Query 037376
Match_columns 612
No_of_seqs 153 out of 173
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 19:54:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ks7_A Putative putative pngas 98.7 2.9E-06 9.8E-11 89.6 22.6 225 108-381 65-394 (397)
2 3pms_A Peptide:N-glycosidase F 98.4 5.3E-06 1.8E-10 86.0 16.3 184 80-313 19-226 (326)
3 3lpf_A Beta-glucuronidase; alp 58.5 14 0.00049 41.1 6.8 47 299-371 94-140 (605)
4 3cmg_A Putative beta-galactosi 57.4 16 0.00054 41.2 7.0 47 298-370 75-121 (667)
5 3fn9_A Putative beta-galactosi 47.1 31 0.0011 39.3 7.2 47 298-370 86-132 (692)
6 3hn3_A Beta-G1, beta-glucuroni 43.7 24 0.00081 39.2 5.5 47 299-371 107-156 (613)
7 2okx_A Rhamnosidase B; alpha b 43.6 40 0.0014 39.5 7.7 70 249-370 27-97 (956)
8 3gm8_A Glycoside hydrolase fam 36.8 37 0.0013 39.3 5.9 46 299-371 93-138 (801)
9 3oba_A Beta-galactosidase; TIM 31.1 81 0.0028 37.7 7.6 43 300-369 141-183 (1032)
10 3pdd_A Glycoside hydrolase, fa 28.5 3.7E+02 0.013 25.1 12.2 61 296-386 28-88 (190)
11 3pms_A Peptide:N-glycosidase F 26.7 5.6E+02 0.019 26.7 12.4 41 344-386 99-140 (326)
12 2je8_A Beta-mannosidase; glyco 26.3 92 0.0031 36.1 6.8 47 297-370 90-136 (848)
13 1uy4_A Endo-1,4-beta-xylanase 26.2 97 0.0033 28.0 5.7 80 250-331 61-140 (145)
14 3ks7_A Putative putative pngas 26.0 85 0.0029 33.5 5.8 75 311-387 134-212 (397)
15 3pe9_A Fibronectin(III)-like m 21.7 1.1E+02 0.0037 26.2 4.8 43 296-369 29-71 (98)
16 1jz7_A Lactase, beta-galactosi 21.3 1.3E+02 0.0046 35.7 7.0 44 299-369 147-190 (1023)
17 2vzp_A Aocbm35, EXO-beta-D-glu 21.0 1.7E+02 0.0057 25.2 6.0 50 299-369 66-115 (127)
18 3bga_A Beta-galactosidase; NYS 20.4 1.4E+02 0.0048 35.6 6.9 44 299-369 153-196 (1010)
19 1od3_A Putative xylanase; hydr 20.4 1.4E+02 0.0048 27.7 5.7 80 250-331 83-162 (168)
No 1
>3ks7_A Putative putative pngase F; putative peptide:N-glycosidase F (pngase F), structural GENO joint center for structural genomics; 2.30A {Bacteroides fragilis nctc 9343}
Probab=98.65 E-value=2.9e-06 Score=89.57 Aligned_cols=225 Identities=20% Similarity=0.285 Sum_probs=152.5
Q ss_pred cEEEEEEEEEEecccceeEEEEEE-------------C---------------------------CeEeeeeccCCccC-
Q 037376 108 SKIVLEWNATCKGRQFDRIFGVWL-------------G---------------------------GVELLRSCTAEPRA- 146 (612)
Q Consensus 108 s~VvL~l~~t~~G~QyDRl~~v~l-------------~---------------------------gvev~RtSTaEP~~- 146 (612)
..|.|+++..++|.-|||-+.+|| . .+||.|==||.--.
