Query 037376
Match_columns 612
No_of_seqs 153 out of 173
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 11:36:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12222 PNGaseA: Peptide N-ac 100.0 1E-122 3E-127 992.5 51.3 405 58-494 1-427 (427)
2 PF09113 N-glycanase_C: Peptid 95.4 0.085 1.8E-06 50.4 8.7 102 247-380 11-140 (141)
3 PF09112 N-glycanase_N: Peptid 94.3 0.34 7.4E-06 48.0 10.0 86 105-196 42-177 (177)
4 PF02837 Glyco_hydro_2_N: Glyc 75.2 6.9 0.00015 36.9 5.9 46 299-370 95-140 (167)
5 PF02837 Glyco_hydro_2_N: Glyc 52.0 61 0.0013 30.4 7.5 71 93-183 73-144 (167)
6 PRK10150 beta-D-glucuronidase; 48.4 37 0.00081 39.3 6.5 49 296-370 89-137 (604)
7 PF08531 Bac_rhamnosid_N: Alph 32.7 71 0.0015 31.1 4.8 48 302-369 16-65 (172)
8 PF12222 PNGaseA: Peptide N-ac 28.7 1.8E+02 0.0038 33.0 7.5 96 102-200 215-321 (427)
9 PF09112 N-glycanase_N: Peptid 28.0 85 0.0018 31.5 4.4 50 330-381 126-176 (177)
10 PRK10340 ebgA cryptic beta-D-g 25.7 1.2E+02 0.0025 38.0 6.0 44 299-369 136-179 (1021)
11 PF07172 GRP: Glycine rich pro 22.1 51 0.0011 29.7 1.5 12 1-13 1-12 (95)
12 PF08531 Bac_rhamnosid_N: Alph 22.1 3.4E+02 0.0074 26.3 7.4 56 114-179 8-66 (172)
No 1
>PF12222 PNGaseA: Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A; InterPro: IPR021102 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (PNGase A), unlike many other amidases, is capable of hydrolysing glycopeptides with an alpha-1,3-fucosylated asparagine-bound N-acetylglucosamine (GlcNAc). PNGase A is a heterodimer composed of a large and small subunit []. This entry represents the PNGase A precursor, which contains both subunits and is activated by proteolytic cleavage.
Probab=100.00 E-value=1.4e-122 Score=992.47 Aligned_cols=405 Identities=49% Similarity=0.849 Sum_probs=365.5
Q ss_pred eEEEeecCcCCCCCCCceEEEeeeecccccCCCCeeeeccCCCCCCCCCccEEEEEEEEEEecccceeEEEEEECCeEee
Q 037376 58 RYFEVTKPIEIPKTNPCSHHILHHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELL 137 (612)
Q Consensus 58 ~~FEV~~Pv~~P~~~~c~~~Ll~h~F~nSyg~Pp~~~~YtPP~~c~~~~~s~VvL~l~~t~~G~QyDRl~~v~l~gvev~ 137 (612)
|+|||++|+..|+. +|+++||+|+||||||+|++...|+||. | +|++|||+|+++|+|||||||++|||||+|||
T Consensus 1 E~fev~~P~~~p~~-~c~~~l~~h~F~~Syg~P~~~~~y~Pp~-c---~~~~VvL~~~~~~~G~QyDRl~~v~l~gvev~ 75 (427)
T PF12222_consen 1 EVFEVTPPVVTPKG-VCSVLLLNHSFGNSYGKPPVGTYYTPPD-C---SFSKVVLNLTVTSKGRQYDRLAGVWLGGVEVW 75 (427)
T ss_pred CceEEcCCCCCCCC-ceEEEEeeeeeccccCCCceeeecCCCC-C---cceEEEEEEEEEecceecceEEEEEECCEEEE
Confidence 78999999988875 9999999999999999999876788777 6 79999999999999999999999999999999
Q ss_pred eeccCCccCCcceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCCCCCCCCCCCcccccCCC
Q 037376 138 RSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGY 217 (612)
Q Consensus 138 RtSTaEP~~~gI~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~~~~~~~~~~~~~~~~~~ 217 (612)
|||||||+++||+|+++||||+|++||+ ++|+|+|+|+|+||++|||+|+|+|||+||+.+ . +
T Consensus 76 RtSTaEP~~~gi~wt~~KDvT~Y~~L~~--~~~~~~~~l~N~v~~~ytG~f~v~lt~~fy~~~--------~-------~ 138 (427)
