEEEeccCCCCEEEEEeCCCCC--cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence 99999865 36777753 458888877642 2333 22233467789986 55666653 358999998876542
Q ss_pred ccc---cCCeEEEEeeCcEEEEEEecCCCCccEEEEEeC
Q 037368 257 WAF---EGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 257 ~~~---~g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
..+ -+++..++.+++++..... ..+.|..+|.
T Consensus 282 ~~~~~~~~~P~giav~~~~ly~td~----~~~~V~~~~~ 316 (386)
T 3v65_B 282 AVISQGLPHPFAITVFEDSLYWTDW----HTKSINSANK 316 (386)
T ss_dssp EEECSSCSSEEEEEEETTEEEEEET----TTTEEEEEET
T ss_pred EEEECCCCCceEEEEECCEEEEeeC----CCCeEEEEEC
Confidence 222 1357778778777766543 3467888874
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.15 E-value=0.028 Score=60.65 Aligned_cols=93 Identities=8% Similarity=-0.152 Sum_probs=66.2
Q ss_pred eEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEe----------cCCCCcccccceeEEEEeCCCCCCCCCCCCC
Q 037368 46 AVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVG----------EDEQVSAQQSAVCLKVFDLDKMEPEGTSSTS 114 (823)
Q Consensus 46 ~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s----------~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~ 114 (823)
+|.++| .+++.+.++..-..+ ++.++|+|+.+..+. .+++ |.+||+.+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~---------VsviD~~T~--------- 106 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDY---------VEVFDPVTF--------- 106 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEE---------EEEECTTTC---------
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCE---------EEEEECCCC---------
Confidence 889999 778999888765556 899999999887775 2455 999999853
Q ss_pred CceEEEEEecc-CCC-CCCceEEEEEecCCCCcceEEEEEe--CCeEEE--EEc
Q 037368 115 PDCIGILRVFT-SQF-PEAKITSFLVLEEAPPILLIAIGLD--NGCIYC--IKG 162 (823)
Q Consensus 115 ~~~~~~~~~~~-~~~-p~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l--~~~ 162 (823)
..++++.+.. ..+ .+.....++++|||+. +.++.. ++.|.+ +|.
T Consensus 107 -~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~---lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 107 -LPIADIELPDAPRFSVGPRVHIIGNCASSAC---LLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp -CEEEEEEETTSCSCCBSCCTTSEEECTTSSC---EEEEECSSSCEEEEEETTT
T ss_pred -CEEEEEECCCccccccCCCcceEEEcCCCCE---EEEEccCCCCeEEEEEEch
Confidence 3577776541 000 0011478999999999 888764 356777 654
No 245
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.08 E-value=0.25 Score=59.10 Aligned_cols=264 Identities=12% Similarity=0.060 Sum_probs=145.2
Q ss_pred CCCeEEEee-CCCEEEEEecCCeEEEEcCCCeeeEeEee---------------cccceeEEEEecCCCEEEEEecCCCC
Q 037368 25 SGNITCCSS-GRGKVVIGCDDGAVSLLDRGLKFNFGFQA---------------HSSSVLFLQQLKQRNFLVTVGEDEQV 88 (823)
Q Consensus 25 ~~~is~~~~-~~~~l~~gs~dG~i~~~d~~~~~~~~~~~---------------H~~~V~~i~~~~~~~~l~s~s~D~~~ 88 (823)
...|.+++. .++.|.+||..+-|.+++........+.. ....|.+|..+++|++-+ ++.++.
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~G- 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGG- 334 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSC-
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCe-
Confidence 345877776 56899999986678889844332222221 235799999999888655 344443
Q ss_pred cccccceeEEEEeCCCCCCCCCCCCCCceEEEEEec-----cCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcc
Q 037368 89 SAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVF-----TSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGD 163 (823)
Q Consensus 89 ~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~ 163 (823)
|..++..... ...+... ....+...|.+++.++++. +-+|+.++.|..++..
T Consensus 335 --------l~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~----lWigt~~~Gl~~~~~~ 391 (781)
T 3v9f_A 335 --------INFISNAPPT-----------FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK----LWIGTDGGGINVFENG 391 (781)
T ss_dssp --------EEEECSSCCS-----------CEEEC----CCCSSCCSSSCEEEEEECTTSC----EEEEEBSSCEEEEETT
T ss_pred --------EEEeCCCCCc-----------ceeeccCccccccCCCCCcceEEEEEcCCCC----EEEEeCCCcEEEEECC
Confidence 8888876321 1111100 0011123499999998864 6678877778888753
Q ss_pred cccccccceeEEe----cCCCCcceEEEeecCCeEEEEEEcC-CeEEEEEecCCCCcceEEc---cCCCccceecccCCC
Q 037368 164 IARERITRFKLQV----DNQCSVMGLGFRVDGQALQLFAVTP-NSVILFSLQNQPPKRQFLD---NIGCSTNSVAMSDRL 235 (823)
Q Consensus 164 ~~~~~~~k~~~~~----~~~~~It~l~fs~dg~~~~l~~~t~-~~V~~~d~~~~~~~~~~l~---~~~~~~~~~~~s~~~ 235 (823)
. .+...+. -....|.++...++| .|++++. +++..|+..++. ...+. .....+.++...++|
T Consensus 392 ----~-~~~~~~~~~~~~~~~~v~~i~~d~~g---~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 392 ----K-RVAIYNKENRELLSNSVLCSLKDSEG---NLWFGTYLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNK 461 (781)
T ss_dssp ----E-EEEECC-----CCCSBEEEEEECTTS---CEEEEETTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTS
T ss_pred ----C-CeEEEccCCCCCCCcceEEEEECCCC---CEEEEeccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCC
Confidence 1 1111111 124568888876666 3666765 689888865431 11121 123456677777889
Q ss_pred eEEEeeCCeEEEEecCCCCcc-cc-cc------CCeEEEEeeC-cEEEEEEecCCCCccEEEEEeCCCCEEE-Eec--cc
Q 037368 236 ELIIGRPEAVYFYEVDGRGPC-WA-FE------GEKKLLGWFR-GYLLCVIADQRNSKNIFNVYDLKNRLIA-HSL--VV 303 (823)
Q Consensus 236 ~liv~~~~~I~i~~~~g~~~~-~~-~~------g~~~~i~~~~-~ylv~~s~d~~~~~~~I~I~D~~~~~i~-~~~--~i 303 (823)
.+.+|..++|..|+..+.... +. .. .....+..+. ..+-+++. .+-|..||..++... +.. .+
T Consensus 462 ~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----~~Gl~~~~~~~~~~~~~~~~~~l 536 (781)
T 3v9f_A 462 KIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-----GGGVGIYTPDMQLVRKFNQYEGF 536 (781)
T ss_dssp EEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-----SSCEEEECTTCCEEEEECTTTTC
T ss_pred CEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-----CCCEEEEeCCCCeEEEccCCCCC
Confidence 998888789999987642211 11 11 1123333332 23333332 123777888765433 321 22
Q ss_pred cc--eeEEEe-ecCcEEEEEcCCeE-EEEe
Q 037368 304 KE--VSHMLC-EWGNIILVMTDKSV-LCIG 329 (823)
Q Consensus 304 ~~--v~~v~~-~~~~~~vvs~~~~v-~~l~ 329 (823)
+. +..+.. ..|.+++.+. +.+ +++.
T Consensus 537 ~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 537 CSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp SCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred CCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 22 555543 3455666665 445 6654
No 246
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.04 E-value=0.12 Score=58.98 Aligned_cols=222 Identities=11% Similarity=-0.010 Sum_probs=126.1
Q ss_pred hhhhccCCCHHHHHHHHHHHhCCc-C---hHHHHHHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh-
Q 037368 371 GDHLYSKQDYDEAMSQYILTIGHL-E---PSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK- 445 (823)
Q Consensus 371 ~d~L~~k~~y~~A~~~y~~ti~~~-e---ps~vI~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~- 445 (823)
++.+...|++++|.+.|-+.+..- + +...+.-+...++.+.=..++......+..+..-...+..+|.+.++.+.
T Consensus 279 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 358 (597)
T 2xpi_A 279 LNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKL 358 (597)
T ss_dssp SCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHH
T ss_pred HHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHH
Confidence 666778999999999998875431 1 12234455556666655566666544444444445667788888887654
Q ss_pred ---HHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHh----CChHH----HHHHHHHhhcCHHHHHHHHhc--
Q 037368 446 ---LNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKA----GKHEL----YLKILLEDLGRYDEALQYISS-- 512 (823)
Q Consensus 446 ---l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~----~~~~~----~l~il~~~~~~~~~al~yl~~-- 512 (823)
+.+.++..+ ....-......++.+.|.+++|+.+.++. ..+.. ...++.. .|++++|++++.+
T Consensus 359 ~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~ 434 (597)
T 2xpi_A 359 YLISNDLVDRHP---EKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAI-EGEHDQAISAYTTAA 434 (597)
T ss_dssp HHHHHHHHHHCT---TSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCc---ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 333333322 10111223446778889999999887742 22222 2334444 4999999999876
Q ss_pred -CChHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHH---HHhhhc--cCcHHHHHH
Q 037368 513 -LDPSQAGVTVKEYGKIL-IEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVD---FLNIFV--HHPESLMDF 585 (823)
Q Consensus 513 -l~~~~~~~~i~k~~~~L-l~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~f~--~~~~~~~~y 585 (823)
..+.+. ......+..+ -....+++.+.+.+..... +.++.. +..++. ++.+..+.+
T Consensus 435 ~~~~~~~-~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~~g~~~~A~~~ 497 (597)
T 2xpi_A 435 RLFQGTH-LPYLFLGMQHMQLGNILLANEYLQSSYALF----------------QYDPLLLNELGVVAFNKSDMQTAINH 497 (597)
T ss_dssp HTTTTCS-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhCccch-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----------------CCChHHHHHHHHHHHHhCCHHHHHHH
Confidence 222221 1222222222 2346677888776654321 122332 222222 356778888
Q ss_pred HHHHHhhc---CCCCch-hhHHHHHHHHhccc
Q 037368 586 LEKYTNKV---KDSPAQ-VEIHNTLLELYLSY 613 (823)
Q Consensus 586 Le~~i~~~---~~~~~~-~~~~n~llelyl~~ 613 (823)
++.++... +..|.. ...++.+..+|...
T Consensus 498 ~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~ 529 (597)
T 2xpi_A 498 FQNALLLVKKTQSNEKPWAATWANLGHAYRKL 529 (597)
T ss_dssp HHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhccccchhhHHHHHHHHHHHHHHh
Confidence 88887653 112222 56888888888775
No 247
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.018 Score=54.59 Aligned_cols=132 Identities=12% Similarity=0.095 Sum_probs=81.2
Q ss_pred cChHHHHHHHHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHHHHhhchhhHH
Q 037368 331 KDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIY 410 (823)
Q Consensus 331 ~~~~~~i~~L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl~~~~~~ 410 (823)
.|.+.+.+.-++-|+++.|+++|+..+ -...+++-|+.-+.+|+++-|.++|.++ +.++ .+-..+.-.+..+
T Consensus 6 ~D~~~rF~LAL~lg~l~~A~e~a~~l~-----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~-~D~~--~L~~Ly~~tg~~e 77 (177)
T 3mkq_B 6 QDPHIRFDLALEYGNLDAALDEAKKLN-----DSITWERLIQEALAQGNASLAEMIYQTQ-HSFD--KLSFLYLVTGDVN 77 (177)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHC-----CHHHHHHHHHHHHHTTCHHHHHHHHHHT-TCHH--HHHHHHHHHTCHH
T ss_pred CChHHHHHHHHhcCCHHHHHHHHHHhC-----CHHHHHHHHHHHHHcCChHHHHHHHHHh-CCHH--HHHHHHHHhCCHH
Confidence 577889999999999999999998743 2467999999999999999999999997 3222 2222221111111
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChH
Q 037368 411 NLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHE 490 (823)
Q Consensus 411 ~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~ 490 (823)
.|. + +.+.-..-++. ...|.... ..=|++.+++++.+.|++.+|..+|+.+|..+
T Consensus 78 ~L~----k--------------la~iA~~~g~~--n~af~~~l-----~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~~ 132 (177)
T 3mkq_B 78 KLS----K--------------MQNIAQTREDF--GSMLLNTF-----YNNSTKERSSIFAEGGSLPLAYAVAKANGDEA 132 (177)
T ss_dssp HHH----H--------------HHHHHHHTTCH--HHHHHHHH-----HHTCHHHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred HHH----H--------------HHHHHHHCccH--HHHHHHHH-----HcCCHHHHHHHHHHCCChHHHHHHHHHcCcHH
Confidence 111 1 10000000110 01111100 12367788888888888888888888776655
Q ss_pred HHHHH
Q 037368 491 LYLKI 495 (823)
Q Consensus 491 ~~l~i 495 (823)
.+-++
T Consensus 133 ~a~~~ 137 (177)
T 3mkq_B 133 AASAF 137 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54333
No 248
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.96 E-value=0.011 Score=65.01 Aligned_cols=191 Identities=10% Similarity=0.137 Sum_probs=106.2
Q ss_pred EeeCC-CEEEEEe----------cCCeEEEEc-CCCeeeEeEeec-------ccceeEEEEecCCCEEEEEec--CCCCc
Q 037368 31 CSSGR-GKVVIGC----------DDGAVSLLD-RGLKFNFGFQAH-------SSSVLFLQQLKQRNFLVTVGE--DEQVS 89 (823)
Q Consensus 31 ~~~~~-~~l~~gs----------~dG~i~~~d-~~~~~~~~~~~H-------~~~V~~i~~~~~~~~l~s~s~--D~~~~ 89 (823)
..+++ ++++++. .++.|.++| .+++.++++.-- ...-..+.++|+|++|..+.. +++
T Consensus 124 a~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~-- 201 (426)
T 3c75_H 124 VAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA-- 201 (426)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE--
T ss_pred EECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe--
Confidence 34444 4566654 478999999 778887776531 123457899999999988764 344
Q ss_pred ccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccC--CCCCCceEEEEEecCCCCcceEEEEEeCCe-----------
Q 037368 90 AQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTS--QFPEAKITSFLVLEEAPPILLIAIGLDNGC----------- 156 (823)
Q Consensus 90 ~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~v~~va~~~d~~~~~~ia~G~~dG~----------- 156 (823)
|.|.|+.+. ..++++.+... ..|++.-.-+++++|++. +.+...+|+
T Consensus 202 -------VsVID~~t~----------kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~---~~V~~~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 202 -------VGVVDLEGK----------TFDRMLDVPDCYHIFPASPTVFYMNCRDGSL---ARVDFADGETKVTNTEVFHT 261 (426)
T ss_dssp -------EEEEETTTT----------EEEEEEECCSEEEEEEEETTEEEEEETTSSE---EEEECCTTCCEEEECCCCSC
T ss_pred -------EEEEECCCC----------eEEEEEEcCCceeeccCCCcEEEEEcCCCCE---EEEECCCCcEEEEeeeeecc
Confidence 889999853 23444443100 001000112445555544 434333333
Q ss_pred --------------------------EEEEEcccccccccceeEEe--c-----------CCCCcceEEEeecCCeEEEE
Q 037368 157 --------------------------IYCIKGDIARERITRFKLQV--D-----------NQCSVMGLGFRVDGQALQLF 197 (823)
Q Consensus 157 --------------------------V~l~~~~~~~~~~~k~~~~~--~-----------~~~~It~l~fs~dg~~~~l~ 197 (823)
|.+++.. +....++. . .......++|+++++ .+|
T Consensus 262 ~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~-----~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~--rly 334 (426)
T 3c75_H 262 EDELLINHPAFSLRSGRLVWPTYTGKIFQADLT-----AEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD--RIY 334 (426)
T ss_dssp TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEEC-----SSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT--EEE
T ss_pred CCCceeeEeeecCCCCEEEEEeCCCcEEEEecc-----CCceEEeeeeeeccccccccccccCCceeeEEcCCCC--EEE
Confidence 3333220 00000000 0 011122378899884 566
Q ss_pred EEcC-----------CeEEEEEecCCCCcceEEccCCCccceecccCCCe-E-EEee--CCeEEEEecCC
Q 037368 198 AVTP-----------NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-L-IIGR--PEAVYFYEVDG 252 (823)
Q Consensus 198 ~~t~-----------~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-l-iv~~--~~~I~i~~~~g 252 (823)
+++. +.|.++|+.+.. ....+. -+..+..+.|+|||+ + ++++ ++.|.++|+..
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~k-vv~~I~-vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGE-RINKIE-LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred EEecccccccccCCCCEEEEEECCCCe-EEEEEE-CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 6642 359999987653 333332 233567889999987 4 4554 47999999874
No 249
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.92 E-value=0.16 Score=54.63 Aligned_cols=251 Identities=11% Similarity=0.028 Sum_probs=134.5
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChH------HHHHHhhchhhH
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPS------YVIQKFLDAQRI 409 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps------~vI~kFl~~~~~ 409 (823)
-..+++.|+|+.|++..+.. ..++. -.......|..++..|++++|...+.+.+. .+|. ....-+...++.
T Consensus 6 a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~-~~p~~~~~~~~lg~~~~~~g~~ 83 (388)
T 1w3b_A 6 AHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIK-QNPLLAEAYSNLGNVYKERGQL 83 (388)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCCchHHHHHHHHHHHHCCCH
Confidence 35677899999999987652 11111 123455667788899999999998876643 2232 122233444555
Q ss_pred HHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChh----hHHHhhcCCCCCCcccCC-HHHHHHHHHhcCCHHHHHHHHH
Q 037368 410 YNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVE----KLNMFIKGEDGVGEHKFD-VETAIRVCRAANYHEHAMYVAK 484 (823)
Q Consensus 410 ~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~----~l~~fi~~~~~~~~~~~d-~~~ai~vl~~~g~~~~a~~la~ 484 (823)
+.=..++.........+..-...|..+|.+.++.+ .+.+.++..+ + ... ....-.++...|++++|+.+..
T Consensus 84 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---~-~~~~~~~l~~~~~~~g~~~~A~~~~~ 159 (388)
T 1w3b_A 84 QEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNP---D-LYCVRSDLGNLLKALGRLEEAKACYL 159 (388)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCT---T-CTHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---C-cHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 44444444433333333333344666777777643 3444444333 1 111 1223345667788888887765
Q ss_pred H----hCChHHH---HHHHHHhhcCHHHHHHHHhcC---ChHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHhhcCCCCcc
Q 037368 485 K----AGKHELY---LKILLEDLGRYDEALQYISSL---DPSQAGVTVKEYGKILIE-HKPMETIDILLRLCTEDGESTK 553 (823)
Q Consensus 485 ~----~~~~~~~---l~il~~~~~~~~~al~yl~~l---~~~~~~~~i~k~~~~Ll~-~~p~~~~~ll~~~~~~~~~~~~ 553 (823)
+ ...+..+ +.......+++++|+.++.+. .+. ........|..+.. ...++++..+.+...-.
T Consensus 160 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~----- 233 (388)
T 1w3b_A 160 KAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN-FLDAYINLGNVLKEARIFDRAVAAYLRALSLS----- 233 (388)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC-----
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----
Confidence 3 2222222 222333458999999888762 222 22344444544333 24556666655543211
Q ss_pred cCCCCCcccCCCCCHHH---HHhhh--ccCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccc
Q 037368 554 RGASSSTYMSMLPSPVD---FLNIF--VHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSY 613 (823)
Q Consensus 554 ~~~~~~~~~~~~~~~~~---~~~~f--~~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~ 613 (823)
+-++.. +...+ .+..+..+.+++.++...+.. ...+..+..+|...
T Consensus 234 -----------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~ 284 (388)
T 1w3b_A 234 -----------PNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF---PDAYCNLANALKEK 284 (388)
T ss_dssp -----------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC---HHHHHHHHHHHHHH
T ss_pred -----------cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHc
Confidence 111211 11112 235667777888888765543 45667777777654
No 250
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.91 E-value=0.27 Score=53.64 Aligned_cols=229 Identities=9% Similarity=-0.057 Sum_probs=130.1
Q ss_pred eEEEeeCC-CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSSGR-GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~~~-~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
-+|..... .+|+++. ...|+..+..+.....+...-..+..|++++.++.| .+=...+. |..+++...
T Consensus 75 ~~C~~~~~~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~---------I~~~~~~g~ 144 (400)
T 3p5b_L 75 KACKAVGSIAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM---------ICSTQLDRA 144 (400)
T ss_dssp SSCCCSTTSCEEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTE---------EEEEEC---
T ss_pred cceeeccccceeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCe---------EEEEEcccC
Confidence 34544433 4565554 578898885444333344445678999999865554 44444444 888888642
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCC-CcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcc
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVM 183 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It 183 (823)
.. ... ..++- .... ..+..+|+++.+. . ..+-..++.|.+.+.+ +....++. ..-....
T Consensus 145 ~~----~~~---~~~~~-~~~~---~~p~glavD~~~~~l---Y~~d~~~~~I~~~~~~-----g~~~~~l~~~~~~~P~ 205 (400)
T 3p5b_L 145 HG----VSS---YDTVI-SRDI---QAPDGLAVDWIHSNI---YWTDSVLGTVSVADTK-----GVKRKTLFRENGSKPR 205 (400)
T ss_dssp -------CC---CEEEE-CSSC---SCEEEEEEETTTTEE---EEEETTTTEEEEECTT-----TCSEEEEEECSSCCEE
T ss_pred CC----CCc---ceEEE-eCCC---CCcccEEEEecCCce---EEEECCCCeEEEEeCC-----CCceEEEEeCCCCCcc
Confidence 10 001 11111 1111 2278999998443 4 4444556778777643 22233333 2334468
Q ss_pred eEEEeecCCeEEEEEEcC---CeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCccc
Q 037368 184 GLGFRVDGQALQLFAVTP---NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCW 257 (823)
Q Consensus 184 ~l~fs~dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~ 257 (823)
+|++.|.+ ..||++.. ..|...++++.. ........-..++.+++++ ++++.++- .+.|..++.+|.....
T Consensus 206 ~iavdp~~--g~ly~td~~~~~~I~~~~~dG~~-~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (400)
T 3p5b_L 206 AIVVDPVH--GFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 282 (400)
T ss_dssp EEEEETTT--TEEEEEECSSSCCEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred eEEEeccc--CeEEEEeCCCCCEEEEEeCCCCc-cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEE
Confidence 99999865 36888752 458888887643 2222232224567789986 55666653 3589999988765422
Q ss_pred ccc-----CCeEEEEeeCcEEEEEEecCCCCccEEEEEeC
Q 037368 258 AFE-----GEKKLLGWFRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 258 ~~~-----g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
... .++..++.+++++..... ..+.|..+|.
T Consensus 283 ~~~~~~~l~~P~gl~v~~~~lywtd~----~~~~V~~~~~ 318 (400)
T 3p5b_L 283 ILEDEKRLAHPFSLAVFEDKVFWTDI----INEAIFSANR 318 (400)
T ss_dssp EEECSSTTSSEEEEEEETTEEEEEES----SSCSEEEEES
T ss_pred EEeCCCCCCCCEEEEEeCCEEEEecC----CCCeEEEEEc
Confidence 222 346778888887766543 2356777774
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.88 E-value=0.15 Score=53.60 Aligned_cols=191 Identities=10% Similarity=-0.028 Sum_probs=106.2
Q ss_pred eEEEeeC--CCEEEEEecCCeEEEEcCCCeeeEeEeec-----ccceeEEEEec-CCCEEEEEecC--------------
Q 037368 28 ITCCSSG--RGKVVIGCDDGAVSLLDRGLKFNFGFQAH-----SSSVLFLQQLK-QRNFLVTVGED-------------- 85 (823)
Q Consensus 28 is~~~~~--~~~l~~gs~dG~i~~~d~~~~~~~~~~~H-----~~~V~~i~~~~-~~~~l~s~s~D-------------- 85 (823)
..+++.. ++.|++++..+.|..+|..+..++.+... -...+.|++++ +|++.++-+..
T Consensus 82 p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred CceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 4455543 57898888777799999654433344321 13578899999 99888875431
Q ss_pred ---CCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEE-EeCCeEEEEE
Q 037368 86 ---EQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIG-LDNGCIYCIK 161 (823)
Q Consensus 86 ---~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G-~~dG~V~l~~ 161 (823)
+. |..||.... ......... .. ...++++||++. +.++ +.++.|..|+
T Consensus 162 ~~~g~---------v~~~d~~~~----------~~~~~~~~~--~~----p~gia~~~dg~~---lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 162 DKTGR---------LIKYDPSTK----------ETTLLLKEL--HV----PGGAEVSADSSF---VLVAEFLSHQIVKYW 213 (322)
T ss_dssp CCCEE---------EEEEETTTT----------EEEEEEEEE--SC----CCEEEECTTSSE---EEEEEGGGTEEEEEE
T ss_pred CCCce---------EEEEeCCCC----------EEEEeccCC--cc----CcceEECCCCCE---EEEEeCCCCeEEEEE
Confidence 22 666776521 111111111 23 478999999985 5544 5568898887
Q ss_pred cccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcC------------CeEEEEEecCCCCcceEEcc-CCC---c
Q 037368 162 GDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTP------------NSVILFSLQNQPPKRQFLDN-IGC---S 225 (823)
Q Consensus 162 ~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~------------~~V~~~d~~~~~~~~~~l~~-~~~---~ 225 (823)
.+- ......+.+....+ ..+|++.++|+ +++++. +.|..++..+ .....+.. .|. .
T Consensus 214 ~~~--~~~~~~~~~~~~~g-P~gi~~d~~G~---l~va~~~~~~~~~~~~~~~~v~~~d~~G--~~~~~~~~~~g~~~~~ 285 (322)
T 2fp8_A 214 LEG--PKKGTAEVLVKIPN-PGNIKRNADGH---FWVSSSEELDGNMHGRVDPKGIKFDEFG--NILEVIPLPPPFAGEH 285 (322)
T ss_dssp SSS--TTTTCEEEEEECSS-EEEEEECTTSC---EEEEEEEETTSSTTSCEEEEEEEECTTS--CEEEEEECCTTTTTSC
T ss_pred CCC--CcCCccceEEeCCC-CCCeEECCCCC---EEEEecCcccccccCCCccEEEEECCCC--CEEEEEECCCCCcccc
Confidence 531 01112222322234 67899988883 555542 2467776543 23344432 221 2
Q ss_pred cceecccCCCeEEEee--CCeEEEEecCCCCc
Q 037368 226 TNSVAMSDRLELIIGR--PEAVYFYEVDGRGP 255 (823)
Q Consensus 226 ~~~~~~s~~~~liv~~--~~~I~i~~~~g~~~ 255 (823)
+.++++ .++++.++. .+.|..+++..+.+
T Consensus 286 ~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~~ 316 (322)
T 2fp8_A 286 FEQIQE-HDGLLYIGTLFHGSVGILVYDKKGN 316 (322)
T ss_dssp CCEEEE-ETTEEEEECSSCSEEEEEEC-----
T ss_pred ceEEEE-eCCEEEEeecCCCceEEEecccccC
Confidence 333444 577777763 46888888775544
No 252
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.70 E-value=0.6 Score=49.02 Aligned_cols=220 Identities=9% Similarity=-0.046 Sum_probs=125.7
Q ss_pred CCEEEEEecCCeEEEEcCCCe---eeEeEeecccceeEEEEecCCC-EEEEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 35 RGKVVIGCDDGAVSLLDRGLK---FNFGFQAHSSSVLFLQQLKQRN-FLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 35 ~~~l~~gs~dG~i~~~d~~~~---~~~~~~~H~~~V~~i~~~~~~~-~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
..+|+++. ...|+.++.++. ...... .-..+..+.|++.++ +..+=...+. |..+++....
T Consensus 4 ~p~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~---------I~r~~~~g~~---- 68 (318)
T 3sov_A 4 APLLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEA---------IKRTEFNKTE---- 68 (318)
T ss_dssp CCEEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTE---------EEEEETTSSS----
T ss_pred ccEEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCc---------EEEEEccCCC----
Confidence 34666664 567888884332 111122 224567889988544 4455444454 8888887421
Q ss_pred CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcceEEEee
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMGLGFRV 189 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~l~fs~ 189 (823)
.... .+. ..... +..+|+++.+.. -..+-..++.|.+++.+ +...+++. ..-..-.+|++.|
T Consensus 69 ---~~~~--~~~-~~l~~----p~glavd~~~g~--ly~~d~~~~~I~~~~~d-----G~~~~~l~~~~~~~P~giavdp 131 (318)
T 3sov_A 69 ---SVQN--VVV-SGLLS----PDGLACDWLGEK--LYWTDSETNRIEVSNLD-----GSLRKVLFWQELDQPRAIALDP 131 (318)
T ss_dssp ---CCCE--EEE-ECCSC----CCEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECSSCSSEEEEEEEG
T ss_pred ---ceEE--EEc-CCCCC----ccEEEEEcCCCe--EEEEECCCCEEEEEECC-----CCcEEEEEeCCCCCccEEEEeC
Confidence 1111 111 11112 578999975443 04444456788887653 22223333 3334567999998
Q ss_pred cCCeEEEEEEcC---CeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcccccc---
Q 037368 190 DGQALQLFAVTP---NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAFE--- 260 (823)
Q Consensus 190 dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~~--- 260 (823)
.+ ..||++.. ..|..+++++.. ........-..++.++++| ++++.++- .+.|+.++.+|.......+
T Consensus 132 ~~--g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~ 208 (318)
T 3sov_A 132 SS--GFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSL 208 (318)
T ss_dssp GG--TEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCC
T ss_pred CC--CEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCC
Confidence 64 26777762 468888887643 2222222223467789997 56666653 3689999988765432222
Q ss_pred CCeEEEEeeCcEEEEEEecCCCCccEEEEEeCC
Q 037368 261 GEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 261 g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+++..++.+++++..... ..+.|..+|..
T Consensus 209 ~~P~glav~~~~lywtd~----~~~~V~~~~~~ 237 (318)
T 3sov_A 209 PHPFALTLFEDILYWTDW----STHSILACNKY 237 (318)
T ss_dssp SCEEEEEEETTEEEEEET----TTTEEEEEETT
T ss_pred CCceEEEEeCCEEEEEec----CCCeEEEEECC
Confidence 347778888777665532 34678888774
No 253
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.69 E-value=0.17 Score=59.54 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=25.3
Q ss_pred eCCCEEEEEecCCeEEEEc-CCCeeeEeEee
Q 037368 33 SGRGKVVIGCDDGAVSLLD-RGLKFNFGFQA 62 (823)
Q Consensus 33 ~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~ 62 (823)
..++.+++|+.||.|.-+| .+|+.+.++..
T Consensus 119 ~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 119 VWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 4568899999999999999 78998877664
No 254
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.67 E-value=0.46 Score=56.54 Aligned_cols=231 Identities=9% Similarity=-0.047 Sum_probs=129.3
Q ss_pred eEEEeeCC-CEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCC-EEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSSGR-GKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRN-FLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~~~-~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~-~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
-+|...+. .+|+++ ....|+..+..+.....+......+..|++++.++ +.+|-...+. |..+++...
T Consensus 387 ~~C~~~~~~p~Ll~a-n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~---------I~~~~l~g~ 456 (791)
T 3m0c_C 387 KACKAVGSIAYLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM---------ICSTQLDRA 456 (791)
T ss_dssp CCCEETTSCCEEEEE-CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTE---------EEEEEC---
T ss_pred ceeeecccccccccc-cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecccee---------EEEEeccCC
Confidence 34555443 355554 44567777743332223434446778899998544 4455555554 888888742
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcce
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMG 184 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~ 184 (823)
.. .+.. ...+. ... ..+..+|+++.+.. -+.+-..++.|.+.+.+ +...+++. ..-....+
T Consensus 457 ~~----~~~~--~~vi~-~~l----~~P~GLAvD~~~~~--LY~tD~~~~~I~v~~ld-----G~~~~~l~~~~l~~P~g 518 (791)
T 3m0c_C 457 HG----VSSY--DTVIS-RDI----QAPDGLAVDWIHSN--IYWTDSVLGTVSVADTK-----GVKRKTLFRENGSKPRA 518 (791)
T ss_dssp ---------C--EEEEC-SSC----SCCCEEEEETTTTE--EEEEETTTTEEEEEETT-----SSSEEEEEECTTCCEEE
T ss_pred CC----Ccce--eEEEe-cCC----CCcceeeeeecCCc--EEEEecCCCeEEEEeCC-----CCeEEEEEeCCCCCcce
Confidence 10 0011 11111 011 12578999987644 04444556788877653 22333343 23345789
Q ss_pred EEEeecCCeEEEEEEcC---CeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcccc
Q 037368 185 LGFRVDGQALQLFAVTP---NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWA 258 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~---~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~ 258 (823)
|++.|.+ ..|||+.. ..|...++++.. ...+....-..++.+++++ ++++.++- .+.|..++++|......
T Consensus 519 IaVDp~~--g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 519 IVVDPVH--GFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEETTT--TEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEEecCC--CCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 9999875 26888853 458888887643 2222332224567788885 66666653 35898999887654322
Q ss_pred cc-----CCeEEEEeeCcEEEEEEecCCCCccEEEEEeCC
Q 037368 259 FE-----GEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 259 ~~-----g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+. .++..|+.++++|..+.. ..+.|...|..
T Consensus 596 ~~~~~~l~~P~glav~~~~lYwtD~----~~~~I~~~dk~ 631 (791)
T 3m0c_C 596 LEDEKRLAHPFSLAVFEDKVFWTDI----INEAIFSANRL 631 (791)
T ss_dssp EECTTTTSSEEEEEEETTEEEEEET----TTTEEEEEETT
T ss_pred ecCCCccCCCCEEEEeCCEEEEEEC----CCCEEEEEeCC
Confidence 22 146678888887766543 23567666643
No 255
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.66 E-value=0.24 Score=53.07 Aligned_cols=250 Identities=14% Similarity=0.102 Sum_probs=135.2
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH------HHHhhchhhHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV------IQKFLDAQRIY 410 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v------I~kFl~~~~~~ 410 (823)
..+...++++.|....+.. ...+ .....+...|.-++..|+|++|...|-+.+. ++|..+ ..-+...++.+
T Consensus 41 ~~~~~~~~~~~a~~~~~~a~~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~~~~g~~~ 118 (388)
T 1w3b_A 41 SIHFQCRRLDRSAHFSTLAIKQNP-LLAEAYSNLGNVYKERGQLQEAIEHYRHALR-LKPDFIDGYINLAAALVAAGDME 118 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCC-CchHHHHHHHHHHHHCCCHHHHHHHHHHHHH-cCcchHHHHHHHHHHHHHcCCHH
Confidence 4556789999999887652 1111 1234566778888999999999999988753 333221 12223333333
Q ss_pred -HHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh----HHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHH
Q 037368 411 -NLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK----LNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKK 485 (823)
Q Consensus 411 -~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~----l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~ 485 (823)
++..|-..+ .....+......+-.+|.++++.+. +.+.++..+ ....-....-.++...|.+++|+...++
T Consensus 119 ~A~~~~~~al-~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 194 (388)
T 1w3b_A 119 GAVQAYVSAL-QYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP---NFAVAWSNLGCVFNAQGEIWLAIHHFEK 194 (388)
T ss_dssp HHHHHHHHHH-HHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 333333333 2233333334456667777777543 444444333 1100112233456677888887777664
Q ss_pred ----hCChHHH---HHHHHHhhcCHHHHHHHHhc---CChHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHhhcCCCCccc
Q 037368 486 ----AGKHELY---LKILLEDLGRYDEALQYISS---LDPSQAGVTVKEYGKILI-EHKPMETIDILLRLCTEDGESTKR 554 (823)
Q Consensus 486 ----~~~~~~~---l~il~~~~~~~~~al~yl~~---l~~~~~~~~i~k~~~~Ll-~~~p~~~~~ll~~~~~~~~~~~~~ 554 (823)
...+..+ +.......+++++|+.++.+ +.+.+ .......|..+. ....+++++.+.+.....
T Consensus 195 al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------ 267 (388)
T 1w3b_A 195 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNH-AVVHGNLACVYYEQGLIDLAIDTYRRAIELQ------ 267 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC------
T ss_pred HHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------
Confidence 1222221 22233345899999988875 23322 122333343333 345677777776654321
Q ss_pred CCCCCcccCCCCCHHHH---Hhhh--ccCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccc
Q 037368 555 GASSSTYMSMLPSPVDF---LNIF--VHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSY 613 (823)
Q Consensus 555 ~~~~~~~~~~~~~~~~~---~~~f--~~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~ 613 (823)
+-++..+ ...+ .+..+..+.+++..+...+. ....++.+..+|...
T Consensus 268 ----------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~ 318 (388)
T 1w3b_A 268 ----------PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT---HADSLNNLANIKREQ 318 (388)
T ss_dssp ----------SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHTT
T ss_pred ----------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc---cHHHHHHHHHHHHHc
Confidence 1123221 1122 24667788888888887653 356777788887664
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.66 E-value=0.12 Score=61.48 Aligned_cols=196 Identities=7% Similarity=-0.037 Sum_probs=104.2
Q ss_pred ceeEEEEe-cCCCEEEEEec-CCCCcccccceeEEEEeCCCC-CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 66 SVLFLQQL-KQRNFLVTVGE-DEQVSAQQSAVCLKVFDLDKM-EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 66 ~V~~i~~~-~~~~~l~s~s~-D~~~~~~~~~~~vkvWdl~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
.+...+++ |+|++||-+.+ +|. ... .|.++|+.+. .. .+. .+.. ...+++|+||+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~-~~~----~l~v~dl~~g~~~------l~~---~~~~--------~~~~~~WspDg 232 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGN-EVY----TIEFKRISDPSQT------IAD---KVSG--------TNGEIVWGPDH 232 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSS-SCE----EEEEEETTCTTCC------CCC---CEEE--------ECSCCEECSST
T ss_pred EEeeeEecCCCCCEEEEEEeCCCC-ceE----EEEEEECCCCCEe------CCc---cccC--------ceeeEEEecCC
Confidence 68889999 99998875543 332 111 2999999853 20 011 1110 03467899999
Q ss_pred CCcceEEEEEeCC-----eEEEEEcccccccccceeEEecC--CCCcceEEEeecCCeEEEEEEcC---CeEEEEEecCC
Q 037368 143 PPILLIAIGLDNG-----CIYCIKGDIARERITRFKLQVDN--QCSVMGLGFRVDGQALQLFAVTP---NSVILFSLQNQ 212 (823)
Q Consensus 143 ~~~~~ia~G~~dG-----~V~l~~~~~~~~~~~k~~~~~~~--~~~It~l~fs~dg~~~~l~~~t~---~~V~~~d~~~~ 212 (823)
+. |+....+. .|.+++.. . .......+++. ..-..++.|++||+ .+++.+.. ..|+++|+.+.
T Consensus 233 ~~---l~y~~~d~~~~~~~v~~~~lg--t-~~~~~~lv~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 233 TS---LFYVTKDETLRENKVWRHVMG--K-LQSEDVCLYEEHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TE---EEEEEECTTCCEEEEEEEETT--S-CGGGCEEEEECCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSC
T ss_pred CE---EEEEEECCCCCCCEEEEEECC--C-CchhcEEEEecCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCC
Confidence 88 88877652 34444431 1 11122344432 23456889999996 44444432 35888998753
Q ss_pred CCcc--eEE-ccCCCccceecccCCCeEEEeeC----C--eEEEEecCC--CCcc-ccccCC---eEEEEeeCcEEEEEE
Q 037368 213 PPKR--QFL-DNIGCSTNSVAMSDRLELIIGRP----E--AVYFYEVDG--RGPC-WAFEGE---KKLLGWFRGYLLCVI 277 (823)
Q Consensus 213 ~~~~--~~l-~~~~~~~~~~~~s~~~~liv~~~----~--~I~i~~~~g--~~~~-~~~~g~---~~~i~~~~~ylv~~s 277 (823)
.... +.+ ...........|..++.+++.++ + .|+.++..+ .... +.-++. ...+.+++++++...
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~ 385 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAG 385 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEE
T ss_pred CCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEE
Confidence 2112 333 22222222333334556655422 1 567777652 2122 111221 235677788887765
Q ss_pred ecCCCCccEEEEEeC
Q 037368 278 ADQRNSKNIFNVYDL 292 (823)
Q Consensus 278 ~d~~~~~~~I~I~D~ 292 (823)
... ....|.++|+
T Consensus 386 ~~~--g~~~l~~~dl 398 (751)
T 2xe4_A 386 RRA--GLTRIWTMMA 398 (751)
T ss_dssp EET--TEEEEEEEEC
T ss_pred EeC--CEEEEEEEec
Confidence 431 2356777785
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.60 E-value=0.26 Score=50.04 Aligned_cols=187 Identities=13% Similarity=-0.023 Sum_probs=105.9
Q ss_pred eEEEeeC--CCEEEEEe-cCCeEEEEcCCCeeeEeEeec-ccceeEEEEecCCCE-EEEEecCCCCcccccceeEEEEeC
Q 037368 28 ITCCSSG--RGKVVIGC-DDGAVSLLDRGLKFNFGFQAH-SSSVLFLQQLKQRNF-LVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 28 is~~~~~--~~~l~~gs-~dG~i~~~d~~~~~~~~~~~H-~~~V~~i~~~~~~~~-l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
..+++.. .+.|+.++ ..+.|..++.++.....+... -.....|++++++.. .++-...+. |.++++
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~---------I~~~~~ 108 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR---------IEVAKM 108 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE---------EEEEET
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCE---------EEEEEc
Confidence 3455543 46776554 578999999665543344322 246789999986554 455555554 888888
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-e--CCeEEEEEcccccccccceeEEe-cC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-D--NGCIYCIKGDIARERITRFKLQV-DN 178 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~--dG~V~l~~~~~~~~~~~k~~~~~-~~ 178 (823)
+... ...+. .. .. ..+..++++|++.. +.+.. . ++.|..++.+ +...+.+. ..
T Consensus 109 ~g~~-----------~~~~~-~~-~~--~~P~~i~vd~~~g~---lyv~~~~~~~~~I~~~~~d-----g~~~~~~~~~~ 165 (267)
T 1npe_A 109 DGTQ-----------RRVLF-DT-GL--VNPRGIVTDPVRGN---LYWTDWNRDNPKIETSHMD-----GTNRRILAQDN 165 (267)
T ss_dssp TSCS-----------CEEEE-CS-SC--SSEEEEEEETTTTE---EEEEECCSSSCEEEEEETT-----SCCCEEEECTT
T ss_pred CCCC-----------EEEEE-EC-CC--CCccEEEEeeCCCE---EEEEECCCCCcEEEEEecC-----CCCcEEEEECC
Confidence 6321 11221 11 10 22689999996554 44333 2 4677777643 11222332 22
Q ss_pred CCCcceEEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEe-e-CCeEEEEecC
Q 037368 179 QCSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIG-R-PEAVYFYEVD 251 (823)
Q Consensus 179 ~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~-~-~~~I~i~~~~ 251 (823)
-..-.++++++++. .|+++.. +.|..++..+.. ....+.. ...+..++.. ++.+.++ + ++.|..++..
T Consensus 166 ~~~P~gia~d~~~~--~lyv~d~~~~~I~~~~~~g~~-~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 166 LGLPNGLTFDAFSS--QLCWVDAGTHRAECLNPAQPG-RRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp CSCEEEEEEETTTT--EEEEEETTTTEEEEEETTEEE-EEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCCCcEEEEcCCCC--EEEEEECCCCEEEEEecCCCc-eEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 23467899999763 5777754 469999987532 2222332 2233445543 4555554 3 3588888876
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.55 E-value=0.3 Score=50.82 Aligned_cols=191 Identities=10% Similarity=0.056 Sum_probs=104.4
Q ss_pred eEEEee-CCCEEEEEe-cCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 28 ITCCSS-GRGKVVIGC-DDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 28 is~~~~-~~~~l~~gs-~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
...++. +++.|++++ .+|.|..||.+++....+. ..+.+..|+++++|+++++....+.. .|..++...
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~-------~v~~~d~~~- 104 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSI-------PVVSLVKSD- 104 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSC-------EEEEEECTT-
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcc-------eEEEEcCCC-
Confidence 344444 345566555 7899999997776554333 34578999999999977765433220 033344432
Q ss_pred CCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE--e-------
Q 037368 106 EPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--V------- 176 (823)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~------- 176 (823)
+. +..+...... .....+++.+++.. +++-..+|.|..++.. ..+..+. .