T Consensus 65 ~~v~~~~~~~SnGD~~DktGS~Fvip~~~~~~~l~i~~g~~~~P~~~~~~~~~~~Gii~~~~Y~p~~ElmRf~TpfGvg~ 144 (397)
T 3ks7_A 65 VSVSLKVTLASNGDRWDKSGSCFVLPKSSAINLLTIARDGMKFPSVDSLKLEKMVGIVPGKDYLPTVELMRFMTPFGIGH 144 (397)
T ss_dssp EEEEEEEEEEESSCCSCCEEEEEECCSSCSBCHHHHHTTCCCCCCCCHHHHTTCTTSSCBTTBCCCEEEEEEECCSSTBT
T ss_pred CeEEEEEEEccCCCcccccCCEEEEECccccchhhhhcCcccCCceecCCcceeeeeeecCCCCCcchhhhccccccccc
Confidence 489999999999999999999997 2 47888977765421
Q ss_pred -Cc------------------ceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCCCCCCCCC
Q 037376 147 -TG------------------IVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHE 207 (612)
Q Consensus 147 -~g------------------I~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~~~~~~~~ 207 (612)
++ =.++.+.|||.+.+||+ +...+.+.++|+-. +-|.|+|.+.|+..+.
T Consensus 145 ~~~~~~~~~~k~~pvyi~~W~d~v~W~qDITdL~pLL~--Gev~iGi~i~nW~~----~G~~vSL~l~f~~g~~------ 212 (397)
T 3ks7_A 145 YSNNNDSLSSKRRPVYIPKWESNVTWQQDITDLYPLLE--GEAYVGIYIDTWTS----EGYLVNADIDVKESRL------ 212 (397)
T ss_dssp TCCSSCGGGTTTSCTTCCCCCSCEEEEEECGGGGGGTB--EEEEEEEEECCCSS----SCEEEEEEEEEEECSC------
T ss_pred cccccccchhcCCcccccccccCceEEeEchhhHHhhC--CCeEEEEEeccccc----ccEEEEEEEEEecCCc------
Confidence 11 12567899999999999 45666667776533 3578999999997651
Q ss_pred CCcccccCCCCCCCCEEEeCccCCCCCCCeeEE-eecCCCcceeEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhh
Q 037376 208 YDSDVLASGYGSKADLIWPISRNLPLNDGLWFE-IENSTDIGVKEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIA 286 (612)
Q Consensus 208 ~~~~~~~~~~~~~aD~IiPis~~~~~n~g~~f~-i~n~~d~~~~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~ 286 (612)
.........|+||-... .--|+.|. +-+. ......+++|.|+..|.|-.-++|||.+ .| =++|.
T Consensus 213 -------~~~~~~~~~V~PLfNt~-~~~Gq~Y~d~fn~-k~l~v~Ftlp~~~knv~Lr~itTGHGg~----~g-gdEFc- 277 (397)
T 3ks7_A 213 -------ACDVLPKRHVEPLMNTV-YYMGQSYPDIFAR-RDVSTDFTVPKGAKNIRLKYIVTGHGGH----SG-GDEFV- 277 (397)
T ss_dssp -------TTCBCCCEEEEEEEECC-CCSSCCCCCGGGT-CCEEEEEEECTTCEEEEEEEEEEEECCS----TT-STTTS-
T ss_pred -------chhccccceEEEeeccc-cccCccccchhcc-cceeEEEEcCCCccEEEEEEEEecCCCC----CC-CCccc-
Confidence 11233467899998632 11144553 3344 4456899999999999999999999863 12 13322
Q ss_pred cCCCCCCCCCCCeeEEEEEECCeEEEEEccc-------ceEE--eCCc----------------------------cCCC
Q 037376 287 ANNLTDTPGNGPFREVVVSLDGEVVGAVWPF-------TVVF--TGGI----------------------------NPLL 329 (612)
Q Consensus 287 ~~~~~~~~G~GpfREV~V~iDG~laGv~~Pf-------PvIf--TGGI----------------------------~P~l 329 (612)
.|+=.|+|||.++=.-.|- +..- +|++ +=.-
T Consensus 278 ------------~k~h~v~vdG~~v~~~~pWr~dC~s~r~~Np~sG~W~~~~~a~~~~~~g~~~ke~e~~lsSSDlSRsN 345 (397)