T PF12222_consen 76 RTSTAEPTPNGIVWTVSKDVTRYSSLFK--KPQTLIFDLGNIVDDTYTGSFNVTLTLTFYPAD--------D-------P 138 (427)
T ss_pred eecCCCCCCCcceEEEEEcHHHhHHHhc--CCceEEEEeCcEeccccccEEEEEEEEEEecCC--------C-------C
Confidence 9999999999999999999999999999 689999999999999999999999999999875 2 4
Q ss_pred CCCCCEEEeCccC-CCCCCCeeEEeecCCCcceeEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhhcCCCC-CCCC
Q 037376 218 GSKADLIWPISRN-LPLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLT-DTPG 295 (612)
Q Consensus 218 ~~~aD~IiPis~~-~~~n~g~~f~i~n~~d~~~~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~~~~~~-~~~G 295 (612)
.++||+||||+++ .+.|.+.||.|++.. ..+.+.||+|++||+||||||||++|||||+|+||+|...++.. +.+|
T Consensus 139 ~~~ad~i~Pis~~~s~~n~~~~f~ip~~~--~~~~~~~P~Nt~ra~lei~asg~~~eEFWYsNv~d~~~~~f~~~~~~~G 216 (427)
T PF12222_consen 139 AKPADLILPISANKSPYNSPSWFSIPSDD--AVTSLVLPRNTYRAVLEIFASGNGNEEFWYSNVPDSDVDAFNNAGELYG 216 (427)
T ss_pred CCCCceEECcccCCCCCCCcceEEecCcc--ceeeEeCCCCcEEEEEEEEecCCCcccceecCCChHHhhhhcccccccC
Confidence 6789999999987 556778999996433 45566799999999999999999999999999999998887654 4599
Q ss_pred CCCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-----
Q 037376 296 NGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA----- 370 (612)
Q Consensus 296 ~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~----- 370 (612)
|||||||+|+|||++||++|||||||||||+|+|||||++|||||+|+|+||||||||+|+|||+|+|+|+|+|+
T Consensus 217 ~gpfReV~V~iDg~lag~~~PfPvIfTGGI~P~lWrPI~~i~aFdl~~y~iDlTPfLp~L~dg~~h~~~i~V~~~~~~~~ 296 (427)
T PF12222_consen 217 NGPFREVQVYIDGQLAGVVWPFPVIFTGGINPFLWRPIVGIGAFDLPSYDIDLTPFLPLLWDGKPHTFEIRVVNAEDDGD 296 (427)
T ss_pred CCCcEEEEEEECCEEEEEECCCCeEEeCCcCcccccccCCCcccCCCceeEEeccchhcccCCCccEEEEEEEccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred ---------cccEEEeeEEEEEEeCCCceeeceeEEEecCceeeeeecc----cccCce--EEEEEEEEEEEEEEEEEcC
Q 037376 371 ---------LNVWYIDANLHLWLDGRSAKTEGKLLKHSSVPLQVYLESN----FKGLDG--TFLTNVNRSISSLGWVESS 435 (612)
Q Consensus 371 ---------~~~W~vsgnL~lwlD~~~~~ttG~l~~~~~p~~~~~~~~~----~~g~~g--~~~~~a~R~ls~~g~V~ss 435 (612)
.++|+|+||||||+|++...++|++....++.......+. ..|.++ .|.+.++|+++++|
T Consensus 297 g~~~~~~~v~~~W~VsgnL~lwld~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~y~~~~~r~l~~~~----- 371 (427)
T PF12222_consen 297 GSATLTNSVGSNWYVSGNLFLWLDSSSSSTTGKSPSVVSPEPSISVSSFISIFSTGFNGTLSYSVSASRSLSITS----- 371 (427)
T ss_pred ccccccCccCceEEEEEEEEEEECCCCcccCCCccceecCCcceeeeeeeeccCCCceeEEEEEEEEEEEEEEee-----
Confidence 3799999999999999999999988877776654443322 245665 48999999999988
Q ss_pred CCceEEEEEEEEEEEEeEEecCCCceeeEEEEEEEeeeEEEEecCCceeEeEEEEEeee
Q 037376 436 HGKITTHFIQDFAYSNSMVMGNSGNLQIVNQTIHFDDTVSAEMQSSNAYFTKSFKVFPF 494 (612)
Q Consensus 436 ~G~~ttt~~Q~~~f~N~~~~s~~G~~Q~v~q~~~~~~~v~~~~~~~~~~~~~~~~~yPL 494 (612)
+.+++|+|+++|+|.|.++++|..|.++|++++...++...+.. ++..+.+++|||
T Consensus 372 --~~~~~~~q~l~~sN~~~~s~~g~~Q~~~q~~~~~~~~~~~~~~~-~~~~~~~~~yPl 427 (427)
T PF12222_consen 372 --SSTVSWSQNLSYSNVQQYSKFGNSQSVNQTTSGTSSSTHFGESA-IYTSSLTFSYPL 427 (427)