T Consensus 105 -------g~---~~~~~~~~~~---~~~~g~~~~~~~~~---~v~d~~~g~i~~~d~~-----~~~~~v~~~~~~~~~~~ 163 (306)
T 2p4o_A 105 -------GT---VETLLTLPDA---IFLNGITPLSDTQY---LTADSYRGAIWLIDVV-----QPSGSIWLEHPMLARSN 163 (306)
T ss_dssp -------SC---EEEEEECTTC---SCEEEEEESSSSEE---EEEETTTTEEEEEETT-----TTEEEEEEECGGGSCSS
T ss_pred -------Ce---EEEEEeCCCc---cccCcccccCCCcE---EEEECCCCeEEEEeCC-----CCcEeEEEECCcccccc
Confidence 11 1122111100 11355565665544 5554457877777642 0111111 0
Q ss_pred --cCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCC--cceEEccCCCccceecccCCCeEEEee--CCeEEEE
Q 037368 177 --DNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPP--KRQFLDNIGCSTNSVAMSDRLELIIGR--PEAVYFY 248 (823)
Q Consensus 177 --~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~--~~~~l~~~~~~~~~~~~s~~~~liv~~--~~~I~i~ 248 (823)
..-....+| +++++ .|+++. .+.|..|++.+.+. ....+.. ...+..++++++|.+.++. ++.|..+
T Consensus 164 ~~~~~~~pngi--s~dg~--~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 164 SESVFPAANGL--KRFGN--FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRI 238 (306)
T ss_dssp TTCCSCSEEEE--EEETT--EEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEE
T ss_pred ccCCCCcCCCc--CcCCC--EEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEE
Confidence 001123456 77773 566665 35699999874221 1223321 2345667888999887764 4689999
Q ss_pred ecCCC
Q 037368 249 EVDGR 253 (823)
Q Consensus 249 ~~~g~ 253 (823)
+.+|+
T Consensus 239 ~~~G~ 243 (306)
T 2p4o_A 239 APDRS 243 (306)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 98764
No 259
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.52 E-value=0.25 Score=57.97 Aligned_cols=31 Identities=29% Similarity=0.257 Sum_probs=26.5
Q ss_pred eCCCEEEEEecCCeEEEEc-CCCeeeEeEeec
Q 037368 33 SGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAH 63 (823)
Q Consensus 33 ~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H 63 (823)
..++.+++++.||.|..+| .+|+.+.++..+
T Consensus 126 ~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~ 157 (677)
T 1kb0_A 126 LWKGKVYVGAWDGRLIALDAATGKEVWHQNTF 157 (677)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEETT
T ss_pred EECCEEEEEcCCCEEEEEECCCCCEEeeecCC
Confidence 3568999999999999999 789998777765
No 260
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.45 E-value=0.041 Score=59.34 Aligned_cols=65 Identities=6% Similarity=-0.017 Sum_probs=47.0
Q ss_pred EEeeCC-CEEEEEe----------cCCeEEEEc-CCCeeeEeEeecc-------cceeEEEEecCCCEEEEEecC--CCC
Q 037368 30 CCSSGR-GKVVIGC----------DDGAVSLLD-RGLKFNFGFQAHS-------SSVLFLQQLKQRNFLVTVGED--EQV 88 (823)
Q Consensus 30 ~~~~~~-~~l~~gs----------~dG~i~~~d-~~~~~~~~~~~H~-------~~V~~i~~~~~~~~l~s~s~D--~~~ 88 (823)
...+++ ++++++. .++.|.+|| .+++.++++..+. ..-..+.++|+|++|+.+..+ ..
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~- 148 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA- 148 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE-
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe-
Confidence 344444 5677765 478999999 7889988887541 235679999999999887653 33
Q ss_pred cccccceeEEE--EeCC
Q 037368 89 SAQQSAVCLKV--FDLD 103 (823)
Q Consensus 89 ~~~~~~~~vkv--Wdl~ 103 (823)
|.+ +|+.
T Consensus 149 --------v~V~~iD~~ 157 (368)
T 1mda_H 149 --------AGLSVPGAS 157 (368)
T ss_dssp --------EEEEETTTE
T ss_pred --------EEEEEEchh
Confidence 777 8885
No 261
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.39 E-value=0.11 Score=56.93 Aligned_cols=191 Identities=10% Similarity=0.032 Sum_probs=107.0
Q ss_pred CCEE-EEEecCCeEEEEc-CCC----eeeEeEee------cc-cceeEEEEecCCCEEEEEecCCCCc-ccccceeEEEE
Q 037368 35 RGKV-VIGCDDGAVSLLD-RGL----KFNFGFQA------HS-SSVLFLQQLKQRNFLVTVGEDEQVS-AQQSAVCLKVF 100 (823)
Q Consensus 35 ~~~l-~~gs~dG~i~~~d-~~~----~~~~~~~~------H~-~~V~~i~~~~~~~~l~s~s~D~~~~-~~~~~~~vkvW 100 (823)
+++| +.|-.++.|+++| .+. ++.++..+ +. ..-..+.+.|+| +++|+..+..|. +.. |-+.
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~----v~vl 169 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG----ILML 169 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE----EEEE
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCe----EEEE
Confidence 3455 5677899999999 333 56666631 11 134457888999 888876662111 111 8888
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-------------------eCCeEEEEE
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-------------------DNGCIYCIK 161 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-------------------~dG~V~l~~ 161 (823)
|..+. ..++++.... .|..-...+.|+|+++. +++.. .+++|.+|+
T Consensus 170 D~~T~----------~v~~~~~~~~--~~~~~~Yd~~~~p~~~~---mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D 234 (462)
T 2ece_A 170 DHYSF----------EPLGKWEIDR--GDQYLAYDFWWNLPNEV---LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD 234 (462)
T ss_dssp CTTTC----------CEEEECCSBC--TTCCCCCCEEEETTTTE---EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred ECCCC----------eEEEEEccCC--CCccccceEEECCCCCE---EEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence 88743 2555554221 12111345788999887 66652 268999998
Q ss_pred cccccccccceeEEecC-C-CCcceEEE--eecCCeEEEEEEcC-------CeEEEEEecCCC-CcceEE--cc------
Q 037368 162 GDIARERITRFKLQVDN-Q-CSVMGLGF--RVDGQALQLFAVTP-------NSVILFSLQNQP-PKRQFL--DN------ 221 (823)
Q Consensus 162 ~~~~~~~~~k~~~~~~~-~-~~It~l~f--s~dg~~~~l~~~t~-------~~V~~~d~~~~~-~~~~~l--~~------ 221 (823)
.+ .+.....+.-+ . ..-..|.| +|+|+ .+|+++. ++|.+|..++.. ...+++ ..
T Consensus 235 ~~----~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~--~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 235 LR----KRKRIHSLTLGEENRMALELRPLHDPTKL--MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp TT----TTEEEEEEESCTTEEEEEEEEECSSTTCC--EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred CC----CCcEeeEEecCCCCCccceeEeeECCCCC--EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence 64 11111222211 1 12345656 88884 5666553 357766654311 111111 10
Q ss_pred ----------CCCccceecccCCCeEE-Ee-e-CCeEEEEecC
Q 037368 222 ----------IGCSTNSVAMSDRLELI-IG-R-PEAVYFYEVD 251 (823)
Q Consensus 222 ----------~~~~~~~~~~s~~~~li-v~-~-~~~I~i~~~~ 251 (823)
.+..+..+.+|+||+++ ++ + .+.|.+|++.
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 02234557889999865 43 3 3699999985
No 262
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.29 E-value=0.28 Score=55.64 Aligned_cols=183 Identities=11% Similarity=0.110 Sum_probs=100.9
Q ss_pred CCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE-e-cCCCCcceEEEEE
Q 037368 75 QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV-L-EEAPPILLIAIGL 152 (823)
Q Consensus 75 ~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~-~-~d~~~~~~ia~G~ 152 (823)
||++|..+..+++ . |.+-|+... .|.+.+.+-. . ..+..+++ + |++.+ +.++.
T Consensus 100 DG~~lfVnd~~~~----r----VavIdl~t~----------~~~~ii~ip~-g---~~phg~~~~~~p~~~~---v~~~~ 154 (595)
T 1fwx_A 100 DGRFLFMNDKANT----R----VARVRCDVM----------KCDAILEIPN-A---KGIHGLRPQKWPRSNY---VFCNG 154 (595)
T ss_dssp EEEEEEEEETTTT----E----EEEEETTTT----------EEEEEEECSS-C---CSEEEEEECCSSBCSE---EEEEE
T ss_pred CCCEEEEEcCCCC----E----EEEEECCCc----------eEeeEEeCCC-C---CCCcceeeeecCCCcE---EEEec
Confidence 7777765554443 1 888999853 4666554321 1 22788888 5 89888 77774
Q ss_pred ------------------eCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEcCC------------
Q 037368 153 ------------------DNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPN------------ 202 (823)
Q Consensus 153 ------------------~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t~~------------ 202 (823)
.++.|.+++.+- ..-..++... . .-.+++++++|+ .+|+++.+
T Consensus 155 ~~~~p~~~dg~~l~~~~~~~~~vtvID~~t---~~v~~qI~Vg-g-~pd~~~~spdGk--~~~vt~~~se~~~~i~~~~~ 227 (595)
T 1fwx_A 155 EDETPLVNDGTNMEDVANYVNVFTAVDADK---WEVAWQVLVS-G-NLDNCDADYEGK--WAFSTSYNSEKGMTLPEMTA 227 (595)
T ss_dssp CSCEESSCSSSSTTCGGGEEEEEEEEETTT---TEEEEEEEES-S-CCCCEEECSSSS--EEEEEESCTTCCSSHHHHTC
T ss_pred ccccccCCCCcccccccccCceEEEEECCC---CeEEEEEEeC-C-CccceEECCCCC--EEEEEecCcccCcchhhccc
Confidence 244666777641 0001111121 2 347888999984 56666522
Q ss_pred ---------------------------eEEEEEecCC-CCc-ceEEccCCCccceecccCCCeEEEee---CCeEEEEec
Q 037368 203 ---------------------------SVILFSLQNQ-PPK-RQFLDNIGCSTNSVAMSDRLELIIGR---PEAVYFYEV 250 (823)
Q Consensus 203 ---------------------------~V~~~d~~~~-~~~-~~~l~~~~~~~~~~~~s~~~~liv~~---~~~I~i~~~ 250 (823)
+|.+.|.... ... ...+. .+..+.++.++|||+++++. ++.|.+++.
T Consensus 228 ~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~ 306 (595)
T 1fwx_A 228 AEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDV 306 (595)
T ss_dssp CSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEG
T ss_pred cccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEEC
Confidence 2445554431 011 12221 23445678999999976543 368999998
Q ss_pred CCCCc----------cc--ccc-C-CeEEEEeeCc-EEEEEEecCCCCccEEEEEeCCC
Q 037368 251 DGRGP----------CW--AFE-G-EKKLLGWFRG-YLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 251 ~g~~~----------~~--~~~-g-~~~~i~~~~~-ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
..... +. ..+ | -+..++++++ ++.+... -+++|.+||++.
T Consensus 307 ~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~----ldsqV~kwdi~~ 361 (595)
T 1fwx_A 307 TRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLF----LDSQVVKWNIED 361 (595)
T ss_dssp GGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEET----TTTEEEEEEHHH
T ss_pred cccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEe----cCCcEEEEEhhH
Confidence 73210 00 111 1 2455555432 4433332 357899998864
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.16 E-value=0.8 Score=50.36 Aligned_cols=147 Identities=8% Similarity=0.020 Sum_probs=86.1
Q ss_pred CCEEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCCCC
Q 037368 35 RGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSST 113 (823)
Q Consensus 35 ~~~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~ 113 (823)
++.|++++..+.|+.+|.++..+..+.........|+++++|+.| ++-..++. .... +.+.+...
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~-~~~~----v~~~~~~g--------- 214 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNN-DRPN----NYILTRES--------- 214 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCT-TSEE----EEEEEGGG---------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCc-ccce----EEEEeCCC---------
Confidence 467877776688999996554444554444678899999999955 44433332 0000 22223221
Q ss_pred CCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccccccceeEEec--CCCCcceEEEeec
Q 037368 114 SPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD--NQCSVMGLGFRVD 190 (823)
Q Consensus 114 ~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~--~~~~It~l~fs~d 190 (823)
.....+.+..+ .+ +..++++| ++.. +++-..++.|..++.+ +.....+.. ....-.+|+|+++
T Consensus 215 ~~~~~~~l~~~--~~----p~giavdp~~g~l---yv~d~~~~~V~~~~~~-----~~~~~~~~~~~~~~~P~gia~~pd 280 (430)
T 3tc9_A 215 GFKVITELTKG--QN----CNGAETHPINGEL---YFNSWNAGQVFRYDFT-----TQETTPLFTIQDSGWEFHIQFHPS 280 (430)
T ss_dssp TSCSEEEEEEC--SS----CCCEEECTTTCCE---EEEETTTTEEEEEETT-----TTEEEEEEECSSSSCCEEEEECTT
T ss_pred ceeeeeeeccC--CC----ceEEEEeCCCCEE---EEEECCCCEEEEEECC-----CCcEEEEEEcCCCCcceeEEEcCC
Confidence 11111233222 23 58899999 6666 6666678888888753 112212221 1234568999999
Q ss_pred CCeEEEEEEc--CCeEEEEEecC
Q 037368 191 GQALQLFAVT--PNSVILFSLQN 211 (823)
Q Consensus 191 g~~~~l~~~t--~~~V~~~d~~~ 211 (823)
|+ .|+++. .+.|..++.++
T Consensus 281 G~--~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 281 GN--YAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SS--EEEEEETTTTEEEEEEEET
T ss_pred CC--EEEEEECCCCEEEEEeCCc
Confidence 94 566664 35688888764
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.13 E-value=1.6 Score=45.52 Aligned_cols=220 Identities=9% Similarity=-0.068 Sum_probs=124.4
Q ss_pred EEEEEecCCeEEEEcCCC-eeeEeEeecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCCCCCC
Q 037368 37 KVVIGCDDGAVSLLDRGL-KFNFGFQAHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTS 114 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~-~~~~~~~~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~ 114 (823)
+|++++. ..|+..|..+ +.. ..-..-..+..+.+++.++.| ++-..++. |..+++.... .++
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~-~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~---------I~~~~~~g~~-----~~~ 66 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRM---------ICSTQLDRAH-----GVS 66 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCE-EEECSCSSEEEEEEETTTTEEEEEETTTTE---------EEEEEC------------
T ss_pred EEEEECC-CeEEEEECCCcceE-ehhcCCCceEEEEEEeCCCEEEEEECCCCc---------EEEEECCCCC-----CCc
Confidence 4666654 4588888433 333 232334567889999865544 55444554 8888886410 001
Q ss_pred CceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcceEEEeecCCe
Q 037368 115 PDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGFRVDGQA 193 (823)
Q Consensus 115 ~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~fs~dg~~ 193 (823)
...++- .. .. ..+..+|+++.+.. -.++-..++.|.+++.+ +...+++.. .-....++++.|.+
T Consensus 67 --~~~~~~-~~-~~--~~p~glavd~~~~~--ly~~d~~~~~I~~~~~~-----g~~~~~~~~~~~~~P~~iavdp~~-- 131 (316)
T 1ijq_A 67 --SYDTVI-SR-DI--QAPDGLAVDWIHSN--IYWTDSVLGTVSVADTK-----GVKRKTLFRENGSKPRAIVVDPVH-- 131 (316)
T ss_dssp ---CEEEE-CS-SC--SCCCEEEEETTTTE--EEEEETTTTEEEEEETT-----SSSEEEEEECTTCCEEEEEEETTT--
T ss_pred --ccEEEE-eC-CC--CCcCEEEEeecCCe--EEEEECCCCEEEEEeCC-----CCceEEEEECCCCCcceEEeCCCC--
Confidence 111111 11 10 12588999975544 04444557888888753 222333332 33456899998865
Q ss_pred EEEEEEcC---CeEEEEEecCCCCcceEE-ccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCccccc-----cC
Q 037368 194 LQLFAVTP---NSVILFSLQNQPPKRQFL-DNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAF-----EG 261 (823)
Q Consensus 194 ~~l~~~t~---~~V~~~d~~~~~~~~~~l-~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~-----~g 261 (823)
..||++.. .+|..+++++.. ..++ ...-..++.+++++ ++++.++- .+.|..++.+|....... -+
T Consensus 132 g~ly~~d~~~~~~I~~~~~dG~~--~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~ 209 (316)
T 1ijq_A 132 GFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 209 (316)
T ss_dssp TEEEEEECSSSCEEEEEETTSCC--EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTS
T ss_pred CEEEEEccCCCCeEEEEcCCCCC--eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccC
Confidence 25777753 468888887642 2333 22234466788986 45666653 358999998875432111 13
Q ss_pred CeEEEEeeCcEEEEEEecCCCCccEEEEEeCC
Q 037368 262 EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 262 ~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
++..++.+++++..... ..+.|..+|..
T Consensus 210 ~P~giav~~~~ly~~d~----~~~~V~~~~~~ 237 (316)
T 1ijq_A 210 HPFSLAVFEDKVFWTDI----INEAIFSANRL 237 (316)
T ss_dssp SEEEEEEETTEEEEEET----TTTEEEEEETT
T ss_pred CcEEEEEECCEEEEEEC----CCCeEEEEeCC
Confidence 57788888887766543 34678888764
No 265
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.03 E-value=0.88 Score=47.32 Aligned_cols=55 Identities=9% Similarity=0.067 Sum_probs=39.9
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..++..++|+.|++..+.. ...+. ....+...|..++..|+|++|...|-+.+.
T Consensus 10 ~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 65 (359)
T 3ieg_A 10 GKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIA 65 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45677889999999988752 11111 235666778888999999999999887753
No 266
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.02 E-value=1.4 Score=48.45 Aligned_cols=187 Identities=7% Similarity=-0.012 Sum_probs=102.3
Q ss_pred CCEEEEEecCCeEEEEcC-CCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCC
Q 037368 35 RGKVVIGCDDGAVSLLDR-GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSST 113 (823)
Q Consensus 35 ~~~l~~gs~dG~i~~~d~-~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~ 113 (823)
.+.|++++..+.|+.++. ++... ++-.-......|+++++|+++++...... .+. .+...+...
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~--~~~---gv~~~~~~~--------- 216 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSD--TNT---GIYLFTRAS--------- 216 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCT--TSE---EEEEECGGG---------
T ss_pred CCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCc--ccc---eEEEEECCC---------
Confidence 378888877689999995 56654 45444456899999999996666543211 000 021222211
Q ss_pred CCceEEEEEeccCCCCCCceEEEEEec-CCCCcceEEEEEeCCeEEEEEcccccccccce-eEEe-cCCCC-cceEEEee
Q 037368 114 SPDCIGILRVFTSQFPEAKITSFLVLE-EAPPILLIAIGLDNGCIYCIKGDIARERITRF-KLQV-DNQCS-VMGLGFRV 189 (823)
Q Consensus 114 ~~~~~~~~~~~~~~~p~~~v~~va~~~-d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~-~~~~-~~~~~-It~l~fs~ 189 (823)
.......+..+ .. +..++++| ++.. .++-..++.|..++.+ .+ .. ..+. ....+ -.+|+|++
T Consensus 217 ~~~~~~~~~~~--~~----P~giavd~~~G~l---yv~d~~~~~V~~~d~~----~g-~~~~~~~~~~~~~~~~~ia~dp 282 (433)
T 4hw6_A 217 GFTERLSLCNA--RG----AKTCAVHPQNGKI---YYTRYHHAMISSYDPA----TG-TLTEEEVMMDTKGSNFHIVWHP 282 (433)
T ss_dssp TTCCEEEEEEC--SS----BCCCEECTTTCCE---EECBTTCSEEEEECTT----TC-CEEEEEEECSCCSSCEEEEECT
T ss_pred Ceecccccccc--CC----CCEEEEeCCCCeE---EEEECCCCEEEEEECC----CC-eEEEEEeccCCCCCcccEEEeC
Confidence 00001122211 22 57899999 6655 5554557778877643 11 11 1222 22222 34799999
Q ss_pred cCCeEEEEEEcC--CeEEEEEecCCC-C--cceEEccC-C--------------Cccceecc---------cCCCeEEEe
Q 037368 190 DGQALQLFAVTP--NSVILFSLQNQP-P--KRQFLDNI-G--------------CSTNSVAM---------SDRLELIIG 240 (823)
Q Consensus 190 dg~~~~l~~~t~--~~V~~~d~~~~~-~--~~~~l~~~-~--------------~~~~~~~~---------s~~~~liv~ 240 (823)
+|+ .|+++.. +.|+.++.+... . ...++.+. + ..+..+++ .++|.+.++
T Consensus 283 dG~--~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva 360 (433)
T 4hw6_A 283 TGD--WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC 360 (433)
T ss_dssp TSS--EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred CCC--EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE
Confidence 984 5776653 468888875321 1 11222111 1 11334677 677777765
Q ss_pred e--CCeEEEEecCC
Q 037368 241 R--PEAVYFYEVDG 252 (823)
Q Consensus 241 ~--~~~I~i~~~~g 252 (823)
- .+.|+.++.+|
T Consensus 361 D~~n~~I~~~~~~G 374 (433)
T 4hw6_A 361 DRDSHTVRVLTPEG 374 (433)
T ss_dssp ETTTTEEEEECTTS
T ss_pred ECCCCEEEEECCCC
Confidence 3 35788887654
No 267
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.01 E-value=1.2 Score=46.37 Aligned_cols=250 Identities=14% Similarity=0.155 Sum_probs=140.0
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcCh---HHH-------------
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP---SYV------------- 399 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~ep---s~v------------- 399 (823)
-..+...++|+.|++..+.. ...+. ....+...|..++..|+|++|...|-+.+.. .| ...
T Consensus 44 a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~ 121 (359)
T 3ieg_A 44 ATVFLAMGKSKAALPDLTKVIALKMD-FTAARLQRGHLLLKQGKLDEAEDDFKKVLKS-NPSEQEEKEAESQLVKADEMQ 121 (359)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCC-cchHHHHHHHHHHHcCChHHHHHHHHHHHhc-CCcccChHHHHHHHHHHHHHH
Confidence 45667889999999988762 11111 2356777899999999999999999988653 33 211
Q ss_pred -----HHHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh----HHHhhcCCCCCCcccCCHHHHHHHH
Q 037368 400 -----IQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK----LNMFIKGEDGVGEHKFDVETAIRVC 470 (823)
Q Consensus 400 -----I~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~----l~~fi~~~~~~~~~~~d~~~ai~vl 470 (823)
...+...++.+.-..++.........+..-...+..+|.++++.+. +.+.++..+ ....-.-..-.++
T Consensus 122 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---~~~~~~~~la~~~ 198 (359)
T 3ieg_A 122 RLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKS---DNTEAFYKISTLY 198 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS---CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHH
Confidence 1222334445555555555444444444545556778888887543 444444432 1100112233445
Q ss_pred HhcCCHHHHHHHHHH----hCChHHHH----------------HHHHHhhcCHHHHHHHHhcC---ChHH---HHHHHHH
Q 037368 471 RAANYHEHAMYVAKK----AGKHELYL----------------KILLEDLGRYDEALQYISSL---DPSQ---AGVTVKE 524 (823)
Q Consensus 471 ~~~g~~~~a~~la~~----~~~~~~~l----------------~il~~~~~~~~~al~yl~~l---~~~~---~~~~i~k 524 (823)
...|.+++|+...++ ...+.... .++.. .+++++|++++.+. .+.+ ....+..
T Consensus 199 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 277 (359)
T 3ieg_A 199 YQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR-DGRYTDATSKYESVMKTEPSVAEYTVRSKER 277 (359)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 567788877776653 23333321 22333 48999999988863 1111 1122333
Q ss_pred HHHHHH-hcCCHHHHHHHHHHhhcCCCCcccCCCCCcccCCCCCHHHHH---hhh--ccCcHHHHHHHHHHHhhcCCCCc
Q 037368 525 YGKILI-EHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVDFL---NIF--VHHPESLMDFLEKYTNKVKDSPA 598 (823)
Q Consensus 525 ~~~~Ll-~~~p~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~f--~~~~~~~~~yLe~~i~~~~~~~~ 598 (823)
.|..+. ...++++++.+.+..... +-++..+. .++ .+..+....+++.+++..++.
T Consensus 278 la~~~~~~~~~~~A~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~-- 339 (359)
T 3ieg_A 278 ICHCFSKDEKPVEAIRICSEVLQME----------------PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND-- 339 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC----------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC--
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhC----------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--
Confidence 443333 445677777776654321 11232211 111 246778888899988876543
Q ss_pred hhhHHHHHHHHhc
Q 037368 599 QVEIHNTLLELYL 611 (823)
Q Consensus 599 ~~~~~n~llelyl 611 (823)
...+..|..++.
T Consensus 340 -~~~~~~l~~~~~ 351 (359)
T 3ieg_A 340 -QQIREGLEKAQR 351 (359)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHH
Confidence 455666655553
No 268
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.94 E-value=0.82 Score=49.75 Aligned_cols=220 Identities=15% Similarity=0.172 Sum_probs=103.9
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH---------------------HHHhhchhhHHHHHHHHHHHHHcCC
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV---------------------IQKFLDAQRIYNLTNYLEKLHEKGF 424 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v---------------------I~kFl~~~~~~~L~~YL~~l~~~~~ 424 (823)
.+...|..+...|+|++|...|-+.+.. .|... ...+...++...-..++........
T Consensus 96 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 96 ARLQRGHLLLKQGKLDEAEDDFKKVLKS-NPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV 174 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3444455556666666666666555432 22111 0112233333333344444333333
Q ss_pred CChhHHHHHHHHHHhcCChh----hHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHH----hCChHHH----
Q 037368 425 ASKDHTTLLLNCYTKLKDVE----KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKK----AGKHELY---- 492 (823)
Q Consensus 425 ~~~~~~~lLl~~y~kl~~~~----~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~----~~~~~~~---- 492 (823)
.+......+..+|.++++.+ .+.+.++..+ ....-......++...|.+++|+.+.++ .+.+..+
T Consensus 175 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~ 251 (450)
T 2y4t_A 175 WDAELRELRAECFIKEGEPRKAISDLKAASKLKN---DNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY 251 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC---SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 33444445666777776643 2334433322 1011122334456677777777766653 2333332
Q ss_pred ------------HHHHHHhhcCHHHHHHHHhcC---ChHH---HHHHHHHHHHHHHh-cCCHHHHHHHHHHhhcCCCCcc
Q 037368 493 ------------LKILLEDLGRYDEALQYISSL---DPSQ---AGVTVKEYGKILIE-HKPMETIDILLRLCTEDGESTK 553 (823)
Q Consensus 493 ------------l~il~~~~~~~~~al~yl~~l---~~~~---~~~~i~k~~~~Ll~-~~p~~~~~ll~~~~~~~~~~~~ 553 (823)
...+.. .+++++|++++.+. .+.+ ....+...|..+.. ...+++++.+.+...-.
T Consensus 252 ~~~~~~~~~~~~~~~~~~-~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~----- 325 (450)
T 2y4t_A 252 KQVKKLNKLIESAEELIR-DGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME----- 325 (450)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----
Confidence 223333 38888888888763 1111 12233334443333 34566776665543211
Q ss_pred cCCCCCcccCCCCCHHHHH---hhh--ccCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHH
Q 037368 554 RGASSSTYMSMLPSPVDFL---NIF--VHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLEL 609 (823)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~---~~f--~~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llel 609 (823)
+.++.... .++ .++.+..+.+++.+++..++. ...+..+-.+
T Consensus 326 -----------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~ 372 (450)
T 2y4t_A 326 -----------PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND---QQIREGLEKA 372 (450)
T ss_dssp -----------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC---HHHHHHHHHH
T ss_pred -----------cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch---HHHHHHHHHH
Confidence 11222211 111 235677888888888766542 4555555433
No 269
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.93 E-value=1.2 Score=45.44 Aligned_cols=183 Identities=10% Similarity=0.021 Sum_probs=106.6
Q ss_pred EEEeeCC-CEEEEEec---CCeEEEEc-CCCeeeEeEeecc-cceeEEEEecCCCEEEEEe-cCCCCcccccceeEEEEe
Q 037368 29 TCCSSGR-GKVVIGCD---DGAVSLLD-RGLKFNFGFQAHS-SSVLFLQQLKQRNFLVTVG-EDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 29 s~~~~~~-~~l~~gs~---dG~i~~~d-~~~~~~~~~~~H~-~~V~~i~~~~~~~~l~s~s-~D~~~~~~~~~~~vkvWd 101 (823)
..++.++ +.|+.++. ++.|+++| .+++.++++.--. .....+.++ ++.|..+. .+++ +-++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~---------v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI---------GFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE---------EEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE---------EEEEE
Confidence 3455544 78877764 58999999 7888887765321 223345554 45555444 4454 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe--cCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV--DNQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~--~~~ 179 (823)
..+. ..++++... .| ....+++|+.. +.+...+++|.+++..- ..-...+. ...
T Consensus 93 ~~t~----------~v~~~i~~g---~~----~g~glt~Dg~~---l~vs~gs~~l~viD~~t----~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 93 RRTL----------SNIKNFTHQ---MK----DGWGLATDGKI---LYGSDGTSILYEIDPHT----FKLIKKHNVKYNG 148 (266)
T ss_dssp TTTT----------EEEEEEECC---SS----SCCEEEECSSS---EEEECSSSEEEEECTTT----CCEEEEEECEETT
T ss_pred CCCC----------cEEEEEECC---CC----CeEEEEECCCE---EEEECCCCeEEEEECCC----CcEEEEEEECCCC
Confidence 8743 356666532 12 11346668877 77666678888887531 11111221 112
Q ss_pred CC---cceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccC-------------CCccceecccCCC-eEEEe
Q 037368 180 CS---VMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNI-------------GCSTNSVAMSDRL-ELIIG 240 (823)
Q Consensus 180 ~~---It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~-------------~~~~~~~~~s~~~-~liv~ 240 (823)
.| ...+.|. +| .+|++. .+.|.+.|..+.. ....++-. ...++.++++|++ ++.++
T Consensus 149 ~p~~~~nele~~-dg---~lyvn~~~~~~V~vID~~tg~-V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 149 HRVIRLNELEYI-NG---EVWANIWQTDCIARISAKDGT-LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp EECCCEEEEEEE-TT---EEEEEETTSSEEEEEETTTCC-EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred cccccceeEEEE-CC---EEEEecCCCCeEEEEECCCCc-EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 23 5578887 66 466665 4679999987543 33333211 1245678999876 45554
Q ss_pred eC--CeEEEEecC
Q 037368 241 RP--EAVYFYEVD 251 (823)
Q Consensus 241 ~~--~~I~i~~~~ 251 (823)
+. +.++..++.
T Consensus 224 gk~~~~v~~i~l~ 236 (266)
T 2iwa_A 224 GKLWPKLFEIKLH 236 (266)
T ss_dssp ETTCSEEEEEEEE
T ss_pred CCCCCeEEEEEEe
Confidence 43 567666654
No 270
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.88 E-value=0.22 Score=58.44 Aligned_cols=63 Identities=13% Similarity=0.246 Sum_probs=43.8
Q ss_pred CCCEEEEEecCC-------------------eEEEEc-CCCeeeEeEee--cc-------cceeEEEEecCC---CEEEE
Q 037368 34 GRGKVVIGCDDG-------------------AVSLLD-RGLKFNFGFQA--HS-------SSVLFLQQLKQR---NFLVT 81 (823)
Q Consensus 34 ~~~~l~~gs~dG-------------------~i~~~d-~~~~~~~~~~~--H~-------~~V~~i~~~~~~---~~l~s 81 (823)
..+.+++++.++ .|..+| .+|+.+..|+. |. .....+....+| ..++.
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 357888888775 599999 77998877764 31 122223333467 67888
Q ss_pred EecCCCCcccccceeEEEEeCCCC
Q 037368 82 VGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 82 ~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
++.+|. |.++|..+.
T Consensus 333 ~~~~G~---------l~~lD~~tG 347 (677)
T 1kb0_A 333 APKNGF---------FFVLDRTNG 347 (677)
T ss_dssp CCTTSE---------EEEEETTTC
T ss_pred ECCCCE---------EEEEECCCC
Confidence 888887 999998743
No 271
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.82 E-value=2 Score=44.10 Aligned_cols=234 Identities=10% Similarity=0.109 Sum_probs=131.5
Q ss_pred HHHHHHHhccHHHHHHHHHh-cCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH------HHHhhchhh
Q 037368 336 KLDMLFKKNLYTVAINLVQS-QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV------IQKFLDAQR 408 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~-~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v------I~kFl~~~~ 408 (823)
.|+-++-.|+|..|++.++. ...+++...+.....+..++..|+|++|..++-. ..|..+ ..-+...++
T Consensus 5 ~~~~~~~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~----~~~~~~~a~~~la~~~~~~~~ 80 (291)
T 3mkr_A 5 DVKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKP----SSAPELQAVRMFAEYLASHSR 80 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT----TSCHHHHHHHHHHHHHHCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc----cCChhHHHHHHHHHHHcCCCc
Confidence 46677888999999999976 3455555445555567789999999999987633 133222 112233444
Q ss_pred HHHHHHHHHHHHHcC--CCChhHHHHHHHHHHhcCChhhHHHhhcCCCCCCcccCC-HHHHHHHHHhcCCHHHHHHHHHH
Q 037368 409 IYNLTNYLEKLHEKG--FASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFD-VETAIRVCRAANYHEHAMYVAKK 485 (823)
Q Consensus 409 ~~~L~~YL~~l~~~~--~~~~~~~~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d-~~~ai~vl~~~g~~~~a~~la~~ 485 (823)
.+.-+.-|+.+...+ ..+......+-..|.+.++.+.=.+.+..+. ..+ .-....++.+.|++++|....++
T Consensus 81 ~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~~~-----~~~~~~~l~~~~~~~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 81 RDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGD-----SLECMAMTVQILLKLDRLDLARKELKK 155 (291)
T ss_dssp HHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTTCC-----SHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCC-----CHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 555555566654433 2234334445567778787766555655532 111 22334567788888888776654
Q ss_pred h----CChHH------HHHHHHHhhcCHHHHHHHHhcC---ChHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHhhcCCCC
Q 037368 486 A----GKHEL------YLKILLEDLGRYDEALQYISSL---DPSQAGVTVKEYGKILI-EHKPMETIDILLRLCTEDGES 551 (823)
Q Consensus 486 ~----~~~~~------~l~il~~~~~~~~~al~yl~~l---~~~~~~~~i~k~~~~Ll-~~~p~~~~~ll~~~~~~~~~~ 551 (823)
. .++.. ++.++.. .+++++|+.++.++ .+.+ ..++..-|..++ ....+++.+.+.+.....
T Consensus 156 ~~~~~p~~~~~~l~~a~~~l~~~-~~~~~eA~~~~~~~l~~~p~~-~~~~~~la~~~~~~g~~~eA~~~l~~al~~~--- 230 (291)
T 3mkr_A 156 MQDQDEDATLTQLATAWVSLAAG-GEKLQDAYYIFQEMADKCSPT-LLLLNGQAACHMAQGRWEAAEGVLQEALDKD--- 230 (291)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHC-TTHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---
T ss_pred HHhhCcCcHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Confidence 2 22211 1222222 27888888888764 2222 233444443333 335667777776654321
Q ss_pred cccCCCCCcccCCCCCHHHHHhh-----hccCc-HHHHHHHHHHHhhcCCC
Q 037368 552 TKRGASSSTYMSMLPSPVDFLNI-----FVHHP-ESLMDFLEKYTNKVKDS 596 (823)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~-----f~~~~-~~~~~yLe~~i~~~~~~ 596 (823)
+-+|..+... ..+.+ +.+..|++.++...|+.
T Consensus 231 -------------p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 231 -------------SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp -------------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred -------------CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 2234332221 12334 34678888888877654
No 272
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=95.79 E-value=0.0011 Score=57.35 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=75.2
Q ss_pred HHHhccHHHHHHHHHhcCChhHHHHHHHHhCCCCCCCCcchHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCCChHHHHH
Q 037368 705 YEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQ 784 (823)
Q Consensus 705 ~~k~g~~~~al~~~~~~~d~~~~i~~~~~~~~~~~~~~~~Lw~~ll~~~~~~~~~~~~~i~~~L~~i~~~~~l~p~~vl~ 784 (823)
|.|-+.|.+++.+.-+.+..+.||+.+..-+ ++++=..||+||+...+ .+++...|= ...++|.|..|++
T Consensus 16 ykkN~rw~qSI~L~KkDkLykDAietAa~S~------d~elaEeLL~yFVe~g~--kEcF~A~Ly--tCYdLlrpDvVLE 85 (125)
T 3qil_A 16 PRGSHMWKQSVELAKKDSLYKDAMQYASESK------DTELAEELLQWFLQEEK--RECFGACLF--TCYDLLRPDVVLE 85 (125)
T ss_dssp SSSCCCCSSCCCCCSCCCCSSHHHHTTTSSC------CSHHHHHHHHHHTTSCS--HHHHHHHHH--HHTTCSCTTHHHH
T ss_pred hhccccHHHHHHHHHhcccHHHHHHHHHHcC------CHHHHHHHHHHHHHcCc--hHHHHHHHH--HHHhccChHHHHH
Confidence 4445555555555544455666676665543 56788889999998764 456666555 4566999999999
Q ss_pred HhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037368 785 TLSRNPCLTLSVIKDYIARKLEQESKLIEGDRRAIE 820 (823)
Q Consensus 785 ~l~~~~~~~~~~vk~~l~~~l~~~~~~i~~~~~~i~ 820 (823)
+-=++.-.. .+.+|++..++++..+|+++++..+
T Consensus 86 laWr~~l~D--f~mPY~Iqv~re~~~kv~~L~~~~~ 119 (125)
T 3qil_A 86 LAWRHNIMD--FAMPYFIQVMKEYLTKVDKLDASES 119 (125)
T ss_dssp TTSSSSCCC--CCCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcccc--ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 987666644 4889999999999999999987654
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.78 E-value=0.95 Score=48.16 Aligned_cols=180 Identities=12% Similarity=-0.024 Sum_probs=98.1
Q ss_pred CCEEEEEe-cCCeEEEEcCCCeeeEeEeec-ccceeEEEEecC-CCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCC
Q 037368 35 RGKVVIGC-DDGAVSLLDRGLKFNFGFQAH-SSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTS 111 (823)
Q Consensus 35 ~~~l~~gs-~dG~i~~~d~~~~~~~~~~~H-~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~ 111 (823)
.+.|+..+ ..+.|+.++.++.....+-.. ......|++++. +++.++-+..+. |.+.+++...
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~---------I~~~~~dG~~----- 149 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR---------IEVANLDGAH----- 149 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTE---------EEEEETTSCS-----
T ss_pred ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCe---------EEEEcCCCCc-----
Confidence 45665544 567788888555433333322 245678999874 455566555555 8888887421
Q ss_pred CCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeC-CeEEEEEcccccccccceeEEec-CCCCcceEEEee
Q 037368 112 STSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDN-GCIYCIKGDIARERITRFKLQVD-NQCSVMGLGFRV 189 (823)
Q Consensus 112 ~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~d-G~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~fs~ 189 (823)
...+- .... ..+..++++|++.. -+.+-..+ +.|..++.+ +...+++.. .-..-.+|+|++
T Consensus 150 ------~~~l~-~~~l---~~P~~iavdp~~g~--ly~td~~~~~~I~r~~~d-----G~~~~~~~~~~~~~PnGla~d~ 212 (349)
T 3v64_C 150 ------RKVLL-WQSL---EKPRAIALHPMEGT--IYWTDWGNTPRIEASSMD-----GSGRRIIADTHLFWPNGLTIDY 212 (349)
T ss_dssp ------CEEEE-CTTC---SCEEEEEEETTTTE--EEEEECSSSCEEEEEETT-----SCSCEESCCSSCSCEEEEEEET
T ss_pred ------eEEEE-eCCC---CCcceEEEecCcCe--EEEeccCCCCEEEEEeCC-----CCCcEEEEECCCCCcceEEEeC
Confidence 11221 1111 22799999996554 03333334 667666543 222223322 223457999998
Q ss_pred cCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEe-eC-CeEEEEe
Q 037368 190 DGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIG-RP-EAVYFYE 249 (823)
Q Consensus 190 dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~-~~-~~I~i~~ 249 (823)
++ ..||++.. +.|..+++++.. ...++......+..+++ .++.+.++ +. +.|..++
T Consensus 213 ~~--~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 213 AG--RRMYWVDAKHHVIERANLDGSH-RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp TT--TEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CC--CEEEEEECCCCEEEEEeCCCCc-eEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 66 36787753 469999987643 22233322233445555 34454443 33 4676666
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.76 E-value=1.9 Score=43.45 Aligned_cols=201 Identities=11% Similarity=0.102 Sum_probs=115.0
Q ss_pred CCeEEEeeC--CCEE-EEEecCCeEEEEcCCCeeeEeEeec-ccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 26 GNITCCSSG--RGKV-VIGCDDGAVSLLDRGLKFNFGFQAH-SSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 26 ~~is~~~~~--~~~l-~~gs~dG~i~~~d~~~~~~~~~~~H-~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
.+++.++.. ++.| ++...++.|..+|.+++.++++.-- ....-.|++.+++.++++.-.++. +.+++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~---------l~~~~ 97 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYA---------IYVIS 97 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTE---------EEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCc---------EEEEE
Confidence 468888875 3555 5677899999999779888777432 146778888888876665433333 77777
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCC-CCceEEEEEecCCCCcceEEEEEeCCeEEEEEcc-cccccccceeEEec--
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFP-EAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGD-IARERITRFKLQVD-- 177 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~-~~~~~~~k~~~~~~-- 177 (823)
+.... ....+...+..-...| ....-.+|++|+++. +.++...+...+|..+ +.+. ....++..
T Consensus 98 v~~~~-------~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~---L~va~E~~p~~i~~~~g~~~~--~~l~i~~~~~ 165 (255)
T 3qqz_A 98 LTPNS-------EVKILKKIKIPLQESPTNCGFEGLAYSRQDHT---FWFFKEKNPIEVYKVNGLLSS--NELHISKDKA 165 (255)
T ss_dssp ECTTC-------CEEEEEEEECCCSSCCCSSCCEEEEEETTTTE---EEEEEESSSEEEEEEESTTCS--SCCEEEECHH
T ss_pred cCCCC-------eeeeeeeeccccccccccCCcceEEEeCCCCE---EEEEECcCCceEEEEcccccC--Cceeeecchh
Confidence 76321 1111233321100111 233789999999877 6666666555555432 1111 11122211
Q ss_pred -----CCCCcceEEEeecCCeEEEEEEcCC-eEEEEEecCCCCcceEEc-cCC--------CccceecccCCCeEEEeeC
Q 037368 178 -----NQCSVMGLGFRVDGQALQLFAVTPN-SVILFSLQNQPPKRQFLD-NIG--------CSTNSVAMSDRLELIIGRP 242 (823)
Q Consensus 178 -----~~~~It~l~fs~dg~~~~l~~~t~~-~V~~~d~~~~~~~~~~l~-~~~--------~~~~~~~~s~~~~liv~~~ 242 (823)
.-..+-+|+|.|... .+++.+..+ .+..+|..++ +...+. ..| ..+.-++|.++|.+.+++.
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg-~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKN-TLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTT-EEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred hccccccCCceeEEEcCCCC-eEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 112457899988653 333333333 4778887664 333332 111 2456789999999777664
Q ss_pred -CeEEEEec
Q 037368 243 -EAVYFYEV 250 (823)
Q Consensus 243 -~~I~i~~~ 250 (823)
+-++.+..