T 3ks7_A 278 ------------QKRNIISVDGKEVLNFIPWRDDCASFRRFNPATGVWLIKRLASYIGEKGYTEKEVEEPLASSDLSRSN 345 (397)
T ss_dssp ------------CCCEEEEETTEEEEEECCCBSCGGGGGGGCTTCCEEEEEEEEEEEETTEEEEEEEEEEEEGGGSCBSS
T ss_pred ------------ceeeEEEECCEEeEEeccccccccccccccCCCCccccccchhhcccccccchhhccccccccccccc
Confidence 3667889999988665543 2221 2221 1234
Q ss_pred ccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-------cccEEEeeEEE
Q 037376 330 WRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA-------LNVWYIDANLH 381 (612)
Q Consensus 330 WrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~-------~~~W~vsgnL~ 381 (612)
|=|=. +.++..|+|.- |.-| .|+|.|.|..| .+.|.|||-|+
T Consensus 346 WCPG~-----~v~p~~i~Lg~----l~~G-~Ht~~v~iP~a~~~~g~~~~~W~VS~~lv 394 (397)
T 3ks7_A 346 WCPGS-----DVVPEEAVIGT----LAPG-KHTFTVSIPEAQAVDGNKLNHWLVSAYLV 394 (397)
T ss_dssp CCTTC-----EECCEEEEEEC----CCSE-EEEEEEECTTCCCCBTTBCCEEEEEEEEE
T ss_pred CCCCc-----ccCceEEeccc----cCCC-ceEEEEECCCCcccCCcccceEEEEEEEe
Confidence 54422 34567777643 3334 89999999854 47999999775
No 2
>3pms_A Peptide:N-glycosidase F; jelly roll fold, N-glycanase, hydrolase; HET: GOL; 1.57A {Elizabethkingia meningoseptica} PDB: 1pgs_A 1pnf_A* 1png_A
Probab=98.40 E-value=5.3e-06 Score=86.05 Aligned_cols=184 Identities=17% Similarity=0.212 Sum_probs=134.4
Q ss_pred eeecccccCCCCeeeeccCCCCCCCCCccEEEEEEEEEEecc---cceeEEEEEE------CCeEeeeeccCCccCC---
Q 037376 80 HHDFAFTYGKPPVLANYTPPSHCSSKKVSKIVLEWNATCKGR---QFDRIFGVWL------GGVELLRSCTAEPRAT--- 147 (612)
Q Consensus 80 ~h~F~nSyg~Pp~~~~YtPP~~c~~~~~s~VvL~l~~t~~G~---QyDRl~~v~l------~gvev~RtSTaEP~~~--- 147 (612)
...||+..++- +.+.++=|.+. .++++|.|.+..+|-|+ -+||.+.|+| .+.||-|==||-=...
T Consensus 19 ~~~~~~~~~~~-a~~~v~lP~~~--~~~~~i~l~~~~sCp~~~C~~WD~~~~v~v~~~~~~~~~ELgRfITPfg~~~~~~ 95 (326)
T 3pms_A 19 KNAFGDGLSQS-AEGTFTFPADV--TAVKTIKMFIKNECPNKTCDEWDRYANVYVKNKTTGEWYEIGRFITPYWVGTEKL 95 (326)
T ss_dssp EECCSTTCCSE-EEEEEEECSCC--TTEEEEEEEEEECCGGGCSCCSCCEEEEEEECTTTCCEEEEEEEECCSSSCSTTS
T ss_pred hhhccCcccce-eEEEEECCccc--ccccEEEEEEEccCCCCCCCCccceeeEEEEeCCCCCcEEEEEeeeccccccccC
Confidence 44699999984 66788877764 58999999999999885 6899999999 6788988777665432
Q ss_pred cceEEEEEehhhhhhhhcccCCeeEEEEECceecceeeeEEEEEEEEEEecCCCCCCCCCCCcccccCCCCCCCCEEEeC
Q 037376 148 GIVWSVKKDLTRYHSLLVKNETQTFAVYLGNLVDSTYTGVYHVDITLYFYPADVDINDHEYDSDVLASGYGSKADLIWPI 227 (612)
Q Consensus 148 gI~Wtv~KDvT~Y~sLf~~~~~~~l~~~L~NiVd~~yTG~f~vtltl~fY~~~~~~~~~~~~~~~~~~~~~~~aD~IiPi 227 (612)
+-.| .-|||.|.+||+ +...|.+..+|..... |.++|.+.|+... + ...+-.|+||
T Consensus 96 ~~~W--~~DVTdl~pLL~--g~~~i~i~~~~w~~~g----~~vsl~f~~~~~~--------~--------~~~~~~v~PL 151 (326)