T ss_pred --EEEEEEEeEEEEEEEEEEcccCcEEEEEEEEEeeEEEEEecccc-eeEEEEEEeccC
Confidence 67899999999999999999999999999999987765544433 677799999998
No 2
>PF09113 N-glycanase_C: Peptide-N-glycosidase F, C terminal; InterPro: IPR015197 This domain adopts an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. It is similar in topology to many viral capsid proteins, as well as lectins and several glucanases. This domain allows the protein to bind sugars and catalyses the complete removal of N-linked oligosaccharide chains from glycoproteins []. ; PDB: 1PNF_A 1PNG_A 1PGS_A 3KS7_D 3PMS_A.
Probab=95.37 E-value=0.085 Score=50.43 Aligned_cols=102 Identities=21% Similarity=0.304 Sum_probs=63.6
Q ss_pred cceeEEecCCCceEEEEEEEeeCCC-----CceeeecCCChhhhhcCCCCCCCCCCCeeEEEEEECCeEEEEEcc-----
Q 037376 247 IGVKEFVIPQNVYRAVLEVYVSFHE-----NDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWP----- 316 (612)
Q Consensus 247 ~~~~~v~iP~Nt~rA~lev~asg~~-----~eEFWYsNvp~~y~~~~~~~~~~G~GpfREV~V~iDG~laGv~~P----- 316 (612)
.....+++|.++.+|.|...++||| ++||= .|+=.|+|||+.+=...|
T Consensus 11 ~~~~~f~lp~~~k~~~L~~iiTGHG~~~~gc~EFc----------------------~~~h~~~vnG~~~f~~~~~~~~C 68 (141)
T PF09113_consen 11 RLPVNFTLPANAKNARLRYIITGHGSGNNGCDEFC----------------------PKSHHFYVNGKEVFSFAPWRDDC 68 (141)
T ss_dssp SEEEEEEE-TT-SEEEEEEEEEEEEETTEEEETTS-----------------------EEEEEEETTEEEEEEEE-BS-G
T ss_pred ceeEEEECCcccceEEEEEEEecCCCCCCCcceec----------------------ccccEEEECCeEeeecCCCccch
Confidence 3467899999999999999999999 88882 377789999999811110
Q ss_pred --cceEEeC--C-c--cCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc-----Cc------ccEEEee
Q 037376 317 --FTVVFTG--G-I--NPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN-----AL------NVWYIDA 378 (612)
Q Consensus 317 --fPvIfTG--G-I--~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n-----~~------~~W~vsg 378 (612)
|+..=.+ | + +=.-|=|=. ..++.+||||..+.. .|+|.+.|.- +. .+|.+|+
T Consensus 69 a~~~~~n~~p~G~w~~~Rs~WCPG~-----~v~p~~~dl~~~~~g-----~ht~~~~i~~~~~~~g~~~~~~~~~~~vS~ 138 (141)
T PF09113_consen 69 ASNRLYNPAPSGTWLYSRSNWCPGM-----VVDPWRIDLTDAVAG-----GHTFSVDIPYAQWFEGNDPTSDPGYWLVSS 138 (141)
T ss_dssp GGGSGG-TTT-SCESS-BSS--TTE-----EE--EEEEEE-GGGT-----TSEEEEEEET----BTSB-TT--EEEEEEE
T ss_pred hhccccCccccceEecCCCCCCCCC-----CCCceEeccccccCC-----CceEEEEeccccccCCCccccccceEEEEE
Confidence 1111011 1 1 112233311 345799999987765 5899999873 32 7899998
Q ss_pred EE
Q 037376 379 NL 380 (612)
Q Consensus 379 nL 380 (612)
-|
T Consensus 139 ~l 140 (141)
T PF09113_consen 139 YL 140 (141)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 3
>PF09112 N-glycanase_N: Peptide-N-glycosidase F, N terminal; InterPro: IPR015196 This domain adopts an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. It is similar in topology to many viral capsid proteins, as well as lectins and several glucanases. This domain allows the protein to bind sugars and catalyses the complete removal of N-linked oligosaccharide chains from glycoproteins []. ; PDB: 3PMS_A 3KS7_D 1PNF_A 1PNG_A 1PGS_A.