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 55566654
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.67 E-value=0.87 Score=49.24 Aligned_cols=186 Identities=11% Similarity=-0.035 Sum_probs=100.5
Q ss_pred eEEEeeC--CCEEEEEe-cCCeEEEEcCCCeeeEeEeec-ccceeEEEEecCC-CEEEEEecCCCCcccccceeEEEEeC
Q 037368 28 ITCCSSG--RGKVVIGC-DDGAVSLLDRGLKFNFGFQAH-SSSVLFLQQLKQR-NFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 28 is~~~~~--~~~l~~gs-~dG~i~~~d~~~~~~~~~~~H-~~~V~~i~~~~~~-~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
...++.. .+.|+..+ ..+.|+.++.++....++-.. ......|++++.+ .+.++-+..+. |.+.++
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~---------I~~~~~ 188 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR---------IEVANL 188 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTE---------EEECBT
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCe---------EEEEeC
Confidence 3444432 45665444 567888888655543344322 2456788998754 45566555554 888887
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEE-EeC-CeEEEEEcccccccccceeEEe-cCC
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIG-LDN-GCIYCIKGDIARERITRFKLQV-DNQ 179 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G-~~d-G~V~l~~~~~~~~~~~k~~~~~-~~~ 179 (823)
+... ...+- .... ..+..++++|++.. +... ..+ +.|..++.+ +.....+. ..-
T Consensus 189 dg~~-----------~~~l~-~~~l---~~P~giavdp~~g~---ly~td~~~~~~I~r~~~d-----G~~~~~~~~~~~ 245 (386)
T 3v65_B 189 DGAH-----------RKVLL-WQSL---EKPRAIALHPMEGT---IYWTDWGNTPRIEASSMD-----GSGRRIIADTHL 245 (386)
T ss_dssp TSCS-----------CEEEE-CSSC---SCEEEEEEETTTTE---EEEEECSSSCEEEEEETT-----SCSCEEEECSSC
T ss_pred CCCc-----------eEEee-cCCC---CCCcEEEEEcCCCe---EEEeccCCCCEEEEEeCC-----CCCcEEEEECCC
Confidence 6321 11221 1111 23799999987655 4443 233 566666543 22223333 222
Q ss_pred CCcceEEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCCCccceecccCCCeEE-EeeC-CeEEEEe
Q 037368 180 CSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGRP-EAVYFYE 249 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~~-~~I~i~~ 249 (823)
..-++|+|++++ ..||++.. +.|..+++++.. ...++......+..+++ .++.+. +.+. +.|..++
T Consensus 246 ~~PnGlavd~~~--~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 246 FWPNGLTIDYAG--RRMYWVDAKHHVIERANLDGSH-RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCEEEEEEEGGG--TEEEEEETTTTEEEEECTTSCS-CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCeeeEEEeCCC--CEEEEEECCCCEEEEEeCCCCe-eEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 345799999766 36787754 458889887643 22233322223445555 344444 3343 4677776
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.66 E-value=1.9 Score=43.56 Aligned_cols=118 Identities=11% Similarity=0.145 Sum_probs=66.6
Q ss_pred cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 63 HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 63 H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
-...+..|+++|+++.|.++++... . |-..|+.. ..++.+.... + ...-.|++.+++
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~----~----I~~ld~~g-----------~v~~~i~l~g--~--~D~EGIa~~~~g 81 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPA----A----IVEMTTNG-----------DLIRTIPLDF--V--KDLETIEYIGDN 81 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTE----E----EEEEETTC-----------CEEEEEECSS--C--SSEEEEEECSTT
T ss_pred cccCcceeEEeCCCCEEEEEECCCC----e----EEEEeCCC-----------CEEEEEecCC--C--CChHHeEEeCCC
Confidence 3467999999999888888776531 1 44455541 2566665421 1 126788888887
Q ss_pred CCcceEEEEEeCCeEEEEEcccccccc-cceeEE------ecCCCCcceEEEeecCCeEEEEEEcCC-eEEEEEec
Q 037368 143 PPILLIAIGLDNGCIYCIKGDIARERI-TRFKLQ------VDNQCSVMGLGFRVDGQALQLFAVTPN-SVILFSLQ 210 (823)
Q Consensus 143 ~~~~~ia~G~~dG~V~l~~~~~~~~~~-~k~~~~------~~~~~~It~l~fs~dg~~~~l~~~t~~-~V~~~d~~ 210 (823)
.. +++-=.++.+.+++.+- +.. ...... ...+....+|+|.+.++ .|+++... ...+|...
T Consensus 82 ~~---~vs~E~~~~l~~~~v~~--~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~--~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 82 QF---VISDERDYAIYVISLTP--NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH--TFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EE---EEEETTTTEEEEEEECT--TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT--EEEEEEESSSEEEEEEE
T ss_pred EE---EEEECCCCcEEEEEcCC--CCeeeeeeeeccccccccccCCcceEEEeCCCC--EEEEEECcCCceEEEEc
Confidence 54 44433466777776431 110 000111 11233468999999874 56666643 23444443
No 277
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=95.64 E-value=1.6 Score=44.77 Aligned_cols=21 Identities=5% Similarity=0.295 Sum_probs=14.3
Q ss_pred hHHHHHHHhccHHHHHHHHHh
Q 037368 700 GLLYLYEKLKLYKEVIACYTQ 720 (823)
Q Consensus 700 ~~v~L~~k~g~~~~al~~~~~ 720 (823)
.+..+|.++|.+++|+..+-.
T Consensus 275 ~la~~~~~~g~~~~A~~~~~~ 295 (330)
T 3hym_B 275 AIGYIHSLMGNFENAVDYFHT 295 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHhccHHHHHHHHHH
Confidence 445667777777777777654
No 278
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.64 E-value=1.1 Score=48.81 Aligned_cols=54 Identities=9% Similarity=0.065 Sum_probs=38.3
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
...+++.++|+.|+.+.+.. ...+. -...+...|.-++..|+|++|...|-+.+
T Consensus 33 ~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al 87 (450)
T 2y4t_A 33 GKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVI 87 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45667889999999987752 11111 13455667888889999999999988764
No 279
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.57 E-value=0.57 Score=55.05 Aligned_cols=63 Identities=11% Similarity=0.205 Sum_probs=43.9
Q ss_pred CCCEEEEEecCCe-------------------EEEEc-CCCeeeEeEee--cc-------cceeEEEEecCCC---EEEE
Q 037368 34 GRGKVVIGCDDGA-------------------VSLLD-RGLKFNFGFQA--HS-------SSVLFLQQLKQRN---FLVT 81 (823)
Q Consensus 34 ~~~~l~~gs~dG~-------------------i~~~d-~~~~~~~~~~~--H~-------~~V~~i~~~~~~~---~l~s 81 (823)
..+.+++|+.+|. |.-|| .+|+.+..|+. |. .++....+..+|+ .++.
T Consensus 245 ~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~ 324 (689)
T 1yiq_A 245 ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ 324 (689)
T ss_dssp TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE
Confidence 3578899998874 99999 78998877775 32 1222222223554 7888
Q ss_pred EecCCCCcccccceeEEEEeCCCC
Q 037368 82 VGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 82 ~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
++.+|. +.++|..+.
T Consensus 325 ~~~~G~---------l~~lD~~tG 339 (689)
T 1yiq_A 325 APKNGF---------FYVIDRATG 339 (689)
T ss_dssp CCTTSE---------EEEEETTTC
T ss_pred ECCCCe---------EEEEECCCC
Confidence 888887 999998743
No 280
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.56 E-value=0.31 Score=49.75 Aligned_cols=151 Identities=13% Similarity=0.044 Sum_probs=91.1
Q ss_pred EeeCCCEEEEEe-cCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCC
Q 037368 31 CSSGRGKVVIGC-DDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 31 ~~~~~~~l~~gs-~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
++..++.|+.++ .++.|.++| .+++.+.++..-.+. .+.+.++|+.|+.+..+++ |.+.|..+.
T Consensus 71 i~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~---------l~viD~~t~--- 136 (266)
T 2iwa_A 71 LTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSI---------LYEIDPHTF--- 136 (266)
T ss_dssp EEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSE---------EEEECTTTC---
T ss_pred EEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCe---------EEEEECCCC---
Confidence 444456675554 688999999 778888888632111 1234457777665444444 999998743
Q ss_pred CCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-ecC---------
Q 037368 109 GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-VDN--------- 178 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-~~~--------- 178 (823)
..++++.+...+.|-..++.+.+. ++.. .|.-..++.|.+++.. .+.-...+ ..+
T Consensus 137 -------~v~~~I~Vg~~~~p~~~~nele~~-dg~l---yvn~~~~~~V~vID~~----tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 137 -------KLIKKHNVKYNGHRVIRLNELEYI-NGEV---WANIWQTDCIARISAK----DGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp -------CEEEEEECEETTEECCCEEEEEEE-TTEE---EEEETTSSEEEEEETT----TCCEEEEEECHHHHHHHHHTT
T ss_pred -------cEEEEEEECCCCcccccceeEEEE-CCEE---EEecCCCCeEEEEECC----CCcEEEEEECCCccccccccc
Confidence 356666654322221226778888 6655 5655567889988863 11111112 110
Q ss_pred ---CCCcceEEEeecCCeEEEEEEcC--CeEEEEEecCC
Q 037368 179 ---QCSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQ 212 (823)
Q Consensus 179 ---~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~ 212 (823)
..-..+|+|+++++ .+|++.. ++++..++...
T Consensus 202 ~~~~~v~nGIa~~~~~~--~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENK--RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CTTCCCEEEEEEETTTT--EEEEEETTCSEEEEEEEEEC
T ss_pred ccccCceEEEEEcCCCC--EEEEECCCCCeEEEEEEecc
Confidence 12347999999984 5777764 46888887643
No 281
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.42 E-value=0.013 Score=63.39 Aligned_cols=171 Identities=11% Similarity=0.061 Sum_probs=71.7
Q ss_pred CCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEE-cCCeEEEEEecCCCCcceEEc
Q 037368 142 APPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAV-TPNSVILFSLQNQPPKRQFLD 220 (823)
Q Consensus 142 ~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~~~~~~~~~l~ 220 (823)
+.. +++|+.||.|+.|+.. .+ +..-.... +++.+..+..++ ..++++ .++.|+.||..+.. ....+.
T Consensus 9 ~~~---v~~gs~dg~v~a~d~~----tG-~~~W~~~~-~~~~s~p~~~~g--~~~v~~s~dg~l~a~d~~tG~-~~w~~~ 76 (369)
T 2hz6_A 9 ETL---LFVSTLDGSLHAVSKR----TG-SIKWTLKE-DPVLQVPTHVEE--PAFLPDPNDGSLYTLGSKNNE-GLTKLP 76 (369)
T ss_dssp TTE---EEEEETTSEEEEEETT----TC-CEEEEEEC-CCSCCCC-------CCEEECTTTCCEEEC-----C-CSEECS
T ss_pred CCE---EEEEcCCCEEEEEECC----CC-CEEEEecC-CCceecceEcCC--CEEEEeCCCCEEEEEECCCCc-eeeeee
Confidence 456 8999999999999853 12 22211222 556655555655 234443 45679999985422 222222
Q ss_pred cC-CCccce-ecccCCCeEEEee-CCeEEEEecCCCCccccccCC-eEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 221 NI-GCSTNS-VAMSDRLELIIGR-PEAVYFYEVDGRGPCWAFEGE-KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 221 ~~-~~~~~~-~~~s~~~~liv~~-~~~I~i~~~~g~~~~~~~~g~-~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
.+ +..+.+ .+++.++.++++. ++.|+.|+.+.....+.++.+ ....++.+..+++++. ++.|..||..++.
T Consensus 77 ~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~-----dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 77 FTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRT-----EYTITMYDTKTRE 151 (369)
T ss_dssp CCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------EEEEEE-----EEEEECCCSSSSS
T ss_pred ccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEec-----CCEEEEEECCCCC
Confidence 11 111111 1222456666654 467999998622222333332 1223335566666653 4799999997765
Q ss_pred EEEeccccceeE-EEee----cCcEEEEEcCCeEEEEe
Q 037368 297 IAHSLVVKEVSH-MLCE----WGNIILVMTDKSVLCIG 329 (823)
Q Consensus 297 i~~~~~i~~v~~-v~~~----~~~~~vvs~~~~v~~l~ 329 (823)
+.++........ ++.. .+.+|+.+.++.++.+.
T Consensus 152 ~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 152 LRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp CCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred EEEeEecccccCccccCCccccceEEEECCCCEEEEEE
Confidence 433322111000 1111 14466666666665554
No 282
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.40 E-value=5 Score=46.33 Aligned_cols=219 Identities=10% Similarity=-0.057 Sum_probs=126.7
Q ss_pred CCCEEEEEecCCeEEEEcCCC-eeeEeEe-ecccceeEEEEecCCCEE-EEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 34 GRGKVVIGCDDGAVSLLDRGL-KFNFGFQ-AHSSSVLFLQQLKQRNFL-VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d~~~-~~~~~~~-~H~~~V~~i~~~~~~~~l-~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
+..+|+++ ..+.|+..+-++ +...... +.-..+..|++++.++.| .|-..++. |..++++...
T Consensus 5 p~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~---------I~r~~~~g~~---- 70 (628)
T 4a0p_A 5 PEAFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKT---------ISRAFMNGSA---- 70 (628)
T ss_dssp CCCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTE---------EEEEETTSCS----
T ss_pred CCcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCe---------EEEEECCCCC----
Confidence 44567665 577888888332 2221111 122467899999865555 45445554 8888886421
Q ss_pred CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcceEEEee
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMGLGFRV 189 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~l~fs~ 189 (823)
..++-..+. ..+..+|+++.+.. -..+-...+.|.+.+.+ +...+++. ..-..-.+|++.|
T Consensus 71 -------~~~v~~~g~----~~P~GlAvD~~~~~--LY~tD~~~~~I~v~~~d-----G~~~~~l~~~~l~~P~~iavdp 132 (628)
T 4a0p_A 71 -------LEHVVEFGL----DYPEGMAVDWLGKN--LYWADTGTNRIEVSKLD-----GQHRQVLVWKDLDSPRALALDP 132 (628)
T ss_dssp -------CEEEECSSC----SCCCEEEEETTTTE--EEEEETTTTEEEEEETT-----STTCEEEECSSCCCEEEEEEET
T ss_pred -------cEEEEeCCC----CCcceEEEEeCCCE--EEEEECCCCEEEEEecC-----CCcEEEEEeCCCCCcccEEEcc
Confidence 112211111 12578999976554 04444456778777653 22233333 3323457999987
Q ss_pred cCCeEEEEEEc---CCeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcccccc--C
Q 037368 190 DGQALQLFAVT---PNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAFE--G 261 (823)
Q Consensus 190 dg~~~~l~~~t---~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~~--g 261 (823)
.. ..||++. ..+|...++++.. ..++-.....++.+++++ ++++.++- .+.|..++.+|........ .
T Consensus 133 ~~--G~lY~tD~g~~~~I~r~~~dG~~--~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~ 208 (628)
T 4a0p_A 133 AE--GFMYWTEWGGKPKIDRAAMDGSE--RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLP 208 (628)
T ss_dssp TT--TEEEEEECSSSCEEEEEETTSCS--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCS
T ss_pred CC--CeEEEeCCCCCCEEEEEeCCCCc--eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCC
Confidence 54 2688886 3468888887653 233322344567788987 46666653 4689999988764422111 2
Q ss_pred CeEEEEeeCcEEEEEEecCCCCccEEEEEeC
Q 037368 262 EKKLLGWFRGYLLCVIADQRNSKNIFNVYDL 292 (823)
Q Consensus 262 ~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~ 292 (823)
++..++.+++++..... ..+.|...|.
T Consensus 209 ~P~glav~~~~ly~tD~----~~~~I~~~dk 235 (628)
T 4a0p_A 209 HPFGLTQYQDYIYWTDW----SRRSIERANK 235 (628)
T ss_dssp CEEEEEEETTEEEEEET----TTTEEEEEET
T ss_pred CceEEEEECCEEEEecC----CCCEEEEEEC
Confidence 46778888877665542 2356666664
No 283
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=95.39 E-value=4.1 Score=44.73 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=52.2
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH------HHHhhchhhH
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV------IQKFLDAQRI 409 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v------I~kFl~~~~~ 409 (823)
=..+++.++|+.|++.-+.. ...++ ...+...|.-++..|+|++|...|-+.+. .+|..+ ..-+...++.
T Consensus 13 g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l~~~~~~~g~~ 89 (514)
T 2gw1_A 13 GNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALE-LKPDYSKVLLRRASANEGLGKF 89 (514)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCSCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhc-cChHHHHHHHHHHHHHHHHhhH
Confidence 45677889999999987752 11122 35666778889999999999999987753 233221 1223344555
Q ss_pred HHHHHHHHHHHHcC
Q 037368 410 YNLTNYLEKLHEKG 423 (823)
Q Consensus 410 ~~L~~YL~~l~~~~ 423 (823)
+.=..++.......
T Consensus 90 ~~A~~~~~~~~~~~ 103 (514)
T 2gw1_A 90 ADAMFDLSVLSLNG 103 (514)
T ss_dssp HHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhcC
Confidence 54444555544433
No 284
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.31 E-value=0.72 Score=49.87 Aligned_cols=161 Identities=12% Similarity=0.105 Sum_probs=93.8
Q ss_pred EEeeCCCEEEEEecCCeEEEEc-CCCeeeEeEeec---c-cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 30 CCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGFQAH---S-SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 30 ~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~H---~-~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
+++..+..++++. ++.||.-+ ......+.++.- . ..|.++..+|+|++||-.|+.+ |.|-.+-.
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~----------V~Vv~LP~ 95 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE----------IFVMEVPW 95 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE----------EEEEECCT
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe----------EEEEEecC
Confidence 4444455666653 46677666 322223344432 2 3688999999999999998875 88877762
Q ss_pred CCCCCCCCC--CCceEEEEEeccCC-CCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE------
Q 037368 105 MEPEGTSST--SPDCIGILRVFTSQ-FPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ------ 175 (823)
Q Consensus 105 ~~~~~~~~~--~~~~~~~~~~~~~~-~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~------ 175 (823)
........+ .+...+++++...+ .|...|..+-|||-+..-.++++=+.|+.|++|+.....+ ++..+
T Consensus 96 ~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~---~P~~L~k~~~~ 172 (452)
T 3pbp_A 96 GYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE---KPIVLNKPNNS 172 (452)
T ss_dssp TCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS---CCEEESCCCSE
T ss_pred ccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC---CCcchhccccc
Confidence 110000000 12224555543211 1224499999999775333499999999999998752111 11111
Q ss_pred ec---CCCCcceEEEeecCCeEEEEEEc--CCe-EEE
Q 037368 176 VD---NQCSVMGLGFRVDGQALQLFAVT--PNS-VIL 206 (823)
Q Consensus 176 ~~---~~~~It~l~fs~dg~~~~l~~~t--~~~-V~~ 206 (823)
+. ....|.+++|..+| -.|++.+ .++ |+.
T Consensus 173 fg~d~~~~ev~S~~Fg~~~--lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 173 FGLDARVNDITDLEFSKDG--LTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EESCSSCCCEEEEEECTTS--SCEEEEECTTSCEEEE
T ss_pred cCCCcccceEEEEEEcCCC--cEEEEEecCCCCCEEE
Confidence 11 12578899999876 5677754 444 553
No 285
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.30 E-value=2 Score=50.09 Aligned_cols=29 Identities=31% Similarity=0.278 Sum_probs=24.8
Q ss_pred CCCEEEEEecCCeEEEEc-CCCeeeEeEee
Q 037368 34 GRGKVVIGCDDGAVSLLD-RGLKFNFGFQA 62 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d-~~~~~~~~~~~ 62 (823)
.++.+++++.+|.|.-+| .+|+.+.+++.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 467899999999999999 78998877765
No 286
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=95.26 E-value=1.3 Score=46.49 Aligned_cols=34 Identities=6% Similarity=-0.012 Sum_probs=23.6
Q ss_pred cCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHhccc
Q 037368 577 HHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSY 613 (823)
Q Consensus 577 ~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llelyl~~ 613 (823)
++.+..+.+++.++...+. ....+..+-.+|...
T Consensus 265 g~~~~A~~~~~~al~~~~~---~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 265 NQSEEAVAAYRRALELQPG---YIRSRYNLGISCINL 298 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCC---cHHHHHHHHHHHHHC
Confidence 4567778888888877653 346677777777664
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.22 E-value=2.7 Score=46.06 Aligned_cols=151 Identities=14% Similarity=0.156 Sum_probs=84.0
Q ss_pred ceeEEEEec-CCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCC
Q 037368 66 SVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPP 144 (823)
Q Consensus 66 ~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~ 144 (823)
....|+++| ++..|..+...+. |+.+|+... .+.++.. . ...+..++++++++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~---------I~~id~~~~-----------~v~~~~~-~----~~~P~~ia~d~~G~~ 192 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHP---------TRLIDFEKE-----------YVSTVYS-G----LSKVRTICWTHEADS 192 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEE---------EEEEETTTT-----------EEEEEEC-C----CSCEEEEEECTTSSE
T ss_pred CCCEEEECCCCCCeEEEEeCCCc---------EEEEECCCC-----------EEEEEec-C----CCCcceEEEeCCCCE
Confidence 357888987 3444554444344 888998742 1222221 1 123799999999984
Q ss_pred cceEEEEEeCC----eEEEEEcccccccccc-eeEEecCCCCcceEEEee-cCCeEEEEEEc--CCeEEEEEecCCCCcc
Q 037368 145 ILLIAIGLDNG----CIYCIKGDIARERITR-FKLQVDNQCSVMGLGFRV-DGQALQLFAVT--PNSVILFSLQNQPPKR 216 (823)
Q Consensus 145 ~~~ia~G~~dG----~V~l~~~~~~~~~~~k-~~~~~~~~~~It~l~fs~-dg~~~~l~~~t--~~~V~~~d~~~~~~~~ 216 (823)
.+++...+| .|..+..+ .... ...+.. -....++++++ +| .|+++. .++|+.|+..+.. ..
T Consensus 193 --lyvad~~~~~~~~~v~~~~~~----g~~~~~~~l~~-~~~p~giavdp~~g---~lyv~d~~~~~V~~~~~~~~~-~~ 261 (430)
T 3tc9_A 193 --MIITNDQNNNDRPNNYILTRE----SGFKVITELTK-GQNCNGAETHPING---ELYFNSWNAGQVFRYDFTTQE-TT 261 (430)
T ss_dssp --EEEEECCSCTTSEEEEEEEGG----GTSCSEEEEEE-CSSCCCEEECTTTC---CEEEEETTTTEEEEEETTTTE-EE
T ss_pred --EEEEeCCCCcccceEEEEeCC----Cceeeeeeecc-CCCceEEEEeCCCC---EEEEEECCCCEEEEEECCCCc-EE
Confidence 044444333 23333321 1111 122222 23467899998 55 366664 4569999987532 11
Q ss_pred eEEc-cCCCccceecccCCCe-EEEe--eCCeEEEEecCC
Q 037368 217 QFLD-NIGCSTNSVAMSDRLE-LIIG--RPEAVYFYEVDG 252 (823)
Q Consensus 217 ~~l~-~~~~~~~~~~~s~~~~-liv~--~~~~I~i~~~~g 252 (823)
.... ..+..++.++++|+|. +.++ ..+.|+.++.++
T Consensus 262 ~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 262 PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 2221 2224467789999997 5555 346888887765
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.20 E-value=3.5 Score=48.76 Aligned_cols=187 Identities=9% Similarity=0.084 Sum_probs=94.5
Q ss_pred CEEEEEec-CC----eEEEEc-CCC-eee-EeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCC
Q 037368 36 GKVVIGCD-DG----AVSLLD-RGL-KFN-FGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEP 107 (823)
Q Consensus 36 ~~l~~gs~-dG----~i~~~d-~~~-~~~-~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~ 107 (823)
++|+.+.. +| +|+++| .++ +.+ ..+. .....+.|+|+|+.|+-++.|.++.+.. |.+|++.+..
T Consensus 187 ~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~----v~~~~lgt~~- 258 (751)
T 2xe4_A 187 DLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENK----VWRHVMGKLQ- 258 (751)
T ss_dssp CEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEE----EEEEETTSCG-
T ss_pred CEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCE----EEEEECCCCc-
Confidence 46765543 33 499999 555 422 1122 2245788999998888777775322222 7788886421
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC---eEEEEEcccccccccce--eEEecC-CCC
Q 037368 108 EGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG---CIYCIKGDIARERITRF--KLQVDN-QCS 181 (823)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG---~V~l~~~~~~~~~~~k~--~~~~~~-~~~ 181 (823)
..-...+...+ + .....++++||++. |++...++ .|.+++.+ . ..... +.+... .++
T Consensus 259 -------~~~~lv~~~~~---~-~~~~~~~~SpDg~~---l~~~~~~~~~~~l~~~d~~--~-~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 259 -------SEDVCLYEEHN---P-LFSAFMYKAADTNT---LCIGSQSPETAEVHLLDLR--K-GNAHNTLEIVRPREKGV 321 (751)
T ss_dssp -------GGCEEEEECCC---T-TCEEEEEECTTSSE---EEEEEECSSCEEEEEEESS--S-CTTCCCEEESSCCCTTC
T ss_pred -------hhcEEEEecCC---C-ceEEEEEECCCCCE---EEEEecCCCCceEEEEECC--C-CCCCceeEEeecCCCCc
Confidence 01111111111 1 12567899999998 87766432 44555432 1 11123 333332 345
Q ss_pred cceEEEeecCCeEEEEEEcCC-----eEEEEEecCCCCcce-EEccC-CCccceecccCCCeEEE-ee-CC--eEEEEec
Q 037368 182 VMGLGFRVDGQALQLFAVTPN-----SVILFSLQNQPPKRQ-FLDNI-GCSTNSVAMSDRLELII-GR-PE--AVYFYEV 250 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t~~-----~V~~~d~~~~~~~~~-~l~~~-~~~~~~~~~s~~~~liv-~~-~~--~I~i~~~ 250 (823)
..++.|.. |. .+++.++.+ +|+.+++.+...... ++... ...+..+.+. ++.+++ .. ++ .|++++.
T Consensus 322 ~~s~~~~~-g~-~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 322 RYDVQMHG-TS-HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CEEEEEET-TT-EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eEEEeeee-CC-EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 55655544 43 455665543 477777653122233 34321 1233344443 344444 33 33 4566664
No 289
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.20 E-value=0.88 Score=51.60 Aligned_cols=193 Identities=13% Similarity=0.096 Sum_probs=111.5
Q ss_pred CEEEEEe-cCCeEEEEc-CCCeeeEeEee-cccceeEEEE-e-cCCCEEEEEecCCCCccc----c-----cceeEEEEe
Q 037368 36 GKVVIGC-DDGAVSLLD-RGLKFNFGFQA-HSSSVLFLQQ-L-KQRNFLVTVGEDEQVSAQ----Q-----SAVCLKVFD 101 (823)
Q Consensus 36 ~~l~~gs-~dG~i~~~d-~~~~~~~~~~~-H~~~V~~i~~-~-~~~~~l~s~s~D~~~~~~----~-----~~~~vkvWd 101 (823)
++++++. .++.|-+.| .++++.+...- -......+++ . |+++++..+++...+.++ + ..-.+.+.|
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID 181 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVD 181 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEE
Confidence 4665554 566799999 77887765542 2345778887 4 899999888643210000 0 111278888
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCC---------------eEEEEE-----
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNG---------------CIYCIK----- 161 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG---------------~V~l~~----- 161 (823)
.++. ....++.+.. . ..-++++|||+. +.+.+.+. .|.+++
T Consensus 182 ~~t~----------~v~~qI~Vgg--~----pd~~~~spdGk~---~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 182 ADKW----------EVAWQVLVSG--N----LDNCDADYEGKW---AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp TTTT----------EEEEEEEESS--C----CCCEEECSSSSE---EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred CCCC----------eEEEEEEeCC--C----ccceEECCCCCE---EEEEecCcccCcchhhccccccceEEEeecccee
Confidence 8743 2455555432 2 355778888887 66666443 233333
Q ss_pred ------------------cccccccccc-eeEEecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCC-------
Q 037368 162 ------------------GDIARERITR-FKLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQP------- 213 (823)
Q Consensus 162 ------------------~~~~~~~~~k-~~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~------- 213 (823)
+. ...+.. ...+-. .....++.|+|||+ .++++. .+.|.++|+....
T Consensus 243 ~~v~~Gk~~~i~~V~VID~~--~~~~~~~~~~Ipv-g~~PhGv~~sPDGk--~v~V~~~~s~~VsVid~~~~~~~~~~~l 317 (595)
T 1fwx_A 243 KAIAAGDYQELNGVKVVDGR--KEASSLFTRYIPI-ANNPHGCNMAPDKK--HLCVAGKLSPTVTVLDVTRFDAVFYENA 317 (595)
T ss_dssp HHHHHTCSEEETTEEEEECS--GGGCCSSEEEEEE-ESSCCCEEECTTSS--EEEEECTTSSBEEEEEGGGHHHHHHSCC
T ss_pred EeccCCCeeEECcEEEEeCc--ccCCceeEEEEec-CCCceEEEEcCCCC--EEEEeCCCCCeEEEEECccccccccccc
Confidence 21 000111 112211 22456899999995 577775 3579999987421
Q ss_pred Ccc-eEE--ccCCCccceecccCCCeEEEe--eCCeEEEEecCC
Q 037368 214 PKR-QFL--DNIGCSTNSVAMSDRLELIIG--RPEAVYFYEVDG 252 (823)
Q Consensus 214 ~~~-~~l--~~~~~~~~~~~~s~~~~liv~--~~~~I~i~~~~g 252 (823)
.+. .+. ..-|..+.-++|+|+|...++ -++.|..|+++.
T Consensus 318 ~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 318 DPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 000 111 134556677899999954444 357899999763
No 290
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.13 E-value=1 Score=45.58 Aligned_cols=171 Identities=10% Similarity=0.055 Sum_probs=94.1
Q ss_pred EEEeeCCCEEEEEe-cCC--eEEEEc-CCCeeeEeEeecccce--eEEEEecCCCEEEEEe-cCCCCcccccceeEEEEe
Q 037368 29 TCCSSGRGKVVIGC-DDG--AVSLLD-RGLKFNFGFQAHSSSV--LFLQQLKQRNFLVTVG-EDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 29 s~~~~~~~~l~~gs-~dG--~i~~~d-~~~~~~~~~~~H~~~V--~~i~~~~~~~~l~s~s-~D~~~~~~~~~~~vkvWd 101 (823)
-.+.+.++.|+.++ .+| .|+.+| .+++.+++..-.. .. -.|.+ .++.|..+. .++. +.++|
T Consensus 46 qGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~--~g~~ly~ltw~~~~---------v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISD--WKDKIVGLTWKNGL---------GFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEE--ETTEEEEEESSSSE---------EEEEE
T ss_pred ceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEE--eCCEEEEEEeeCCE---------EEEEE
Confidence 34445566775544 445 899999 7898887775432 33 33444 355555444 4554 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE--ecCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--VDNQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~~~~ 179 (823)
..+. ..++++.... .-+ ++++|+.. +.+...+++|.++|..- ......+ ....
T Consensus 114 ~~t~----------~~~~ti~~~~------eG~--glt~dg~~---L~~SdGs~~i~~iDp~T----~~v~~~I~V~~~g 168 (262)
T 3nol_A 114 IRNL----------RQVRSFNYDG------EGW--GLTHNDQY---LIMSDGTPVLRFLDPES----LTPVRTITVTAHG 168 (262)
T ss_dssp TTTC----------CEEEEEECSS------CCC--CEEECSSC---EEECCSSSEEEEECTTT----CSEEEEEECEETT
T ss_pred CccC----------cEEEEEECCC------Cce--EEecCCCE---EEEECCCCeEEEEcCCC----CeEEEEEEeccCC
Confidence 9853 3566766321 123 34456777 77665567788887531 1111111 1223
Q ss_pred CCcc---eEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEccC------------CCccceecccCCC-eEEEee
Q 037368 180 CSVM---GLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDNI------------GCSTNSVAMSDRL-ELIIGR 241 (823)
Q Consensus 180 ~~It---~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~~------------~~~~~~~~~s~~~-~liv~~ 241 (823)
.|+. .+.|. +| .|++.. .+.|.+.|..+.. ....++-. +.-++.++++|++ +|.+++
T Consensus 169 ~~~~~lNELe~~-~G---~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 169 EELPELNELEWV-DG---EIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EECCCEEEEEEE-TT---EEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccccccceeEEE-CC---EEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 3444 47775 55 366554 4568888876432 33333211 2245678888754 444443
No 291
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.01 E-value=7.6 Score=48.19 Aligned_cols=194 Identities=14% Similarity=0.131 Sum_probs=106.1
Q ss_pred CCCeEEEeeCCCEEEEEecCCeEEEEc-CCCeeeEeE-eecccceeEEEEecC------CCEEEEEec-CCCCcccccce
Q 037368 25 SGNITCCSSGRGKVVIGCDDGAVSLLD-RGLKFNFGF-QAHSSSVLFLQQLKQ------RNFLVTVGE-DEQVSAQQSAV 95 (823)
Q Consensus 25 ~~~is~~~~~~~~l~~gs~dG~i~~~d-~~~~~~~~~-~~H~~~V~~i~~~~~------~~~l~s~s~-D~~~~~~~~~~ 95 (823)
+..|+++++.+..+++++ +|.+.++. .++++...- ..-...|.|+++.|. ++++|.+.. |++
T Consensus 513 ~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~t-------- 583 (1158)
T 3ei3_A 513 AKNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDIS-------- 583 (1158)
T ss_dssp CCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTE--------
T ss_pred CCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCE--------
Confidence 345877778778888885 67888876 334432111 123578999999763 367887775 887
Q ss_pred eEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEec--CCCCcceEEEEEeCCeEEEEEccccccccccee
Q 037368 96 CLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLE--EAPPILLIAIGLDNGCIYCIKGDIARERITRFK 173 (823)
Q Consensus 96 ~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~--d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~ 173 (823)
|+|.++...+ .+....+.. ..+ +.++.+.. ...+ +.+|..||.+..+..+.....-.-.+
T Consensus 584 -v~I~sL~~l~----------~~~~~~L~~-~~~---p~si~l~~~~~~~~---L~igl~dG~l~~~~~d~~tg~l~d~r 645 (1158)
T 3ei3_A 584 -ARILKLPSFE----------LLHKEMLGG-EII---PRSILMTTFESSHY---LLCALGDGALFYFGLNIETGLLSDRK 645 (1158)
T ss_dssp -EEEEETTTCC----------EEEEEECCS-SCC---EEEEEEEEETTEEE---EEEEETTSEEEEEEECTTTCCEEEEE
T ss_pred -EEEEECCCCC----------eEEEEECCC-CCC---CcEEEEEEeCCCcE---EEEEeCCCeEEEEEEcCCCCccccce
Confidence 9999997432 232222211 112 44544432 2235 88999999998776442110000111
Q ss_pred EEecCCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccC-CCccc-eeccc----CCCeEEEeeCCeEEE
Q 037368 174 LQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNI-GCSTN-SVAMS----DRLELIIGRPEAVYF 247 (823)
Q Consensus 174 ~~~~~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~-~~~~~-~~~~s----~~~~liv~~~~~I~i 247 (823)
...-+..||.=..|...|. ..++++++.-..+|.-.++ . .+.+- ...+. .+.|+ |+| ++.+.++++++
T Consensus 646 ~~~LG~~pv~L~~~~~~~~-~~V~a~s~rp~liy~~~~~--l--~~s~l~~~~v~~~~~F~se~~~~g-~v~~~~~~LrI 719 (1158)
T 3ei3_A 646 KVTLGTQPTVLRTFRSLST-TNVFACSDRPTVIYSSNHK--L--VFSNVNLKEVNYMCPLNSDGYPDS-LALANNSTLTI 719 (1158)
T ss_dssp EEECCSSCCEEEEEESSSC-EEEEEESSSCEEEEESSSS--E--EEEEBSSSCCCEEEEECCSSSTTE-EEEECSSCEEE
T ss_pred eEEcCCCceEEEEEeeCCc-eeEEEECCCCEEEEEcCCc--e--EEeccChHHhceEeccCcccCCCc-EEEEcCCceEE
Confidence 1222355776666665554 4677777665555543322 1 11111 11222 23443 333 44455567888
Q ss_pred EecC
Q 037368 248 YEVD 251 (823)
Q Consensus 248 ~~~~ 251 (823)
..++
T Consensus 720 ~~i~ 723 (1158)
T 3ei3_A 720 GTID 723 (1158)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8775
No 292
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=94.91 E-value=1.3 Score=45.44 Aligned_cols=57 Identities=14% Similarity=-0.027 Sum_probs=41.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..-..++..++|+.|+.+.+.. ...+. ....+...|..++..|+|++|...|.+.+
T Consensus 25 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 82 (327)
T 3cv0_A 25 MEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHAR 82 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667788999999999988762 11111 23455567888899999999999988764
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.91 E-value=1.9 Score=45.17 Aligned_cols=158 Identities=10% Similarity=0.060 Sum_probs=90.9
Q ss_pred CCCEEEEEe-cCCeEEEEcCC-CeeeE-eEee----cc--cceeEEEE---ecCCCEEEEEecCC-----CCccccccee
Q 037368 34 GRGKVVIGC-DDGAVSLLDRG-LKFNF-GFQA----HS--SSVLFLQQ---LKQRNFLVTVGEDE-----QVSAQQSAVC 96 (823)
Q Consensus 34 ~~~~l~~gs-~dG~i~~~d~~-~~~~~-~~~~----H~--~~V~~i~~---~~~~~~l~s~s~D~-----~~~~~~~~~~ 96 (823)
.++.+++++ ..|+|..|+.. +.... .+.+ .. ..+..|.+ +|++.++++ .+-+ .+.+......
T Consensus 23 ~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv-~~~~~af~~~g~~~~g~~~ 101 (334)
T 2p9w_A 23 TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAV-MKNAKSFNFADQSSHGASS 101 (334)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEE-EEETTTTCTTSCCSSSCCE
T ss_pred CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEE-EcccccccccccccCCCCE
Confidence 458888888 78999999965 43322 2322 11 24689999 688766664 3310 0000000112
Q ss_pred EEEEeCCCCCCCCCCCCCCceEEEEEecc--CC-------CCCCceEEEEEecCCCCcceEEEEEeC-CeEEEEEccccc
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIGILRVFT--SQ-------FPEAKITSFLVLEEAPPILLIAIGLDN-GCIYCIKGDIAR 166 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~~~~~~~--~~-------~p~~~v~~va~~~d~~~~~~ia~G~~d-G~V~l~~~~~~~ 166 (823)
|..+|+...+ ++. .+..+.+.. .. .+ ..+..++++++|+. .++++.. +.|..++.+
T Consensus 102 v~~~Dl~~~~-----tg~--~~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~Gna---YVt~s~~~~~I~rV~pd--- 167 (334)
T 2p9w_A 102 FHSFNLPLSE-----NSK--PVWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNS---YVAFALGMPAIARVSAD--- 167 (334)
T ss_dssp EEEEESSCCT-----TCC--CSEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCE---EEEEEESSCEEEEECTT---
T ss_pred EEEEcCCcCC-----CCC--EEEEecCccccccccccccccc-cCCceeEECCCCCE---EEeCCCCCCeEEEEeCC---
Confidence 8888987110 111 122222210 00 00 12789999999999 9999988 888877653
Q ss_pred ccccceeEEecCC------CCcceEEEeecCCeEEEEEE-cCCeEEEEEec
Q 037368 167 ERITRFKLQVDNQ------CSVMGLGFRVDGQALQLFAV-TPNSVILFSLQ 210 (823)
Q Consensus 167 ~~~~k~~~~~~~~------~~It~l~fs~dg~~~~l~~~-t~~~V~~~d~~ 210 (823)
+.+...+.... --.++|++.|+|+ .|++. +.+.+..+|+.
T Consensus 168 --G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~--~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 168 --GKTVSTFAWESGNGGQRPGYSGITFDPHSN--KLIAFGGPRALTAFDVS 214 (334)
T ss_dssp --SCCEEEEEECCCCSSSCCSCSEEEEETTTT--EEEEESSSSSEEEEECS
T ss_pred --CCEEeeeeecCCCcccccCcceEEEeCCCC--EEEEEcCCCeEEEEcCC
Confidence 22233332111 1266999999994 55555 44569999987
No 294
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.83 E-value=3.5 Score=42.89 Aligned_cols=187 Identities=11% Similarity=-0.058 Sum_probs=100.9
Q ss_pred eEEEeeC--CCEEEEEe-cCCeEEEEcCCC----eeeEeEe-ecccceeEEEEecC-CCEEEEEecCCCCcccccceeEE
Q 037368 28 ITCCSSG--RGKVVIGC-DDGAVSLLDRGL----KFNFGFQ-AHSSSVLFLQQLKQ-RNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 28 is~~~~~--~~~l~~gs-~dG~i~~~d~~~----~~~~~~~-~H~~~V~~i~~~~~-~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
...++.+ ++.|+.++ ..+.|..++.++ .....+- ..-.....|++++. +++.++-+..++ |.
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~---------I~ 102 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT---------VS 102 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE---------EE
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCE---------EE
Confidence 4445543 45675554 568899998554 2222222 22245688999864 455566566665 88
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceE-EEEEeC-CeEEEEEcccccccccceeEEe
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLI-AIGLDN-GCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~i-a~G~~d-G~V~l~~~~~~~~~~~k~~~~~ 176 (823)
+.+++.. ...++-.... ..+..++++|++.. + .+...+ +.|..++.+ +...+++.
T Consensus 103 ~~~~~g~-----------~~~~~~~~~~----~~P~~iavdp~~g~---ly~~d~~~~~~I~~~~~d-----G~~~~~~~ 159 (316)
T 1ijq_A 103 VADTKGV-----------KRKTLFRENG----SKPRAIVVDPVHGF---MYWTDWGTPAKIKKGGLN-----GVDIYSLV 159 (316)
T ss_dssp EEETTSS-----------SEEEEEECTT----CCEEEEEEETTTTE---EEEEECSSSCEEEEEETT-----SCCEEEEE
T ss_pred EEeCCCC-----------ceEEEEECCC----CCcceEEeCCCCCE---EEEEccCCCCeEEEEcCC-----CCCeEEEE
Confidence 8888732 1222211111 23799999996554 4 333333 677766543 22223333
Q ss_pred c-CCCCcceEEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccC--CCccceecccCCCeEEE-eeC-CeEEEEe
Q 037368 177 D-NQCSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNI--GCSTNSVAMSDRLELII-GRP-EAVYFYE 249 (823)
Q Consensus 177 ~-~~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~--~~~~~~~~~s~~~~liv-~~~-~~I~i~~ 249 (823)
. .-..-.+|+|++++. .||++.. +.|..+++++.. ........ ...+..+++. ++.+.+ -+. +.|..++
T Consensus 160 ~~~~~~P~gla~d~~~~--~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp CSSCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ECCCCCceEEEEeccCC--EEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEe
Confidence 2 223456999998763 6777754 469999987642 22222211 1223445554 355444 333 4777777
Q ss_pred c
Q 037368 250 V 250 (823)
Q Consensus 250 ~ 250 (823)
.
T Consensus 236 ~ 236 (316)
T 1ijq_A 236 R 236 (316)
T ss_dssp T
T ss_pred C
Confidence 5
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.72 E-value=1.6 Score=46.46 Aligned_cols=185 Identities=11% Similarity=0.166 Sum_probs=99.3
Q ss_pred CCCeEEEeeCCCEEEEEe-------------cCCeEEEEcCC---Ceee-EeEee-----cccceeEEEEec--CCC-EE
Q 037368 25 SGNITCCSSGRGKVVIGC-------------DDGAVSLLDRG---LKFN-FGFQA-----HSSSVLFLQQLK--QRN-FL 79 (823)
Q Consensus 25 ~~~is~~~~~~~~l~~gs-------------~dG~i~~~d~~---~~~~-~~~~~-----H~~~V~~i~~~~--~~~-~l 79 (823)
...|.. .+++.+++++ .+|.|.++|.+ ++.. -.+.+ .......|.+.+ +|. +|
T Consensus 52 ~EDi~~--~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEI--LPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEE--CTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEE--cCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 344542 4567888776 79999999943 3321 12222 234667777766 454 34
Q ss_pred EEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-------
Q 037368 80 VTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL------- 152 (823)
Q Consensus 80 ~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~------- 152 (823)
..+..... .+. |-+|+++... +.-..+.++. . .+-..++.++++++|+. .+++.