T 3pms_A 96 PRGL--EIDVTDFKSLLS--GNTELKIYTETWLAKG----REYSVDFDIVYGT--------P--------DYKYSAVVPV 151 (326)
T ss_dssp TTCE--EEECGGGTTTSS--EEEEEEEEECCCSTTC----EEEEEEEEEEESC--------C--------SCSEEEEEEE
T ss_pred CCCC--EEEchhhHHhhc--CCeEEEEEEecccCCC----EEEEEEEEEcCCC--------C--------ccceEEEEee
Confidence 2467 999999999999 4677878777765433 8889999999775 1 1223668999
Q ss_pred ccCC-CCCCCeeEEeecCCCcceeEEecCCCceEEEEEEEeeCCCC-----------ceeeecCCChhhhhcCCCCCCCC
Q 037376 228 SRNL-PLNDGLWFEIENSTDIGVKEFVIPQNVYRAVLEVYVSFHEN-----------DEFWYSNVPNDYIAANNLTDTPG 295 (612)
Q Consensus 228 s~~~-~~n~g~~f~i~n~~d~~~~~v~iP~Nt~rA~lev~asg~~~-----------eEFWYsNvp~~y~~~~~~~~~~G 295 (612)
.... ..-+|..|.....-+ ....+++|.++.+|.|-..++|||. +||=
T Consensus 152 fnt~n~~~~g~~Y~~~d~fn-l~v~ftlp~~~k~a~L~~iiTGHG~~~~~~~d~~gc~EFc------------------- 211 (326)
T 3pms_A 152 VQYNKSSIDGVPYGKAHTLA-LKKNIQLPTNTEKAYLRTTISGWGHAKPYDAGSRGCAEWC------------------- 211 (326)
T ss_dssp EEECSSGGGSEESSSCCCCC-CEEEEECCTTCSEEEEEEEEEEECEEEEEETTTEEEETTS-------------------
T ss_pred ecCCcccccccccCCCcccc-ceEEEecCCccceEEEEEEEecCCCCccCCcCCCCcceec-------------------
Confidence 7531 001123332111112 4688999999999999999999996 4541
Q ss_pred CCCeeEEEEEECCeEEEE
Q 037376 296 NGPFREVVVSLDGEVVGA 313 (612)
Q Consensus 296 ~GpfREV~V~iDG~laGv 313 (612)
.|+=.|+|||.++=.
T Consensus 212 ---~k~H~i~vNG~~vf~ 226 (326)
T 3pms_A 212 ---FRTHTIAINNSNTFQ 226 (326)
T ss_dssp ---CEEEEEEETTEEEEE
T ss_pred ---ceeeEEEECCEEeee
Confidence 478889999987533
No 3
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=58.47 E-value=14 Score=41.08 Aligned_cols=47 Identities=21% Similarity=0.370 Sum_probs=35.6
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcCc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNAL 371 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~~ 371 (612)
...-.|+|||+.||.- -|.|. ++++|||++|- .|+.+.|.|.|.|..
T Consensus 94 ~~~a~V~vNG~~vg~~---------------------~~~~~--p~~~dit~~l~---~G~nn~l~V~v~n~~ 140 (605)
T 3lpf_A 94 THYGKVWVNNQEVMEH---------------------QGGYT--PFEADVTPYVI---AGKSVRITVCVNNEL 140 (605)
T ss_dssp BSEEEEEESSCEEEEE---------------------CCSSS--CEEEECGGGCC---TTSEEEEEEEEECCC
T ss_pred ceEEEEEECCEEEEEE---------------------cCCCC--cceeechhhcc---CCCeEEEEEEEecCC
Confidence 4677899999999942 23333 38999998775 488778999998764
No 4
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=57.40 E-value=16 Score=41.15 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=36.0
Q ss_pred CeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 298 PFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 298 pfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
-...-.|+|||+.||.- .|| | .++++|||++|- .|++..|.|+|.|.