Probab=94.31 E-value=0.34 Score=47.99 Aligned_cols=86 Identities=24% Similarity=0.363 Sum_probs=56.8
Q ss_pred CCccEEEEEEEEEEecccceeEEEEEEC---------------------------------------CeEeeeeccCCcc
Q 037376 105 KKVSKIVLEWNATCKGRQFDRIFGVWLG---------------------------------------GVELLRSCTAEPR 145 (612)
Q Consensus 105 ~~~s~VvL~l~~t~~G~QyDRl~~v~l~---------------------------------------gvev~RtSTaEP~ 145 (612)
.....|-|+++..|+|.-|||.+.+|+= .+||.|==||.=.
T Consensus 42 ~~~~~v~l~vt~~snGD~wDrtGsvFvip~~~~~~~l~~~~g~~~~P~~~~~~~~y~gi~~t~~y~p~iELmRF~TPFgv 121 (177)
T PF09112_consen 42 KNVMTVFLEVTQSSNGDAWDRTGSVFVIPKDSKINFLDLAQGKKKLPEYDSGNGEYQGIIATDDYLPPIELMRFITPFGV 121 (177)
T ss_dssp TTEEEEEEEEEEEEGG--S--EEEEEEEETTTTEEEHHHHHH--------HHHHT-TTSS-BTTB---EEEEEEE--SSS
T ss_pred ccceEEEEEEEecCCCCcccccceEEEEeCCcCcchhhhhccccccccccccccceeeeeeccccCchhHhhhhhhhhhc
Confidence 3677899999999999999999999972 3799998888764
Q ss_pred CCc-------ceEE----EEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEE
Q 037376 146 ATG-------IVWS----VKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYF 196 (612)
Q Consensus 146 ~~g-------I~Wt----v~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~f 196 (612)
... -.|. ++.|||.+.+||+ +...+-+.++|+-... |.|+|.+.|
T Consensus 122 ~~~~~~~v~~~~W~~~v~w~qDIT~L~plL~--ge~~igi~i~~w~~~G----~~vSl~l~~ 177 (177)
T PF09112_consen 122 GHFNYNPVYGPKWEDSVPWRQDITDLYPLLK--GEVYIGIFIDNWDKEG----YKVSLDLDY 177 (177)
T ss_dssp BSTTCC-TT-----STCEEEEE-GGGTTTSS--EEEEEEEEE---STT-----EEEEEEEEE
T ss_pred cccccccccccCccccceeEEEchHhHHhhC--CCeEEEEEEcccccCc----eEEEEEecC
Confidence 432 2555 8999999999999 5677888888876554 677777765
No 4
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This domain has a jelly-roll fold [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3FN9_C 2VZU_A 2X09_A 2VZO_A 2X05_A 2VZV_B ....
Probab=75.20 E-value=6.9 Score=36.85 Aligned_cols=46 Identities=26% Similarity=0.463 Sum_probs=34.7
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
.....|+|||+++|.-. || ..++++|||++| ..|++++|+|.|.+.