T Consensus 130 ~Vvnh~~~--~s~----ielf~~d~~~------~~~~~~~~~~--g--~~~~~pND~~v~~~G~f---yvt~~~~ftd~~ 190 (355)
T 3sre_A 130 LVVNHPGS--SST----VEVFKFQEEE------KSLLHLKTIR--H--KLLPSVNDIVAVGPEHF---YATNDHYFIDPY 190 (355)
T ss_dssp EEEECSTT--CCE----EEEEEEETTT------TEEEEEEEEC--C--TTCSSEEEEEEEETTEE---EEEESCSCSSHH
T ss_pred EEEECCCC--CCe----EEEEEEECCC------CEEEEEeccc--c--CCCCCCceEEEeCCCCE---EecCCcEeCCcc
Confidence 44422210 011 8888887421 1111222222 1 12234799999999876 66543
Q ss_pred ----------eCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCC--cceE
Q 037368 153 ----------DNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPP--KRQF 218 (823)
Q Consensus 153 ----------~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~--~~~~ 218 (823)
..|.|..++. + +.+++.+.-.--++|+|+||++ .|+++. ..+|+.|++...+. ..++
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~------~-~~~~~~~~l~~pNGia~spDg~--~lYvadt~~~~I~~~~~~~~g~l~~~~~ 261 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSP------N-DVRVVAEGFDFANGINISPDGK--YVYIAELLAHKIHVYEKHANWTLTPLRV 261 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECT------T-CCEEEEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred cccchhhccCCccEEEEEEC------C-eEEEeecCCcccCcceECCCCC--EEEEEeCCCCeEEEEEECCCCcEecCEE
Confidence 1244444432 1 2333333323457899999994 577664 45799999874332 2233
Q ss_pred EccCCCccceecccC-CCeEEEe
Q 037368 219 LDNIGCSTNSVAMSD-RLELIIG 240 (823)
Q Consensus 219 l~~~~~~~~~~~~s~-~~~liv~ 240 (823)
+. .+..+.-+++++ +|.+.++
T Consensus 262 ~~-~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 262 LS-FDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp EE-CSSEEEEEEECTTTCCEEEE
T ss_pred Ee-CCCCCceEEEeCCCCcEEEE
Confidence 42 234445567777 4776653
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.71 E-value=3.3 Score=43.22 Aligned_cols=181 Identities=9% Similarity=-0.063 Sum_probs=99.3
Q ss_pred CCEEEEE-ecCCeEEEEcCCCee--eEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCC
Q 037368 35 RGKVVIG-CDDGAVSLLDRGLKF--NFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGT 110 (823)
Q Consensus 35 ~~~l~~g-s~dG~i~~~d~~~~~--~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~ 110 (823)
.+.|+.. ...+.|+.++.++.. ...+..--.....+++++ .+++.+|-+..+. |.+.+++...
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~---------I~~~~~dG~~---- 112 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR---------IEVSNLDGSL---- 112 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTE---------EEEEETTSCS----
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCE---------EEEEECCCCc----
Confidence 3566544 456778888854432 111222224677899987 4555566555555 8899987421
Q ss_pred CCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe--CCeEEEEEcccccccccceeEEec-CCCCcceEEE
Q 037368 111 SSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD--NGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGF 187 (823)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~f 187 (823)
...+..... ..+..++++|.+.. +..... ++.|..++.+ +...+++.. .-..-.+|+|
T Consensus 113 -------~~~l~~~~~----~~P~giavdp~~g~---ly~td~~~~~~I~r~~~d-----G~~~~~~~~~~l~~Pnglav 173 (318)
T 3sov_A 113 -------RKVLFWQEL----DQPRAIALDPSSGF---MYWTDWGEVPKIERAGMD-----GSSRFIIINSEIYWPNGLTL 173 (318)
T ss_dssp -------CEEEECSSC----SSEEEEEEEGGGTE---EEEEECSSSCEEEEEETT-----SCSCEEEECSSCSCEEEEEE
T ss_pred -------EEEEEeCCC----CCccEEEEeCCCCE---EEEEecCCCCEEEEEEcC-----CCCeEEEEECCCCCccEEEE
Confidence 112211111 23799999997655 555432 4666666543 222223332 2233468999
Q ss_pred eecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEeeC-CeEEEEec
Q 037368 188 RVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRP-EAVYFYEV 250 (823)
Q Consensus 188 s~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~~-~~I~i~~~ 250 (823)
++++ ..||++.. +.|..+++++.. ...+.......+..+++..++-+++-+. +.|..++.
T Consensus 174 d~~~--~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 174 DYEE--QKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp ETTT--TEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred eccC--CEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 9876 36888753 469999987643 2223332223344555544433444443 57777776
No 297
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.68 E-value=0.64 Score=47.09 Aligned_cols=169 Identities=9% Similarity=-0.042 Sum_probs=94.2
Q ss_pred EEEeeCCCEEE-EEecCCeEEEEc-CCCeeeEeEeecccce--eEEEEecCCCEEEEE-ecCCCCcccccceeEEEEeCC
Q 037368 29 TCCSSGRGKVV-IGCDDGAVSLLD-RGLKFNFGFQAHSSSV--LFLQQLKQRNFLVTV-GEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 29 s~~~~~~~~l~-~gs~dG~i~~~d-~~~~~~~~~~~H~~~V--~~i~~~~~~~~l~s~-s~D~~~~~~~~~~~vkvWdl~ 103 (823)
-.+.+.++.|+ +++.+|.|+.+| .+++.+++. -.... ..+.+ .++.|..+ -.++. +.++|..
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~--~g~~Ly~ltw~~~~---------v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLAS--DGERLYQLTWTEGL---------LFTWSGM 124 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEE--CSSCEEEEESSSCE---------EEEEETT
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEE--eCCEEEEEEccCCE---------EEEEECC
Confidence 34455566664 455778999999 788887776 22233 33554 44444444 34554 9999998
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE--ecCCC-
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--VDNQC- 180 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~~~~~- 180 (823)
+. ..++++... + .-+.++ +|+.. +.+...++.|.++|..- ......+ .....
T Consensus 125 Tl----------~~~~ti~~~----~--eGwGLt--~Dg~~---L~vSdGs~~l~~iDp~T----~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 125 PP----------QRERTTRYS----G--EGWGLC--YWNGK---LVRSDGGTMLTFHEPDG----FALVGAVQVKLRGQP 179 (268)
T ss_dssp TT----------EEEEEEECS----S--CCCCEE--EETTE---EEEECSSSEEEEECTTT----CCEEEEEECEETTEE
T ss_pred cC----------cEEEEEeCC----C--ceeEEe--cCCCE---EEEECCCCEEEEEcCCC----CeEEEEEEeCCCCcc
Confidence 43 356666632 1 124444 55666 66666688888887531 1111111 12222
Q ss_pred --CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEcc-------------CCCccceecccCCC-eEEEe
Q 037368 181 --SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLDN-------------IGCSTNSVAMSDRL-ELIIG 240 (823)
Q Consensus 181 --~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~~-------------~~~~~~~~~~s~~~-~liv~ 240 (823)
.++.|.|. +| .|++.. .+.|.+.|..+.. ....++- .+.-++.++++|++ +|.++
T Consensus 180 v~~lNeLe~~-dG---~lyanvw~s~~I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 180 VELINELECA-NG---VIYANIWHSSDVLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp CCCEEEEEEE-TT---EEEEEETTCSEEEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred cccccccEEe-CC---EEEEEECCCCeEEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 34567776 55 366554 4568888876532 3333321 12345678888754 44443
No 298
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.67 E-value=0.63 Score=43.60 Aligned_cols=25 Identities=28% Similarity=0.464 Sum_probs=11.4
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
|+..-|+.++.+|+|++|+..|-+.
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~a 31 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKV 31 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333444444444444444444443
No 299
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.65 E-value=0.95 Score=53.71 Aligned_cols=190 Identities=14% Similarity=0.154 Sum_probs=105.4
Q ss_pred CCCeEEEee-CCCEEEEEecCCeEEEEcC-CCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 25 SGNITCCSS-GRGKVVIGCDDGAVSLLDR-GLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 25 ~~~is~~~~-~~~~l~~gs~dG~i~~~d~-~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
...|.|+.. ..+.|.+||.+| +..||. +.+...........|.++.. .+|.+.+ ++.+| |..+|.
T Consensus 62 ~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWi-gt~~G----------l~~~~~ 128 (758)
T 3ott_A 62 NTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWL-GALNG----------LYTYQL 128 (758)
T ss_dssp SSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEE-EETTE----------EEEEET
T ss_pred CceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEE-EcCCc----------ceeEeC
Confidence 345877654 568999999877 778884 33221100111235777754 4565544 34444 878887
Q ss_pred CCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-c----
Q 037368 103 DKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-D---- 177 (823)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~---- 177 (823)
.+. ....+.......|...|.++..++++. +-+|+.+ .+..++.. ..+...+. .
T Consensus 129 ~~~-----------~~~~~~~~~~~l~~~~i~~i~~d~~g~----lWigt~~-Gl~~~~~~-----~~~~~~~~~~~~~~ 187 (758)
T 3ott_A 129 QSR-----------KLTSFDTRRNGLPNNTIYSIIRTKDNQ----IYVGTYN-GLCRYIPS-----NGKFEGIPLPVHSS 187 (758)
T ss_dssp TTC-----------CEEEECHHHHCCSCSCEEEEEECTTCC----EEEEETT-EEEEEETT-----TTEEEEECCCCCTT
T ss_pred CCC-----------eEEEeccCCCCcCCCeEEEEEEcCCCC----EEEEeCC-CHhhCccC-----CCceEEecCCCccc
Confidence 532 122221001112223488998888765 4556644 46666642 11111111 1
Q ss_pred -CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEeeCCeEEEEecC
Q 037368 178 -NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVD 251 (823)
Q Consensus 178 -~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~ 251 (823)
....|.++....++ ..|++++.+++..|+..++. ......-....+.++...++|.+.+|.++++.+++..
T Consensus 188 ~~~~~i~~i~~d~~~--~~lWigt~~Gl~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~ 259 (758)
T 3ott_A 188 QSNLFVNSLLEDTTR--QCVWIGTEGYLFQYFPSTGQ-IKQTEAFHNNSIKSLALDGNGDLLAGTDNGLYVYHND 259 (758)
T ss_dssp CSSCCEEEEEEETTT--TEEEEEEEEEEEEEETTTTE-EEEEEEEEEEEEEEEEECTTCCEEEEETTEEEEECCT
T ss_pred cccceeEEEEEECCC--CEEEEEECCCCeEEcCCCCe-EEeccCCCCCeEEEEEEcCCCCEEEEeCCceeEEecC
Confidence 12247777765554 35777777789889875432 1111111123466777777899988888889888765
No 300
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.64 E-value=5.6 Score=42.33 Aligned_cols=55 Identities=15% Similarity=0.255 Sum_probs=42.5
Q ss_pred HHHHHhccHHHHHHHHHhc----CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 338 DMLFKKNLYTVAINLVQSQ----QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~----~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..++..++|+.|+...+.. .-++.....++...|..++..|+|++|...|-+.+.
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLT 114 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4556789999999987652 223444567888889999999999999999887643
No 301
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=94.44 E-value=4.9 Score=40.80 Aligned_cols=54 Identities=13% Similarity=0.275 Sum_probs=42.3
Q ss_pred HHHHHhccHHHHHHHHHhc----CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ----QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~----~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..++..++|+.|+...+.. .-++.....++...|..++..|+|++|...|.+.+
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 70 (338)
T 3ro2_A 13 ERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDL 70 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567889999999887752 22344456788889999999999999999987764
No 302
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.43 E-value=0.59 Score=47.28 Aligned_cols=140 Identities=13% Similarity=0.112 Sum_probs=81.7
Q ss_pred EeeCCCEEEEEe-cCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCC
Q 037368 31 CSSGRGKVVIGC-DDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 31 ~~~~~~~l~~gs-~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
++..++.|+..+ .++.+.+|| .+++.+++|..-... ..++ ++++.|+....+++ |.++|..+.
T Consensus 92 it~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~glt--~dg~~L~~SdGs~~---------i~~iDp~T~--- 156 (262)
T 3nol_A 92 ISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-WGLT--HNDQYLIMSDGTPV---------LRFLDPESL--- 156 (262)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC-CCEE--ECSSCEEECCSSSE---------EEEECTTTC---
T ss_pred EEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc-eEEe--cCCCEEEEECCCCe---------EEEEcCCCC---
Confidence 444456776555 588999999 789999888853211 2333 46666655433444 888988743
Q ss_pred CCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-c----------
Q 037368 109 GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-D---------- 177 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~---------- 177 (823)
..++++.+.....|-..++-+.+. +|.. .|.-..++.|.++|.. .+.-...+- .
T Consensus 157 -------~v~~~I~V~~~g~~~~~lNELe~~-~G~l---yan~w~~~~I~vIDp~----tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 157 -------TPVRTITVTAHGEELPELNELEWV-DGEI---FANVWQTNKIVRIDPE----TGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp -------SEEEEEECEETTEECCCEEEEEEE-TTEE---EEEETTSSEEEEECTT----TCBEEEEEECTTGGGGSCSCC
T ss_pred -------eEEEEEEeccCCccccccceeEEE-CCEE---EEEEccCCeEEEEECC----CCcEEEEEECCcCcccccccc
Confidence 356777654322230114456666 6666 6665567888888753 111111111 0
Q ss_pred -CCCCcceEEEeecCCeEEEEEEcCC
Q 037368 178 -NQCSVMGLGFRVDGQALQLFAVTPN 202 (823)
Q Consensus 178 -~~~~It~l~fs~dg~~~~l~~~t~~ 202 (823)
...--.||+|+|+++ .||++...
T Consensus 222 ~~~~vlNGIA~dp~~~--~lfVTGK~ 245 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHH--RLFVTGKL 245 (262)
T ss_dssp SSCCCEEEEEEETTTT--EEEEEETT
T ss_pred CcCCceEEEEEcCCCC--EEEEECCC
Confidence 012346899999874 67777653
No 303
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.34 E-value=4.7 Score=40.22 Aligned_cols=172 Identities=12% Similarity=0.093 Sum_probs=94.0
Q ss_pred eEEEeeCCCEEEEEecC---CeEEEEc-CCCeeeEeEeeccc-ceeEEEEecCCCEEEEE-ecCCCCcccccceeEEEEe
Q 037368 28 ITCCSSGRGKVVIGCDD---GAVSLLD-RGLKFNFGFQAHSS-SVLFLQQLKQRNFLVTV-GEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 28 is~~~~~~~~l~~gs~d---G~i~~~d-~~~~~~~~~~~H~~-~V~~i~~~~~~~~l~s~-s~D~~~~~~~~~~~vkvWd 101 (823)
.-..+++++.|+.++.. ..|+.+| .+++.+++..-... ---.+.+. ++.|..+ -.+++ +.++|
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~---------v~v~D 91 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHE---------GFVYD 91 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE---------EEEEE
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCE---------EEEEE
Confidence 34556666877666543 4899999 78888877653321 11234443 4455444 44554 99999
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE--ecCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--VDNQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~~~~ 179 (823)
..+. ..++++... ..-+.+ ++|+.. +.+.-.+++|.++|..- ....+.+ ....
T Consensus 92 ~~tl----------~~~~ti~~~------~~Gwgl--t~dg~~---L~vSdgs~~l~~iDp~t----~~~~~~I~V~~~g 146 (243)
T 3mbr_X 92 LATL----------TPRARFRYP------GEGWAL--TSDDSH---LYMSDGTAVIRKLDPDT----LQQVGSIKVTAGG 146 (243)
T ss_dssp TTTT----------EEEEEEECS------SCCCEE--EECSSC---EEEECSSSEEEEECTTT----CCEEEEEECEETT
T ss_pred CCcC----------cEEEEEeCC------CCceEE--eeCCCE---EEEECCCCeEEEEeCCC----CeEEEEEEEccCC
Confidence 8743 356666532 112444 456777 77776788888887631 1111111 1222
Q ss_pred C---CcceEEEeecCCeEEEEEEc--CCeEEEEEecCCCCcceEEc-------------cCCCccceecccCCC-eEEEe
Q 037368 180 C---SVMGLGFRVDGQALQLFAVT--PNSVILFSLQNQPPKRQFLD-------------NIGCSTNSVAMSDRL-ELIIG 240 (823)
Q Consensus 180 ~---~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~~~~~~~~l~-------------~~~~~~~~~~~s~~~-~liv~ 240 (823)
. .++.|.|. +| .+++.. .+.|.+.|..+.. ....++ ..+.-++.++++|++ +|.+.
T Consensus 147 ~~~~~lNeLe~~-~G---~lyanvw~s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 147 RPLDNLNELEWV-NG---ELLANVWLTSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EECCCEEEEEEE-TT---EEEEEETTTTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred cccccceeeEEe-CC---EEEEEECCCCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 2 34456654 45 355553 4568888876432 222222 112345678888744 44444
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.32 E-value=1.6 Score=45.74 Aligned_cols=188 Identities=12% Similarity=0.034 Sum_probs=93.7
Q ss_pred CeEEEeeCCCEEEEEecCCeEEEEcCCCe---eeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 27 NITCCSSGRGKVVIGCDDGAVSLLDRGLK---FNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 27 ~is~~~~~~~~l~~gs~dG~i~~~d~~~~---~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
.+.++.+.++.+++++..|.|..-.-.|+ .+..-..+.+.+..|.+.+++..++.+ +++. +.+-+|-.
T Consensus 81 ~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~--------v~~S~DgG 151 (327)
T 2xbg_A 81 RFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGA--------IYRTKDSG 151 (327)
T ss_dssp EEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCC--------EEEESSTT
T ss_pred cEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCcc--------EEEEcCCC
Confidence 35666665666666667787666442233 221111234567888887777666544 5554 03433322
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEE-EcccccccccceeEE-ecCCCC
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCI-KGDIARERITRFKLQ-VDNQCS 181 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~-~~~~~~~~~~k~~~~-~~~~~~ 181 (823)
. .-..+.. ..+ ..+.+++++|++.. +++|. +|.+... +. .+.....+ ......
T Consensus 152 ~------------tW~~~~~---~~~-~~~~~~~~~~~~~~---~~~g~-~G~~~~S~d~-----gG~tW~~~~~~~~~~ 206 (327)
T 2xbg_A 152 K------------NWQALVQ---EAI-GVMRNLNRSPSGEY---VAVSS-RGSFYSTWEP-----GQTAWEPHNRTTSRR 206 (327)
T ss_dssp S------------SEEEEEC---SCC-CCEEEEEECTTSCE---EEEET-TSSEEEEECT-----TCSSCEEEECCSSSC
T ss_pred C------------CCEEeec---CCC-cceEEEEEcCCCcE---EEEEC-CCcEEEEeCC-----CCCceeECCCCCCCc
Confidence 1 1112211 111 33889999999877 77765 5665543 21 01111222 123456
Q ss_pred cceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceE-Ec--cCCCccceecccCCCeEEEee-CCeEEEEecC
Q 037368 182 VMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQF-LD--NIGCSTNSVAMSDRLELIIGR-PEAVYFYEVD 251 (823)
Q Consensus 182 It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~-l~--~~~~~~~~~~~s~~~~liv~~-~~~I~i~~~~ 251 (823)
+.++.+.+++ .+++++..+.++....++....... .. ..+..+.++.+.+++.+++++ ++.| +++.+
T Consensus 207 ~~~~~~~~~g--~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~D 277 (327)
T 2xbg_A 207 LHNMGFTPDG--RLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQD 277 (327)
T ss_dssp EEEEEECTTS--CEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESS
T ss_pred cceeEECCCC--CEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCC
Confidence 8889988877 3444444445555432211111110 01 112235566777777766554 4455 44444
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.30 E-value=0.1 Score=61.45 Aligned_cols=223 Identities=9% Similarity=-0.090 Sum_probs=120.5
Q ss_pred EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEE-ecCCCCcccccceeEEEEeCCCCCCCCCCCCCC
Q 037368 37 KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTV-GEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSP 115 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~-s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~ 115 (823)
+|+++ ..+.|+..+..+.....+..--..+..|++++.++.|.-+ ...+. |..+++..... +..
T Consensus 379 ~ll~~-~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~---------I~~~~~~g~~~-----~~~ 443 (699)
T 1n7d_A 379 YLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM---------ICSTQLDRAHG-----VSS 443 (699)
T ss_dssp CBCCC-CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTS---------BEEEESCCCCC------CC
T ss_pred eEEec-CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCe---------EEEEecCCCCC-----Ccc
Confidence 34443 3457777774333221222223456788998866665544 33444 88888874110 000
Q ss_pred ceEEEEEeccCCCCCCceEEEEEecCC-CCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcceEEEeecCCe
Q 037368 116 DCIGILRVFTSQFPEAKITSFLVLEEA-PPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGFRVDGQA 193 (823)
Q Consensus 116 ~~~~~~~~~~~~~p~~~v~~va~~~d~-~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~fs~dg~~ 193 (823)
....+. . .. ..+..+|+++.+ .. +++-..++.|.+++.+ +...+++.. .-....+|++.|.+
T Consensus 444 -~~~~i~--~-~~--~~P~glavD~~~g~L---Y~tD~~~~~I~v~d~d-----g~~~~~l~~~~~~~P~giavDp~~-- 507 (699)
T 1n7d_A 444 -YDTVIS--R-DI--QAPDGLAVDWIHSNI---YWTDSVLGTVSVADTK-----GVKRKTLFREQGSKPRAIVVDPVH-- 507 (699)
T ss_dssp -CCCBCC--S-CC----CCCEECCCSSSBC---EECCTTTSCEEEEBSS-----SCCEEEECCCSSCCCCCEECCSSS--
T ss_pred -eEEEEe--C-CC--CCcceEEEEeeCCcE---EEEeccCCeEEEEecC-----CCceEEEEeCCCCCcceEEEccCC--
Confidence 000000 0 00 114678888644 44 4444556788877643 222333332 22446789998865
Q ss_pred EEEEEEcC---CeEEEEEecCCCCcceEE-ccCCCccceecccCC-CeEEEee--CCeEEEEecCCCCcccccc-----C
Q 037368 194 LQLFAVTP---NSVILFSLQNQPPKRQFL-DNIGCSTNSVAMSDR-LELIIGR--PEAVYFYEVDGRGPCWAFE-----G 261 (823)
Q Consensus 194 ~~l~~~t~---~~V~~~d~~~~~~~~~~l-~~~~~~~~~~~~s~~-~~liv~~--~~~I~i~~~~g~~~~~~~~-----g 261 (823)
..||++.. ..|..+++.+.. ..++ ......++.++++|+ +++.++- .+.|..++.+|......+. +
T Consensus 508 g~ly~td~~~~~~I~~~~~dG~~--~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~ 585 (699)
T 1n7d_A 508 GFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 585 (699)
T ss_dssp SCCEECCCSSSCCEEBCCSSSCC--CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCS
T ss_pred CcEEEcccCCCCeEEEEeCCCCC--eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCC
Confidence 35777753 458777776542 2233 222234567899975 5565553 3589999988754322111 2
Q ss_pred CeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCE
Q 037368 262 EKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRL 296 (823)
Q Consensus 262 ~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~ 296 (823)
++..++.++++|..+.. ..+.|..+|..++.
T Consensus 586 ~P~glavd~~~lywtd~----~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWTDI----INEAIFSANRLTGS 616 (699)
T ss_dssp SCCCCEEETTEEEEECS----TTTCEEEEETTTEE
T ss_pred CceEeEEECCEEEEEeC----CCCeEEEEEccCCC
Confidence 45677778887666543 34688888876543
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.07 E-value=4.5 Score=46.63 Aligned_cols=215 Identities=10% Similarity=-0.018 Sum_probs=116.6
Q ss_pred ecCCeEEEEcCCCee-eEeE-eecccceeEEEEecCCCEEE-EEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceE
Q 037368 42 CDDGAVSLLDRGLKF-NFGF-QAHSSSVLFLQQLKQRNFLV-TVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCI 118 (823)
Q Consensus 42 s~dG~i~~~d~~~~~-~~~~-~~H~~~V~~i~~~~~~~~l~-s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~ 118 (823)
+....|+..+-++.. ..+. ..--..+..|.+++.++.|. |=...+. |..++++... . .
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~---------I~r~~~~g~~-------~---~ 75 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEA---------IKRTEFNKTE-------S---V 75 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTE---------EEEEEC---------------C
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCe---------EEEEEccCCC-------c---e
Confidence 356678888844321 1122 22234678899998666554 4333333 8888886421 0 1
Q ss_pred EEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcceEEEeecCCeEEEE
Q 037368 119 GILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMGLGFRVDGQALQLF 197 (823)
Q Consensus 119 ~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~l~fs~dg~~~~l~ 197 (823)
.++-..+. ..+..+|+++.+.. -..+-..++.|.+.+.+ +...+++. ..-..-.+|++.|.+ ..||
T Consensus 76 ~~v~~~~~----~~P~GlAvD~~~~~--ly~~d~~~~~I~v~~~d-----G~~~~~l~~~~l~~P~~Iavdp~~--g~ly 142 (619)
T 3s94_A 76 QNVVVSGL----LSPDGLACDWLGEK--LYWTDSETNRIEVSNLD-----GSLRKVLFWQELDQPRAIALDPSS--GFMY 142 (619)
T ss_dssp EEEECSSC----SCEEEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECSSCSCCCCEEEETTT--TEEE
T ss_pred EEEEeCCC----CCcCeEEEEecCCE--EEEEeCCCCEEEEEECC-----CCCEEEEEeCCCCCCceEEEecCC--CeEE
Confidence 11111110 23789999996554 04444557888888753 22233343 333446799998864 2688
Q ss_pred EEcC---CeEEEEEecCCCCcceEEccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcccccc---CCeEEEEe
Q 037368 198 AVTP---NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAFE---GEKKLLGW 268 (823)
Q Consensus 198 ~~t~---~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~~---g~~~~i~~ 268 (823)
++.- ..|...++++.. ...+.......++.+++++ ++++.++- .+.|..++.+|.......+ .++..++.
T Consensus 143 ~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~ 221 (619)
T 3s94_A 143 WTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL 221 (619)
T ss_dssp EEECSSSCEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEE
T ss_pred EeccCCCCEEEEEECCCCc-eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEE
Confidence 8862 357777777643 2223333344567788887 56666653 3688888888764432222 24566777
Q ss_pred eCcEEEEEEecCCCCccEEEEEeCC
Q 037368 269 FRGYLLCVIADQRNSKNIFNVYDLK 293 (823)
Q Consensus 269 ~~~ylv~~s~d~~~~~~~I~I~D~~ 293 (823)
+++++..... ..+.|...|..
T Consensus 222 ~~~~ly~td~----~~~~V~~~d~~ 242 (619)
T 3s94_A 222 FEDILYWTDW----STHSILACNKY 242 (619)
T ss_dssp SSSEEEEECT----TTCSEEEEESS
T ss_pred eCCEEEEecC----CCCEEEEEECC
Confidence 7776654432 23456666654
No 307
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=93.93 E-value=1.4 Score=43.17 Aligned_cols=57 Identities=14% Similarity=0.276 Sum_probs=39.0
Q ss_pred HHHHHHHhccHHHHHHHHHhc-CC------CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ-QA------DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~-~~------~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.-..+...++|+.|++..+.. .+ +......++...|..++..|+|++|...|.+.+.
T Consensus 44 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 44 RAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 345566778888888877652 11 1112256777778888889999999988887754
No 308
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=93.90 E-value=9.5 Score=42.14 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=32.8
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+++.++|+.|++..+.. ..++. -...+...|.-++..|+|++|.+.|-+.+
T Consensus 33 ~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al 86 (537)
T 3fp2_A 33 NHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKAL 86 (537)
T ss_dssp HHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4555677888888776652 11111 13455566777777888888888877764
No 309
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.74 E-value=9.6 Score=45.18 Aligned_cols=187 Identities=7% Similarity=-0.009 Sum_probs=103.1
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcceEEEeecCCeEEEEEEcC--CeEEEEEe
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGFRVDGQALQLFAVTP--NSVILFSL 209 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~ 209 (823)
+.++++++.... .+.+-..++.|..++.+-.... .....+.. .-....+|++.+.+. .|||+.. +.|.+.++
T Consensus 426 ~~gl~~d~~~~~--lY~sD~~~~~I~~~~l~g~~~~-~~~~~vi~~~l~~P~GLAvD~~~~--~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 426 VVALDTEVASNR--IYWSDLSQRMICSTQLDRAHGV-SSYDTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADT 500 (791)
T ss_dssp EEEEEEETTTTE--EEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEET
T ss_pred eEEEeecccCCe--eEEeeccceeEEEEeccCCCCC-cceeEEEecCCCCcceeeeeecCC--cEEEEecCCCeEEEEeC
Confidence 788999985443 0444445677776654310000 11223332 345677999998773 6888753 46999998
Q ss_pred cCCCCcceEEccCCCccceecccCC-CeEEEe-eC--CeEEEEecCCCCccccccC---CeEEEEee--CcEEEEEEecC
Q 037368 210 QNQPPKRQFLDNIGCSTNSVAMSDR-LELIIG-RP--EAVYFYEVDGRGPCWAFEG---EKKLLGWF--RGYLLCVIADQ 280 (823)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~s~~-~~liv~-~~--~~I~i~~~~g~~~~~~~~g---~~~~i~~~--~~ylv~~s~d~ 280 (823)
+++. ...++......+..+++.|. |.+.++ ++ ..|...+++|......+.+ .+..|+.+ +..|..+-.
T Consensus 501 dG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~-- 577 (791)
T 3m0c_C 501 KGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS-- 577 (791)
T ss_dssp TSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET--
T ss_pred CCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC--
Confidence 7653 22223323344667888874 666554 33 4788888887654322221 36666655 455554432
Q ss_pred CCCccEEEEEeCCCCE--EEEec--cccceeEEEeecCcEEEEEcC-CeEEEEe
Q 037368 281 RNSKNIFNVYDLKNRL--IAHSL--VVKEVSHMLCEWGNIILVMTD-KSVLCIG 329 (823)
Q Consensus 281 ~~~~~~I~I~D~~~~~--i~~~~--~i~~v~~v~~~~~~~~vvs~~-~~v~~l~ 329 (823)
....|..+|+.+.. ..... .+.....+-...+.+||.... +.|+++.
T Consensus 578 --~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 578 --KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp --TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 34689999987642 22222 233333332334567777543 4555553
No 310
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=93.70 E-value=0.83 Score=46.99 Aligned_cols=255 Identities=11% Similarity=-0.009 Sum_probs=138.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCc--ChH---HHHHHhhchh
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHL--EPS---YVIQKFLDAQ 407 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~--eps---~vI~kFl~~~ 407 (823)
-.....++..++|+.|+++.+.. ..++. .......++.-++..|++++|...|-+.+... .+. ....-+...+
T Consensus 26 ~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (330)
T 3hym_B 26 VSLAERHYYNCDFKMCYKLTSVVMEKDPF-HASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVG 104 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCC-ChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhh
Confidence 56678888899999999987752 11111 12334456677788999999999887765321 121 1122233344
Q ss_pred -hHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChh----hHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHH
Q 037368 408 -RIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVE----KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYV 482 (823)
Q Consensus 408 -~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~----~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~l 482 (823)
+.+.-..++.........+......+-.+|.++++.+ .+.+-++..+ ....-.-..-.++...|.+++|+.+
T Consensus 105 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~l~~~~~~~~~~~~A~~~ 181 (330)
T 3hym_B 105 HKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMK---GCHLPMLYIGLEYGLTNNSKLAERF 181 (330)
T ss_dssp SCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTT---TCSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5555555666544434334444555667888777753 3344444333 1111112234456678888888887
Q ss_pred HHHh----CChHHH----HHHHHHhhcCHHHHHHHHhcCCh-----------HHHHHHHHHHHHHHHh-cCCHHHHHHHH
Q 037368 483 AKKA----GKHELY----LKILLEDLGRYDEALQYISSLDP-----------SQAGVTVKEYGKILIE-HKPMETIDILL 542 (823)
Q Consensus 483 a~~~----~~~~~~----l~il~~~~~~~~~al~yl~~l~~-----------~~~~~~i~k~~~~Ll~-~~p~~~~~ll~ 542 (823)
.++. ..+..+ ..++. ..+++++|+.++.+.-. +.....+...|..+.. ...+++++.+.
T Consensus 182 ~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 260 (330)
T 3hym_B 182 FSQALSIAPEDPFVMHEVGVVAF-QNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHR 260 (330)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHH-HcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 7742 222222 23333 34999999999876311 1112344555554443 45677888776
Q ss_pred HHhhcCCCCcccCCCCCcccCCCCCHH-HHHhhh--ccCcHHHHHHHHHHHhhcCCCCchhhHHHHHHHHh
Q 037368 543 RLCTEDGESTKRGASSSTYMSMLPSPV-DFLNIF--VHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELY 610 (823)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f--~~~~~~~~~yLe~~i~~~~~~~~~~~~~n~llely 610 (823)
+...-. | ..+..- .+..++ .++.+....+++.++...++. ...+..+...|
T Consensus 261 ~a~~~~--~------------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~ 314 (330)
T 3hym_B 261 QALVLI--P------------QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDD---TFSVTMLGHCI 314 (330)
T ss_dssp HHHHHS--T------------TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC---HHHHHHHHHHH
T ss_pred HHHhhC--c------------cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCc---hHHHHHHHHHH
Confidence 654321 0 011111 111111 246677788888887765532 34555555544
No 311
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=93.63 E-value=0.57 Score=48.18 Aligned_cols=55 Identities=9% Similarity=-0.062 Sum_probs=39.9
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+. ....+...|..++..|+|++|...|-+.+.
T Consensus 62 ~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 117 (327)
T 3cv0_A 62 GLTQAENEKDGLAIIALNHARMLDPK-DIAVHAALAVSHTNEHNANAALASLRAWLL 117 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45566789999999987752 11111 234566778888999999999999988753
No 312
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.62 E-value=2.8 Score=44.04 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 333 MESKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 333 ~~~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..-..+++.++|+.|+++.+.. ...+. ....+...|..++..|+|++|...|-+.+
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al 126 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCL 126 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 455567788889999999988762 11111 24566777888889999999999988764
No 313
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.56 E-value=15 Score=43.24 Aligned_cols=186 Identities=12% Similarity=0.125 Sum_probs=106.8
Q ss_pred CeEEEeeCCCEEEEEecCCeEEEEcCCCeeeEeEeec-----ccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEe
Q 037368 27 NITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQAH-----SSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFD 101 (823)
Q Consensus 27 ~is~~~~~~~~l~~gs~dG~i~~~d~~~~~~~~~~~H-----~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWd 101 (823)
.|.+++..++.|.+||.+| |..++........+... ...|.+|..+++|.+.+.. .+| |..++
T Consensus 104 ~i~~i~~~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~G----------l~~~~ 171 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALNG-LYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGT-YNG----------LCRYI 171 (758)
T ss_dssp CEEEEEEETTEEEEEETTE-EEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEE-TTE----------EEEEE
T ss_pred eEEEEEecCCcEEEEcCCc-ceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEe-CCC----------HhhCc
Confidence 4777766778899999874 77888443333344211 2468899988888876643 444 77777
Q ss_pred CCCCCCCCCCCCCCceEEEEEeccC-CCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCC
Q 037368 102 LDKMEPEGTSSTSPDCIGILRVFTS-QFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQ 179 (823)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~ 179 (823)
.... ....+..... ..+...|.++..++++.. +-+|+. +.+..++.. ..+..... -..
T Consensus 172 ~~~~-----------~~~~~~~~~~~~~~~~~i~~i~~d~~~~~---lWigt~-~Gl~~~~~~-----~~~~~~~~~l~~ 231 (758)
T 3ott_A 172 PSNG-----------KFEGIPLPVHSSQSNLFVNSLLEDTTRQC---VWIGTE-GYLFQYFPS-----TGQIKQTEAFHN 231 (758)
T ss_dssp TTTT-----------EEEEECCCCCTTCSSCCEEEEEEETTTTE---EEEEEE-EEEEEEETT-----TTEEEEEEEEEE
T ss_pred cCCC-----------ceEEecCCCccccccceeEEEEEECCCCE---EEEEEC-CCCeEEcCC-----CCeEEeccCCCC
Confidence 6531 1111111000 001123888988887776 677774 456666642 11111111 113
Q ss_pred CCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEcc--------CCCccceecccCCCeEEEeeCCeEEEEe
Q 037368 180 CSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDN--------IGCSTNSVAMSDRLELIIGRPEAVYFYE 249 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~--------~~~~~~~~~~s~~~~liv~~~~~I~i~~ 249 (823)
..|.+|....+| .|+++|.+++..|+..... . ..+.. ....+.++....+|.+.+|..+++.++.
T Consensus 232 ~~i~~i~~d~~g---~lWigT~~Gl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~Gl~~~~ 304 (758)
T 3ott_A 232 NSIKSLALDGNG---DLLAGTDNGLYVYHNDTTP-L-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYGISLSR 304 (758)
T ss_dssp EEEEEEEECTTC---CEEEEETTEEEEECCTTSC-C-EEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSSEEEEC
T ss_pred CeEEEEEEcCCC---CEEEEeCCceeEEecCCCc-E-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCcccccc
Confidence 457887766665 4777778899888865432 1 22210 1123556666678888888766666553
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.49 E-value=8.9 Score=40.49 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=54.7
Q ss_pred ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC---C
Q 037368 66 SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE---A 142 (823)
Q Consensus 66 ~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d---~ 142 (823)
.-..|+++|+|.++++-. ++. |.+++ +. ....+..+.+... .......++++|| +
T Consensus 32 ~P~~ia~~pdG~l~V~e~-~g~---------I~~i~-~g---------~~~~~~~~~v~~~--g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAER-PGR---------IRLFR-EG---------RLSTYAELSVYHR--GESGLLGLALHPRFPQE 89 (352)
T ss_dssp CEEEEEECTTSCEEEEET-TTE---------EEEEE-TT---------EEEEEEECCCCCS--TTCSEEEEEECTTTTTS
T ss_pred CceEEEEcCCCeEEEEeC-CCe---------EEEEE-CC---------CccEeecceEeec--CCCCceeEEECCCCCCC
Confidence 457899999999777653 465 88887 32 1111212111110 0123799999998 3
Q ss_pred CCcceEEEEEe-C-----CeEEEEEcccccccccceeEEe---c---C-CCCcceEEEeecCCeEEEEEEc
Q 037368 143 PPILLIAIGLD-N-----GCIYCIKGDIARERITRFKLQV---D---N-QCSVMGLGFRVDGQALQLFAVT 200 (823)
Q Consensus 143 ~~~~~ia~G~~-d-----G~V~l~~~~~~~~~~~k~~~~~---~---~-~~~It~l~fs~dg~~~~l~~~t 200 (823)
.. +-+... + +.|..++.+ ...-...+.+. . . .....+|+|.+|| .|+++.
T Consensus 90 g~---lYv~~~~~~~~~~~~v~r~~~~--~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG---~Lyv~~ 152 (352)
T 2ism_A 90 PY---VYAYRTVAEGGLRNQVVRLRHL--GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG---MLYVTT 152 (352)
T ss_dssp CE---EEEEEEECTTSSEEEEEEEEEC--SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS---CEEEEC
T ss_pred CE---EEEEEecCCCCCccEEEEEEeC--CCCcCceEEEEEeCCCCCCCCcCCceEEECCCC---CEEEEE
Confidence 33 433332 2 456656532 00000112222 1 1 1234689999998 366664
No 315
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.48 E-value=5.2 Score=41.75 Aligned_cols=184 Identities=11% Similarity=0.057 Sum_probs=93.3
Q ss_pred eEEEe-eCCCEEEEEecCCeEEE-Ec--CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCC
Q 037368 28 ITCCS-SGRGKVVIGCDDGAVSL-LD--RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLD 103 (823)
Q Consensus 28 is~~~-~~~~~l~~gs~dG~i~~-~d--~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~ 103 (823)
+..+. .+++.++.++.+|.|.. .| .+++.+ ..++...+..+.+.+++.+++.+ .++. +.+-+|-.
T Consensus 124 ~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g-~~G~--------~~~S~d~g 192 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITNVGAIYRTKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVS-SRGS--------FYSTWEPG 192 (327)
T ss_dssp EEEEEEEETTEEEEEETTCCEEEESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEE-TTSS--------EEEEECTT
T ss_pred eEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEE-CCCc--------EEEEeCCC
Confidence 43343 34566655556776644 34 223322 23456688999999988777654 4443 14445431
Q ss_pred CCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-c---CC
Q 037368 104 KMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-D---NQ 179 (823)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~---~~ 179 (823)
.. + -..+.. . .+ ..+..+++++++.. ++++ .+|.+.+.+.| .+.....+. . ..
T Consensus 193 G~--------t---W~~~~~-~--~~-~~~~~~~~~~~g~~---~~~~-~~G~~~~s~~D----~G~tW~~~~~~~~~~~ 249 (327)
T 2xbg_A 193 QT--------A---WEPHNR-T--TS-RRLHNMGFTPDGRL---WMIV-NGGKIAFSDPD----NSENWGELLSPLRRNS 249 (327)
T ss_dssp CS--------S---CEEEEC-C--SS-SCEEEEEECTTSCE---EEEE-TTTEEEEEETT----EEEEECCCBCTTSSCC
T ss_pred CC--------c---eeECCC-C--CC-CccceeEECCCCCE---EEEe-CCceEEEecCC----CCCeeEeccCCcccCC
Confidence 10 1 111111 1 11 23889999998865 5554 57887766321 111111111 1 12
Q ss_pred CCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEc---cCCCccceecccCCCeEEEe-eCCeEEEEe
Q 037368 180 CSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLD---NIGCSTNSVAMSDRLELIIG-RPEAVYFYE 249 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~---~~~~~~~~~~~s~~~~liv~-~~~~I~i~~ 249 (823)
..+.++.|.+++ .+++++..+.| .+..++.... ..+. .....+.++.+.++++++++ .++.|.-++
T Consensus 250 ~~~~~v~~~~~~--~~~~~g~~g~i-~~S~DgG~tW-~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 250 VGFLDLAYRTPN--EVWLAGGAGAL-LCSQDGGQTW-QQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp SCEEEEEESSSS--CEEEEESTTCE-EEESSTTSSC-EECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred cceEEEEecCCC--EEEEEeCCCeE-EEeCCCCccc-EEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 347888888766 34555555555 4444432222 2221 12234567777667776554 445655544
No 316
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=93.22 E-value=0.38 Score=47.71 Aligned_cols=53 Identities=9% Similarity=0.036 Sum_probs=36.7
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|-+.+
T Consensus 45 ~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 98 (252)
T 2ho1_A 45 LGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKAL 98 (252)
T ss_dssp HHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455678899998877652 11111 23556677888889999999999987764
No 317
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.20 E-value=0.29 Score=48.10 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=29.1
Q ss_pred HHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..++..++|+.|+.+.+.. ...+. ...++...|..++..|+|++|...|.+.+
T Consensus 29 ~a~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 84 (243)
T 2q7f_A 29 QMGRGSEFGDYEKAAEAFTKAIEENKE-DAIPYINFANLLSSVNELERALAFYDKAL 84 (243)
T ss_dssp -------------CCTTHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344556678888888766652 12111 24566677888899999999999988764
No 318
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.81 E-value=12 Score=40.22 Aligned_cols=187 Identities=11% Similarity=-0.055 Sum_probs=97.7
Q ss_pred eEEEeeC--CCEEEEEe-cCCeEEEEcCCCe----eeEeEee-cccceeEEEEec-CCCEEEEEecCCCCcccccceeEE
Q 037368 28 ITCCSSG--RGKVVIGC-DDGAVSLLDRGLK----FNFGFQA-HSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLK 98 (823)
Q Consensus 28 is~~~~~--~~~l~~gs-~dG~i~~~d~~~~----~~~~~~~-H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vk 98 (823)
+..++.+ .+.|+..+ ..+.|+.++.++. ....+-. --.....|++++ .+++.++-+..+. |.
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~---------I~ 184 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT---------VS 184 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE---------EE
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCe---------EE
Confidence 3444443 35565544 4567777774431 1112222 235678899997 4555566555555 88
Q ss_pred EEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-e-CCeEEEEEcccccccccceeEEe
Q 037368 99 VFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-D-NGCIYCIKGDIARERITRFKLQV 176 (823)
Q Consensus 99 vWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~-dG~V~l~~~~~~~~~~~k~~~~~ 176 (823)
+.+++.. ...++- .... ..+..++++|.+.. +...- . .+.|...+.+ +...+++.