T Consensus 75 v~~~a~V~vNG~~vg~~-------~~~--------------~--~~~~~dit~~l~---~G~~N~l~V~v~~~ 121 (667)
T 3cmg_A 75 VNSIADVFINRKHIGEH-------RGG--------------Y--GAFIFEITDLVK---YGEKNSVLVRANNG 121 (667)
T ss_dssp CBSEEEEEETTEEEEEE-------ECS--------------S--SCEEEECTTTSC---TTSEEEEEEEEECC
T ss_pred ccceeEEEECCEEEeee-------cCC--------------c--ccEEEECCHHHC---CCCCcEEEEEEecC
Confidence 34677899999999963 233 2 248999999874 58788999999875
No 5
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=47.09 E-value=31 Score=39.26 Aligned_cols=47 Identities=21% Similarity=0.265 Sum_probs=35.7
Q ss_pred CeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 298 PFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 298 pfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
-...-.|+|||+.||.- .||- .++++|||++|- .|++..|.|.|.|.
T Consensus 86 v~~~a~V~vNG~~vg~~-------~~g~----------------~~f~~dIt~~l~---~G~~N~l~V~v~~~ 132 (692)
T 3fn9_A 86 VGACAEVYVNGKLAGTH-------KGGY----------------SAFACEIGTALK---LGAENEIIVKADNK 132 (692)
T ss_dssp CBSEEEEEETTEEEEEE-------ECTT----------------SCEEEECGGGCC---TTEEEEEEEEEECC
T ss_pred ccEeeEEEECCEEeeeE-------cCCc----------------ceEEEEChHhcC---CCCceEEEEEEECC
Confidence 35678899999999962 2333 247999998764 48788999999875
No 6
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=43.75 E-value=24 Score=39.19 Aligned_cols=47 Identities=15% Similarity=0.308 Sum_probs=33.7
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCe---eEEEEEEEcCc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKT---HKFGFSVTNAL 371 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~---H~~~i~V~n~~ 371 (612)
.-.-.|+|||+.||.- .| .| .++++|||++|- .|+. +.|.|.|.|..
T Consensus 107 ~~~a~V~vNG~~vg~~-------~~--------------g~--~~~~~dit~~l~---~g~~~~~n~l~V~v~n~~ 156 (613)
T 3hn3_A 107 HSYAIVWVNGVDTLEH-------EG--------------GY--LPFEADISNLVQ---VGPLPSRLRITIAINNTL 156 (613)
T ss_dssp CSEEEEEETTEEEEEE-------ES--------------SS--SCEEEECHHHHC---CC---CCEEEEEEEECCC
T ss_pred ceEEEEEECCEEEeEE-------cC--------------Cc--ceEEEEChhhhc---CCCCCcceEEEEEEeCCC
Confidence 3567899999999961 22 33 248999998764 4765 89999998754
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=43.64 E-value=40 Score=39.51 Aligned_cols=70 Identities=21% Similarity=0.225 Sum_probs=49.5
Q ss_pred eeEEecCCCc-eEEEEEEEeeCCCCceeeecCCChhhhhcCCCCCCCCCCCeeEEEEEECCeEEEEEcccceEEeCCccC
Q 037376 249 VKEFVIPQNV-YRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINP 327 (612)
Q Consensus 249 ~~~v~iP~Nt-~rA~lev~asg~~~eEFWYsNvp~~y~~~~~~~~~~G~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P 327 (612)
.+.+++|+.. .+|+|-|.+-| -| +++|||+.||. .|
T Consensus 27 Rk~f~~~~~~~~~a~l~i~a~g----------------------------~y---~~~iNG~~vg~------------~p 63 (956)
T 2okx_A 27 RGSFDAPASVEGPAMLHITADS----------------------------RY---VLFVNGEQVGR------------GP 63 (956)
T ss_dssp EEEEECCSCCSSCCEEEEEEES----------------------------EE---EEEETTEEEEE------------EC
T ss_pred EEEEECCCCccCceEEEEEecC----------------------------cE---EEEECCEECCC------------CC
Confidence 3678899888 89888777644 13 79999999998 24
Q ss_pred CCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 328 LLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 328 ~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
. |. ..-....-.+||||+|-. |+.+.|++.|-+.