T Consensus 95 ~~~a~v~vNG~~vg~~~-------~~----------------~~~~~~dIt~~l---~~g~~N~l~V~v~~~ 140 (167)
T PF02837_consen 95 DYAAEVYVNGKLVGSHE-------GG----------------YTPFEFDITDYL---KPGEENTLAVRVDNW 140 (167)
T ss_dssp ESEEEEEETTEEEEEEE-------ST----------------TS-EEEECGGGS---SSEEEEEEEEEEESS
T ss_pred eEeeEEEeCCeEEeeeC-------CC----------------cCCeEEeChhhc---cCCCCEEEEEEEeec
Confidence 46789999999999831 22 225999999975 458889999999863
No 5
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This domain has a jelly-roll fold [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3FN9_C 2VZU_A 2X09_A 2VZO_A 2X05_A 2VZV_B ....
Probab=51.96 E-value=61 Score=30.43 Aligned_cols=71 Identities=21% Similarity=0.231 Sum_probs=45.2
Q ss_pred eeeccCCCCCCCCCccEEEEEEEEEEecccceeEEEEEECCeEeeeeccCCccCCcceEEEEEehhhhhhhhcccCC-ee
Q 037376 93 LANYTPPSHCSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNET-QT 171 (612)
Q Consensus 93 ~~~YtPP~~c~~~~~s~VvL~l~~t~~G~QyDRl~~v~l~gvev~RtSTaEP~~~gI~Wtv~KDvT~Y~sLf~~~~~-~~ 171 (612)
...++-|... .-.+++|++.. . |..+.|||||..|-+.-- -+=.++-|||.|. +. +. .+
T Consensus 73 r~~f~lp~~~---~~~~~~L~f~g----v--~~~a~v~vNG~~vg~~~~-------~~~~~~~dIt~~l---~~-g~~N~ 132 (167)
T PF02837_consen 73 RRTFTLPADW---KGKRVFLRFEG----V--DYAAEVYVNGKLVGSHEG-------GYTPFEFDITDYL---KP-GEENT 132 (167)
T ss_dssp EEEEEESGGG---TTSEEEEEESE----E--ESEEEEEETTEEEEEEES-------TTS-EEEECGGGS---SS-EEEEE
T ss_pred EEEEEeCchh---cCceEEEEecc----c--eEeeEEEeCCeEEeeeCC-------CcCCeEEeChhhc---cC-CCCEE
Confidence 3455555532 23567776643 3 677889999999976321 1225889999863 43 34 67
Q ss_pred EEEEECceecce
Q 037376 172 FAVYLGNLVDST 183 (612)
Q Consensus 172 l~~~L~NiVd~~ 183 (612)
|.+.+.|..+..
T Consensus 133 l~V~v~~~~~~~ 144 (167)
T PF02837_consen 133 LAVRVDNWPDGS 144 (167)
T ss_dssp EEEEEESSSGGG
T ss_pred EEEEEeecCCCc
Confidence 888888877654
No 6
>PRK10150 beta-D-glucuronidase; Provisional
Probab=48.39 E-value=37 Score=39.29 Aligned_cols=49 Identities=27% Similarity=0.466 Sum_probs=37.0
Q ss_pred CCCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 296 NGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 296 ~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
.|-...-.|+|||+.||.- .||-.| +++|||++|-. |+...|.|.|.|.
T Consensus 89 egv~~~a~V~lNG~~vg~~-------~~~~~~----------------f~~DIT~~l~~---G~~n~L~V~v~n~ 137 (604)
T PRK10150 89 GSVTHYAKVWVNGQEVMEH-------KGGYTP----------------FEADITPYVYA---GKSVRITVCVNNE 137 (604)
T ss_pred CcccceEEEEECCEEeeeE-------cCCccc----------------eEEeCchhccC---CCceEEEEEEecC
Confidence 3456788999999999942 344443 79999998754 8767899999775
No 7
>PF08531 Bac_rhamnosid_N: Alpha-L-rhamnosidase N-terminal domain; InterPro: IPR013737 This domain is found in bacterial rhamnosidase A and B enzymes and is probably involved in substrate recognition. ; PDB: 2OKX_B.