T Consensus 185 ~~~~~g~-----------~~~~l~-~~~~---~~P~~iavdp~~g~---ly~td~~~~~~I~~~~~d-----G~~~~~~~ 241 (400)
T 3p5b_L 185 VADTKGV-----------KRKTLF-RENG---SKPRAIVVDPVHGF---MYWTDWGTPAKIKKGGLN-----GVDIYSLV 241 (400)
T ss_dssp EECTTTC-----------SEEEEE-ECSS---CCEEEEEEETTTTE---EEEEECSSSCCEEEEETT-----SCSCEEEE
T ss_pred EEeCCCC-----------ceEEEE-eCCC---CCcceEEEecccCe---EEEEeCCCCCEEEEEeCC-----CCccEEEE
Confidence 8888742 122221 1111 22799999997655 54433 2 3566666542 22233333
Q ss_pred c-CCCCcceEEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCC--CccceecccCCCeEEEeeC-CeEEEEe
Q 037368 177 D-NQCSVMGLGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIG--CSTNSVAMSDRLELIIGRP-EAVYFYE 249 (823)
Q Consensus 177 ~-~~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~--~~~~~~~~s~~~~liv~~~-~~I~i~~ 249 (823)
. .-..-++|++++++ ..||++.. +.|..+++++.. ...+....+ ..+..+++..+.-+++-+. +.|..++
T Consensus 242 ~~~l~~P~glavd~~~--~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 242 TENIQWPNGITLDLLS--GRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp CSSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ECCCCceEEEEEEeCC--CEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 2 22456799999876 36888853 469999987643 223333211 1223444433323334443 4677666
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.74 E-value=17 Score=41.69 Aligned_cols=204 Identities=11% Similarity=0.020 Sum_probs=113.2
Q ss_pred EEEEEecCCeEEEEcCC-Cee-eEeEeec-ccceeEEEEecCCCE-EEEEecCCCCcccccceeEEEEeCCCCCCCCCCC
Q 037368 37 KVVIGCDDGAVSLLDRG-LKF-NFGFQAH-SSSVLFLQQLKQRNF-LVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSS 112 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~-~~~-~~~~~~H-~~~V~~i~~~~~~~~-l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~ 112 (823)
+|+++. .+.|+..+-. ... ...+... -..+..|.+++.++. .+|=...+. |..++++...
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~---------I~r~~~~g~~------ 382 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRA---------IRRSFIDGSG------ 382 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTE---------EEEEETTSCS------
T ss_pred EEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCe---------EEEEEcCCCc------
Confidence 455554 4566666622 111 1112212 145778999985544 444334444 8888887421
Q ss_pred CCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-cCCCCcceEEEeecC
Q 037368 113 TSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-DNQCSVMGLGFRVDG 191 (823)
Q Consensus 113 ~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~~~~~It~l~fs~dg 191 (823)
. .++-.... ..+..+|+++.+.. -..+=+..+.|.+.+.+ +...+++. +.-..-.+|++.|..
T Consensus 383 --~---~~v~~~~~----~~p~GlAvD~~~~~--lY~tD~~~~~I~v~~~~-----G~~~~~l~~~~l~~P~~iavdp~~ 446 (619)
T 3s94_A 383 --S---QFVVTAQI----AHPDGIAVDWVARN--LYWTDTGTDRIEVTRLN-----GTMRKILISEDLEEPRAIVLDPMV 446 (619)
T ss_dssp --C---EEEECSSC----SCCCEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECTTCCSEEEEEEETTT
T ss_pred --c---EEEEECCC----CCcCceEEecccCc--EEEEeCCCCcEEEEeCC-----CCeEEEEEECCCCCeeeEEEEcCC
Confidence 1 12211111 12578999975443 04444556788877643 22233443 233456899998863
Q ss_pred CeEEEEEEcC---CeEEEEEecCCCCcceEE-ccCCCccceecccC-CCeEEEee--CCeEEEEecCCCCcccccc---C
Q 037368 192 QALQLFAVTP---NSVILFSLQNQPPKRQFL-DNIGCSTNSVAMSD-RLELIIGR--PEAVYFYEVDGRGPCWAFE---G 261 (823)
Q Consensus 192 ~~~~l~~~t~---~~V~~~d~~~~~~~~~~l-~~~~~~~~~~~~s~-~~~liv~~--~~~I~i~~~~g~~~~~~~~---g 261 (823)
..||++.- .+|...++++.. ..++ ...-..++.+++++ ++++.++- .+.|..++.+|......+. .
T Consensus 447 --G~ly~tD~g~~~~I~r~~~dG~~--~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~ 522 (619)
T 3s94_A 447 --GYMYWTDWGEIPKIERAALDGSD--RVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIP 522 (619)
T ss_dssp --TEEEEEECSSSCEEEEEETTSCS--CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCC
T ss_pred --CcEEEecCCCCCEEEEEccCCCc--cEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCC
Confidence 26888853 457777777643 2333 32234566788886 66776663 3578889988765432222 2
Q ss_pred CeEEEEeeCcEEEEE
Q 037368 262 EKKLLGWFRGYLLCV 276 (823)
Q Consensus 262 ~~~~i~~~~~ylv~~ 276 (823)
++..++.++++|...
T Consensus 523 ~P~glav~~~~ly~t 537 (619)
T 3s94_A 523 HIFGFTLLGDYVYWT 537 (619)
T ss_dssp SSCCEEEETTEEEEE
T ss_pred CcEEEEEECCEEEEe
Confidence 466777788776555
No 320
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=92.71 E-value=1.3 Score=42.44 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=38.3
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|-+.+.
T Consensus 15 ~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 70 (225)
T 2vq2_A 15 AMEYMRGQDYRQATASIEDALKSDPK-NELAWLVRAEIYQYLKVNDKAQESFRQALS 70 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 45566789999999877652 11111 134566678888899999999998887643
No 321
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.65 E-value=0.85 Score=48.13 Aligned_cols=57 Identities=11% Similarity=-0.095 Sum_probs=41.5
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..-..+...++|+.|++..+.. .+.+. ....+...|.-+...|+|++|...|-+.+.
T Consensus 104 ~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 161 (365)
T 4eqf_A 104 FLGITQAENENEQAAIVALQRCLELQPN-NLKALMALAVSYTNTSHQQDACEALKNWIK 161 (365)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 3456677889999999988762 11111 235666778889999999999999988753
No 322
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.64 E-value=10 Score=38.87 Aligned_cols=145 Identities=16% Similarity=0.213 Sum_probs=84.0
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeecCCeEEEEEEc--CCe--EEEEE
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVT--PNS--VILFS 208 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~--V~~~d 208 (823)
...++++++++. +++-..+|.|..|+.+ + +........+...+|++.++|+ ++++. .++ |..++
T Consensus 34 pegia~~~~g~l---yv~d~~~~~I~~~d~~-----g-~~~~~~~~~~~p~gia~~~dG~---l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 34 LENLASAPDGTI---FVTNHEVGEIVSITPD-----G-NQQIHATVEGKVSGLAFTSNGD---LVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEEECTTSCE---EEEETTTTEEEEECTT-----C-CEEEEEECSSEEEEEEECTTSC---EEEEEECTTSCEEEEEE
T ss_pred cceEEECCCCCE---EEEeCCCCeEEEECCC-----C-ceEEEEeCCCCceeEEEcCCCc---EEEEeccCCcceEEEEc
Confidence 789999999887 7777678999888643 1 2222333345688999999983 45554 334 66666
Q ss_pred ecCCCCcceEEcc-CCCccceecccCCCeEEEee--CCeEEEEecCCC-Cccc---------cc-cC--CeEEEEeeCcE
Q 037368 209 LQNQPPKRQFLDN-IGCSTNSVAMSDRLELIIGR--PEAVYFYEVDGR-GPCW---------AF-EG--EKKLLGWFRGY 272 (823)
Q Consensus 209 ~~~~~~~~~~l~~-~~~~~~~~~~s~~~~liv~~--~~~I~i~~~~g~-~~~~---------~~-~g--~~~~i~~~~~y 272 (823)
..+. ........ .....+..+..+++.++++. .+.|++++..+. +..+ .. .+ .+..+++.+.+
T Consensus 102 ~~~g-~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ 180 (306)
T 2p4o_A 102 KSDG-TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNF 180 (306)
T ss_dssp CTTS-CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTE
T ss_pred CCCC-eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCE
Confidence 5432 22222221 11222333434566655543 468888887532 1111 00 11 24566777777
Q ss_pred EEEEEecCCCCccEEEEEeCCC
Q 037368 273 LLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 273 lv~~s~d~~~~~~~I~I~D~~~ 294 (823)
+.+... ..++|.++|+..
T Consensus 181 lyv~d~----~~~~I~~~~~~~ 198 (306)
T 2p4o_A 181 LYVSNT----EKMLLLRIPVDS 198 (306)
T ss_dssp EEEEET----TTTEEEEEEBCT
T ss_pred EEEEeC----CCCEEEEEEeCC
Confidence 766543 357899999864
No 323
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=92.43 E-value=12 Score=39.23 Aligned_cols=56 Identities=13% Similarity=0.246 Sum_probs=43.6
Q ss_pred HHHHHHHhccHHHHHHHHHhc----CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ----QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~----~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..++..++|+.|+...+.. .-++.....++...|..++..|+|++|...|-+.+
T Consensus 15 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 74 (406)
T 3sf4_A 15 EGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDL 74 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 345677889999999988752 22344456788889999999999999999987764
No 324
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.38 E-value=2.5 Score=42.82 Aligned_cols=139 Identities=12% Similarity=0.004 Sum_probs=81.1
Q ss_pred EeeCCCEEEEE-ecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCC
Q 037368 31 CSSGRGKVVIG-CDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPE 108 (823)
Q Consensus 31 ~~~~~~~l~~g-s~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~ 108 (823)
++..++.|+.. -.++.+.+|| .+++.+++|..- +.=+.++ ++++.|+.+..+++ |.++|..+.
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~---------l~~iDp~T~--- 165 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTM---------LTFHEPDGF--- 165 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSE---------EEEECTTTC---
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCE---------EEEEcCCCC---
Confidence 44555566544 4788999999 789999898852 2224444 45666665543444 999998743
Q ss_pred CCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-c----------
Q 037368 109 GTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-D---------- 177 (823)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~---------- 177 (823)
..++++.+...+.|-..++-+.+. +|.. .|.-..++.|.++|.. .+.-...+- .
T Consensus 166 -------~v~~~I~V~~~g~~v~~lNeLe~~-dG~l---yanvw~s~~I~vIDp~----TG~V~~~Idl~~L~~~~~~~~ 230 (268)
T 3nok_A 166 -------ALVGAVQVKLRGQPVELINELECA-NGVI---YANIWHSSDVLEIDPA----TGTVVGVIDASALTRAVAGQV 230 (268)
T ss_dssp -------CEEEEEECEETTEECCCEEEEEEE-TTEE---EEEETTCSEEEEECTT----TCBEEEEEECHHHHHHHTTTC
T ss_pred -------eEEEEEEeCCCCcccccccccEEe-CCEE---EEEECCCCeEEEEeCC----CCcEEEEEECCCCcccccccc
Confidence 356777664322221124556666 6655 6555567788888752 111111110 0
Q ss_pred --CCCCcceEEEeecCCeEEEEEEcC
Q 037368 178 --NQCSVMGLGFRVDGQALQLFAVTP 201 (823)
Q Consensus 178 --~~~~It~l~fs~dg~~~~l~~~t~ 201 (823)
...--++|+|+++++ .||++..
T Consensus 231 ~~~~~vlNGIA~dp~~~--rlfVTGK 254 (268)
T 3nok_A 231 TNPEAVLNGIAVEPGSG--RIFMTGK 254 (268)
T ss_dssp CCTTCCEEEEEECTTTC--CEEEEET
T ss_pred cCcCCceEEEEEcCCCC--EEEEeCC
Confidence 112346899998873 5666653
No 325
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.38 E-value=18 Score=41.05 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=24.0
Q ss_pred eCCCEEEEEecCCeEEEEc-CCCeeeEeEe
Q 037368 33 SGRGKVVIGCDDGAVSLLD-RGLKFNFGFQ 61 (823)
Q Consensus 33 ~~~~~l~~gs~dG~i~~~d-~~~~~~~~~~ 61 (823)
..++.+++++.+|.|..+| .+|+.+.+++
T Consensus 113 ~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 142 (571)
T 2ad6_A 113 YGAGQIVKKQANGHLLALDAKTGKINWEVE 142 (571)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EECCEEEEEeCCCEEEEEECCCCCEEEEec
Confidence 3467899999999999999 7899876655
No 326
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=91.98 E-value=3.6 Score=41.07 Aligned_cols=138 Identities=13% Similarity=0.116 Sum_probs=77.8
Q ss_pred eeCCCEEEEE-ecCCeEEEEc-CCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCC
Q 037368 32 SSGRGKVVIG-CDDGAVSLLD-RGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEG 109 (823)
Q Consensus 32 ~~~~~~l~~g-s~dG~i~~~d-~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~ 109 (823)
+..++.|+.. -.++.+.+|| .+++.+.+|..-... ..++ ++++.|...-.+++ |.++|..+.
T Consensus 71 ~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~---------l~~iDp~t~---- 134 (243)
T 3mbr_X 71 VAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAV---------IRKLDPDTL---- 134 (243)
T ss_dssp EEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSE---------EEEECTTTC----
T ss_pred EEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCe---------EEEEeCCCC----
Confidence 3345666544 4789999999 789999898853322 3444 35555544322343 999998743
Q ss_pred CCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEe-c-----------
Q 037368 110 TSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQV-D----------- 177 (823)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~-~----------- 177 (823)
..++++.+...+.|=..++-+.+. ++.. .|.-..+..|.++|.. .+.-...+- .
T Consensus 135 ------~~~~~I~V~~~g~~~~~lNeLe~~-~G~l---yanvw~s~~I~vIDp~----tG~V~~~idl~~l~~~~~~~~~ 200 (243)
T 3mbr_X 135 ------QQVGSIKVTAGGRPLDNLNELEWV-NGEL---LANVWLTSRIARIDPA----SGKVVAWIDLQALVPDADALTD 200 (243)
T ss_dssp ------CEEEEEECEETTEECCCEEEEEEE-TTEE---EEEETTTTEEEEECTT----TCBEEEEEECGGGSTTTTSCCC
T ss_pred ------eEEEEEEEccCCcccccceeeEEe-CCEE---EEEECCCCeEEEEECC----CCCEEEEEECCcCccccccccC
Confidence 356777665332221124455555 5555 5555556778777652 111111110 0
Q ss_pred -CCCCcceEEEeecCCeEEEEEEcC
Q 037368 178 -NQCSVMGLGFRVDGQALQLFAVTP 201 (823)
Q Consensus 178 -~~~~It~l~fs~dg~~~~l~~~t~ 201 (823)
...--++|+|+++++ .||++..
T Consensus 201 ~~~~vlNGIA~d~~~~--~lfVTGK 223 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHD--RLFVTGK 223 (243)
T ss_dssp TTSSCEEEEEEETTTT--EEEEEET
T ss_pred CcCCceEEEEEcCCCC--EEEEECC
Confidence 112346899999873 5777654
No 327
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=91.89 E-value=9.6 Score=37.50 Aligned_cols=198 Identities=10% Similarity=-0.034 Sum_probs=106.5
Q ss_pred hccHHHHHHHHHhc-C---CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCc--ChH---HHHHHhhchhhHHHHH
Q 037368 343 KNLYTVAINLVQSQ-Q---ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHL--EPS---YVIQKFLDAQRIYNLT 413 (823)
Q Consensus 343 ~~~f~~Al~la~~~-~---~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~--eps---~vI~kFl~~~~~~~L~ 413 (823)
.++|+.|++..+.. . .++.....++...|..++..|+|++|...|-+.+... .+. ....-+...++.+.=.
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~ 97 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 97 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHH
Confidence 46788888877652 1 2344567778888999999999999999998875322 111 1222333445555444
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHhcCChhh----HHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHH----
Q 037368 414 NYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK----LNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKK---- 485 (823)
Q Consensus 414 ~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~----l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~---- 485 (823)
.++.........+..-...+-.+|.++++.++ +.+-++..+ . .........++...|.+++|+.+..+
T Consensus 98 ~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~---~-~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 98 EAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP---N-DPFRSLWLYLAEQKLDEKQAKEVLKQHFEK 173 (275)
T ss_dssp HHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---T-CHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC---C-ChHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 55555444333344444456668888877543 334443332 1 11122233344455677777766632
Q ss_pred hCChH---HHHHHHHHhhcCHHHHHHHHhcC-ChH-----HHHHHHHHHHHHHHh-cCCHHHHHHHHHHh
Q 037368 486 AGKHE---LYLKILLEDLGRYDEALQYISSL-DPS-----QAGVTVKEYGKILIE-HKPMETIDILLRLC 545 (823)
Q Consensus 486 ~~~~~---~~l~il~~~~~~~~~al~yl~~l-~~~-----~~~~~i~k~~~~Ll~-~~p~~~~~ll~~~~ 545 (823)
..... ....+++.. +++++|++++.+. ... .........|..... ..++++...+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 242 (275)
T 1xnf_A 174 SDKEQWGWNIVEFYLGN-ISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAV 242 (275)
T ss_dssp SCCCSTHHHHHHHHTTS-SCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHh-cCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 11111 112333333 6788888888762 211 112344444544443 35667777766553
No 328
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=91.77 E-value=1.2 Score=46.68 Aligned_cols=204 Identities=13% Similarity=0.016 Sum_probs=110.0
Q ss_pred HHHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChH------HHHHHhhch
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPS------YVIQKFLDA 406 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps------~vI~kFl~~ 406 (823)
-..-..++..++|+.|+...+.. ...+. ....+...|.-++..|+|++|...|-+.+.. .|. ....-+...
T Consensus 68 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 68 FEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLEL-KPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHc
Confidence 45667888999999999988762 12211 2345667788889999999999999887532 221 112233344
Q ss_pred hhHHHHHHHHHHHHHcCCCChhHHH----------------HHHHHHHhcCCh----hhHHHhhcCCCCCCcccCCH---
Q 037368 407 QRIYNLTNYLEKLHEKGFASKDHTT----------------LLLNCYTKLKDV----EKLNMFIKGEDGVGEHKFDV--- 463 (823)
Q Consensus 407 ~~~~~L~~YL~~l~~~~~~~~~~~~----------------lLl~~y~kl~~~----~~l~~fi~~~~~~~~~~~d~--- 463 (823)
++...=..++.........+..... .+-.++ +.++. ..+.+.++..+ . ..+.
T Consensus 146 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p---~-~~~~~~~ 220 (368)
T 1fch_A 146 SLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRLDP---T-SIDPDVQ 220 (368)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHHHHHHHHHHHHHHHHST---T-SCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHhCc---C-cccHHHH
Confidence 4554444455543332221111110 122223 44432 23444444443 1 0021
Q ss_pred HHHHHHHHhcCCHHHHHHHHHH----hCChHHH---HHHHHHhhcCHHHHHHHHhcC---ChHHHHHHHHHHHHHHH-hc
Q 037368 464 ETAIRVCRAANYHEHAMYVAKK----AGKHELY---LKILLEDLGRYDEALQYISSL---DPSQAGVTVKEYGKILI-EH 532 (823)
Q Consensus 464 ~~ai~vl~~~g~~~~a~~la~~----~~~~~~~---l~il~~~~~~~~~al~yl~~l---~~~~~~~~i~k~~~~Ll-~~ 532 (823)
...-.++...|.+++|+...++ ...+..+ +.......+++++|+.++.+. .+.. .......|..++ ..
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~g 299 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGY-IRSRYNLGISCINLG 299 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHCC
Confidence 2234456678888888877664 2333222 222233459999999999873 2222 234444554444 34
Q ss_pred CCHHHHHHHHHHh
Q 037368 533 KPMETIDILLRLC 545 (823)
Q Consensus 533 ~p~~~~~ll~~~~ 545 (823)
..+++.+.+.+..
T Consensus 300 ~~~~A~~~~~~al 312 (368)
T 1fch_A 300 AHREAVEHFLEAL 312 (368)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6677777776643
No 329
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=91.63 E-value=2.1 Score=39.26 Aligned_cols=55 Identities=18% Similarity=0.113 Sum_probs=40.5
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|-+.+.
T Consensus 15 ~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 70 (186)
T 3as5_A 15 GISHAKAGRYSQAVMLLEQVYDADAF-DVDVALHLGIAYVKTGAVDRGTELLERSLA 70 (186)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcc-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45566789999999988763 22111 245667778888999999999999887643
No 330
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=91.50 E-value=1.2 Score=43.51 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=40.3
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+.+.++|+.|+...+.. ..+|. -...+...|.-++..|++++|+..|-+.+
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al 66 (217)
T 2pl2_A 12 GVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLV 66 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35677889999999988762 22221 23556677888899999999999998875
No 331
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=91.48 E-value=16 Score=38.54 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=16.8
Q ss_pred hhHHHHHHHhccHHHHHHHHHh
Q 037368 699 EGLLYLYEKLKLYKEVIACYTQ 720 (823)
Q Consensus 699 ~~~v~L~~k~g~~~~al~~~~~ 720 (823)
..+..+|.++|.+++|+.++-.
T Consensus 340 ~~la~~y~~~g~~~~A~~~~~~ 361 (378)
T 3q15_A 340 RSAAAVFESSCHFEQAAAFYRK 361 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHH
Confidence 4567788888888888887653
No 332
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=90.94 E-value=1.3 Score=41.36 Aligned_cols=53 Identities=21% Similarity=0.163 Sum_probs=38.9
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+.++|+|+.|++..++. .++|. -...+...|.-++..|+|++|...+.+.+
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 66 (184)
T 3vtx_A 13 DKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKLGKTYMDIGLPNDAIESLKKFV 66 (184)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4566789999999988762 12222 23456667888899999999999987764
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.80 E-value=18 Score=38.06 Aligned_cols=47 Identities=6% Similarity=0.102 Sum_probs=27.6
Q ss_pred ccEEEEEeCCCCEEEEeccc-----cceeEE-EeecCcEEEEEc--CCeEEEEee
Q 037368 284 KNIFNVYDLKNRLIAHSLVV-----KEVSHM-LCEWGNIILVMT--DKSVLCIGE 330 (823)
Q Consensus 284 ~~~I~I~D~~~~~i~~~~~i-----~~v~~v-~~~~~~~~vvs~--~~~v~~l~~ 330 (823)
.+.|...++.+........+ ..+..+ +.++|.+|+++. ++.|+|+.+
T Consensus 298 ~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 298 DKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp TTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred CCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 45777777665432211111 124444 567788999853 578999874
No 334
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=90.42 E-value=0.79 Score=42.61 Aligned_cols=62 Identities=15% Similarity=0.212 Sum_probs=51.4
Q ss_pred eecChHHHHHHHHHhccHHHHHHHHHh-------c--CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 329 GEKDMESKLDMLFKKNLYTVAINLVQS-------Q--QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 329 ~~~~~~~~i~~L~~~~~f~~Al~la~~-------~--~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
....+-++++-|+++++|+-|.-++.- . -+++...-++.-.+||-+|.+|+|..|...|.+.
T Consensus 19 ~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qA 89 (167)
T 3ffl_A 19 SHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMA 89 (167)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 445678999999999999999877753 1 1357778889999999999999999999999886
No 335
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=90.30 E-value=2.7 Score=43.21 Aligned_cols=166 Identities=16% Similarity=0.116 Sum_probs=81.8
Q ss_pred HHHHHHhccHHHHHHHHHh---cCC-CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcCh-HHHHHHhhchhhHHH
Q 037368 337 LDMLFKKNLYTVAINLVQS---QQA-DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP-SYVIQKFLDAQRIYN 411 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~---~~~-~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~ep-s~vI~kFl~~~~~~~ 411 (823)
...+...++++.|++..+. .+. |.. ..++...|.-+...|++++|...|-+ .+..+. .....-+...++.+.
T Consensus 72 a~~~~~~~~~~~A~~~l~~ll~~~~~P~~--~~~~~~la~~~~~~g~~~~Al~~l~~-~~~~~~~~~l~~~~~~~g~~~~ 148 (291)
T 3mkr_A 72 AEYLASHSRRDAIVAELDREMSRSVDVTN--TTFLLMAASIYFYDQNPDAALRTLHQ-GDSLECMAMTVQILLKLDRLDL 148 (291)
T ss_dssp HHHHHCSTTHHHHHHHHHHHHHSCCCCSC--HHHHHHHHHHHHHTTCHHHHHHHHTT-CCSHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCCcHHHHHHHHHHHHhcccCCCC--HHHHHHHHHHHHHCCCHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHH
Confidence 4556667788888887664 121 221 23455567777888888888888776 112221 112233444555555
Q ss_pred HHHHHHHHHHcCCCChhHHHH---HHHHHHhcCCh----hhHHHhhcCCCCCCcccCCHH---HHHHHHHhcCCHHHHHH
Q 037368 412 LTNYLEKLHEKGFASKDHTTL---LLNCYTKLKDV----EKLNMFIKGEDGVGEHKFDVE---TAIRVCRAANYHEHAMY 481 (823)
Q Consensus 412 L~~YL~~l~~~~~~~~~~~~l---Ll~~y~kl~~~----~~l~~fi~~~~~~~~~~~d~~---~ai~vl~~~g~~~~a~~ 481 (823)
=..+|........... ...+ +++++...++. ..+++.++..+ -+.. ..-.++.+.|++++|..
T Consensus 149 A~~~l~~~~~~~p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p------~~~~~~~~la~~~~~~g~~~eA~~ 221 (291)
T 3mkr_A 149 ARKELKKMQDQDEDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCS------PTLLLLNGQAACHMAQGRWEAAEG 221 (291)
T ss_dssp HHHHHHHHHHHCTTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSC------CCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhhCcCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHH
Confidence 4555555443321111 1111 12233222322 23455555443 1221 11224567788887777
Q ss_pred HHHH----hCChHHHH---HHHHHhhcCHHH-HHHHHhc
Q 037368 482 VAKK----AGKHELYL---KILLEDLGRYDE-ALQYISS 512 (823)
Q Consensus 482 la~~----~~~~~~~l---~il~~~~~~~~~-al~yl~~ 512 (823)
..++ .+++..++ -......|++.+ |.+|+.+
T Consensus 222 ~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~ 260 (291)
T 3mkr_A 222 VLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQ 260 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 6664 34444332 222223477765 5577755
No 336
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=90.23 E-value=2.6 Score=41.42 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=41.1
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|-+.+.
T Consensus 78 a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 78 AVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 45667889999999987752 11111 235667778889999999999999998865
No 337
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.14 E-value=24 Score=38.37 Aligned_cols=149 Identities=6% Similarity=-0.006 Sum_probs=78.7
Q ss_pred ceeEEEEecC---CCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCC
Q 037368 66 SVLFLQQLKQ---RNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEA 142 (823)
Q Consensus 66 ~V~~i~~~~~---~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~ 142 (823)
.-..|+++|+ |.+.++-.. +. |+.+|+... .+.++. . +...+..+++++++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~---------I~~id~~~g-----------~v~~~~--~---~~~~P~giavd~dG 193 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DA---------FRHVDFVNQ-----------YVDIKT--T---NIGQCADVNFTLNG 193 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SC---------EEEEETTTT-----------EEEEEC--C---CCSCEEEEEECTTC
T ss_pred CCceEEEccccCCCEEEEEeCC-CC---------EEEEECCCC-----------EEEEee--c---CCCCccEEEECCCC
Confidence 3567888874 454444322 44 888888532 122221 1 11237999999999
Q ss_pred CCcceEEEEEeC---Ce-EEEEEcccccccccc-eeEEecCCCCcceEEEee-cCCeEEEEEEcC--CeEEEEEecCCCC
Q 037368 143 PPILLIAIGLDN---GC-IYCIKGDIARERITR-FKLQVDNQCSVMGLGFRV-DGQALQLFAVTP--NSVILFSLQNQPP 214 (823)
Q Consensus 143 ~~~~~ia~G~~d---G~-V~l~~~~~~~~~~~k-~~~~~~~~~~It~l~fs~-dg~~~~l~~~t~--~~V~~~d~~~~~~ 214 (823)
+. +++-..+ .. +..+... .+.. ...+.. -..-.++++.+ +| .|+++.. +.|+.++..+...
T Consensus 194 ~l---yVad~~~~~~~~gv~~~~~~----~~~~~~~~~~~-~~~P~giavd~~~G---~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 194 DM---VVVDDQSSDTNTGIYLFTRA----SGFTERLSLCN-ARGAKTCAVHPQNG---KIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CE---EEEECCSCTTSEEEEEECGG----GTTCCEEEEEE-CSSBCCCEECTTTC---CEEECBTTCSEEEEECTTTCCE
T ss_pred CE---EEEcCCCCcccceEEEEECC----CCeeccccccc-cCCCCEEEEeCCCC---eEEEEECCCCEEEEEECCCCeE
Confidence 87 7765432 12 3333221 1111 112222 23356788888 55 4666653 4588888753221
Q ss_pred cceEEccC-CCccceecccCCCe-EEEee--CCeEEEEecC
Q 037368 215 KRQFLDNI-GCSTNSVAMSDRLE-LIIGR--PEAVYFYEVD 251 (823)
Q Consensus 215 ~~~~l~~~-~~~~~~~~~s~~~~-liv~~--~~~I~i~~~~ 251 (823)
....+... ......++++|+|. +.++- ...|+.++.+
T Consensus 263 ~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 263 TEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 12222211 11223589999886 55543 3588887765
No 338
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=89.94 E-value=2.5 Score=41.94 Aligned_cols=170 Identities=14% Similarity=0.005 Sum_probs=87.5
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCc--ChH---HHHHHhhchhhHH
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHL--EPS---YVIQKFLDAQRIY 410 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~--eps---~vI~kFl~~~~~~ 410 (823)
-..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|-+.+... .+. ....-+...++.+
T Consensus 50 ~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~ 128 (275)
T 1xnf_A 50 GVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDK 128 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHH
Confidence 45556789999999988762 11111 23466677888999999999999998875421 111 1222334455666
Q ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh----HHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHh
Q 037368 411 NLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK----LNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKA 486 (823)
Q Consensus 411 ~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~----l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~ 486 (823)
.=..++.........+.. ..+++.++.+.++.+. +.+.+...+ . ....-....++...+..++|+..+.+.
T Consensus 129 ~A~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~a~~~~~~~ 203 (275)
T 1xnf_A 129 LAQDDLLAFYQDDPNDPF-RSLWLYLAEQKLDEKQAKEVLKQHFEKSD---K-EQWGWNIVEFYLGNISEQTLMERLKAD 203 (275)
T ss_dssp HHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHCHHHHHHHHHHHHHHSC---C-CSTHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCChH-HHHHHHHHHHhcCHHHHHHHHHHHHhcCC---c-chHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 555566554443333332 2223333344444332 223333322 1 111122333333444455555555431
Q ss_pred -CChH-------H---HHHHHHHhhcCHHHHHHHHhc
Q 037368 487 -GKHE-------L---YLKILLEDLGRYDEALQYISS 512 (823)
Q Consensus 487 -~~~~-------~---~l~il~~~~~~~~~al~yl~~ 512 (823)
.... . .+.......+++++|+.++.+
T Consensus 204 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 240 (275)
T 1xnf_A 204 ATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKL 240 (275)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1111 1 122223344899999998876
No 339
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.86 E-value=32 Score=39.43 Aligned_cols=182 Identities=11% Similarity=-0.056 Sum_probs=104.2
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec-CCCCcceEEEeecCCeEEEEEEcC--CeEEEEEe
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD-NQCSVMGLGFRVDGQALQLFAVTP--NSVILFSL 209 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~-~~~~It~l~fs~dg~~~~l~~~t~--~~V~~~d~ 209 (823)
+..++|+++... -+.+-..++.|..++.+ +.....+.. +-....+|++.+.+. .||++.. +.|.+.++
T Consensus 39 ~~~l~~d~~~~~--lywtD~~~~~I~r~~~~-----g~~~~~v~~~g~~~P~GlAvD~~~~--~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 39 ASALDFDVTDNR--IYWTDISLKTISRAFMN-----GSALEHVVEFGLDYPEGMAVDWLGK--NLYWADTGTNRIEVSKL 109 (628)
T ss_dssp EEEEEEETTTTE--EEEEETTTTEEEEEETT-----SCSCEEEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEET
T ss_pred eEEEEEECCCCE--EEEEECCCCeEEEEECC-----CCCcEEEEeCCCCCcceEEEEeCCC--EEEEEECCCCEEEEEec
Confidence 789999986544 04444557788776543 222333332 334578999988763 5787754 46999998
Q ss_pred cCCCCcceEE-ccCCCccceecccC-CCeEEEe-eC--CeEEEEecCCCCccccccC--CeEEEEee--CcEEEEEEecC
Q 037368 210 QNQPPKRQFL-DNIGCSTNSVAMSD-RLELIIG-RP--EAVYFYEVDGRGPCWAFEG--EKKLLGWF--RGYLLCVIADQ 280 (823)
Q Consensus 210 ~~~~~~~~~l-~~~~~~~~~~~~s~-~~~liv~-~~--~~I~i~~~~g~~~~~~~~g--~~~~i~~~--~~ylv~~s~d~ 280 (823)
+++. ..++ ......+..+++.| .|.+.++ ++ ..|...+++|......+++ .+..++.+ +..|..+-.
T Consensus 110 dG~~--~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~-- 185 (628)
T 4a0p_A 110 DGQH--RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDL-- 185 (628)
T ss_dssp TSTT--CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEET--
T ss_pred CCCc--EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEEC--
Confidence 7643 2333 23334567788887 6776654 33 4788888887654322222 35666665 455554432
Q ss_pred CCCccEEEEEeCCCCE-EEEeccccceeEEEeecCcEEEEEc-CCeEEEEe
Q 037368 281 RNSKNIFNVYDLKNRL-IAHSLVVKEVSHMLCEWGNIILVMT-DKSVLCIG 329 (823)
Q Consensus 281 ~~~~~~I~I~D~~~~~-i~~~~~i~~v~~v~~~~~~~~vvs~-~~~v~~l~ 329 (823)
..+.|..+|+.+.. ......+.....+-...+.+|+... .+.|+++.
T Consensus 186 --~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 186 --DTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp --TTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --CCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEE
Confidence 35689999887532 1222233332233222356666654 34555554
No 340
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=89.63 E-value=3.8 Score=37.43 Aligned_cols=80 Identities=13% Similarity=0.046 Sum_probs=43.3
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcC--hH---HHHHHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLE--PS---YVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCY 437 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~e--ps---~vI~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y 437 (823)
....+...|..++..|+|++|...|-+.+.... +. ....-+...++.+.-..++.........+......+..+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTY 86 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456677778889999999999999988754321 11 1112223344444445555554433322332223333444
Q ss_pred HhcCC
Q 037368 438 TKLKD 442 (823)
Q Consensus 438 ~kl~~ 442 (823)
.+.++
T Consensus 87 ~~~~~ 91 (186)
T 3as5_A 87 VQVQK 91 (186)
T ss_dssp HHHTC
T ss_pred HHhcC
Confidence 44444
No 341
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=89.14 E-value=4.8 Score=42.69 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=38.8
Q ss_pred HHHHhccHHHHHHHHHh-------cCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 339 MLFKKNLYTVAINLVQS-------QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~-------~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.+...++|+.|+...+. .+.........+...|..++..|+|++|...|-+++.
T Consensus 150 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 210 (378)
T 3q15_A 150 AYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALE 210 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34566787777766554 2211345667777889999999999999999988754
No 342
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.02 E-value=8.9 Score=40.53 Aligned_cols=54 Identities=7% Similarity=0.197 Sum_probs=37.7
Q ss_pred HHHHhccHHHHHHHHHh-------cCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 339 MLFKKNLYTVAINLVQS-------QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~-------~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.+...++|+.|++..+. .+-.......++...|.-+...|+|++|...|-+++.
T Consensus 152 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 152 SYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34456777777665554 2211444566777888999999999999999988753
No 343
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=88.93 E-value=38 Score=38.96 Aligned_cols=109 Identities=12% Similarity=-0.045 Sum_probs=61.6
Q ss_pred eEEEeeC-CC-EEEEEecCC-----------eEEEEc-CCCe--eeEeEee-cccceeEEEEecCCCEEEEEecCCCCcc
Q 037368 28 ITCCSSG-RG-KVVIGCDDG-----------AVSLLD-RGLK--FNFGFQA-HSSSVLFLQQLKQRNFLVTVGEDEQVSA 90 (823)
Q Consensus 28 is~~~~~-~~-~l~~gs~dG-----------~i~~~d-~~~~--~~~~~~~-H~~~V~~i~~~~~~~~l~s~s~D~~~~~ 90 (823)
..++... ++ .+++|+.++ .+.+|| .+++ .+..... +......+++..+|.+++.+|.++.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~--- 265 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK--- 265 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT---
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC---
Confidence 3444443 44 557776432 588999 3332 2222322 3333445677789999999996653
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCc-eEEEEEecCCCCcceEEEEE-eC-----CeEEEEEc
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAK-ITSFLVLEEAPPILLIAIGL-DN-----GCIYCIKG 162 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-v~~va~~~d~~~~~~ia~G~-~d-----G~V~l~~~ 162 (823)
. +.+||..+.. -.. +. ..|..+ -.++++.++++. +++|+ .+ ..+.+|+.
T Consensus 266 -~----v~~yd~~t~~-----------W~~--~~--~~~~~R~~~s~~~~~dg~i---yv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 266 -K----TSLYDSSSDS-----------WIP--GP--DMQVARGYQSSATMSDGRV---FTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp -C----EEEEEGGGTE-----------EEE--CC--CCSSCCSSCEEEECTTSCE---EEECCCCCSSSCCCCEEEEET
T ss_pred -c----eEEecCcCCc-----------eeE--CC--CCCccccccceEEecCCeE---EEEeCcccCCcccccceEeCC
Confidence 1 9999987421 111 11 111111 245566678888 88887 34 45778875
No 344
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.70 E-value=1.5 Score=48.81 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=13.5
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.+...|.-++..|+|++|...|-+.+
T Consensus 139 a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 139 AWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34444555555555555555555554
No 345
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.64 E-value=14 Score=41.89 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=37.4
Q ss_pred CCEEEEEecC----------------CeEEEEc-CCCeeeEeEee--cc--------cceeEEEEecCCC---EEEEEec
Q 037368 35 RGKVVIGCDD----------------GAVSLLD-RGLKFNFGFQA--HS--------SSVLFLQQLKQRN---FLVTVGE 84 (823)
Q Consensus 35 ~~~l~~gs~d----------------G~i~~~d-~~~~~~~~~~~--H~--------~~V~~i~~~~~~~---~l~s~s~ 84 (823)
.+.+++|+.+ +.|.-+| .+|+.+..++. |. .++. +....+|+ .++.++.
T Consensus 246 ~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~ 324 (571)
T 2ad6_A 246 LNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDR 324 (571)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECT
T ss_pred CCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCC
Confidence 4677777643 3699999 78888777763 21 2221 22223663 5667777
Q ss_pred CCCCcccccceeEEEEeCCC
Q 037368 85 DEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 85 D~~~~~~~~~~~vkvWdl~~ 104 (823)
+|. +.+.|...
T Consensus 325 ~G~---------l~~lD~~t 335 (571)
T 2ad6_A 325 NGI---------LYTLNREN 335 (571)
T ss_dssp TSE---------EEEEETTT
T ss_pred CcE---------EEEEECCC
Confidence 776 87888764
No 346
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=88.51 E-value=16 Score=42.25 Aligned_cols=63 Identities=11% Similarity=0.179 Sum_probs=43.5
Q ss_pred CCCEEEEEecCCe-------------------EEEEc-CCCeeeEeEee--cc-------cceeEEEEecCCC---EEEE
Q 037368 34 GRGKVVIGCDDGA-------------------VSLLD-RGLKFNFGFQA--HS-------SSVLFLQQLKQRN---FLVT 81 (823)
Q Consensus 34 ~~~~l~~gs~dG~-------------------i~~~d-~~~~~~~~~~~--H~-------~~V~~i~~~~~~~---~l~s 81 (823)
..+.+++|+.+|. |.-+| .+|+.+..++. |. .+.....+..+|+ .++.
T Consensus 240 ~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~ 319 (668)
T 1kv9_A 240 ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQ 319 (668)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEE
Confidence 3578889988774 99999 78998877764 32 2333333333665 6888
Q ss_pred EecCCCCcccccceeEEEEeCCCC
Q 037368 82 VGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 82 ~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
++.+|. +.++|..+.
T Consensus 320 ~~~~G~---------l~~lD~~tG 334 (668)
T 1kv9_A 320 APKNGF---------FYVLDRTNG 334 (668)
T ss_dssp CCTTSE---------EEEEETTTC
T ss_pred ECCCCE---------EEEEECCCC
Confidence 888886 888887743
No 347
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=88.07 E-value=2.6 Score=42.65 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=42.1
Q ss_pred HHHHHHhccHHHHHHHHHhcC-C-------CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQQ-A-------DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~~-~-------~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|+.+.+..- + +......++...|..++..|+|++|...|-+.+.
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 455667899999988776521 0 2334567778889999999999999999988754
No 348
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.50 E-value=2.5 Score=49.64 Aligned_cols=181 Identities=11% Similarity=-0.036 Sum_probs=88.9
Q ss_pred CCEEEEEe-cCCeEEEEcCCC-----eeeEeEeecccceeEEEEec-CCCEEEEEecCCCCcccccceeEEEEeCCCCCC
Q 037368 35 RGKVVIGC-DDGAVSLLDRGL-----KFNFGFQAHSSSVLFLQQLK-QRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEP 107 (823)
Q Consensus 35 ~~~l~~gs-~dG~i~~~d~~~-----~~~~~~~~H~~~V~~i~~~~-~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~ 107 (823)
.+.|+..+ ..+.|+.++..+ .....+..--.....|++++ .+++.++-...++ |.+.++...
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~---------I~v~d~dg~-- 485 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT---------VSVADTKGV-- 485 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC---------EEEEBSSSC--
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe---------EEEEecCCC--
Confidence 35555443 446677776332 11111111112355678874 4555565445555 888887632
Q ss_pred CCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE-eC-CeEEEEEcccccccccceeEEe-cCCCCcce
Q 037368 108 EGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL-DN-GCIYCIKGDIARERITRFKLQV-DNQCSVMG 184 (823)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~-~d-G~V~l~~~~~~~~~~~k~~~~~-~~~~~It~ 184 (823)
...++ +.... ..+..+|++|++.. |.... .. +.|..++.+ +...+++. ..-..-++
T Consensus 486 ---------~~~~l-~~~~~---~~P~giavDp~~g~---ly~td~~~~~~I~~~~~d-----G~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 486 ---------KRKTL-FREQG---SKPRAIVVDPVHGF---MYWTDWGTPAKIKKGGLN-----GVDIYSLVTENIQWPNG 544 (699)
T ss_dssp ---------CEEEE-CCCSS---CCCCCEECCSSSSC---CEECCCSSSCCEEBCCSS-----SCCCCEESCSSCSSCCC
T ss_pred ---------ceEEE-EeCCC---CCcceEEEccCCCc---EEEcccCCCCeEEEEeCC-----CCCeeEEEeCCCCCccE
Confidence 12222 11101 12578999996554 44332 22 566655432 22222232 22234568
Q ss_pred EEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccC--CCccceecccCCCeEEEeeC-CeEEEEec
Q 037368 185 LGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNI--GCSTNSVAMSDRLELIIGRP-EAVYFYEV 250 (823)
Q Consensus 185 l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~--~~~~~~~~~s~~~~liv~~~-~~I~i~~~ 250 (823)
|+|++++ ..||++.. +.|..+++.+.. ...++... ...+..+++..++-+++.+. +.|..++.
T Consensus 545 lavd~~~--~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 545 ITLDLLS--GRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp EEECTTT--CCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred EEEeccC--CEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 9999876 35777753 468899887532 22222211 11223344444433444444 47777765
No 349
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.43 E-value=31 Score=36.25 Aligned_cols=147 Identities=13% Similarity=0.135 Sum_probs=73.1
Q ss_pred cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC---
Q 037368 65 SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE--- 141 (823)
Q Consensus 65 ~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d--- 141 (823)
..-..|++.|+|.++++-. ++. |++++.+ +. ..+..+.+... .+.....|+++|+
T Consensus 29 ~~P~~ia~~pdG~l~V~e~-~g~---------I~~~d~~---------G~-~~~~~~~v~~~--g~~g~~gia~~pdf~~ 86 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTER-PGR---------LVLISPS---------GK-KLVASFDVANV--GEAGLLGLALHPEFPK 86 (354)
T ss_dssp SCEEEEEEEETTEEEEEET-TTE---------EEEECSS---------CE-EEEEECCCCCS--TTCSEEEEEECTTTTT
T ss_pred CCCeEEEEcCCCeEEEEeC-CCE---------EEEEeCC---------Cc-eEeeccceeec--CCCceeeEEeCCCCCc
Confidence 3567899999998777654 365 8777632 11 12222111110 0123799999998
Q ss_pred CCCcceEEEEEe----C----CeEEEEEcccccccccceeEEec---C--CCCcceEEEeecCCeEEEEEEcC-------
Q 037368 142 APPILLIAIGLD----N----GCIYCIKGDIARERITRFKLQVD---N--QCSVMGLGFRVDGQALQLFAVTP------- 201 (823)
Q Consensus 142 ~~~~~~ia~G~~----d----G~V~l~~~~~~~~~~~k~~~~~~---~--~~~It~l~fs~dg~~~~l~~~t~------- 201 (823)
... +-+... + +.|..|+.+-....-...+++.. . ...-.+|.|.+||. |+++..