T Consensus 64 ~-~~-----~~~~~~y~~~Dvt~~L~~---G~~N~i~v~~~~~ 97 (956)
T 2okx_A 64 V-RS-----WPKEQFYDSYDIGGQLRP---GVRNTIAVLVLHF 97 (956)
T ss_dssp C-CC-----BTTEEEEEEEECTTTCCT---TSEEEEEEEEEEC
T ss_pred C-cc-----ccccccceEEechhhcCC---CCCcEEEEEEEec
Confidence 4 32 012233467999999854 7678999988653
No 8
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=36.77 E-value=37 Score=39.35 Aligned_cols=46 Identities=20% Similarity=0.458 Sum_probs=34.6
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcCc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNAL 371 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~~ 371 (612)
.....|+|||+.||.- -+.|. ++++|||++|- .|+ +.|.|+|.|..
T Consensus 93 ~~~a~V~vNG~~vG~~---------------------~~g~~--pf~~DIT~~Lk---~G~-N~L~V~V~n~~ 138 (801)
T 3gm8_A 93 YLNSEVWINGHWLGKR---------------------PNGYI--SFVYDLTPYLQ---EGK-NQIAVKVDHSK 138 (801)
T ss_dssp BSCEEEEETTEEEEEE---------------------CCSSC--CEEEECGGGCC---SSE-EEEEEEEEECS
T ss_pred ceEEEEEECCEEeecc---------------------cCCcc--cEEEECcHhcc---CCC-cEEEEEEECCC
Confidence 4567899999999953 12332 47999999873 576 89999999854
No 9
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=31.07 E-value=81 Score=37.70 Aligned_cols=43 Identities=19% Similarity=0.311 Sum_probs=32.2
Q ss_pred eEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 300 REVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 300 REV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
....|+|||+.||.- -| +|. ++++|||++|- +| ++.|.|+|.+
T Consensus 141 ~~a~V~vNG~~vG~~-------~g--------------g~~--p~~~DIT~~lk---~G-~N~L~V~V~~ 183 (1032)
T 3oba_A 141 NCYELYVNGQYVGFN-------KG--------------SRN--GAEFDIQKYVS---EG-ENLVVVKVFK 183 (1032)
T ss_dssp SEEEEEETTEEEEEE-------EC--------------TTS--CEEEECTTTCC---SE-EEEEEEEEES
T ss_pred eeEEEEECCEEEEEE-------eC--------------Ccc--cEEEEChhhcc---CC-cEEEEEEEEC
Confidence 467899999999952 23 332 37999999764 45 6799999975
No 10
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=28.54 E-value=3.7e+02 Score=25.12 Aligned_cols=61 Identities=10% Similarity=0.007 Sum_probs=40.5
Q ss_pred CCCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcCcccEE
Q 037376 296 NGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNALNVWY 375 (612)
Q Consensus 296 ~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~~~~W~ 375 (612)
+|.-..|++++||+++|...- .+|.+.+++ +.+| .|+|.++..+...+--
T Consensus 28 d~~V~~Ve~~~dg~~v~~~t~-------------------------~~ys~~~~~----~~~G-~htlta~A~D~aGn~s 77 (190)
T 3pdd_A 28 KTPVSKVEFYNGDTLISSDTT-------------------------APYTAKITG----AAVG-AYNLKAVAVLSDGRRI 77 (190)
T ss_dssp SSCEEEEEEEETTEEEEEECS-------------------------SSEEEEECS----CCSE-EEEEEEEEEETTSCEE
T ss_pred CCCEEEEEEEECCEEEccccC-------------------------CceEEEecc----CCCc-cEEEEEEEEECCCCEe
Confidence 345789999999999997531 225555554 2355 8999999987665554
Q ss_pred EeeEEEEEEeC
Q 037376 376 IDANLHLWLDG 386 (612)
Q Consensus 376 vsgnL~lwlD~ 386 (612)
.+..+-+-++.