Probab=32.69 E-value=71 Score=31.07 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=26.9
Q ss_pred EEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCC--CCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 302 VVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFD--LPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 302 V~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFd--lp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
-+++|||+.||.-. .+|.+ -.++ +.--.+||||||-. | +..|++.|.+
T Consensus 16 Y~l~vNG~~V~~~~---------l~P~~-------t~y~~~~~Y~tyDVt~~L~~---G-~N~iav~lg~ 65 (172)
T PF08531_consen 16 YELYVNGERVGDGP---------LAPGW-------TDYDKRVYYQTYDVTPYLRP---G-ENVIAVWLGN 65 (172)
T ss_dssp EEEEETTEEEEEE------------------------BTTEEEEEEEE-TTT--T---T-EEEEEEEEEE
T ss_pred EEEEECCEEeeCCc---------ccccc-------ccCCCceEEEEEeChHHhCC---C-CCEEEEEEeC
Confidence 46899999999754 11211 1222 22346899999876 7 5688888854
No 8
>PF12222 PNGaseA: Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A; InterPro: IPR021102 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A (PNGase A), unlike many other amidases, is capable of hydrolysing glycopeptides with an alpha-1,3-fucosylated asparagine-bound N-acetylglucosamine (GlcNAc). PNGase A is a heterodimer composed of a large and small subunit []. This entry represents the PNGase A precursor, which contains both subunits and is activated by proteolytic cleavage.
Probab=28.71 E-value=1.8e+02 Score=33.00 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=68.1
Q ss_pred CCCCCccEEEEEEEEEEecccceeEEEEEECCeE--eeeeccCCccCCcceEEEEEehhhhhhhhcccCCeeEEEEECce
Q 037376 102 CSSKKVSKIVLEWNATCKGRQFDRIFGVWLGGVE--LLRSCTAEPRATGIVWSVKKDLTRYHSLLVKNETQTFAVYLGNL 179 (612)
Q Consensus 102 c~~~~~s~VvL~l~~t~~G~QyDRl~~v~l~gve--v~RtSTaEP~~~gI~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~Ni 179 (612)
||.++|-.|.+.++....|.++---. ||=||+. +||=-++=-.= -.-+++-|||.|+.||...++.+|.+.+-|+
T Consensus 215 ~G~gpfReV~V~iDg~lag~~~PfPv-IfTGGI~P~lWrPI~~i~aF--dl~~y~iDlTPfLp~L~dg~~h~~~i~V~~~ 291 (427)
T PF12222_consen 215 YGNGPFREVQVYIDGQLAGVVWPFPV-IFTGGINPFLWRPIVGIGAF--DLPSYDIDLTPFLPLLWDGKPHTFEIRVVNA 291 (427)
T ss_pred cCCCCcEEEEEEECCEEEEEECCCCe-EEeCCcCcccccccCCCccc--CCCceeEEeccchhcccCCCccEEEEEEEcc
Confidence 45679999999999888888775433 6668875 35422211111 2446999999999999853456899999997
Q ss_pred ecce---------eeeEEEEEEEEEEecCC
Q 037376 180 VDST---------YTGVYHVDITLYFYPAD 200 (612)
Q Consensus 180 Vd~~---------yTG~f~vtltl~fY~~~ 200 (612)
.++. ....+.|+-.|+.|...
T Consensus 292 ~~~~~g~~~~~~~v~~~W~VsgnL~lwld~ 321 (427)
T PF12222_consen 292 EDDGDGSATLTNSVGSNWYVSGNLFLWLDS 321 (427)
T ss_pred cccccccccccCccCceEEEEEEEEEEECC
Confidence 6643 34578899999999764
No 9
>PF09112 N-glycanase_N: Peptide-N-glycosidase F, N terminal; InterPro: IPR015196 This domain adopts an eight-stranded antiparallel beta jelly roll configuration, with the beta strands arranged into two sheets. It is similar in topology to many viral capsid proteins, as well as lectins and several glucanases. This domain allows the protein to bind sugars and catalyses the complete removal of N-linked oligosaccharide chains from glycoproteins []. ; PDB: 3PMS_A 3KS7_D 1PNF_A 1PNG_A 1PGS_A.