T Consensus 87 ~g~---lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~---Lyvt~G~~~~~~~ 160 (354)
T 3a9g_A 87 KSW---VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM---LYITTGDAADPRL 160 (354)
T ss_dssp SCE---EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC---EEEECCCTTCGGG
T ss_pred CCE---EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc---EEEEECCCCCCcc
Confidence 333 443332 2 45555543200000001222221 1 22356899999983 666532
Q ss_pred --------CeEEEEEecCCCC------cceEEc-cCCCccceecccC-CCeEEEe
Q 037368 202 --------NSVILFSLQNQPP------KRQFLD-NIGCSTNSVAMSD-RLELIIG 240 (823)
Q Consensus 202 --------~~V~~~d~~~~~~------~~~~l~-~~~~~~~~~~~s~-~~~liv~ 240 (823)
++|.-++.+++.. ...++. ++. .+.-++|+| +|++.++
T Consensus 161 ~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 161 AQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVAT 214 (354)
T ss_dssp GTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEE
T ss_pred ccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEE
Confidence 2465555544310 012221 221 245678888 7887765
No 350
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=87.29 E-value=21 Score=34.28 Aligned_cols=56 Identities=13% Similarity=0.034 Sum_probs=40.2
Q ss_pred HHHHHHHhccHHHHHHHHHhc--CCCH-HHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ--QADA-AATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~--~~~~-~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..+++.++|+.|+..-+.. ..|. ..........|.-++..|+|++|+..|-+.+
T Consensus 10 ~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 10 TAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 345678899999999877652 1121 1123556667888999999999999988753
No 351
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.13 E-value=4.4 Score=40.13 Aligned_cols=110 Identities=12% Similarity=0.095 Sum_probs=61.5
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcC-hHH-------HHHHhhc
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLE-PSY-------VIQKFLD 405 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~e-ps~-------vI~kFl~ 405 (823)
..-..++..++|+.|++..+.. ...+. -..++...|..++..|+|++|+..|-+.+..-+ |.. .-.-+..
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~ 86 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYN-SPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMK 86 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCC-CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Confidence 4456777889999999988762 11111 122455567788889999999999988765221 111 1122333
Q ss_pred hhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh
Q 037368 406 AQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK 445 (823)
Q Consensus 406 ~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~ 445 (823)
.++.+.=+.++....+....+......+-.+|.++++.++
T Consensus 87 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 126 (272)
T 3u4t_A 87 KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPL 126 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHH
T ss_pred cccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHH
Confidence 3444444444444333333333334445556666666443
No 352
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=87.09 E-value=41 Score=37.24 Aligned_cols=157 Identities=15% Similarity=0.138 Sum_probs=83.3
Q ss_pred eeEEEEecC-CCEEEEEecC-CCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEE------
Q 037368 67 VLFLQQLKQ-RNFLVTVGED-EQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLV------ 138 (823)
Q Consensus 67 V~~i~~~~~-~~~l~s~s~D-~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~------ 138 (823)
-..|+|+|. +..|..+..+ +. |++.|+... .+.++-... ..+-..+..++|
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~---------i~~ID~~~~-----------~v~~l~~~~-~~~~~~p~~ia~~~~~~~ 199 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKA---------IQLIDLKNR-----------MLSSPLNIN-TIPTNRIRSIAFNKKIEG 199 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEE---------EEEEETTTT-----------EEEEEECCT-TSSCSBEEEEEECCCBTT
T ss_pred CCEEEEccCCCCEEEEEECCCCe---------EEEEECCCC-----------EEEEEEccC-ccccCCCcEEEEeecccc
Confidence 457899983 4445444443 32 888887742 233332111 111124799999
Q ss_pred -ecCCCCcceEEEEEeCC-e------EEEEEcccccccccc--e--eEEecCCCCcceEEEeecCCeEEEEEEc--CCeE
Q 037368 139 -LEEAPPILLIAIGLDNG-C------IYCIKGDIARERITR--F--KLQVDNQCSVMGLGFRVDGQALQLFAVT--PNSV 204 (823)
Q Consensus 139 -~~d~~~~~~ia~G~~dG-~------V~l~~~~~~~~~~~k--~--~~~~~~~~~It~l~fs~dg~~~~l~~~t--~~~V 204 (823)
++++.. +.+....+ . |.+++.. .+.... . +.+..... ..++++.+++. .|+++. .+.|
T Consensus 200 ~d~~G~~---lyvad~~~~~~~~~~~V~~i~r~--~~G~~~~~~~~~~v~~~~~-p~giavdp~~g--~LYvtd~~~g~V 271 (496)
T 3kya_A 200 YADEAEY---MIVAIDYDGKGDESPSVYIIKRN--ADGTFDDRSDIQLIAAYKQ-CNGATIHPING--ELYFNSYEKGQV 271 (496)
T ss_dssp TBCTTCE---EEEEECCCTTGGGEEEEEEEECC--TTSCCSTTSCEEEEEEESC-CCCEEECTTTC--CEEEEETTTTEE
T ss_pred cCCCCCE---EEEEeCCCCCcccCceEEEEecC--CCCceeecccceeeccCCC-ceEEEEcCCCC--eEEEEECCCCEE
Confidence 999985 55544333 2 5555321 000111 0 22323333 35888888552 466664 3459
Q ss_pred EEEEec-------CCCC-----c------ceEEc-cCCCccceecccCCCe-EEEe--eCCeEEEEecCC
Q 037368 205 ILFSLQ-------NQPP-----K------RQFLD-NIGCSTNSVAMSDRLE-LIIG--RPEAVYFYEVDG 252 (823)
Q Consensus 205 ~~~d~~-------~~~~-----~------~~~l~-~~~~~~~~~~~s~~~~-liv~--~~~~I~i~~~~g 252 (823)
+.+++. ++.. + ..++. ..+..+..++|+|+|. +.++ ....|+.++.++
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 999986 3321 0 12222 2234456789999997 4554 335788866554
No 353
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=86.92 E-value=27 Score=35.16 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=42.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHhc----CCCHHHH--HHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQ----QADAAAT--AEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~----~~~~~~~--~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.+.+..++..++|+.|+++.+.. ...+... ...+...|..++.+++|++|+..|-+.+.
T Consensus 79 ~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~ 143 (293)
T 3u3w_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN 143 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 34577888999999999988762 1123222 33444568888899999999999988754
No 354
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=86.29 E-value=45 Score=36.91 Aligned_cols=166 Identities=7% Similarity=0.047 Sum_probs=85.8
Q ss_pred eEEEeeC---CCEEEEEec-CCeEEEEcCCCeeeEeEeec-c---cceeEEEE-------ecCCCEEEEEecCCCC-ccc
Q 037368 28 ITCCSSG---RGKVVIGCD-DGAVSLLDRGLKFNFGFQAH-S---SSVLFLQQ-------LKQRNFLVTVGEDEQV-SAQ 91 (823)
Q Consensus 28 is~~~~~---~~~l~~gs~-dG~i~~~d~~~~~~~~~~~H-~---~~V~~i~~-------~~~~~~l~s~s~D~~~-~~~ 91 (823)
-..+++. .+.|+++.. .+.|++.|...+.+.++-.- + .+...|+| +++|+.|..+...+.. ...
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 3445554 356766654 36788899544434344322 1 25889999 9999966555444310 000
Q ss_pred ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecC-CCCcceEEEEEeCCeEEEEEccc------
Q 037368 92 QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEE-APPILLIAIGLDNGCIYCIKGDI------ 164 (823)
Q Consensus 92 ~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d-~~~~~~ia~G~~dG~V~l~~~~~------ 164 (823)
..|-+.+... + +.-..++. .+++..+ .. +..++++|+ +.. +++-..+|.|..++.+-
T Consensus 221 ---~~V~~i~r~~-~--G~~~~~~~-~~~v~~~--~~----p~giavdp~~g~L---Yvtd~~~g~V~r~d~~~~~~~~~ 284 (496)
T 3kya_A 221 ---PSVYIIKRNA-D--GTFDDRSD-IQLIAAY--KQ----CNGATIHPINGEL---YFNSYEKGQVFRLDLVDYFKTIK 284 (496)
T ss_dssp ---EEEEEEECCT-T--SCCSTTSC-EEEEEEE--SC----CCCEEECTTTCCE---EEEETTTTEEEEECHHHHHHHHH
T ss_pred ---ceEEEEecCC-C--Cceeeccc-ceeeccC--CC----ceEEEEcCCCCeE---EEEECCCCEEEEEeccccccccc
Confidence 0033344221 0 00000010 1233322 23 578899994 455 56666788888887530
Q ss_pred cccc-----cc----ceeEEe-cCCCCcceEEEeecCCeEEEEEEc--CCeEEEEEecC
Q 037368 165 ARER-----IT----RFKLQV-DNQCSVMGLGFRVDGQALQLFAVT--PNSVILFSLQN 211 (823)
Q Consensus 165 ~~~~-----~~----k~~~~~-~~~~~It~l~fs~dg~~~~l~~~t--~~~V~~~d~~~ 211 (823)
.... .. ...+.. .....-.+|+|+|+|+ .|+++. ...|+.++.++
T Consensus 285 tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~--~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 285 NGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK--YAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS--EEEEEETTTTEEEEEEEET
T ss_pred CceeecccccccccccceeEecCCCCCceEEEEcCCCC--EEEEEeCCCCEEEEEecCC
Confidence 0000 00 012222 2233457999999994 566664 34688877654
No 355
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=85.77 E-value=5.3 Score=37.40 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=34.9
Q ss_pred HHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 340 LFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 340 L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
++..++|+.|.++++...-++.....++...|..++..|+|++|...|.+.+.
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 54 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQ 54 (203)
T ss_dssp -----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 45789999999933321112223566777889999999999999999988754
No 356
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.67 E-value=43 Score=36.16 Aligned_cols=131 Identities=11% Similarity=0.175 Sum_probs=76.2
Q ss_pred EEEEEcCCeEEEEEecCCCCcceEEccC---C-CccceecccCCCeEEE-eeCCeEEEEecC-CC---C------c----
Q 037368 195 QLFAVTPNSVILFSLQNQPPKRQFLDNI---G-CSTNSVAMSDRLELII-GRPEAVYFYEVD-GR---G------P---- 255 (823)
Q Consensus 195 ~l~~~t~~~V~~~d~~~~~~~~~~l~~~---~-~~~~~~~~s~~~~liv-~~~~~I~i~~~~-g~---~------~---- 255 (823)
-++++.++.|+..++.... .-+.+... . ..+..+.+||+|.+++ .++..|.+..+- +. . +
T Consensus 34 ~i~~a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 34 RIVFIQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEEEETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEEEECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccccee
Confidence 4666666777777766432 33444322 1 1455678899998764 566688876543 21 1 0
Q ss_pred cccc-------cCCeEEEEee-----CcEEEEEEecCCCCccEEEEEeCCCCE------------EEEeccccceeEE-E
Q 037368 256 CWAF-------EGEKKLLGWF-----RGYLLCVIADQRNSKNIFNVYDLKNRL------------IAHSLVVKEVSHM-L 310 (823)
Q Consensus 256 ~~~~-------~g~~~~i~~~-----~~ylv~~s~d~~~~~~~I~I~D~~~~~------------i~~~~~i~~v~~v-~ 310 (823)
++.+ +.....+-|+ +..||++.. +++|++||+.... -+.......+..+ |
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts-----D~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE-----DDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET-----TSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEec-----CCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 1222 1224566675 568888884 5899999997511 1112222334443 5
Q ss_pred eecC-cEEEEE--cCCeEEEEeec
Q 037368 311 CEWG-NIILVM--TDKSVLCIGEK 331 (823)
Q Consensus 311 ~~~~-~~~vvs--~~~~v~~l~~~ 331 (823)
..++ .+|+++ .+|+||.+.|.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAlcP~ 211 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAFYPF 211 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEESSC
T ss_pred cCCCcEEEEEecCCCCCEEEECCC
Confidence 5433 378877 77999999763
No 357
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=85.56 E-value=2.8 Score=40.67 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=40.3
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+ ....++...|..++..|+|++|...|-+.+.
T Consensus 64 a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 119 (243)
T 2q7f_A 64 ANLLSSVNELERALAFYDKALELDS-SAATAYYGAGNVYVVKEMYKEAKDMFEKALR 119 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCC-cchHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45667889999999988752 1111 1245666778888999999999999987743
No 358
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=85.54 E-value=1.7 Score=42.66 Aligned_cols=100 Identities=12% Similarity=0.020 Sum_probs=57.6
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCC--------cceEEEeecCCeEEEEEEcCCeE
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCS--------VMGLGFRVDGQALQLFAVTPNSV 204 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~--------It~l~fs~dg~~~~l~~~t~~~V 204 (823)
++.+||+|++.. .|+ .+|. ||+++... .....+...... -..+.|.++| .|++++++.|
T Consensus 43 ~~~laf~P~G~L---YaV--~~G~--Ly~~~~~t---~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G---~LYav~dG~i 109 (236)
T 1tl2_A 43 FKFLFLSPGGEL---YGV--LNDK--IYKGTPPT---HDNDNWMGRAKKIGNGGWNQFQFLFFDPNG---YLYAVSKDKL 109 (236)
T ss_dssp CSEEEECTTSCE---EEE--ETTE--EEEESCCC---STTCCHHHHCEEEECSCGGGCSEEEECTTS---CEEEEETTEE
T ss_pred ceeEEECCCccE---EEE--eCCe--EEEECCCC---CCcccccccccEecccccccceEEEECCCC---CEEEeCCCEE
Confidence 889999999988 888 6886 55544211 111111111111 3678888888 4666777777
Q ss_pred EEEEecCCC--C---cceEEccCC-CccceecccCCCeEEEeeCCeE
Q 037368 205 ILFSLQNQP--P---KRQFLDNIG-CSTNSVAMSDRLELIIGRPEAV 245 (823)
Q Consensus 205 ~~~d~~~~~--~---~~~~l~~~~-~~~~~~~~s~~~~liv~~~~~I 245 (823)
+-++-.+.+ . ....+-..+ ..+.++.+.|+|.+.++.++.+
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~dg~l 156 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQF 156 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEeCCcE
Confidence 766642221 1 111121222 3456788889998765556664
No 359
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.31 E-value=5.1 Score=43.95 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=26.8
Q ss_pred HHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 339 MLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.+...++|+.|++..+.. ...+. ...+...|..++..|+|++|...|-+.+
T Consensus 246 ~~~~~~~~~~A~~~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 297 (514)
T 2gw1_A 246 FKFLKNDPLGAHEDIKKAIELFPR--VNSYIYMALIMADRNDSTEYYNYFDKAL 297 (514)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHTSSCCTTGGGHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhhCcc--HHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 344556666666655441 11111 3444555666666666666666665554
No 360
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=85.12 E-value=4.6 Score=44.77 Aligned_cols=19 Identities=5% Similarity=0.177 Sum_probs=11.4
Q ss_pred cCcHHHHHHHHHHHhhcCC
Q 037368 577 HHPESLMDFLEKYTNKVKD 595 (823)
Q Consensus 577 ~~~~~~~~yLe~~i~~~~~ 595 (823)
++.+..+.+++..+...+.
T Consensus 476 g~~~~A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 476 EKIDEAIELFEDSAILART 494 (537)
T ss_dssp TCHHHHHHHHHHHHHHC--
T ss_pred ccHHHHHHHHHHHHHhCCC
Confidence 3566677777777766553
No 361
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=84.69 E-value=11 Score=36.19 Aligned_cols=74 Identities=16% Similarity=0.141 Sum_probs=42.5
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHH------HHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHh
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVI------QKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTK 439 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI------~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~k 439 (823)
.+...|..++..|+|++|+..|-+.+. .+|...- .-+...++...=+.++....+....+..-...|-.+|.+
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALK-ENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT-TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 455678889999999999999998864 3442221 122334444444445555443333344433445555555
Q ss_pred c
Q 037368 440 L 440 (823)
Q Consensus 440 l 440 (823)
+
T Consensus 86 ~ 86 (217)
T 2pl2_A 86 L 86 (217)
T ss_dssp H
T ss_pred h
Confidence 4
No 362
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=84.33 E-value=5.4 Score=39.45 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=41.2
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCC--HHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QAD--AAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~--~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..-..+...++|+.|++..+.. ..+ +......+...|..++..|+|++|+..|-+.+.
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~ 102 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3445677889999999887752 111 222345567778888899999999999988753
No 363
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=84.32 E-value=62 Score=36.80 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.6
Q ss_pred EEEEecCCeEEEEc-CCCeeeEeEe
Q 037368 38 VVIGCDDGAVSLLD-RGLKFNFGFQ 61 (823)
Q Consensus 38 l~~gs~dG~i~~~d-~~~~~~~~~~ 61 (823)
+++++.||.|.-+| .+|+++-.++
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~ 148 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVE 148 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeec
Confidence 99999999999999 7899875554
No 364
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=83.90 E-value=7.5 Score=41.11 Aligned_cols=116 Identities=10% Similarity=0.047 Sum_probs=65.5
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEccccccc--ccceeEEecCCCCcceEEEeec---CCeEEEEEEc-------
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARER--ITRFKLQVDNQCSVMGLGFRVD---GQALQLFAVT------- 200 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~--~~k~~~~~~~~~~It~l~fs~d---g~~~~l~~~t------- 200 (823)
++.++|+||++. +.++..+|.|.+++.+-.... .....+.....+...+|+|+|+ + ..||++.
T Consensus 20 P~~i~~~pdG~~---l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~--g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 20 PWALAFLPDNHG---MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQS--RRIWLSYSEVGDDG 94 (353)
T ss_dssp EEEEEECSTTCC---EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHH--CEEEEEEEEECSSS
T ss_pred cEEEEEcCCCCE---EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCC--CEEEEEEeCCCCCC
Confidence 699999999994 445556899998874310000 0000111223345689999985 3 2455553
Q ss_pred --CCeEEEEEecCCC----CcceEEccC------CCccceecccCCCeEEEeeC---------------CeEEEEecCCC
Q 037368 201 --PNSVILFSLQNQP----PKRQFLDNI------GCSTNSVAMSDRLELIIGRP---------------EAVYFYEVDGR 253 (823)
Q Consensus 201 --~~~V~~~d~~~~~----~~~~~l~~~------~~~~~~~~~s~~~~liv~~~---------------~~I~i~~~~g~ 253 (823)
.+.|..|+++... ....+++.. ......++|.|||.+.++.+ +.|.-++++|+
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2357777775431 112223211 11235689999999877642 25766777765
No 365
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=83.67 E-value=4.2 Score=36.80 Aligned_cols=51 Identities=18% Similarity=0.092 Sum_probs=36.9
Q ss_pred HhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 342 KKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 342 ~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.++.++.|++..+..--........+-..|.-++..|+|++|+..|-+.+.
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYIN 59 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467889999877764322333444555668888999999999999988753
No 366
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=83.23 E-value=13 Score=36.39 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=40.8
Q ss_pred HHHHHHhccHHHHHHHHHhcC--------CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQQ--------ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~~--------~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+..- -+......++...|..++..|+|++|...|.+.+.
T Consensus 50 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 50 ALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345556788888887766420 11234566778889999999999999999988754
No 367
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=82.51 E-value=52 Score=34.56 Aligned_cols=189 Identities=8% Similarity=0.119 Sum_probs=100.5
Q ss_pred EEEEEecCCeEEEEcCCCeeeEeEeecccceeEEEEecC----CC---E-EEEEec--CCCCcccccceeEEEEeCCCCC
Q 037368 37 KVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQ----RN---F-LVTVGE--DEQVSAQQSAVCLKVFDLDKME 106 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~----~~---~-l~s~s~--D~~~~~~~~~~~vkvWdl~~~~ 106 (823)
.++.....+-+.+||-+|+.+..+.. ++++.+.+-|+ |+ + ++|... +++ |.+++++...
T Consensus 42 ~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~---------l~vf~iDp~~ 110 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT---------IEIYAIDGKN 110 (355)
T ss_dssp EEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCE---------EEEEEECTTT
T ss_pred EEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCe---------EEEEEECCCC
Confidence 44444577889999999998877654 67777777662 21 1 334433 344 9999885321
Q ss_pred CCCCCCCCCceEEEEEeccCCCC---C-CceEEEEE--ecCCC--CcceEEEEEeCCeEEEEEcccccccccceeEE--e
Q 037368 107 PEGTSSTSPDCIGILRVFTSQFP---E-AKITSFLV--LEEAP--PILLIAIGLDNGCIYCIKGDIARERITRFKLQ--V 176 (823)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~p---~-~~v~~va~--~~d~~--~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~ 176 (823)
. .+..+. ....| + ..+..+|+ +|... + +.+...+|.+..|+..-..+.....+.+ +
T Consensus 111 -------~--~l~~i~--~~~~pv~t~~~~pyGlcly~~~~~g~~y---afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 111 -------G--TLQSMT--DPDHPIATAINEVYGFTLYHSQKTGKYY---AMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp -------C--CEEECS--CTTSCEECCCSSCCCEEEEECTTTCCEE---EEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred -------C--ceeecc--ccccCcCCCCCCeeEEEEEecCCCCcEE---EEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 1 122221 00001 0 22566777 77433 3 5555667888888642110000111112 2
Q ss_pred cCCCCcceEEEeecCCeEEEEEEcCC-eEEEEEecCCC-CcceEEc--cCC---Cccceecc--cCCC--eEEEee--CC
Q 037368 177 DNQCSVMGLGFRVDGQALQLFAVTPN-SVILFSLQNQP-PKRQFLD--NIG---CSTNSVAM--SDRL--ELIIGR--PE 243 (823)
Q Consensus 177 ~~~~~It~l~fs~dg~~~~l~~~t~~-~V~~~d~~~~~-~~~~~l~--~~~---~~~~~~~~--s~~~--~liv~~--~~ 243 (823)
...+.+-++...+.. ..||++-.+ +|+.|+.+... ...+.+. ..+ ..+.-+++ .+++ .+++++ ++
T Consensus 177 ~lgsq~EgcvvDd~~--g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 177 KMNSQTEGMAADDEY--GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp ECSSCEEEEEEETTT--TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred cCCCCcceEEEcCCC--CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 334567888887654 368888764 57777754332 1112221 112 23455555 3443 455554 45
Q ss_pred eEEEEecCC
Q 037368 244 AVYFYEVDG 252 (823)
Q Consensus 244 ~I~i~~~~g 252 (823)
+..+|+.++
T Consensus 255 s~~Vydr~~ 263 (355)
T 3amr_A 255 SYAIYDRQG 263 (355)
T ss_dssp EEEEEESST
T ss_pred EEEEEECCC
Confidence 888898763
No 368
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=81.82 E-value=5 Score=34.32 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=41.6
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..-..+...++|+.|++..+.. ...+. -..++...|.-++..|+|++|...|-+.+.
T Consensus 21 ~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 21 NKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3456677889999999988762 22221 245667778888999999999999887753
No 369
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=81.46 E-value=16 Score=33.51 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=43.2
Q ss_pred HHHHHHHHHhccHHHHHHHHHhcC-CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQQ-ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~~-~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..-..+++.++|+.|+...+..- .++. -...+...|.-++..|++++|...|-+.+
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~~~~a~ 67 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQS-RGDVKLAKADCLLETKQFELAQELLATIP 67 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHHT-SHHHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHhh
Confidence 345577889999999999987631 1121 24567777888999999999999987764
No 370
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.75 E-value=34 Score=32.04 Aligned_cols=82 Identities=11% Similarity=0.082 Sum_probs=47.0
Q ss_pred HHHHHHHHhcCChhhHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHHhCChHHHHHHHHHhhcCHHHHHHHH
Q 037368 431 TLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYI 510 (823)
Q Consensus 431 ~lLl~~y~kl~~~~~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~~~~~~~~l~il~~~~~~~~~al~yl 510 (823)
.+--.||.+++|.++|.-+-... |+ .=.+...-++....|.+.-|...+-..|+.+..+++|++- +++.+|.-+-
T Consensus 51 ~lAe~cy~~~~D~~~L~~Ly~~t---g~-~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~-~r~~eA~~~A 125 (177)
T 3mkq_B 51 SLAEMIYQTQHSFDKLSFLYLVT---GD-VNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEG-GSLPLAYAVA 125 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH---TC-HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT-TCHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHh---CC-HHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHC-CChHHHHHHH
Confidence 34556888888877664331111 11 1112333444556666666666666666777777776655 6777766666
Q ss_pred hcCChHH
Q 037368 511 SSLDPSQ 517 (823)
Q Consensus 511 ~~l~~~~ 517 (823)
++.++++
T Consensus 126 ~t~g~~~ 132 (177)
T 3mkq_B 126 KANGDEA 132 (177)
T ss_dssp HHTTCHH
T ss_pred HHcCcHH
Confidence 6655543
No 371
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=80.61 E-value=5.7 Score=46.68 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=37.1
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+.+.|+|++|++..++. .+.+. ....+...|.-|+..|+|++|+..|-+.+
T Consensus 17 ~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al 70 (723)
T 4gyw_A 17 NIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAI 70 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4566788999998877662 12111 23456667888888999999998888775
No 372
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=80.55 E-value=17 Score=35.87 Aligned_cols=56 Identities=18% Similarity=0.193 Sum_probs=41.3
Q ss_pred HHHHHHhccHHHHHHHHHhc--CCCHH-HHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ--QADAA-ATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~--~~~~~-~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+++.++|+.|+...+.. ..|.. .....+...|.-++..|+|++|+..|-+.+.
T Consensus 22 a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 22 AMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 45667889999999988762 11211 2356667778889999999999999987654
No 373
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.53 E-value=54 Score=33.53 Aligned_cols=219 Identities=10% Similarity=0.059 Sum_probs=114.4
Q ss_pred eeCCCEEEEEe--cCCeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEecCCCCccc-----ccceeEEEEeCCC
Q 037368 32 SSGRGKVVIGC--DDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQ-----QSAVCLKVFDLDK 104 (823)
Q Consensus 32 ~~~~~~l~~gs--~dG~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~-----~~~~~vkvWdl~~ 104 (823)
+..++.|++.. .++.|...+.+|...+.+.... +. .+.++|++|.-++.......+ +..-.|...+++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~--~~--~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT--AM--YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE--EE--EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc--ee--eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 35677787764 3677888887765444454332 33 446788998877664310000 0001155555553
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEE--eCCeEEEEEcccccccccceeEEecCCCCc
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGL--DNGCIYCIKGDIARERITRFKLQVDNQCSV 182 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~--~dG~V~l~~~~~~~~~~~k~~~~~~~~~~I 182 (823)
. ... .+. ..+ .. +|++++.. |+... .+|.-.||+.++ .+...+.+..+. +
T Consensus 98 ~--------~~~---~l~----~~~---~~--~~s~~g~~---Iy~~~~~~~~~~~Iy~~~~---dGs~~~~lt~~~--~ 149 (302)
T 3s25_A 98 H--------GST---VLD----PDP---CI--YASLIGNY---IYYLHYDTQTATSLYRIRI---DGEEKKKIKNHY--L 149 (302)
T ss_dssp C--------CCE---EEE----CSC---EE--EEEEETTE---EEEEEESSSSCEEEEEEET---TSCCCEEEESSC--C
T ss_pred C--------cce---Eee----cCC---cc--EEEEeCCE---EEEEeecCCCCceEEEEEC---CCCCeEEEeCCC--c
Confidence 2 111 121 122 33 56777778 87665 356666666543 122333344332 2
Q ss_pred ceEEEeecCCeEEEEEEcC--CeEEEEEecCCCCcceEEccCCCccceecccCCCeE-E-EeeCC--eEEEEecCCCCcc
Q 037368 183 MGLGFRVDGQALQLFAVTP--NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLEL-I-IGRPE--AVYFYEVDGRGPC 256 (823)
Q Consensus 183 t~l~fs~dg~~~~l~~~t~--~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~l-i-v~~~~--~I~i~~~~g~~~~ 256 (823)
..|+|+|+ .|+++++ .+|+..++.++. ...++. +. .. ..+.|++.. . +.+++ .|..-+++|....
T Consensus 150 --~~~~~~g~--~iy~t~~g~~~Iy~~~l~g~~-~~~l~~--~~-~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~ 220 (302)
T 3s25_A 150 --FTCNTSDR--YFYYNNPKNGQLYRYDTASQS-EALFYD--CN-CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV 220 (302)
T ss_dssp --CCSEEETT--EEEEECTTTCCEEEEETTTTE-EEEEEC--SC-EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCE
T ss_pred --eEeeEECC--EEEEEeCCCceEEEEECCCCC-EEEEeC--CC-cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeE
Confidence 45678884 5777765 357777776643 223333 11 11 234475553 3 33433 5666677766543
Q ss_pred ccccCCeEEEEeeCcEEEEEEecCCCCccEEEEEeCCC
Q 037368 257 WAFEGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKN 294 (823)
Q Consensus 257 ~~~~g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~ 294 (823)
...++....+.+.+.+|.-.+.. ..+.|...++++
T Consensus 221 ~Lt~~~~~~~~~~g~~Iy~~~~~---~~~~i~~~~~DG 255 (302)
T 3s25_A 221 VLTEANIEHYNVYGSLIFYQRGG---DNPALCVVKNDG 255 (302)
T ss_dssp ECSCSCEEEEEEETTEEEEEECS---SSCEEEEEETTS
T ss_pred EEeCCCcceEEECCCEEEEEECC---CCcEEEEEECCC
Confidence 22233333477788888544322 236788888876
No 374
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=80.20 E-value=36 Score=35.75 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=35.1
Q ss_pred eCCCEEEEEecCCeEEEEcCCCeeeEeEee------cccceeEEEEecC----CCEEEEEec
Q 037368 33 SGRGKVVIGCDDGAVSLLDRGLKFNFGFQA------HSSSVLFLQQLKQ----RNFLVTVGE 84 (823)
Q Consensus 33 ~~~~~l~~gs~dG~i~~~d~~~~~~~~~~~------H~~~V~~i~~~~~----~~~l~s~s~ 84 (823)
.+++.|+++..+|.|++++.+++ ..+.. -......|+++|+ +.+.++-+.
T Consensus 37 ~pdG~l~V~e~~g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 37 LGGGRYLVTERPGRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EETTEEEEEETTTEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred cCCCeEEEEeCCCEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 45678999999999999987665 23321 1256889999997 555566553
No 375
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=80.08 E-value=16 Score=41.68 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=21.4
Q ss_pred EEEEEecCCeEEEEc-CCCeeeEeEee
Q 037368 37 KVVIGCDDGAVSLLD-RGLKFNFGFQA 62 (823)
Q Consensus 37 ~l~~gs~dG~i~~~d-~~~~~~~~~~~ 62 (823)
.++.|+.+|.++.+| .+|+++..+..
T Consensus 338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 338 ATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCceEEEEECCCCCEeccccc
Confidence 678899999999999 77888766553
No 376
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=80.03 E-value=5.8 Score=33.62 Aligned_cols=54 Identities=30% Similarity=0.474 Sum_probs=36.7
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
...+...++++.|+++.+.. ...+. ....+...|..++..|++++|...|.+.+
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 62 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKAL 62 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45667788999999877652 11111 12345566777888899999999887764
No 377
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=79.87 E-value=8 Score=37.53 Aligned_cols=19 Identities=16% Similarity=0.004 Sum_probs=12.1
Q ss_pred HHHHHHhccHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQS 355 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~ 355 (823)
-..+...++|+.|++..+.
T Consensus 86 ~~~~~~~~~~~~A~~~~~~ 104 (258)
T 3uq3_A 86 GNAYHKLGDLKKTIEYYQK 104 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHH
Confidence 3455566777777776654
No 378
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=79.46 E-value=6.2 Score=37.39 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=88.0
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccC-CCHHHHHHHHHHHhCC-cChHH------HHHHhhchh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSK-QDYDEAMSQYILTIGH-LEPSY------VIQKFLDAQ 407 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k-~~y~~A~~~y~~ti~~-~eps~------vI~kFl~~~ 407 (823)
-..+...++++.|++..+.. ...+. ...++...|..++.. |+|++|...|-+.+.. ..|.. ...-+...+
T Consensus 49 ~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (225)
T 2vq2_A 49 AEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQG 127 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcC
Confidence 45667889999999987762 11111 234667778889999 9999999999988761 12211 122334455
Q ss_pred hHHHHHHHHHHHHHcCCCChhHHHHHHHHHHhcCChhh----HHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHH
Q 037368 408 RIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEK----LNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVA 483 (823)
Q Consensus 408 ~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl~~~~~----l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la 483 (823)
+.+.=..++....+....+......+..+|.++++.++ +.+.++..+ .....-......++...|..+.+..+.
T Consensus 128 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~ 205 (225)
T 2vq2_A 128 QFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE--VLQADDLLLGWKIAKALGNAQAAYEYE 205 (225)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66655566665444444444444556678888877543 344443321 001111234555667889999888777
Q ss_pred HH
Q 037368 484 KK 485 (823)
Q Consensus 484 ~~ 485 (823)
+.
T Consensus 206 ~~ 207 (225)
T 2vq2_A 206 AQ 207 (225)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 379
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=79.20 E-value=81 Score=35.79 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=40.0
Q ss_pred CCCEEEEEecCC----------------eEEEEc-CCCeeeEeEee--cc--------cceeEEEEe-cCC---CEEEEE
Q 037368 34 GRGKVVIGCDDG----------------AVSLLD-RGLKFNFGFQA--HS--------SSVLFLQQL-KQR---NFLVTV 82 (823)
Q Consensus 34 ~~~~l~~gs~dG----------------~i~~~d-~~~~~~~~~~~--H~--------~~V~~i~~~-~~~---~~l~s~ 82 (823)
..+.+++|+.++ .|.-+| .+|+.+-.|+. |. .++. +... .+| ..++.+
T Consensus 251 ~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~ 329 (599)
T 1w6s_A 251 GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHP 329 (599)
T ss_dssp TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEE
T ss_pred CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEE
Confidence 457888887664 799999 78998877764 32 1222 2221 456 467777
Q ss_pred ecCCCCcccccceeEEEEeCCC
Q 037368 83 GEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 83 s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
+.+|. +.+.|..+
T Consensus 330 ~~~G~---------l~~lD~~t 342 (599)
T 1w6s_A 330 DRNGI---------VYTLDRTD 342 (599)
T ss_dssp CTTSE---------EEEEETTT
T ss_pred CCCcE---------EEEEECCC
Confidence 78876 77777764
No 380
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=79.14 E-value=7.4 Score=37.47 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=38.4
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
=..++..++|+.|++..+.. .+.+..-..++...|.-++..|+|++|+..|-+.+.
T Consensus 14 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 14 GNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 35667889999999877652 111100113444468888999999999999988864
No 381
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=79.02 E-value=3.2 Score=37.59 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=40.5
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+.+.++|+.|++..++. .+++. -...+...|.-++..|+|++|+..|-+.+
T Consensus 39 ~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 39 KLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 4567889999999987762 12221 24567778999999999999999998875
No 382
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=78.50 E-value=4.8 Score=34.14 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=38.1
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|+..|.+.+.
T Consensus 19 ~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 19 GNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHh
Confidence 34556788999999877652 11111 134566778888899999999999887753
No 383
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.71 E-value=5.1 Score=34.98 Aligned_cols=54 Identities=13% Similarity=0.320 Sum_probs=30.1
Q ss_pred HHHHHhccHHHHHHHHHhc-------CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-------QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-------~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+++.++|+.|++.++.. ......+..++...|..+...|+|++|+..|-+.+
T Consensus 50 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 50 AVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445566666666655431 11122334455556666667777777777666653
No 384
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=77.07 E-value=3.1 Score=34.61 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=48.6
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHHHHhhchhhHHHHHHHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYL 416 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl~~~~~~~L~~YL 416 (823)
..+++.++|+.|++..+.. .+++. ....+...|.-++..|+|++|+..|-+.+. +..+..+......+...|
T Consensus 15 ~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~------l~~~~~~~~~~~~l~~~l 87 (100)
T 3ma5_A 15 QEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIE------VAREEGTQKDLSELQDAK 87 (100)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HHHHHSCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------hhhcCCchhHHHHHHHHH
Confidence 4566789999999887752 11111 123566778888999999999999888642 222333444455555555
Q ss_pred HHHH
Q 037368 417 EKLH 420 (823)
Q Consensus 417 ~~l~ 420 (823)
..+.
T Consensus 88 ~~~~ 91 (100)
T 3ma5_A 88 LKAE 91 (100)
T ss_dssp HHHH
T ss_pred HHcc
Confidence 5543
No 385
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=76.46 E-value=31 Score=38.37 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhC------C---hHHHHHHHHHhhcCHHHHHHHHhcC
Q 037368 464 ETAIRVCRAANYHEHAMYVAKKAG------K---HELYLKILLEDLGRYDEALQYISSL 513 (823)
Q Consensus 464 ~~ai~vl~~~g~~~~a~~la~~~~------~---~~~~l~il~~~~~~~~~al~yl~~l 513 (823)
.+.|..|-++|..++|..+..... + +..+++.+... |++++|++++.++
T Consensus 144 n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~-g~~d~A~~ll~~M 201 (501)
T 4g26_A 144 GPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDT-KNADKVYKTLQRL 201 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHH
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhC-CCHHHHHHHHHHH
Confidence 345555555566665555554321 1 11234444444 7777777776654
No 386
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=75.71 E-value=8.9 Score=40.48 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=58.3
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCCCCcceEEEeec---CCeEEEEEEcC-------C
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVD---GQALQLFAVTP-------N 202 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~~~It~l~fs~d---g~~~~l~~~t~-------~ 202 (823)
++.++|+||++. +++ -.+|.|.+++ +-..+.-....+.........+|+|+|+ + ..||++.. +
T Consensus 33 P~~ia~~pdG~l---~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~--g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 33 PWALAFLPDGGM---LIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQE--PYVYAYRTVAEGGLRN 105 (352)
T ss_dssp EEEEEECTTSCE---EEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTS--CEEEEEEEECTTSSEE
T ss_pred ceEEEEcCCCeE---EEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCC--CEEEEEEecCCCCCcc
Confidence 689999999975 554 4579999886 2000000000011223445789999998 3 24666643 5
Q ss_pred eEEEEEecCCC--CcceEEcc------CCCccceecccCCCeEEEee
Q 037368 203 SVILFSLQNQP--PKRQFLDN------IGCSTNSVAMSDRLELIIGR 241 (823)
Q Consensus 203 ~V~~~d~~~~~--~~~~~l~~------~~~~~~~~~~s~~~~liv~~ 241 (823)
.|..|+..+.. ....+++. .......++|.|||.+.++.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 68888876421 11122221 11223568899999987753
No 387
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=75.35 E-value=24 Score=34.34 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=37.8
Q ss_pred ccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 344 NLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 344 ~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..|+.|+++.+.. +.+......++...|..++..|+|++|...|-+.+.
T Consensus 22 ~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 71 (283)
T 3edt_B 22 PLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALA 71 (283)
T ss_dssp HHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 4578888888763 223345677888899999999999999999988753
No 388
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=74.85 E-value=78 Score=32.31 Aligned_cols=197 Identities=12% Similarity=0.088 Sum_probs=93.1
Q ss_pred eEEEeeCCCEEEEEe-cC-------------CeEEEEcCCCeeeEeEeecccceeEEEEecCCCEEEEEe--cCCCCccc
Q 037368 28 ITCCSSGRGKVVIGC-DD-------------GAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVG--EDEQVSAQ 91 (823)
Q Consensus 28 is~~~~~~~~l~~gs-~d-------------G~i~~~d~~~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s--~D~~~~~~ 91 (823)
++.+...+++|+.+. ++ +.|+..+.++.....+....+ ..++++++.|+=+. .++..
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~~----~~~s~~g~~Iy~~~~~~~~~~--- 129 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDPC----IYASLIGNYIYYLHYDTQTAT--- 129 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSCE----EEEEEETTEEEEEEESSSSCE---
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCCc----cEEEEeCCEEEEEeecCCCCc---
Confidence 444555667776554 32 467777755543223322211 25566788877655 34430
Q ss_pred ccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEe-CCeEEEEEccccccccc
Q 037368 92 QSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLD-NGCIYCIKGDIARERIT 170 (823)
Q Consensus 92 ~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~-dG~V~l~~~~~~~~~~~ 170 (823)
. |..-+++.. . .+.+. . .+ + .+++|+++. |..... ...|...+.+ +.
T Consensus 130 ~----Iy~~~~dGs--------~---~~~lt--~--~~---~--~~~~~~g~~---iy~t~~g~~~Iy~~~l~-----g~ 177 (302)
T 3s25_A 130 S----LYRIRIDGE--------E---KKKIK--N--HY---L--FTCNTSDRY---FYYNNPKNGQLYRYDTA-----SQ 177 (302)
T ss_dssp E----EEEEETTSC--------C---CEEEE--S--SC---C--CCSEEETTE---EEEECTTTCCEEEEETT-----TT
T ss_pred e----EEEEECCCC--------C---eEEEe--C--CC---c--eEeeEECCE---EEEEeCCCceEEEEECC-----CC
Confidence 0 433444421 1 11222 1 11 2 356788877 776543 3344444321 22
Q ss_pred ceeEEecCCCCcceEEEeecCCeEEEEEEc-CC--eEEEEEecCCCCcceEEccCCCccceecccCCCeEE-Eee---CC
Q 037368 171 RFKLQVDNQCSVMGLGFRVDGQALQLFAVT-PN--SVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELI-IGR---PE 243 (823)
Q Consensus 171 k~~~~~~~~~~It~l~fs~dg~~~~l~~~t-~~--~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~li-v~~---~~ 243 (823)
..+.+.++ +.. ..+.|++. .|+++. .+ .|..-++++.. .++|... .+ ..++|++..+ .+. .+
T Consensus 178 ~~~~l~~~--~~~-~~~~P~g~--~iy~t~~~~~~~I~~~~ldG~~--~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~ 246 (302)
T 3s25_A 178 SEALFYDC--NCY-KPVVLDDT--NVYYMDVNRDNAIVHVNINNPN--PVVLTEA--NI--EHYNVYGSLIFYQRGGDNP 246 (302)
T ss_dssp EEEEEECS--CEE-EEEEEETT--EEEEEEGGGTTEEEEECSSSCC--CEECSCS--CE--EEEEEETTEEEEEECSSSC
T ss_pred CEEEEeCC--Ccc-ceeeecCC--EEEEEEcCCCcEEEEEECCCCC--eEEEeCC--Cc--ceEEECCCEEEEEECCCCc
Confidence 23344432 222 34567774 566654 22 46666666542 3444322 12 2366766533 332 24
Q ss_pred eEEEEecCCCCccccccCCeEEEEeeCcEEE
Q 037368 244 AVYFYEVDGRGPCWAFEGEKKLLGWFRGYLL 274 (823)
Q Consensus 244 ~I~i~~~~g~~~~~~~~g~~~~i~~~~~ylv 274 (823)
.|...+++|+.......+....+..++++|.
T Consensus 247 ~i~~~~~DG~~r~~l~~~~~~~i~i~~d~Iy 277 (302)
T 3s25_A 247 ALCVVKNDGTGFKELAKGEFCNINVTSQYVY 277 (302)
T ss_dssp EEEEEETTSCCCEEEEESCEEEEEECSSEEE
T ss_pred EEEEEECCCCccEEeeCCccceEEEeCCEEE
Confidence 6666777776543222233334444555544
No 389
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=74.30 E-value=90 Score=32.76 Aligned_cols=132 Identities=10% Similarity=0.018 Sum_probs=69.2
Q ss_pred eEEEEEec--CCC--CcceEEEEEe--CCeEEEEEcccccccccceeEEe--cC--CCCcceEEEeecCCeEEEEEEcC-
Q 037368 133 ITSFLVLE--EAP--PILLIAIGLD--NGCIYCIKGDIARERITRFKLQV--DN--QCSVMGLGFRVDGQALQLFAVTP- 201 (823)
Q Consensus 133 v~~va~~~--d~~--~~~~ia~G~~--dG~V~l~~~~~~~~~~~k~~~~~--~~--~~~It~l~fs~dg~~~~l~~~t~- 201 (823)
+..+.+.+ ++. . +++-.. +++|.+|+.+. .+.....+. ++ -...+.+.+.++| . +++++.