Probab=28.01 E-value=85 Score=31.50 Aligned_cols=50 Identities=18% Similarity=0.211 Sum_probs=28.2
Q ss_pred ccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-cccEEEeeEEE
Q 037376 330 WRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA-LNVWYIDANLH 381 (612)
Q Consensus 330 WrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~-~~~W~vsgnL~ 381 (612)
.+||-+..==+--.|+-|||+|+|+|. | +-.|++-+.+= ...|.+|.+|-
T Consensus 126 ~~~v~~~~W~~~v~w~qDIT~L~plL~-g-e~~igi~i~~w~~~G~~vSl~l~ 176 (177)
T PF09112_consen 126 YNPVYGPKWEDSVPWRQDITDLYPLLK-G-EVYIGIFIDNWDKEGYKVSLDLD 176 (177)
T ss_dssp CC-TT-----STCEEEEE-GGGTTTSS-E-EEEEEEEE---STT-EEEEEEEE
T ss_pred cccccccCccccceeEEEchHhHHhhC-C-CeEEEEEEcccccCceEEEEEec
Confidence 445544443334469999999999985 4 66777777653 34588888774
No 10
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=25.72 E-value=1.2e+02 Score=37.97 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=32.8
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
.....|+|||+.||.- .||-.| +++|||++|- .|+ ++|.|.|.+
T Consensus 136 ~s~a~VwvNG~~VG~~-------~g~~~p----------------fefDIT~~l~---~G~-N~LaV~V~~ 179 (1021)
T PRK10340 136 ETYFEVYVNGQYVGFS-------KGSRLT----------------AEFDISAMVK---TGD-NLLCVRVMQ 179 (1021)
T ss_pred ceEEEEEECCEEeccc-------cCCCcc----------------EEEEcchhhC---CCc-cEEEEEEEe
Confidence 4678999999999943 143333 7899999874 475 799999963
No 11
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=22.13 E-value=51 Score=29.66 Aligned_cols=12 Identities=33% Similarity=0.199 Sum_probs=5.8
Q ss_pred CCCCchhHHHHHH
Q 037376 1 MASFHFPLFLCIS 13 (612)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (612)
|+ |-..|||.|+
T Consensus 1 Ma-SK~~llL~l~ 12 (95)
T PF07172_consen 1 MA-SKAFLLLGLL 12 (95)
T ss_pred Cc-hhHHHHHHHH
Confidence 66 4444444344
No 12
>PF08531 Bac_rhamnosid_N: Alpha-L-rhamnosidase N-terminal domain; InterPro: IPR013737 This domain is found in bacterial rhamnosidase A and B enzymes and is probably involved in substrate recognition. ; PDB: 2OKX_B.
Probab=22.09 E-value=3.4e+02 Score=26.32 Aligned_cols=56 Identities=21% Similarity=0.238 Sum_probs=30.5
Q ss_pred EEEEEecccceeEEEEEECCeEeeeeccCCccCC--cceEEE-EEehhhhhhhhcccCCeeEEEEECce
Q 037376 114 WNATCKGRQFDRIFGVWLGGVELLRSCTAEPRAT--GIVWSV-KKDLTRYHSLLVKNETQTFAVYLGNL 179 (612)
Q Consensus 114 l~~t~~G~QyDRl~~v~l~gvev~RtSTaEP~~~--gI~Wtv-~KDvT~Y~sLf~~~~~~~l~~~L~Ni 179 (612)
+.++..| .+.+||||..|=+.. -.|... .-.|-+ +=|||.|+. + +...|.+.|+|-
T Consensus 8 l~isa~g-----~Y~l~vNG~~V~~~~-l~P~~t~y~~~~~Y~tyDVt~~L~---~-G~N~iav~lg~g 66 (172)
T PF08531_consen 8 LYISALG-----RYELYVNGERVGDGP-LAPGWTDYDKRVYYQTYDVTPYLR---P-GENVIAVWLGNG 66 (172)
T ss_dssp EEEEEES-----EEEEEETTEEEEEE---------BTTEEEEEEEE-TTT-----T-TEEEEEEEEEE-
T ss_pred EEEEeCe-----eEEEEECCEEeeCCc-cccccccCCCceEEEEEeChHHhC---C-CCCEEEEEEeCC
Confidence 4445555 578999999998755 223211 112222 569998865 3 567788888763
Done!