T Consensus 114 PhGi~~~~d~dg~~~L---~Vvnh~~~~s~ielf~~d~---~~~~~~~~~~~~g~~~~~pND~~v~~~G--~-fyvt~~~ 184 (355)
T 3sre_A 114 PHGISTFIDDDNTVYL---LVVNHPGSSSTVEVFKFQE---EEKSLLHLKTIRHKLLPSVNDIVAVGPE--H-FYATNDH 184 (355)
T ss_dssp EEEEEEEECTTCCEEE---EEEECSTTCCEEEEEEEET---TTTEEEEEEEECCTTCSSEEEEEEEETT--E-EEEEESC
T ss_pred eeeeEEEECCCCcEEE---EEEECCCCCCeEEEEEEEC---CCCEEEEEeccccCCCCCCceEEEeCCC--C-EEecCCc
Confidence 67777766 343 3 555444 56788887542 111122221 22 1345678888888 2 444432
Q ss_pred ------------------CeEEEEEecCCCCcceEEccCCCccceecccCCCe-EEEe--eCCeEEEEecCCCCc-----
Q 037368 202 ------------------NSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLE-LIIG--RPEAVYFYEVDGRGP----- 255 (823)
Q Consensus 202 ------------------~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~-liv~--~~~~I~i~~~~g~~~----- 255 (823)
+.|+.|+. . ....+.++. ..++-++||||++ +.++ ....|+.|+.++.+.
T Consensus 185 ~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~~~~~~~~l-~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~ 260 (355)
T 3sre_A 185 YFIDPYLKSWEMHLGLAWSFVTYYSP--N-DVRVVAEGF-DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLR 260 (355)
T ss_dssp SCSSHHHHHHHHHTTCCCEEEEEECT--T-CCEEEEEEE-SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EeCCcccccchhhccCCccEEEEEEC--C-eEEEeecCC-cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCE
Confidence 12444443 2 222333322 3457889999986 4444 346899998864432
Q ss_pred cccccCCeEEEEee---CcEEEEEE
Q 037368 256 CWAFEGEKKLLGWF---RGYLLCVI 277 (823)
Q Consensus 256 ~~~~~g~~~~i~~~---~~ylv~~s 277 (823)
.+.+.+.+-.++.+ |+..++..
T Consensus 261 ~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 261 VLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEeCCCCCceEEEeCCCCcEEEEec
Confidence 12334555566654 44444443
No 390
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=74.04 E-value=35 Score=35.83 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=33.1
Q ss_pred HHHHHHHHHh-------cCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 346 YTVAINLVQS-------QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 346 f~~Al~la~~-------~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
|+.|++..+. .+ +......++...|..++..|+|++|...|.+.+
T Consensus 199 ~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 250 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLG-DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERL 250 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 7777766543 22 233455677788999999999999999998764
No 391
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=73.11 E-value=2.8 Score=34.34 Aligned_cols=57 Identities=16% Similarity=0.257 Sum_probs=41.7
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.+-..++..++|+.|++..+.. ...+.....++...|.-++..|+|++|+..|-+.+
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 62 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAI 62 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456778899999999988762 11111112267777999999999999999998874
No 392
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=72.94 E-value=1.3e+02 Score=33.93 Aligned_cols=51 Identities=14% Similarity=0.089 Sum_probs=33.8
Q ss_pred CeEEEEc-CCCeeeEeEee--cc--------cceeEEEEe-cCCC---EEEEEecCCCCcccccceeEEEEeCCCC
Q 037368 45 GAVSLLD-RGLKFNFGFQA--HS--------SSVLFLQQL-KQRN---FLVTVGEDEQVSAQQSAVCLKVFDLDKM 105 (823)
Q Consensus 45 G~i~~~d-~~~~~~~~~~~--H~--------~~V~~i~~~-~~~~---~l~s~s~D~~~~~~~~~~~vkvWdl~~~ 105 (823)
+.|.-+| .+|+.+-.|+. |. .+|. +... .+|+ .++.++.+|. +.++|..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~---------l~~lD~~tG 356 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGF---------FYVVDRSNG 356 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSE---------EEEEETTTC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCce---------EEEEECCCC
Confidence 6899999 78998877763 42 1222 2221 3563 6788888887 888887643
No 393
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=72.89 E-value=19 Score=31.19 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 358 ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 358 ~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
++|+ ..+.++..|+.+|.+|+|++|+..|-+.+
T Consensus 8 inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al 40 (126)
T 4gco_A 8 INPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAV 40 (126)
T ss_dssp CCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4553 56677778999999999999999988875
No 394
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=72.42 E-value=57 Score=36.12 Aligned_cols=151 Identities=12% Similarity=0.074 Sum_probs=97.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHh---cCCC--HHHHHHHHHHHhhh-----hccCCCHHHHHHHHHHHh-CCcCh-----H
Q 037368 334 ESKLDMLFKKNLYTVAINLVQS---QQAD--AAATAEVLRKYGDH-----LYSKQDYDEAMSQYILTI-GHLEP-----S 397 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~---~~~~--~~~~~~I~~~y~d~-----L~~k~~y~~A~~~y~~ti-~~~ep-----s 397 (823)
...|+.+.+.|+++.|+++-+. .++. ......+...++.. ....++.++|.+.|-+.. ..+.| .
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn 109 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFT 109 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 4557777889999999998754 4543 33344444444321 234556889999887642 23444 3
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHcCCC-ChhHHHHHHHHHHhcCChhhHHHhhcC---CCCCCcccCCHHHHHHHHHhc
Q 037368 398 YVIQKFLDAQRIYNLTNYLEKLHEKGFA-SKDHTTLLLNCYTKLKDVEKLNMFIKG---EDGVGEHKFDVETAIRVCRAA 473 (823)
Q Consensus 398 ~vI~kFl~~~~~~~L~~YL~~l~~~~~~-~~~~~~lLl~~y~kl~~~~~l~~fi~~---~~~~~~~~~d~~~ai~vl~~~ 473 (823)
.+|.-|...++.+.-...+..+...|.. +......|+..|++.++.+.-.+++.. .....+ .....+.++.|.+.
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~~ 188 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLKVSMDT 188 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhhC
Confidence 5677888888888888888888877765 344456788899998886654444332 110001 23356788888888
Q ss_pred CCHHHHHHHHHH
Q 037368 474 NYHEHAMYVAKK 485 (823)
Q Consensus 474 g~~~~a~~la~~ 485 (823)
|+.++|..+.+.
T Consensus 189 g~~d~A~~ll~~ 200 (501)
T 4g26_A 189 KNADKVYKTLQR 200 (501)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 988888777654
No 395
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.83 E-value=66 Score=38.88 Aligned_cols=30 Identities=33% Similarity=0.453 Sum_probs=26.3
Q ss_pred ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCC
Q 037368 66 SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 66 ~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~ 104 (823)
.|.++...++..+++|.+.|++ +|||++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~---------LRiWsl~t 266 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK---------LKVLDLST 266 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE---------EEEEETTT
T ss_pred eEEEEeecCCCcEEEEEECCCE---------EEEEECCC
Confidence 4677788888899999999998 99999985
No 396
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=71.77 E-value=54 Score=33.79 Aligned_cols=53 Identities=9% Similarity=-0.049 Sum_probs=33.5
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCH-HHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADA-AATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~-~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
..+...+++++|+++++.. +.++ ..-.+.....+.-++..|+.+.|.+.+-+.
T Consensus 108 ~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 108 TAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3444568888888887763 1111 123455556677777888888888877554
No 397
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=71.45 E-value=39 Score=33.71 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=32.0
Q ss_pred HHHHHHHH-------HhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 346 YTVAINLV-------QSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 346 f~~Al~la-------~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
|+.|++.. +..+ +......++...|..++..|+|++|...|-+.+
T Consensus 159 ~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 210 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTALG-DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRL 210 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55555544 3322 234456677788999999999999999988764
No 398
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=71.35 E-value=1e+02 Score=32.22 Aligned_cols=150 Identities=12% Similarity=0.167 Sum_probs=84.4
Q ss_pred EEEEec----CCeEEEE--cCCCeeeEeEee------cc-cceeEEEE--ecC-CC-EEEEEecCCCCcccccceeEEEE
Q 037368 38 VVIGCD----DGAVSLL--DRGLKFNFGFQA------HS-SSVLFLQQ--LKQ-RN-FLVTVGEDEQVSAQQSAVCLKVF 100 (823)
Q Consensus 38 l~~gs~----dG~i~~~--d~~~~~~~~~~~------H~-~~V~~i~~--~~~-~~-~l~s~s~D~~~~~~~~~~~vkvW 100 (823)
++.++. +.+|.+| |+....++.+.. -. ..+..+|+ +|. +. +++..+.+|. +..|
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~---------~~q~ 158 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGE---------FEQY 158 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSE---------EEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCe---------EEEE
Confidence 444543 5689999 444433434421 11 45556776 664 43 5677777776 8888
Q ss_pred eCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE--ecC
Q 037368 101 DLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ--VDN 178 (823)
Q Consensus 101 dl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~--~~~ 178 (823)
.+..... + .-+.+.++++.+. +.+-.+++++.... +.+|-.+-. ||+.+.--+.+...+.+ ...
T Consensus 159 ~l~~~~~-g--~~~~~lVR~f~lg------sq~EgcvvDd~~g~---Lyv~eEd~G--Iw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 159 ELKADKN-G--YISGKKVRAFKMN------SQTEGMAADDEYGR---LYIAEEDEA--IWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp EEEECTT-S--CEEEEEEEEEECS------SCEEEEEEETTTTE---EEEEETTTE--EEEEECSTTSCSCCEEEEEBSS
T ss_pred EEEeCCC-C--cccceEEEEecCC------CCcceEEEcCCCCe---EEEecccce--EEEEeCCcCCCCCceEEEEecC
Confidence 8853110 0 0122356666543 23789999998888 999887754 56543211111111222 222
Q ss_pred ---CCCcceEEEe--ecCCeEEEEEEc--CCeEEEEEecC
Q 037368 179 ---QCSVMGLGFR--VDGQALQLFAVT--PNSVILFSLQN 211 (823)
Q Consensus 179 ---~~~It~l~fs--~dg~~~~l~~~t--~~~V~~~d~~~ 211 (823)
...+.+|+.- ++|+ ..|++++ ++...+|+...
T Consensus 225 g~l~aDvEGLai~~~~~g~-gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 225 RHLTRDIEGLTIYYAADGK-GYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp SSBCSCEEEEEEEECGGGC-EEEEEEEGGGTEEEEEESST
T ss_pred CccccCcceEEEEecCCCC-EEEEEEcCCCCEEEEEECCC
Confidence 3468899884 4443 2466565 45789999863
No 399
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=71.19 E-value=2e+02 Score=35.45 Aligned_cols=63 Identities=11% Similarity=0.070 Sum_probs=38.9
Q ss_pred CCCeEEEeeC--------CCEEEEEec-CCeEEEEc-CCCeeeEeEeec-ccceeEEEEe--cCCCEEEEEecCCC
Q 037368 25 SGNITCCSSG--------RGKVVIGCD-DGAVSLLD-RGLKFNFGFQAH-SSSVLFLQQL--KQRNFLVTVGEDEQ 87 (823)
Q Consensus 25 ~~~is~~~~~--------~~~l~~gs~-dG~i~~~d-~~~~~~~~~~~H-~~~V~~i~~~--~~~~~l~s~s~D~~ 87 (823)
+.+|+|+... ..++++|.. |++|++++ .+.+.+....-- +....+|.+. .+..+|..+-.||.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~ 628 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGA 628 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe
Confidence 4579999875 258899996 99999999 666654222111 1223333332 23456776777875
No 400
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=70.42 E-value=83 Score=30.69 Aligned_cols=103 Identities=14% Similarity=0.102 Sum_probs=56.2
Q ss_pred HHHHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhcc----CCCHHHHHHHHHHHhCCcChHH---HHHHhhc----h
Q 037368 338 DMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYS----KQDYDEAMSQYILTIGHLEPSY---VIQKFLD----A 406 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~----k~~y~~A~~~y~~ti~~~eps~---vI~kFl~----~ 406 (823)
..+...++|+.|++..+..-.+. -...+...|..++. .+++++|...|-+.+..-.+.- .-.-+.. .
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~ 91 (273)
T 1ouv_A 14 AKSYKEKDFTQAKKYFEKACDLK--ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVS 91 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSC
T ss_pred HHHHhCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcc
Confidence 45667789999998776521111 11234445666667 9999999999988754433321 1223333 4
Q ss_pred hhHHHHHHHHHHHHHcCCCChhHHHHHHHHHHh----cCChh
Q 037368 407 QRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTK----LKDVE 444 (823)
Q Consensus 407 ~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~k----l~~~~ 444 (823)
++...=+.|++...+.+ +..-...|-.+|.+ .++.+
T Consensus 92 ~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~ 131 (273)
T 1ouv_A 92 QNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFK 131 (273)
T ss_dssp CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHH
T ss_pred cCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHH
Confidence 44444444444433333 33333345556665 55543
No 401
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=70.11 E-value=3.9 Score=43.96 Aligned_cols=54 Identities=22% Similarity=0.135 Sum_probs=38.0
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCC-HHHHHHHHHHHhC
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQD-YDEAMSQYILTIG 392 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~-y~~A~~~y~~ti~ 392 (823)
..+...++|+.|++..+.. .+.+. -..++...|.-+...|+ |++|+..|-+.+.
T Consensus 105 ~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 105 AVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 4455679999999988762 11221 23455566788888896 9999999988754
No 402
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=70.10 E-value=11 Score=42.60 Aligned_cols=26 Identities=8% Similarity=-0.105 Sum_probs=14.2
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.+...|..++..|+|++|...|-+.+
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al 50 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGL 50 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34444555555566666665555554
No 403
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=69.95 E-value=6 Score=34.51 Aligned_cols=54 Identities=19% Similarity=0.216 Sum_probs=40.2
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
=..++++|+|+.|++.-+.. .+++. -..++...|.-++..|+|++|+..|-+.+
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 35678899999999877652 11211 23566677888999999999999998875
No 404
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=69.70 E-value=20 Score=39.36 Aligned_cols=98 Identities=9% Similarity=0.128 Sum_probs=55.4
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEec---------CCCCcceEEEeec---CCeEEEEEEc
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVD---------NQCSVMGLGFRVD---GQALQLFAVT 200 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~---------~~~~It~l~fs~d---g~~~~l~~~t 200 (823)
.++++|.|||+. +++-...|.|++++.. .+ +...+.. +.+...+|+|+|+ + ..||++.
T Consensus 29 P~~~a~~pdG~l---~V~e~~gg~I~~~~~~----~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~--g~lYv~~ 98 (454)
T 1cru_A 29 PHALLWGPDNQI---WLTERATGKILRVNPE----SG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN--PYIYISG 98 (454)
T ss_dssp EEEEEECTTSCE---EEEETTTCEEEEECTT----TC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS--CEEEEEE
T ss_pred ceEEEEcCCCcE---EEEEcCCCEEEEEECC----CC-cEeEEecCCccccccCCCCceeEEEECCCcCcC--CEEEEEE
Confidence 699999999976 6655433478887531 11 1222111 2345669999985 3 2455553
Q ss_pred C--------------CeEEEEEecCCC----CcceEEc---cC-CCccceecccCCCeEEEe
Q 037368 201 P--------------NSVILFSLQNQP----PKRQFLD---NI-GCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 201 ~--------------~~V~~~d~~~~~----~~~~~l~---~~-~~~~~~~~~s~~~~liv~ 240 (823)
. +.|.-|+.+... ....+++ .. ......++|.|||.+.++
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 2 357777765321 1122232 11 122456889999987764
No 405
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=69.56 E-value=85 Score=30.46 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=23.7
Q ss_pred HHHHHHhhhhccCCCHHHHHHHHHHHhCC
Q 037368 365 EVLRKYGDHLYSKQDYDEAMSQYILTIGH 393 (823)
Q Consensus 365 ~I~~~y~d~L~~k~~y~~A~~~y~~ti~~ 393 (823)
...-..|..++.+|+|++|+..|-+.+..
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~ 44 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTY 44 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 34556688899999999999999988653
No 406
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=68.67 E-value=37 Score=31.69 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=40.2
Q ss_pred HHHHHHhccHHHHHHHHHhcCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+...++|+.|++..+.. +++ ...++...|.-++..|+|++|+..|-+.+
T Consensus 13 g~~~~~~~~~~~A~~~~~~a-~~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al 64 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAV-QDP--HSRICFNIGCMYTILKNMTEAEKAFTRSI 64 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTS-SSC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH-cCC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566789999999988874 232 23567778888999999999999988774
No 407
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.89 E-value=44 Score=28.67 Aligned_cols=56 Identities=21% Similarity=0.177 Sum_probs=41.9
Q ss_pred HHHHHHHhccHHHHHHHHHhc-CC-C-HHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ-QA-D-AAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~-~~-~-~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..+.+.++|+.|++..+.. .. + ......++...|.-++..|+|++|+..|-+.+
T Consensus 34 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 92 (148)
T 2dba_A 34 EGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAI 92 (148)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 345667889999999988762 22 2 22246677788888999999999999988764
No 408
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=67.14 E-value=1.1e+02 Score=30.79 Aligned_cols=249 Identities=13% Similarity=0.023 Sum_probs=128.6
Q ss_pred cCCCCeEEEeeCCCEEEEEecCCeEEEEcC--CCeeeEeEe-ecccceeEEEEecCCCEEEEEecCCCCcccccceeEEE
Q 037368 23 EVSGNITCCSSGRGKVVIGCDDGAVSLLDR--GLKFNFGFQ-AHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKV 99 (823)
Q Consensus 23 ~~~~~is~~~~~~~~l~~gs~dG~i~~~d~--~~~~~~~~~-~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkv 99 (823)
....+|..++.+..+.++-+ ||.|..|-. .+++- .. .-...|.+|+... ...+... ||+ |-.
T Consensus 21 ~~~~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg--~p~~~~~~i~~ia~G~--~hs~~l~-~G~---------v~~ 85 (282)
T 3qhy_B 21 EAQSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLT--MPAATQSGVDAIAAGN--YHSLALK-DGE---------VIA 85 (282)
T ss_dssp GGSSSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTS--CCGGGGSCCCEEEECS--SEEEEEE-TTE---------EEE
T ss_pred cccCCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCC--CCccCCCCEEEEEeCC--CEEEEEE-CCE---------EEE
Confidence 33447877777776654446 999999973 23321 11 1224788888744 3333343 887 889
Q ss_pred EeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEEecCC
Q 037368 100 FDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQ 179 (823)
Q Consensus 100 Wdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~~~~~ 179 (823)
|--...-. .+.|..+ . ..|..|+...+- . +|. . +|.|..|=.. +.+ ..-+-....
T Consensus 86 wG~n~~Gq----lg~P~~~--------~---~~v~~ia~G~~h-s---~al-~-~G~v~~wG~n---~~g-qlg~~~~~~ 140 (282)
T 3qhy_B 86 WGGNEDGQ----TTVPAEA--------R---SGVDAIAAGAWA-S---YAL-K-DGKVIAWGDD---SDG-QTTVPAEAQ 140 (282)
T ss_dssp EECCTTST----TCCCGGG--------S---SSEEEEEEETTE-E---EEE-E-TTEEEEEECC---TTS-TTSCCGGGG
T ss_pred eeCCCCCC----CCCCccc--------C---CCeEEEECcCCE-E---EEE-e-CCeEEEecCC---CCC-cCCCCccCC
Confidence 98664211 1223211 1 238888877652 2 444 4 9999999421 011 000001123
Q ss_pred CCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCcceEEccCCCccceecccCCCeEEEeeCCeEEEEecCCCCcc---
Q 037368 180 CSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPC--- 256 (823)
Q Consensus 180 ~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~~~~l~~~~~~~~~~~~s~~~~liv~~~~~I~i~~~~g~~~~--- 256 (823)
.+|..++-... +.++.. +++|+.|-....++... .......+..++-.....+++ .++.|+.|.....+..
T Consensus 141 ~~i~~i~~G~~---~~~~l~-~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p 214 (282)
T 3qhy_B 141 SGVTALDGGVY---TALAVK-NGGVIAWGDNYFGQTTV-PAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVP 214 (282)
T ss_dssp SSEEEEEECSS---EEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCC
T ss_pred CCeEEEEcccC---EEEEEE-CCEEEEecCCCCCCCCC-ceecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCC
Confidence 45777764332 455555 78899998654432210 000112233333334445666 7789999976544322
Q ss_pred ccccCCeEEEEeeCcEEEEEEecCCCCccEEEEEeCCCCEEEEeccccceeEEEeecCcEEEEEcCCeE
Q 037368 257 WAFEGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKSV 325 (823)
Q Consensus 257 ~~~~g~~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~~~i~~~~~i~~v~~v~~~~~~~~vvs~~~~v 325 (823)
.........++.-..+.++++ + ++|..|--... ....-...+..+.......++++.++..
T Consensus 215 ~~~~~~v~~i~~G~~h~~al~-~-----g~v~~wG~n~~--gq~~v~~~v~~iaaG~~h~~al~~~~~~ 275 (282)
T 3qhy_B 215 TEALSGVSAIASGEWYSLALK-N-----GKVIAWGSSRT--APSSVQSGVSSIEAGPNAAYALKGGSGS 275 (282)
T ss_dssp GGGGSSCCEEEECSSCEEEEE-T-----TEEEEESTTCC--CCGGGSSCEEEEEECSSCEEEEEC----
T ss_pred cccCCCceEEEcCCCEEEEEE-C-----CEEEEecCCCC--ccccCCCCcEEEEECcCeEEEEecCCCC
Confidence 011112345666666666666 5 67888854321 0111122366666666677777766543
No 409
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=66.97 E-value=8.7 Score=45.07 Aligned_cols=144 Identities=12% Similarity=0.143 Sum_probs=83.0
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHHH------HHhhchhhHH-HHHHHHHHHHHcCCCChhHHHHHHHH
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVI------QKFLDAQRIY-NLTNYLEKLHEKGFASKDHTTLLLNC 436 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~vI------~kFl~~~~~~-~L~~YL~~l~~~~~~~~~~~~lLl~~ 436 (823)
.+.+...|.-+.++|+|++|+..|-+.+. ++|.... .-+...++.+ ++..|-..+. ....+.+-..-|-++
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~-l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~-l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALE-VFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR-ISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHH
Confidence 44566678888999999999999998863 3443221 1233444544 4544444443 333344444456668
Q ss_pred HHhcCChh----hHHHhhcCCCCCCcccCCHHHHHHHHHhcCCHHHHHHHHHH----hCChHHH---HHHHHHhhcCHHH
Q 037368 437 YTKLKDVE----KLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKK----AGKHELY---LKILLEDLGRYDE 505 (823)
Q Consensus 437 y~kl~~~~----~l~~fi~~~~~~~~~~~d~~~ai~vl~~~g~~~~a~~la~~----~~~~~~~---l~il~~~~~~~~~ 505 (823)
|.++++.+ .+++-|+..+...+..+++. .++.+.|++++|+...++ ..++..+ +...+...++|++
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg---~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLA---SIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH---HHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHH
Confidence 88887753 34455544431111122222 345678889888887764 3444443 2333344588888
Q ss_pred HHHHHhc
Q 037368 506 ALQYISS 512 (823)
Q Consensus 506 al~yl~~ 512 (823)
|.+++++
T Consensus 164 A~~~~~k 170 (723)
T 4gyw_A 164 YDERMKK 170 (723)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877765
No 410
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=66.82 E-value=48 Score=27.45 Aligned_cols=25 Identities=32% Similarity=0.615 Sum_probs=20.0
Q ss_pred HHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 367 LRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 367 ~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
+...|..++..|+|++|...|-+.+
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~ 28 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKAL 28 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4455777888999999999988764
No 411
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=66.41 E-value=38 Score=35.57 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=58.0
Q ss_pred eEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccccceeEE-------ecCCCCcceEEEeecCC-eEEEEEE----c
Q 037368 133 ITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQ-------VDNQCSVMGLGFRVDGQ-ALQLFAV----T 200 (823)
Q Consensus 133 v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~~k~~~~-------~~~~~~It~l~fs~dg~-~~~l~~~----t 200 (823)
.+.++|.||++. +++-...|.|++++.+ .+ +...+ ..+.+-..+|+|+|+-. ...||++ +
T Consensus 34 P~~ia~~pdG~l---lVter~~G~I~~v~~~----~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 34 PWGLAPLPGGDL---LVSSRDEATITRVDAK----TG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEEEEECTTSCE---EEEETTTCEEEEECTT----TC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred ceEEEEcCCCcE---EEEEecCCEEEEEECC----CC-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 799999999976 6655448999988632 11 11111 22355678999998510 0245554 3
Q ss_pred CCeEEEEEecCC-----C--CcceEEcc----CCCccceecccCCCeEEEe
Q 037368 201 PNSVILFSLQNQ-----P--PKRQFLDN----IGCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 201 ~~~V~~~d~~~~-----~--~~~~~l~~----~~~~~~~~~~s~~~~liv~ 240 (823)
.++|.-|...+. . ....++.. .......+.|.|||.+.++
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 456777777542 1 12223321 1112345789999987765
No 412
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=66.37 E-value=1.8e+02 Score=33.08 Aligned_cols=80 Identities=4% Similarity=-0.141 Sum_probs=45.5
Q ss_pred EEEEec-CCCEEEEEecCCCCcc--cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCc
Q 037368 69 FLQQLK-QRNFLVTVGEDEQVSA--QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPI 145 (823)
Q Consensus 69 ~i~~~~-~~~~l~s~s~D~~~~~--~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~ 145 (823)
++++.+ +|++++.+|.+..... +.....+.+||+.... -..+..+.. ... ..+.++++.+++..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--------w~~~~~~~~---~~~-~~~~~~~~~~~g~l- 256 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--------VSDRTVTVT---KHD-MFCPGISMDGNGQI- 256 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--------BCCCEEEEC---SCC-CSSCEEEECTTSCE-
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--------EEeCcccCC---CCC-CccccccCCCCCCE-
Confidence 566677 8888999887653110 0001137889987431 111112211 010 11456788899888
Q ss_pred ceEEEEEe-CCeEEEEEcc
Q 037368 146 LLIAIGLD-NGCIYCIKGD 163 (823)
Q Consensus 146 ~~ia~G~~-dG~V~l~~~~ 163 (823)
+++|+. ++.+.+|+..
T Consensus 257 --yv~GG~~~~~v~~yd~~ 273 (656)
T 1k3i_A 257 --VVTGGNDAKKTSLYDSS 273 (656)
T ss_dssp --EEECSSSTTCEEEEEGG
T ss_pred --EEeCCCCCCceEEecCc
Confidence 888874 4578888853
No 413
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=65.90 E-value=1.3e+02 Score=31.04 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=39.9
Q ss_pred HHHHHhccHHHHHHHHHhc------CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ------QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~------~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|+...+.. .-+......++...|..++..|+|++|+..|.+.+
T Consensus 55 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 114 (406)
T 3sf4_A 55 NAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHL 114 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4555678888888765531 11234456778888999999999999999988764
No 414
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=65.73 E-value=14 Score=30.59 Aligned_cols=54 Identities=30% Similarity=0.469 Sum_probs=37.2
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+...++|+.|+++.+.. ...+. ...++...|..++..|+|++|...|.+.+
T Consensus 16 ~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 70 (125)
T 1na0_A 16 GNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 35566789999998877652 11111 13456667888888999999999887764
No 415
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=65.32 E-value=9.6 Score=32.60 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=37.5
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+++.++|+.|+...+.. .+.+. -..++...|.-++..|+|++|+..|-+.+
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al 65 (126)
T 3upv_A 11 GKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 35567888899988877652 11111 13566667888888899999998888765
No 416
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=64.60 E-value=10 Score=44.05 Aligned_cols=52 Identities=8% Similarity=-0.111 Sum_probs=36.5
Q ss_pred HHHhccHHHHHHHHHhc---------CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 340 LFKKNLYTVAINLVQSQ---------QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 340 L~~~~~f~~Al~la~~~---------~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
.+..++|+.|++..+.. ...+. -...+...|.-++..|+|++|+..|-+.+.
T Consensus 401 a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~ 461 (681)
T 2pzi_A 401 ATVLSQPVQTLDSLRAARHGALDADGVDFSE-SVELPLMEVRALLDLGDVAKATRKLDDLAE 461 (681)
T ss_dssp HTTTCCHHHHHHHHHHHHTC-------CCTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhhhhccccccccccc-chhHHHHHHHHHHhcCCHHHHHHHHHHHhc
Confidence 35678999998877653 12111 234566678888899999999999887753
No 417
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=64.46 E-value=18 Score=30.72 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=41.9
Q ss_pred HHHHHHHHhccHHHHHHHHHhc--CCC-HHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ--QAD-AAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~--~~~-~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..-..+++.++|+.|++..+.. ..| .......+...|.-++..|+|++|+..|-+.+.
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3456778899999999887752 112 112335666778889999999999999988754
No 418
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=64.35 E-value=1.2e+02 Score=30.36 Aligned_cols=70 Identities=11% Similarity=0.128 Sum_probs=36.7
Q ss_pred cCCHHHHHHHHHH----hCChHHH----HHHHHHhhcCHHHHHHHHhcC------ChHHHHHHHHHHHHHHHhc-CCHHH
Q 037368 473 ANYHEHAMYVAKK----AGKHELY----LKILLEDLGRYDEALQYISSL------DPSQAGVTVKEYGKILIEH-KPMET 537 (823)
Q Consensus 473 ~g~~~~a~~la~~----~~~~~~~----l~il~~~~~~~~~al~yl~~l------~~~~~~~~i~k~~~~Ll~~-~p~~~ 537 (823)
.|.+++|....++ .+.+..+ ..++.. .|++++|..++.+. +++....+...|+..+... +++++
T Consensus 182 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a 260 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH-LNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASI 260 (308)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4666666655543 2333332 233333 48899998887652 3323445566666544433 34555
Q ss_pred HHHHHH
Q 037368 538 IDILLR 543 (823)
Q Consensus 538 ~~ll~~ 543 (823)
..++.+
T Consensus 261 ~~~~~~ 266 (308)
T 2ond_A 261 LKVEKR 266 (308)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 419
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=63.71 E-value=1.5e+02 Score=31.03 Aligned_cols=153 Identities=14% Similarity=0.126 Sum_probs=74.8
Q ss_pred cceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEE-eccCCCCCCceEEEEEecCCC
Q 037368 65 SSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILR-VFTSQFPEAKITSFLVLEEAP 143 (823)
Q Consensus 65 ~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~v~~va~~~d~~ 143 (823)
..-+.|+|.|+|.+++|--..|. |++++.... ....+..+. ++. ..+.....||++||+.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~---------I~~v~~~~g--------~~~~v~~~~~v~~--~g~~GllGia~~Pdf~ 92 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEAT---------ITRVDAKTG--------RKTELGEVPGVSP--SGEGGLLGIALSPDYA 92 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCE---------EEEECTTTC--------CEEEEEECTTCCC--BTTBSEEEEEECTTHH
T ss_pred CCceEEEEcCCCcEEEEEecCCE---------EEEEECCCC--------cEeeecccCceee--cCCCCceeeEeccccc
Confidence 45678999999998888765676 887765421 111111110 110 0013379999999732
Q ss_pred CcceEEEEE---eCCeEEEEEccccc---ccccceeEEec-----CCCCcceEEEeecCCeEEEEEEcC-----------
Q 037368 144 PILLIAIGL---DNGCIYCIKGDIAR---ERITRFKLQVD-----NQCSVMGLGFRVDGQALQLFAVTP----------- 201 (823)
Q Consensus 144 ~~~~ia~G~---~dG~V~l~~~~~~~---~~~~k~~~~~~-----~~~~It~l~fs~dg~~~~l~~~t~----------- 201 (823)
....+-+.. .++.|.-|+.+-.. ..-...++++. ....-..|.|.+|| .|+++..
T Consensus 93 ~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG---~Lyvt~Gd~~~~~~~qd~ 169 (347)
T 3das_A 93 SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK---MLYAGTGESGDTGLSQDR 169 (347)
T ss_dssp HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS---CEEEECBCTTCGGGTTCT
T ss_pred cCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC---CEEEEECCCCCCccccCC
Confidence 101133322 23344444321000 01112233321 12345579999998 3666531
Q ss_pred ----CeEEEEEecCCCC------cceEEc-cCCCccceecccCCCeEEEe
Q 037368 202 ----NSVILFSLQNQPP------KRQFLD-NIGCSTNSVAMSDRLELIIG 240 (823)
Q Consensus 202 ----~~V~~~d~~~~~~------~~~~l~-~~~~~~~~~~~s~~~~liv~ 240 (823)
++|.-++.+++.. ...++. ++. .+..++|.|+|.+.++
T Consensus 170 ~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 170 KSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 3455555544310 012222 222 2345788888887664
No 420
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=63.43 E-value=28 Score=32.41 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=39.3
Q ss_pred HHHHHhccHHHHHHHHHhc-CC-C--H------------HHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QA-D--A------------AATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~-~--~------------~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..++..++|+.|++..+.. .+ + + .....++...|.-++..|+|++|...|-+.+.
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 46 NEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4556789999999877652 11 1 1 00126677788889999999999999988754
No 421
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=63.31 E-value=3.6 Score=32.71 Aligned_cols=53 Identities=30% Similarity=0.506 Sum_probs=35.8
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|++..+.. ...+. ...++...|..++..|+|++|...|.+.+
T Consensus 17 ~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 70 (91)
T 1na3_A 17 NAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70 (91)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4556778888888877652 11111 13456667888888899999998887764
No 422
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=62.88 E-value=49 Score=31.21 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=39.2
Q ss_pred HHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHH----------------HhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRK----------------YGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~----------------y~d~L~~k~~y~~A~~~y~~ti 391 (823)
+-..+++.++|+.|+...+.. ..++.. ...+.. .|.-++..|+|++|+..|-+.+
T Consensus 10 ~g~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 10 KVSAAIEAGQNGQAVSYFRQTIALNIDR-TEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCHHH-HHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCC-hHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 345667889999999987762 233432 233333 7888899999999999998875
No 423
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=62.29 E-value=7.4 Score=34.47 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=33.2
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+++.++|+.|+...+.. ..++. -...+...|.-++..|+|++|+..|-+.+
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al 79 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGA 79 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4456678888888776652 11111 12345556777778888888888877764
No 424
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=61.19 E-value=25 Score=38.66 Aligned_cols=54 Identities=15% Similarity=0.055 Sum_probs=41.9
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccC---------CCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSK---------QDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k---------~~y~~A~~~y~~ti~ 392 (823)
-..+.+.++|++|++..+.. .+.+. ...+...|.-++.. |+|++|+..|-+.+.
T Consensus 144 g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 207 (474)
T 4abn_A 144 GEVYWKKGDVTSAHTCFSGALTHCKN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 207 (474)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTCCC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH
Confidence 35666789999999988762 33333 37777888888998 999999999988753
No 425
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=60.93 E-value=1.4e+02 Score=29.78 Aligned_cols=71 Identities=17% Similarity=0.073 Sum_probs=35.6
Q ss_pred eEEEeeCCCEEEEEecC-----CeEEEEcC-C-----CeeeEeEeecccceeEEEEecCCCEEEEEecCCCCccccccee
Q 037368 28 ITCCSSGRGKVVIGCDD-----GAVSLLDR-G-----LKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 28 is~~~~~~~~l~~gs~d-----G~i~~~d~-~-----~~~~~~~~~H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
-+++..++..+++|+.+ ..+.+||. + ++.+..+......-..+. -++.+++.+|.++......
T Consensus 56 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~---- 129 (301)
T 2vpj_A 56 VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTS---- 129 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCE----
T ss_pred ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccce----
Confidence 34454555566788755 35888883 2 222211111111111122 2677778887765421111
Q ss_pred EEEEeCCC
Q 037368 97 LKVFDLDK 104 (823)
Q Consensus 97 vkvWdl~~ 104 (823)
+-++|+.+
T Consensus 130 ~~~~d~~~ 137 (301)
T 2vpj_A 130 MERYDPNI 137 (301)
T ss_dssp EEEEETTT
T ss_pred EEEEcCCC
Confidence 66777763
No 426
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=60.91 E-value=69 Score=31.31 Aligned_cols=105 Identities=9% Similarity=0.014 Sum_probs=59.6
Q ss_pred CeEEEeeC-CCEEEEEecCCeEEEEcC-CCeeeEeEeecccce--------eEEEEecCCCEEEEEecCCCCccccccee
Q 037368 27 NITCCSSG-RGKVVIGCDDGAVSLLDR-GLKFNFGFQAHSSSV--------LFLQQLKQRNFLVTVGEDEQVSAQQSAVC 96 (823)
Q Consensus 27 ~is~~~~~-~~~l~~gs~dG~i~~~d~-~~~~~~~~~~H~~~V--------~~i~~~~~~~~l~s~s~D~~~~~~~~~~~ 96 (823)
++++++++ ++.|... .+|.++-.+. +... ..|-+-...| ..+.|+|+|.+-++ .||.
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~--------- 108 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK--------- 108 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTE---------
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCc-ccccccccEecccccccceEEEECCCCCEEEe--CCCE---------
Confidence 57778876 4667555 8888877773 3221 1232223334 78999999988777 4575
Q ss_pred EEEEeCCCCCCCCCCCCCCceEE-EEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEE
Q 037368 97 LKVFDLDKMEPEGTSSTSPDCIG-ILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIY 158 (823)
Q Consensus 97 vkvWdl~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~ 158 (823)
|.=|+--... .-.-+. ...+..... ..+.+|.++|+|.. .|+. ||.++
T Consensus 109 iyr~~pP~~~-------~~~Wl~~a~~vg~~gw--~~~~~lff~p~G~L---yav~--dg~ly 157 (236)
T 1tl2_A 109 LYKASPPQSD-------TDNWIARATEVGSGGW--SGFKFLFFHPNGYL---YAVH--GQQFY 157 (236)
T ss_dssp EEEESCCCST-------TCCHHHHSEEEECSSG--GGEEEEEECTTSCE---EEEE--TTEEE
T ss_pred EEEeCCCcCC-------CCceeccccEeccCCC--CceEEEEECCCceE---EEEe--CCcEE
Confidence 5444432110 100000 001111000 23899999999988 8877 88844
No 427
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=60.30 E-value=1.9e+02 Score=31.33 Aligned_cols=158 Identities=12% Similarity=0.115 Sum_probs=81.0
Q ss_pred CCCEEEEEecCCeEEEEcC--CCeeeEeEeecc----cceeEEEEecCCCEEEEEec---CCCCcccccceeEEEEeCCC
Q 037368 34 GRGKVVIGCDDGAVSLLDR--GLKFNFGFQAHS----SSVLFLQQLKQRNFLVTVGE---DEQVSAQQSAVCLKVFDLDK 104 (823)
Q Consensus 34 ~~~~l~~gs~dG~i~~~d~--~~~~~~~~~~H~----~~V~~i~~~~~~~~l~s~s~---D~~~~~~~~~~~vkvWdl~~ 104 (823)
++..|+.-| +..|+.|+- +..+.+.|.-|. ..|..-..+++.++++-+|- ++... .. +.+|+.++
T Consensus 115 s~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~-G~----mQLYS~er 188 (494)
T 1bpo_A 115 SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVV-GA----MQLYSVDR 188 (494)
T ss_dssp ETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEE-EE----EEEEESTT
T ss_pred CCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCccc-ce----EEEeeccc
Confidence 345555544 557999994 446888898774 46888888999999876553 33211 11 88999886
Q ss_pred CCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcccccccc----cceeEE-ecC-
Q 037368 105 MEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERI----TRFKLQ-VDN- 178 (823)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~~~~~~~----~k~~~~-~~~- 178 (823)
.... ...|.--+-.++++.+...| ..-++|...... .|++++.+.+--.... .|..-+ +..
T Consensus 189 ~~sQ-~ieGhaa~F~~~~~~g~~~~---~~lf~fa~r~~~---------g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe 255 (494)
T 1bpo_A 189 KVSQ-PIEGHAASFAQFKMEGNAEE---STLFCFAVRGQA---------GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (494)
T ss_dssp CCEE-EECCSEEEEEEEECTTCSSE---EEEEEEEECSTT---------CCEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred cccc-hheeeeeeeEEEecCCCCCC---ceEEEEEEecCC---------CcEEEEEEcCCCccCCCCccceeeeeeCCcc
Confidence 4200 00000001112222222222 222333322212 4788888753110011 111112 221
Q ss_pred --CCCcceEEEeecCCeEEEEEEcCCe-EEEEEecCC
Q 037368 179 --QCSVMGLGFRVDGQALQLFAVTPNS-VILFSLQNQ 212 (823)
Q Consensus 179 --~~~It~l~fs~dg~~~~l~~~t~~~-V~~~d~~~~ 212 (823)
.+--.++..++.- .++|+.|..+ +.+||+.+.
T Consensus 256 ~~~DFPvamqvs~ky--gviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 256 AQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp STTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTC
T ss_pred cccCceeEEEecccC--CEEEEEecCceEEEEecccc
Confidence 2222356666543 4788888776 899999764
No 428
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=59.64 E-value=1.4e+02 Score=29.55 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=20.4
Q ss_pred HHhhhhccCCCHHHHHHHHHHHhC
Q 037368 369 KYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 369 ~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..+..++.+|+|++|...|-+.+.
T Consensus 80 ~~i~~~~~~~~y~~a~~~~~~~l~ 103 (293)
T 3u3w_A 80 DQVIMLCKQKRYKEIYNKVWNELK 103 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhc
Confidence 447889999999999999988755
No 429
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=59.63 E-value=49 Score=27.79 Aligned_cols=29 Identities=31% Similarity=0.460 Sum_probs=24.2
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
...+...|..++.+|+|++|+..|-+.+.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIK 32 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 35567779999999999999999988753
No 430
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=59.04 E-value=9.6 Score=34.55 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=39.8
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+++.++|+.|++..+.. .+.+. ...++...|.-++..|+|++|+..|-+.+.
T Consensus 18 g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 18 GNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45667889999999877652 11111 245667778889999999999999988753
No 431
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=58.67 E-value=87 Score=26.80 Aligned_cols=52 Identities=15% Similarity=0.146 Sum_probs=33.6
Q ss_pred HHHHhccHHHHHHHHHhc------CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 339 MLFKKNLYTVAINLVQSQ------QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~~------~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
.+...++|+.|++..+.. .-+......++...|..++..|+|++|...|-+.
T Consensus 18 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 75 (164)
T 3ro3_A 18 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKT 75 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444567777777665541 1123334456667788888888888888887765
No 432
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=58.38 E-value=29 Score=38.96 Aligned_cols=102 Identities=18% Similarity=0.067 Sum_probs=59.7
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH------HHHhhchhhH
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV------IQKFLDAQRI 409 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v------I~kFl~~~~~ 409 (823)
-..+.+.++|++|++..+.. .+.+. ....+...|.-++..|+|++|...|-+.+. .+|... -.-+...++.
T Consensus 30 g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~la~~~~~~g~~ 107 (568)
T 2vsy_A 30 ADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASD-AAPEHPGIALWLGHALEDAGQA 107 (568)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHcCCH
Confidence 35666789999999988762 33222 245677788899999999999999988753 233211 1122233444
Q ss_pred HHHHHHHHHHHHcCCCChhHHHHHHHHHHhc
Q 037368 410 YNLTNYLEKLHEKGFASKDHTTLLLNCYTKL 440 (823)
Q Consensus 410 ~~L~~YL~~l~~~~~~~~~~~~lLl~~y~kl 440 (823)
+.=..++++..+....+..-...|..+|.++
T Consensus 108 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 108 EAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 4333444443333333333334455566665
No 433
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=58.35 E-value=6.3 Score=33.54 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=18.6
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
...++...|.-++..|+|++|+..|-+.+
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al 54 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGV 54 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44555566666667777777777666654
No 434
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=57.87 E-value=4.6 Score=33.46 Aligned_cols=54 Identities=19% Similarity=0.234 Sum_probs=37.6
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..+...++|+.|++..+.. .+.+. -..++...|.-++..|+|++|+..|-+.+.
T Consensus 12 ~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 12 NSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4566778899888877652 11111 134566778888889999999998888764
No 435
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=57.82 E-value=46 Score=35.14 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=40.6
Q ss_pred HHHHHHhccHHHHHHHHHhcCC----------------CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQQA----------------DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~~~----------------~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..++++++|+.|++.-++.-. .......++...|.-++..|+|++|+..|-+.+.
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 3456678899999886654210 1122456677788889999999999999998865
No 436
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=57.66 E-value=7.5 Score=35.71 Aligned_cols=50 Identities=12% Similarity=0.227 Sum_probs=30.6
Q ss_pred HHHhccHHHHHHHHHhc-C-CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 340 LFKKNLYTVAINLVQSQ-Q-ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 340 L~~~~~f~~Al~la~~~-~-~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
+...++|+.|+...+.. . -|. -..++...|..++..|+|++|+..|-+.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~~~~~~A~~~~~~al 71 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQ--NSEQWALLGEYYLWQNDYSNSLLAYRQAL 71 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCS--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34556676666655441 0 111 13567778888999999999999998874
No 437
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=57.28 E-value=1.9e+02 Score=31.25 Aligned_cols=56 Identities=4% Similarity=-0.067 Sum_probs=34.6
Q ss_pred EEEee-CCCEEEEEecCC-eEEEEcC-CCeee--EeEee------cccceeEEEEec----CCCEEEEEec
Q 037368 29 TCCSS-GRGKVVIGCDDG-AVSLLDR-GLKFN--FGFQA------HSSSVLFLQQLK----QRNFLVTVGE 84 (823)
Q Consensus 29 s~~~~-~~~~l~~gs~dG-~i~~~d~-~~~~~--~~~~~------H~~~V~~i~~~~----~~~~l~s~s~ 84 (823)
..+++ +++.|+++...| .|++++. +++.. ..+.. -.+....|+++| ++.+.++-+.
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 44554 667888888886 6999983 45432 12211 135677999999 4555566553
No 438
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.21 E-value=58 Score=27.08 Aligned_cols=30 Identities=30% Similarity=0.552 Sum_probs=24.2
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhCC
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIGH 393 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~ 393 (823)
..-+...|..++..|+|++|+..|-+.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 45 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKR 45 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 344556788899999999999999988653
No 439
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=56.50 E-value=27 Score=28.42 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=37.5
Q ss_pred HHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 336 KLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 336 ~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
.-..+...++|+.|+...+.. ...+. -..++...|..++..|+|++|...|-+.+
T Consensus 10 ~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 10 KGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 345667788999998877652 11111 13456667778888899999998887764
No 440
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=56.42 E-value=13 Score=39.66 Aligned_cols=56 Identities=7% Similarity=-0.001 Sum_probs=39.1
Q ss_pred HHHHHHHhcc-HHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 336 KLDMLFKKNL-YTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 336 ~i~~L~~~~~-f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
+-..|...++ |++|+...++. .+++. -..++...|.-+...|+|++|+..|-+.+.
T Consensus 137 ~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 137 RRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3455667786 99999988762 11111 234555667778888999999999988753
No 441
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=56.38 E-value=13 Score=38.85 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=40.3
Q ss_pred HHHHHHhccHHHHHHHHHhc-CC-CH-------------HHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QA-DA-------------AATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~-~~-------------~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
=..+.+.++|+.|+...++. .+ +. .....++...|.-++..|+|++|+..|-+.+.
T Consensus 154 g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 154 GTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34566789999999877652 11 11 11246777789999999999999999988753
No 442
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=56.12 E-value=64 Score=28.20 Aligned_cols=12 Identities=8% Similarity=0.105 Sum_probs=9.4
Q ss_pred cCHHHHHHHHhc
Q 037368 501 GRYDEALQYISS 512 (823)
Q Consensus 501 ~~~~~al~yl~~ 512 (823)
+++++|+++..+
T Consensus 131 ~~~~~A~~~~~~ 142 (166)
T 1a17_A 131 KAFERAIAGDEH 142 (166)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHcccc
Confidence 788888887765
No 443
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=55.95 E-value=15 Score=31.26 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=19.8
Q ss_pred HHhhhhccCCCHHHHHHHHHHHhC
Q 037368 369 KYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 369 ~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..|..++..|+|++|+..|-+.+.
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~ 30 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLE 30 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 457778899999999999988754
No 444
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=55.76 E-value=24 Score=29.50 Aligned_cols=49 Identities=14% Similarity=0.242 Sum_probs=23.8
Q ss_pred HHHHHhccHHHHHHHHHhc----CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ----QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~----~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
..+...++|+.|+...+.. .........+...| +..|+|++|+..|-+.
T Consensus 12 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~----~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 12 NDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVY----FEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH----HHHTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHH----HHhccHHHHHHHHHHH
Confidence 3445566666666655431 11122223333322 2356666666666554
No 445
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=55.20 E-value=19 Score=32.25 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=23.5
Q ss_pred HHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 339 MLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
.+++.++|++|+...+.. ..++. -...+...|.-++..|+|++|+..|-+.
T Consensus 30 ~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 30 NQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344555666665554431 01110 1223334455555566666666655554
No 446
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=55.03 E-value=16 Score=30.60 Aligned_cols=51 Identities=12% Similarity=0.138 Sum_probs=26.2
Q ss_pred HHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 339 MLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
.+...++|+.|++..+.. .+++. ....+...|.-++..|++++|...|-+.
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344556666666655541 11111 1223444566666666666666666554
No 447
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=54.99 E-value=24 Score=35.56 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=33.7
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
..+++.++++.|+.+.+.. ..++. -...+...|.-+...|++++|...|-+.
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 4456678888888776652 11111 1345566677788888888888887765
No 448
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=54.99 E-value=77 Score=29.34 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=20.0
Q ss_pred HHhhhhccCCCHHHHHHHHHHHh
Q 037368 369 KYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 369 ~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..|..++.+|+|++|+..|-+.+
T Consensus 11 ~~g~~~~~~~~~~~A~~~~~~a~ 33 (213)
T 1hh8_A 11 NEGVLAADKKDWKGALDAFSAVQ 33 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHc
Confidence 45888899999999999998875
No 449
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=54.73 E-value=1.7e+02 Score=28.94 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=40.8
Q ss_pred HHHHHHHHHhccHHHHHHHHHhc----CCCHH--HHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 334 ESKLDMLFKKNLYTVAINLVQSQ----QADAA--ATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 334 ~~~i~~L~~~~~f~~Al~la~~~----~~~~~--~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..++..++..++|+.|++..+.. ...+. .....+...|..+..+|+|++|...|-+.+.
T Consensus 79 ~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 143 (293)
T 2qfc_A 79 KDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN 143 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 35567778899999999887641 11121 1223334467778899999999999988764
No 450
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=54.54 E-value=40 Score=30.10 Aligned_cols=30 Identities=33% Similarity=0.658 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
....++..|+.+|.+|+|++|+..|-+.+.
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~ 39 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALT 39 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345667789999999999999999988754
No 451
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=54.19 E-value=4.3 Score=33.41 Aligned_cols=54 Identities=26% Similarity=0.388 Sum_probs=35.8
Q ss_pred HHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+...++|+.|+...+.. ...+. ...++...|..++..|+|++|...|-+.+
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45566778888888877652 11110 13455667888888888999888887764
No 452
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=54.00 E-value=5.6 Score=36.28 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=40.3
Q ss_pred HHHHHHhhhhccCCCHHHHHHHHHHHhCCcCh---HHHH---HHhhchhhH-HHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 037368 365 EVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP---SYVI---QKFLDAQRI-YNLTNYLEKLHEKGFASKDHTTLLLNCY 437 (823)
Q Consensus 365 ~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~ep---s~vI---~kFl~~~~~-~~L~~YL~~l~~~~~~~~~~~~lLl~~y 437 (823)
..+...|..++..|+|++|+..|-+.+. ++| ..+. .-+...++. +++..|-..+. ....+..-..-+-.||
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~-~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~-l~P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCI-YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA-LGKNDYTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh-hCCCCcHHHHHHHHHH
Confidence 3455567788888888888888877643 333 2221 112223333 34554544443 2223333333455566
Q ss_pred HhcCCh
Q 037368 438 TKLKDV 443 (823)
Q Consensus 438 ~kl~~~ 443 (823)
.++++.
T Consensus 115 ~~lg~~ 120 (151)
T 3gyz_A 115 LRLKAP 120 (151)
T ss_dssp HHTTCH
T ss_pred HHcCCH
Confidence 666553
No 453
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=53.52 E-value=41 Score=26.98 Aligned_cols=26 Identities=19% Similarity=0.264 Sum_probs=21.1
Q ss_pred HHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 367 LRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 367 ~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
+...|..++.+|+|++|+..|-+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 44567778899999999999988753
No 454
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=53.41 E-value=37 Score=32.05 Aligned_cols=27 Identities=19% Similarity=0.112 Sum_probs=18.5
Q ss_pred HHhhhhccCCCHHHHHHHHHHHhCCcCh
Q 037368 369 KYGDHLYSKQDYDEAMSQYILTIGHLEP 396 (823)
Q Consensus 369 ~y~d~L~~k~~y~~A~~~y~~ti~~~ep 396 (823)
..|.-++.+|+|++|+..|-+.+. .+|
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~al~-~~p 35 (208)
T 3urz_A 9 QKVSAAIEAGQNGQAVSYFRQTIA-LNI 35 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH-HCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH-hCC
Confidence 346667778888888888777653 344
No 455
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=53.03 E-value=1.7e+02 Score=28.36 Aligned_cols=173 Identities=13% Similarity=0.109 Sum_probs=83.3
Q ss_pred HHHHHhhhhccCCCHHHHHHHHHHHhCCcChHH---HHHHhhc----hhhHHHHHHHHHHHHHcCCCChhHHHHHHHHHH
Q 037368 366 VLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSY---VIQKFLD----AQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYT 438 (823)
Q Consensus 366 I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~---vI~kFl~----~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y~ 438 (823)
.+...|..++..|+|++|+..|.+.+..-.+.- .-.-+.. .++.+.=..|+....+.+ +..-...|-.+|.
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~ 85 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYY 85 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh
Confidence 345568888899999999999988865333211 1112233 344444444444433333 3333344555666
Q ss_pred h----cCChhhHHHhhc----CCCCCCcccCCHHHHHHHHHh----cCCHHHHHHHHHH---hCChHHH--HHHHHHh--
Q 037368 439 K----LKDVEKLNMFIK----GEDGVGEHKFDVETAIRVCRA----ANYHEHAMYVAKK---AGKHELY--LKILLED-- 499 (823)
Q Consensus 439 k----l~~~~~l~~fi~----~~~~~~~~~~d~~~ai~vl~~----~g~~~~a~~la~~---~~~~~~~--l~il~~~-- 499 (823)
. .++.++-.++++ ... ....+.+. .++.. .|.+++|+.+.++ .+....+ +..+...
T Consensus 86 ~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~lg---~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~ 160 (273)
T 1ouv_A 86 SGQGVSQNTNKALQYYSKACDLKY--AEGCASLG---GIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 160 (273)
T ss_dssp HTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHH---HHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred CCCCcccCHHHHHHHHHHHHHcCC--ccHHHHHH---HHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCC
Confidence 6 666443222222 110 00011111 12334 5666666655553 2222211 2233333
Q ss_pred --hcCHHHHHHHHhcCChHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHh
Q 037368 500 --LGRYDEALQYISSLDPSQAGVTVKEYGKILIE-----HKPMETIDILLRLC 545 (823)
Q Consensus 500 --~~~~~~al~yl~~l~~~~~~~~i~k~~~~Ll~-----~~p~~~~~ll~~~~ 545 (823)
.+++++|++++++.-...........|..+.. .+++++++.+.+.+
T Consensus 161 ~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~ 213 (273)
T 1ouv_A 161 GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKAC 213 (273)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHH
Confidence 47888888888762111111233444443333 45666666665543
No 456
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=52.73 E-value=6.5 Score=34.26 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=16.9
Q ss_pred HHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 367 LRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 367 ~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
++.-|+-+|.+|+|++|+..|-+.+
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al 35 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAI 35 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4455666777777777777776664
No 457
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=52.15 E-value=79 Score=29.83 Aligned_cols=60 Identities=10% Similarity=0.021 Sum_probs=41.9
Q ss_pred HHHHHHhccHHHHHHHHHhc-C-CCHH-----HHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChH
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-Q-ADAA-----ATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPS 397 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~-~~~~-----~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps 397 (823)
-..+...++|+.|++..+.. . .|.. .+..++...|..++..|+|++|+..|-+.+. .+|.
T Consensus 83 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~~p~ 149 (228)
T 4i17_A 83 SAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD-VTSK 149 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-SSCH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh-cCCC
Confidence 34566778999998877652 1 1211 1335677778888999999999999998864 4565
No 458
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=51.12 E-value=2e+02 Score=28.72 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=10.6
Q ss_pred hhcCHHHHHHHHhc
Q 037368 499 DLGRYDEALQYISS 512 (823)
Q Consensus 499 ~~~~~~~al~yl~~ 512 (823)
..++|++|+.++.+
T Consensus 167 ~~g~~~~A~~~~~~ 180 (307)
T 2ifu_A 167 RQQKFDEAAASLQK 180 (307)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHH
Confidence 34888888888775
No 459
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=51.11 E-value=71 Score=28.39 Aligned_cols=30 Identities=17% Similarity=0.483 Sum_probs=25.1
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
....+...|..++.+|+|++|+..|-+.+.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456677789999999999999999988753
No 460
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=51.04 E-value=13 Score=34.87 Aligned_cols=30 Identities=20% Similarity=0.457 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
....+...|..++.+|+|++|+..|.+.+.
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 66 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALD 66 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345566779999999999999999998764
No 461
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=50.97 E-value=2.3e+02 Score=29.33 Aligned_cols=112 Identities=6% Similarity=-0.044 Sum_probs=67.5
Q ss_pred eEEEee----CCCEEEEEec--------------CCeEEEEc-C---CCeeeEeEe--ecc-----------cceeEEEE
Q 037368 28 ITCCSS----GRGKVVIGCD--------------DGAVSLLD-R---GLKFNFGFQ--AHS-----------SSVLFLQQ 72 (823)
Q Consensus 28 is~~~~----~~~~l~~gs~--------------dG~i~~~d-~---~~~~~~~~~--~H~-----------~~V~~i~~ 72 (823)
++.+.. +++.|++... +..|..+| . +++.+.... +.. ...+.|.+
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 477777 4566654333 57799999 5 477654333 222 24889999
Q ss_pred ecCCCEEEEEecC-CCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEecc-CCCCCCceEEEEEecCCCCcceEEE
Q 037368 73 LKQRNFLVTVGED-EQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFT-SQFPEAKITSFLVLEEAPPILLIAI 150 (823)
Q Consensus 73 ~~~~~~l~s~s~D-~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~v~~va~~~d~~~~~~ia~ 150 (823)
+++|+.-+|.+.- +. |-..+.+. . .+..+.... ........+.++++||+.. +++
T Consensus 145 D~~GnaYVt~s~~~~~---------I~rV~pdG---------~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~---Liv 201 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPA---------IARVSADG---------K--TVSTFAWESGNGGQRPGYSGITFDPHSNK---LIA 201 (334)
T ss_dssp CTTSCEEEEEEESSCE---------EEEECTTS---------C--CEEEEEECCCCSSSCCSCSEEEEETTTTE---EEE
T ss_pred CCCCCEEEeCCCCCCe---------EEEEeCCC---------C--EEeeeeecCCCcccccCcceEEEeCCCCE---EEE
Confidence 9999999998876 53 33333331 1 111211110 0000012678999999987 776
Q ss_pred EEeCCeEEEEEc
Q 037368 151 GLDNGCIYCIKG 162 (823)
Q Consensus 151 G~~dG~V~l~~~ 162 (823)
...+|.+.-++.
T Consensus 202 ~~~~g~L~~fD~ 213 (334)
T 2p9w_A 202 FGGPRALTAFDV 213 (334)
T ss_dssp ESSSSSEEEEEC
T ss_pred EcCCCeEEEEcC
Confidence 655888887764
No 462
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=50.48 E-value=2.5e+02 Score=29.66 Aligned_cols=277 Identities=10% Similarity=0.074 Sum_probs=134.6
Q ss_pred CCCeEEEeeCCCEEEEEecCCeEEEEcC--CCee-----e-----EeEeec-ccceeEEEEecCCCEEEEEecCC-CCcc
Q 037368 25 SGNITCCSSGRGKVVIGCDDGAVSLLDR--GLKF-----N-----FGFQAH-SSSVLFLQQLKQRNFLVTVGEDE-QVSA 90 (823)
Q Consensus 25 ~~~is~~~~~~~~l~~gs~dG~i~~~d~--~~~~-----~-----~~~~~H-~~~V~~i~~~~~~~~l~s~s~D~-~~~~ 90 (823)
+.+|..++++..+.+.=+.+|.|..|-. .|++ . .....- ...|..|+. .+...+....|+ .
T Consensus 15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~--G~~ht~al~~~gg~--- 89 (406)
T 4d9s_A 15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC--GADHTVAYSQSGME--- 89 (406)
T ss_dssp CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTTTE---
T ss_pred ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEe--CcceEEEEECCCCE---
Confidence 4568888888888777788999999962 2221 0 011111 135777776 344555555654 5
Q ss_pred cccceeEEEEeCCCCCCCCCCCCCCceEEEEEeccCCCCCCceEEEEEecCCCCcceEEEEEeCCeEEEEEcc----ccc
Q 037368 91 QQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGD----IAR 166 (823)
Q Consensus 91 ~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~va~~~d~~~~~~ia~G~~dG~V~l~~~~----~~~ 166 (823)
|..|-....-.-+..... .......+.. ..+..|..|+.... . .++-..+|.|..|-.. +-.
T Consensus 90 ------v~~wG~n~~GqLG~g~~~-~~~~p~~v~~--l~~~~i~~ia~G~~--h---~~alt~~G~v~~wG~n~~GqLG~ 155 (406)
T 4d9s_A 90 ------VYSWGWGDFGRLGHGNSS-DLFTPLPIKA--LHGIRIKQIACGDS--H---CLAVTMEGEVQSWGRNQNGQLGL 155 (406)
T ss_dssp ------EEEEECCGGGTTCSSSCC-CEEEEEECGG--GTTCCEEEEEECSS--E---EEEEETTSCEEEEECCTTSTTCS
T ss_pred ------EEEEcCCCCcCCCCCCCC-ccccceEecc--cCCCCEEEEEEChh--h---eEEEcCCCcEEEeCCCCCccCCC
Confidence 888875432110000001 1111111111 11123777776543 3 3333669999999321 100
Q ss_pred ccc---cceeEEec-CCCCcceEEEeecCCeEEEEEEcCCeEEEEEecCCCCc------ce----EEc-cCCCccceecc
Q 037368 167 ERI---TRFKLQVD-NQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPK------RQ----FLD-NIGCSTNSVAM 231 (823)
Q Consensus 167 ~~~---~k~~~~~~-~~~~It~l~fs~dg~~~~l~~~t~~~V~~~d~~~~~~~------~~----~l~-~~~~~~~~~~~ 231 (823)
... ..+..+.. ....|..++-... +.++.+.++.|+.|-....++. .. .+. ..+..+..++.
T Consensus 156 g~~~~~~~p~~v~~~~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~ 232 (406)
T 4d9s_A 156 GDTEDSLVPQKIQAFEGIRIKMVAAGAE---HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC 232 (406)
T ss_dssp SSCCCEEEEEECGGGTTCCEEEEEECSS---EEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE
T ss_pred CCCCCcccceEecccCCCcEEEEecCCC---eEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE
Confidence 000 01111111 1335777664332 5777788888999975433211 00 010 01112222222
Q ss_pred cCCCeEEEeeCCeEEEEecCCCCcc--------------ccccCC-eEEEEeeCcEEEEEEecCCCCccEEEEEeCCC--
Q 037368 232 SDRLELIIGRPEAVYFYEVDGRGPC--------------WAFEGE-KKLLGWFRGYLLCVIADQRNSKNIFNVYDLKN-- 294 (823)
Q Consensus 232 s~~~~liv~~~~~I~i~~~~g~~~~--------------~~~~g~-~~~i~~~~~ylv~~s~d~~~~~~~I~I~D~~~-- 294 (823)
.....+++..++.|+.|.....+.. ..+.+. ...++.-..+.++++ .+++|..|-...
T Consensus 233 G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt-----~~G~v~~wG~n~~G 307 (406)
T 4d9s_A 233 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALT-----SDGKLYGWGWNKFG 307 (406)
T ss_dssp CSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEE-----TTSCEEEEECCTTS
T ss_pred CCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEc-----CCCeEEEeeCCCCC
Confidence 2233345556678888875433221 012221 345666666777776 357888885321
Q ss_pred CE-------EEE--eccc---cceeEEEeecCcEEEEEcCCeEEEE
Q 037368 295 RL-------IAH--SLVV---KEVSHMLCEWGNIILVMTDKSVLCI 328 (823)
Q Consensus 295 ~~-------i~~--~~~i---~~v~~v~~~~~~~~vvs~~~~v~~l 328 (823)
++ ... .-.+ ..+..+...+...++++.+++||.-
T Consensus 308 qLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~w 353 (406)
T 4d9s_A 308 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAW 353 (406)
T ss_dssp TTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEE
T ss_pred CCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEe
Confidence 10 100 0011 1255555556667778888877654
No 463
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=50.07 E-value=3.2e+02 Score=32.67 Aligned_cols=27 Identities=4% Similarity=0.084 Sum_probs=13.4
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHH
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYIL 389 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ 389 (823)
+..|..+...+.++.+.|.+|+...++
T Consensus 144 L~~Lv~~iv~~cl~hnae~~AvdLalE 170 (963)
T 4ady_A 144 LTSIFERMIEKCLKASELKLALGIALE 170 (963)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 344444444455555555555555444
No 464
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=49.99 E-value=54 Score=31.30 Aligned_cols=56 Identities=9% Similarity=-0.041 Sum_probs=31.6
Q ss_pred HHHHHHhccHHHHHHHHHhc--CCCHH-----HHHHHHHHH--------------hhhhccCCCHHHHHHHHHHHhC
Q 037368 337 LDMLFKKNLYTVAINLVQSQ--QADAA-----ATAEVLRKY--------------GDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~--~~~~~-----~~~~I~~~y--------------~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
-..+.+.++|+.|++..++. ..|.. ..-.++..| +..+...|++++|+..|-+.+.
T Consensus 48 g~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 124 (225)
T 2yhc_A 48 IYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVR 124 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHH
Confidence 45667889999999887652 11111 111222221 2334457899999999887654
No 465
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=49.87 E-value=31 Score=30.42 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=32.2
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|+...+.. ...+. -..++...|..++..|+|++|+..|-+.+
T Consensus 21 ~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 74 (166)
T 1a17_A 21 NDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAI 74 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455677788877766541 11111 13445566777777888888887776654
No 466
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=48.84 E-value=88 Score=25.05 Aligned_cols=28 Identities=25% Similarity=0.372 Sum_probs=22.6
Q ss_pred HHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 365 EVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 365 ~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..+...|..++..|+|++|+..|-+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 32 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIK 32 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3455678888999999999999988743
No 467
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=48.56 E-value=76 Score=25.76 Aligned_cols=28 Identities=36% Similarity=0.622 Sum_probs=22.7
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
...+...|..++..|+|++|...|.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 36 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKAL 36 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455667888889999999999998764
No 468
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=48.07 E-value=84 Score=26.47 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=26.3
Q ss_pred HHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 338 DMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
..++..++|+.|+...+.. ...+. ...++...|.-++..|+|++|+..|-+.
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (137)
T 3q49_B 17 NRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRA 69 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3445566666666655431 11111 1234455566666666666666655544
No 469
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=47.97 E-value=16 Score=30.50 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=41.0
Q ss_pred HHHHHhccHHHHHHHHHh-------cCCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChH
Q 037368 338 DMLFKKNLYTVAINLVQS-------QQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPS 397 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~-------~~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps 397 (823)
..++++++|+.|+..-+. ...+......|+..+|.-++..|+++.|...|-+.+ .++|.
T Consensus 13 ~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al-~l~P~ 78 (104)
T 2v5f_A 13 KVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL-ELDPE 78 (104)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHCTT
T ss_pred HHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH-hcCCC
Confidence 456677888777764433 111122357889999999999999999999988764 24443
No 470
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=47.70 E-value=1.4e+02 Score=27.19 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=57.6
Q ss_pred ccHHHHHHHHHhcCCCHHHHHHHHH--------HHhhh--hccCCCHHHHHHHHHHHhCCcChHHHHHHhhchhhHHHHH
Q 037368 344 NLYTVAINLVQSQQADAAATAEVLR--------KYGDH--LYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLT 413 (823)
Q Consensus 344 ~~f~~Al~la~~~~~~~~~~~~I~~--------~y~d~--L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl~~~~~~~L~ 413 (823)
-+|.+|....+..+++.+....|.. .|.+| ++-+|+|++|+...... + +|..+ +.+|+
T Consensus 43 ~kY~LA~SYI~~e~Ls~eQKenIln~itlkSde~yL~YWIyiGRg~~~eAlDiA~~L-~--D~qLi---------lyAl~ 110 (161)
T 2ynq_A 43 IQYELASSYVMTESLTEEQRQTVSNNITLKTDEQYMLYWIYIGRSQSEEALELARTI-E--DRDLI---------VYALL 110 (161)
T ss_dssp HHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHHHTCHHHHHHHHHHH-T--CHHHH---------HHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHhhCCccCCHHHHHHHHHHcCCchHHHHHHHHhc-C--cHHHH---------HHHHH
Confidence 4799999999999998888888884 67777 45799999999874332 2 22222 35788
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHH
Q 037368 414 NYLEKLHEKGFASKDHTTLLLNCYT 438 (823)
Q Consensus 414 ~YL~~l~~~~~~~~~~~~lLl~~y~ 438 (823)
.+...+......+-+...-.|+-|.
T Consensus 111 K~~~~vk~d~~Lsg~er~ekL~~~~ 135 (161)
T 2ynq_A 111 KYREQIKGDTDLSGDEKQKKLDEID 135 (161)
T ss_dssp HHHHHHHTCSSSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHH
Confidence 8888877655445555555555554
No 471
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=47.48 E-value=2.2e+02 Score=28.22 Aligned_cols=73 Identities=5% Similarity=0.047 Sum_probs=36.0
Q ss_pred eEEEeeCCCEEEEEecC----CeEEEEcCCCeeeEeEee-cccceeEEEEecCCCEEEEEecC-CCCcccccceeEEEEe
Q 037368 28 ITCCSSGRGKVVIGCDD----GAVSLLDRGLKFNFGFQA-HSSSVLFLQQLKQRNFLVTVGED-EQVSAQQSAVCLKVFD 101 (823)
Q Consensus 28 is~~~~~~~~l~~gs~d----G~i~~~d~~~~~~~~~~~-H~~~V~~i~~~~~~~~l~s~s~D-~~~~~~~~~~~vkvWd 101 (823)
-+++...+..+++|+.+ ..+.+||...+.-..... ....-.+....-++.+++.+|.+ +...... +-+||
T Consensus 49 ~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~----~~~~d 124 (306)
T 3ii7_A 49 AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYL----FECYD 124 (306)
T ss_dssp CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCC----EEEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeee----EEEEe
Confidence 35555555666788755 568888843221112221 11111111112267777888876 2211111 67778
Q ss_pred CCC
Q 037368 102 LDK 104 (823)
Q Consensus 102 l~~ 104 (823)
+..
T Consensus 125 ~~~ 127 (306)
T 3ii7_A 125 TRT 127 (306)
T ss_dssp TTT
T ss_pred CCC
Confidence 763
No 472
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=46.30 E-value=40 Score=29.13 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=39.0
Q ss_pred HHHHHhccHHHHHHHHHhc------CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ------QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~------~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|++..+.. .-+......++...|..++..|+|++|...|.+.+
T Consensus 57 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 116 (164)
T 3ro3_A 57 NAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHL 116 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4455678888888776641 11334456677788999999999999999887763
No 473
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.22 E-value=1.3e+02 Score=25.30 Aligned_cols=30 Identities=37% Similarity=0.640 Sum_probs=24.9
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhCC
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIGH 393 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~ 393 (823)
...+...|..++..|+|++|+..|-+.+..
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 57 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGL 57 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345667789999999999999999988653
No 474
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=46.12 E-value=26 Score=31.37 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=41.5
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CC---------C--------HHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhCCcCh
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QA---------D--------AAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEP 396 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~---------~--------~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~ep 396 (823)
..=..++++++|+.|+..-+.. .+ + ......++...|.-++..|+|++|+..|-+.+. ++|
T Consensus 16 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~-~~p 94 (162)
T 3rkv_A 16 QKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK-REE 94 (162)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HST
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh-cCC
Confidence 3345677889999888765541 11 0 112335666778889999999999999988754 344
Q ss_pred H
Q 037368 397 S 397 (823)
Q Consensus 397 s 397 (823)
.
T Consensus 95 ~ 95 (162)
T 3rkv_A 95 T 95 (162)
T ss_dssp T
T ss_pred c
Confidence 3
No 475
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=45.93 E-value=62 Score=34.66 Aligned_cols=54 Identities=20% Similarity=0.307 Sum_probs=27.5
Q ss_pred HHHHHhccHHHHHHHHHhc---CCCHHHHHHHHHHHhhh-hccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ---QADAAATAEVLRKYGDH-LYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~---~~~~~~~~~I~~~y~d~-L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|++.-++. ..++.....++..||.. ++..|++++|+..|.+.+
T Consensus 342 ~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 342 SLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3344556666666554431 22333344555555554 335566666666665553
No 476
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=45.77 E-value=10 Score=32.70 Aligned_cols=56 Identities=13% Similarity=-0.014 Sum_probs=40.1
Q ss_pred HHHHHHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 335 SKLDMLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 335 ~~i~~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..-..+++.++|+.|+...+.. ..++. -...+...|.-++..|++++|+..|-+.+
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al 78 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHAR 78 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3446778899999999887762 11111 23456667888889999999999988764
No 477
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=45.39 E-value=9.9 Score=32.82 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=43.0
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhCCcChHHH------HHHhhchhhHHHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYV------IQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCY 437 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~eps~v------I~kFl~~~~~~~L~~YL~~l~~~~~~~~~~~~lLl~~y 437 (823)
...+...|..++..|+|++|+..|-+.+.. +|... ..-+...++...=..++.........+..-...+-.+|
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR-NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh-CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 356677899999999999999999887542 23211 11223344444434444443333333333333344455
Q ss_pred HhcCC
Q 037368 438 TKLKD 442 (823)
Q Consensus 438 ~kl~~ 442 (823)
.++++
T Consensus 88 ~~~~~ 92 (137)
T 3q49_B 88 LEMES 92 (137)
T ss_dssp HHTTC
T ss_pred HHHhh
Confidence 55544
No 478
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=44.55 E-value=65 Score=26.39 Aligned_cols=31 Identities=23% Similarity=0.223 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 360 AAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 360 ~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
+-.....+.+-|+.+..+|+|++|+.+.-++
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3446778889999999999999999987775
No 479
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=43.35 E-value=14 Score=39.22 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=23.8
Q ss_pred hhhhccCCCHHHHHHHHHHHhCCcChHHHHHHhh
Q 037368 371 GDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFL 404 (823)
Q Consensus 371 ~d~L~~k~~y~~A~~~y~~ti~~~eps~vI~kFl 404 (823)
|.|+++.++|.+|++.+.+. +.||++|-
T Consensus 310 gG~~~R~~~~~eAl~~wa~a------a~Vi~~Yn 337 (489)
T 4gq4_A 310 AGYHCRNRNVREALQAWADT------ATVIQDYN 337 (489)
T ss_dssp HHHHHHTTCHHHHHHHHHHH------HHHHTTSC
T ss_pred chHHHHhhhHHHHHHHhhhh------hhhhhhcc
Confidence 99999999999999999885 56776664
No 480
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=43.33 E-value=2.5e+02 Score=27.67 Aligned_cols=12 Identities=42% Similarity=0.495 Sum_probs=8.5
Q ss_pred cCHHHHHHHHhc
Q 037368 501 GRYDEALQYISS 512 (823)
Q Consensus 501 ~~~~~al~yl~~ 512 (823)
++|++|++++.+
T Consensus 172 g~~~~A~~~~~~ 183 (292)
T 1qqe_A 172 GQYIEASDIYSK 183 (292)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 777777776654
No 481
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=43.16 E-value=82 Score=24.08 Aligned_cols=29 Identities=34% Similarity=0.591 Sum_probs=23.8
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
...+...|..++..|+|++|+..|.+.+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 37 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE 37 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 45566778889999999999999988753
No 482
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=42.83 E-value=1.3e+02 Score=24.35 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=24.4
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
....+...|..++..|+|++|+..|-+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 39 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAI 39 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45667778899999999999999998874
No 483
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=42.53 E-value=96 Score=33.88 Aligned_cols=107 Identities=14% Similarity=0.184 Sum_probs=0.0
Q ss_pred CceEEEEEecCCC-CcceEEEEEeCCeEEEEEcc---cccccccceeEEecC-----CCCcceEEEeec----CCeEEEE
Q 037368 131 AKITSFLVLEEAP-PILLIAIGLDNGCIYCIKGD---IARERITRFKLQVDN-----QCSVMGLGFRVD----GQALQLF 197 (823)
Q Consensus 131 ~~v~~va~~~d~~-~~~~ia~G~~dG~V~l~~~~---~~~~~~~k~~~~~~~-----~~~It~l~fs~d----g~~~~l~ 197 (823)
...+.++|.||++ . +.++-..|.|++++.+ ..........++..+ ++-..+|+|+|+ + .||
T Consensus 14 ~~P~~~a~~pdG~~r---l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~---~lY 87 (463)
T 2wg3_C 14 RQPVGALHSGDGSQR---LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG---KLY 87 (463)
T ss_dssp SSEEEEECCSSSSCC---EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC---EEE
T ss_pred CCceEEEECCCCCeE---EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC---EEE
Q ss_pred EEcC--------------CeEEEEEecCC-------CCcceEEc----cCCCccceecccCCCeEEEeeCC
Q 037368 198 AVTP--------------NSVILFSLQNQ-------PPKRQFLD----NIGCSTNSVAMSDRLELIIGRPE 243 (823)
Q Consensus 198 ~~t~--------------~~V~~~d~~~~-------~~~~~~l~----~~~~~~~~~~~s~~~~liv~~~~ 243 (823)
++.. +.|.-|.+... .....+++ .....-..+.|.|||.|.++.++
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
No 484
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=42.12 E-value=2.7e+02 Score=27.56 Aligned_cols=71 Identities=8% Similarity=0.021 Sum_probs=33.6
Q ss_pred EEEeeCCCEEEEEecCC-----eEEEEcCCCeeeEeEee-cccceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeC
Q 037368 29 TCCSSGRGKVVIGCDDG-----AVSLLDRGLKFNFGFQA-HSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDL 102 (823)
Q Consensus 29 s~~~~~~~~l~~gs~dG-----~i~~~d~~~~~~~~~~~-H~~~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl 102 (823)
+++..++..+++|+.++ .+..||...+.-..... ...+-.+....-++.+++.+|.++..... .+-+||+
T Consensus 56 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~----~~~~~d~ 131 (302)
T 2xn4_A 56 GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLS----SVEAYNI 131 (302)
T ss_dssp EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEE----EEEEEET
T ss_pred eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCc----eEEEEeC
Confidence 44444555567777553 57888833221111111 11111111112267788888877642111 1666776
Q ss_pred C
Q 037368 103 D 103 (823)
Q Consensus 103 ~ 103 (823)
.
T Consensus 132 ~ 132 (302)
T 2xn4_A 132 K 132 (302)
T ss_dssp T
T ss_pred C
Confidence 5
No 485
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=41.80 E-value=13 Score=31.39 Aligned_cols=51 Identities=12% Similarity=0.124 Sum_probs=28.6
Q ss_pred HHHHhccHHHHHHHHHhc-CCCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 339 MLFKKNLYTVAINLVQSQ-QADAAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 339 ~L~~~~~f~~Al~la~~~-~~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
.+...++|+.|++..+.. ...+. -..++..+|.-++..|+|++|...|.+.
T Consensus 36 ~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 36 TFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344556677776666552 11221 1345555666666677777777666554
No 486
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=40.57 E-value=1e+02 Score=31.00 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=31.4
Q ss_pred ccHHHHHHHHHhc-C-CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 344 NLYTVAINLVQSQ-Q-ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 344 ~~f~~Al~la~~~-~-~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
+.++.|....++. . +++. -..++..||..+...|++++|...|-+.+.
T Consensus 78 ~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 127 (308)
T 2ond_A 78 LFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLA 127 (308)
T ss_dssp HHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 4455555544441 1 2221 245778888888888899999988888765
No 487
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=40.33 E-value=1.2e+02 Score=26.21 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 358 ADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 358 ~~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
+++.. .......|..++..|+|++|+..|-+.+
T Consensus 13 ~~p~~-~~~~~~~a~~~~~~g~~~~A~~~~~~al 45 (142)
T 2xcb_A 13 LSEDT-LEQLYALGFNQYQAGKWDDAQKIFQALC 45 (142)
T ss_dssp CCHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34443 3344567899999999999999998764
No 488
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.88 E-value=55 Score=40.50 Aligned_cols=39 Identities=28% Similarity=0.493 Sum_probs=30.3
Q ss_pred ceeEEEEecCCCEEEEEecCCCCcccccceeEEEEeCCCCCCCCCCCCCCceEEEEEe
Q 037368 66 SVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRV 123 (823)
Q Consensus 66 ~V~~i~~~~~~~~l~s~s~D~~~~~~~~~~~vkvWdl~~~~~~~~~~~~~~~~~~~~~ 123 (823)
.|.++...++..+++|.+.|++ +|||++.+. .|+.+..+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~---------LRiWsl~t~----------~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK---------LKVLDLSTN----------QCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE---------EEEEETTTT----------EEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCE---------EEEEECCCC----------CeEEeech
Confidence 4556666778899999999998 999999853 47666554
No 489
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=39.28 E-value=44 Score=34.73 Aligned_cols=21 Identities=29% Similarity=0.570 Sum_probs=18.9
Q ss_pred HhhhhccCCCHHHHHHHHHHH
Q 037368 370 YGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 370 y~d~L~~k~~y~~A~~~y~~t 390 (823)
.|.|+|++++|.+|++.++++
T Consensus 302 lgGy~yR~~~~reAl~~WA~A 322 (472)
T 3re2_A 302 LGGYYYRKKKYYEAIASWVDA 322 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhhcchHHHHHHHHHHH
Confidence 377999999999999999876
No 490
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=39.06 E-value=22 Score=41.26 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=39.4
Q ss_pred HHHHHHhccHHHHHHHHHhc-CC-CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 337 LDMLFKKNLYTVAINLVQSQ-QA-DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 337 i~~L~~~~~f~~Al~la~~~-~~-~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
-..+++.++|+.|++..+.. .. |. -...+...|.-++..|+|++|+..|-+.+
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p~--~~~a~~~lg~~~~~~g~~~~A~~~~~~al 494 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVGW--RWRLVWYRAVAELLTGDYDSATKHFTEVL 494 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCcc--hHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35677889999999887652 11 11 13456677888999999999999998875
No 491
>1w53_A Phosphoserine phosphatase RSBU; stress, kinase, hydrolase; 1.6A {Bacillus subtilis} SCOP: a.186.1.2
Probab=38.41 E-value=34 Score=27.66 Aligned_cols=44 Identities=30% Similarity=0.514 Sum_probs=28.9
Q ss_pred CHHHHH-HHHhcCChHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHhh
Q 037368 502 RYDEAL-QYISSLDPSQAGVTVKEYGKILIEH--KPMETIDILLRLCT 546 (823)
Q Consensus 502 ~~~~al-~yl~~l~~~~~~~~i~k~~~~Ll~~--~p~~~~~ll~~~~~ 546 (823)
+|.+.| .||++.+- +++.-..+|+++++++ .||+.+.+-.+...
T Consensus 10 ~Y~~iL~~yl~~~~E-~~Ly~~q~fs~~~iek~i~PEeiV~iHk~~i~ 56 (84)
T 1w53_A 10 RYHQLLSRYIAELTE-TSLYQAQKFSRKTIEHQIPPEEIISIHRKVLK 56 (84)
T ss_dssp HHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccH-HHHHHHHHhhHHHHHcCCCHHHHHHHHHHHHH
Confidence 344444 34444443 5566677899999876 59999998766543
No 492
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=38.01 E-value=2.6e+02 Score=32.03 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhCChHHHHHHHHH
Q 037368 465 TAIRVCRAANYHEHAMYVAKKAGKHELYLKILLE 498 (823)
Q Consensus 465 ~ai~vl~~~g~~~~a~~la~~~~~~~~~l~il~~ 498 (823)
.|-+.+.+.|+++.|+.|++.-|+|+++++++-.
T Consensus 448 ~aA~~ae~~G~~~dAi~LY~La~~~d~vl~lln~ 481 (661)
T 2qx5_A 448 QAARRADEDGRIYDSILLYQLAEEYDIVITLVNS 481 (661)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3344677888888888888877777777666543
No 493
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=37.75 E-value=2.9e+02 Score=26.72 Aligned_cols=22 Identities=23% Similarity=0.307 Sum_probs=17.0
Q ss_pred hhHHHHHHHhccHHHHHHHHHh
Q 037368 699 EGLLYLYEKLKLYKEVIACYTQ 720 (823)
Q Consensus 699 ~~~v~L~~k~g~~~~al~~~~~ 720 (823)
..+..+|.++|.+++|+.++-.
T Consensus 199 ~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 199 NNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 3456688889999999888764
No 494
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=37.12 E-value=94 Score=34.27 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=34.9
Q ss_pred HHHhccHHHHHHHHHhc------CCC--HHHHHHHHHHHhhhhccCCCHHHHHHHHHHH
Q 037368 340 LFKKNLYTVAINLVQSQ------QAD--AAATAEVLRKYGDHLYSKQDYDEAMSQYILT 390 (823)
Q Consensus 340 L~~~~~f~~Al~la~~~------~~~--~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~t 390 (823)
+..+++|++|+.+.+.. -+. -..........|.-+..+|+|++|..+|.++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 377 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRM 377 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 44578899998877641 111 1124555556677778899999999998876
No 495
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=36.94 E-value=86 Score=34.00 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=22.9
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
....+...|..++.+|+|++|+..|-+.+.
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~ 296 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVS 296 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 345566778888888889999888887643
No 496
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=36.70 E-value=41 Score=30.93 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=38.7
Q ss_pred HHHHHhccHHHHHHHHHhc-----CC-CHHHHHHHHHHHhhhhccCCCHHHHHHHHHHHh
Q 037368 338 DMLFKKNLYTVAINLVQSQ-----QA-DAAATAEVLRKYGDHLYSKQDYDEAMSQYILTI 391 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-----~~-~~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti 391 (823)
..+...++|+.|+...+.. .. +......++...|.-++..|+|++|...|.+.+
T Consensus 34 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 93 (203)
T 3gw4_A 34 YVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEER 93 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455678888877766542 11 344566777788999999999999999988763
No 497
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=36.62 E-value=1.7e+02 Score=28.36 Aligned_cols=24 Identities=21% Similarity=0.390 Sum_probs=21.2
Q ss_pred CchhHHHHHHHhccHHHHHHHHHh
Q 037368 697 FKEGLLYLYEKLKLYKEVIACYTQ 720 (823)
Q Consensus 697 ~~~~~v~L~~k~g~~~~al~~~~~ 720 (823)
|+++-+.+|+.+|.+.+|-.+|..
T Consensus 152 fYe~wA~~lE~~g~~~~A~~Vy~~ 175 (223)
T 4aez_C 152 FYEEYANYFESRGLFQKADEVYQK 175 (223)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 678889999999999999998864
No 498
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=36.21 E-value=1.9e+02 Score=31.64 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=21.5
Q ss_pred HHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 364 AEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 364 ~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..++..||+.+...|++++|...|-+.+.
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~ 349 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLA 349 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhC
Confidence 45677777777778888888888777654
No 499
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=36.01 E-value=1.1e+02 Score=33.15 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=39.6
Q ss_pred HHHHHhccHHHHHHHHHhc-----CCC----------HHHHHHHHHHHhhhhccCCCHHHHHHHHHHHhC
Q 037368 338 DMLFKKNLYTVAINLVQSQ-----QAD----------AAATAEVLRKYGDHLYSKQDYDEAMSQYILTIG 392 (823)
Q Consensus 338 ~~L~~~~~f~~Al~la~~~-----~~~----------~~~~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~ 392 (823)
..++++++|+.|+..-++. ..+ ......++...|.-++..|+|++|+..|-+.+.
T Consensus 276 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 276 TVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5667889999998876541 111 111246667778889999999999999988753
No 500
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=35.61 E-value=38 Score=26.59 Aligned_cols=39 Identities=21% Similarity=0.433 Sum_probs=28.6
Q ss_pred HHHHHHHHhhhhccCCCHHHHHHHHHHHhCCc-ChHHHHHHh
Q 037368 363 TAEVLRKYGDHLYSKQDYDEAMSQYILTIGHL-EPSYVIQKF 403 (823)
Q Consensus 363 ~~~I~~~y~d~L~~k~~y~~A~~~y~~ti~~~-eps~vI~kF 403 (823)
..+|.. |+.|+.+|++++|+.+|.+.+... .|...+.-|
T Consensus 18 l~eV~~--GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 18 LEEIQL--GEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHH--HHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHH--HHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 344444 999999999999999999886533 466655544
Done!