T Consensus 78 ~s~~v~vtV~~ 88 (190)
T 3pdd_A 78 ESPVTPVLVKV 88 (190)
T ss_dssp ECCCEEEEEEC
T ss_pred eecceeEEecc
Confidence 45444454553
No 11
>3pms_A Peptide:N-glycosidase F; jelly roll fold, N-glycanase, hydrolase; HET: GOL; 1.57A {Elizabethkingia meningoseptica} PDB: 1pgs_A 1pnf_A* 1png_A
Probab=26.75 E-value=5.6e+02 Score=26.69 Aligned_cols=41 Identities=10% Similarity=0.094 Sum_probs=28.0
Q ss_pred eeEEcccccccccCCCeeEEEEEEEcC-cccEEEeeEEEEEEeC
Q 037376 344 YDIEITPFLGNLLDGKTHKFGFSVTNA-LNVWYIDANLHLWLDG 386 (612)
Q Consensus 344 y~iDlTPfLp~L~DG~~H~~~i~V~n~-~~~W~vsgnL~lwlD~ 386 (612)
...|||+|+|+|- +.-+|+|...+= ..-|.++.++-+-.+.
T Consensus 99 W~~DVTdl~pLL~--g~~~i~i~~~~w~~~g~~vsl~f~~~~~~ 140 (326)
T 3pms_A 99 LEIDVTDFKSLLS--GNTELKIYTETWLAKGREYSVDFDIVYGT 140 (326)
T ss_dssp EEEECGGGTTTSS--EEEEEEEEECCCSTTCEEEEEEEEEEESC
T ss_pred CEEEchhhHHhhc--CCeEEEEEEecccCCCEEEEEEEEEcCCC
Confidence 3999999999996 345666654432 2447788887765544
No 12
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=26.26 E-value=92 Score=36.13 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=35.2
Q ss_pred CCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC
Q 037376 297 GPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA 370 (612)
Q Consensus 297 GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~ 370 (612)
|-...-.|+|||+.+|... || | .++++|||++|- .| ++.|.|.|.|.
T Consensus 90 gv~~~a~V~vNG~~vg~~~-------~~--------------~--~~~~~dIt~~l~---~G-~N~L~V~v~~~ 136 (848)
T 2je8_A 90 GLDTYADVYLNGSLLLKAD-------NM--------------F--VGYTLPVKSVLR---KG-ENHLYIYFHSP 136 (848)
T ss_dssp CCBSEEEEEETTEEEEEEC-------BT--------------T--CCEEEECGGGCC---SE-EEEEEEEEECH
T ss_pred CCCceeEEEECCEEecccc-------CC--------------C--CCEEEcChHhhc---CC-CcEEEEEEeCc
Confidence 3456789999999999752 32 2 248999999764 46 58999999874
No 13
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=26.18 E-value=97 Score=27.98 Aligned_cols=80 Identities=10% Similarity=0.090 Sum_probs=42.8
Q ss_pred eEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhhcCCCCCCCCCCCeeEEEEEECCeEEEEEcccceEEeCCccCCC
Q 037376 250 KEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLL 329 (612)
Q Consensus 250 ~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~~~~~~~~~G~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~l 329 (612)
+.+.++.++++..+.|...+.+.=|.+-..+-...+...+.....|-..|++|...|.. ..|+--=| ++|+|++|-.+
T Consensus 61 ~~vdf~~G~~~~~~rvas~~gg~ievrlds~~G~~lgt~~v~~Tggw~~w~tv~~~v~~-~~G~h~ly-l~f~g~~nl~~ 138 (145)
T 1uy4_A 61 SNIDFGSGATGFSATVATEVNTSIQIRSDSPTGTLLGTLYVSSTGSWNTYNTVSTNISK-ITGVHDIV-LVFSGPVNVDN 138 (145)
T ss_dssp EEEECTTCEEEEEEEEECSSCEEEEEEESSTTSCEEEEEEECCCSSTTCCEEEEEEEEE-ECSEEEEE-EEESSCCEEEE
T ss_pred EEEEcCCCCEEEEEEEEeCCCcEEEEEECCCCCcEEEEEEecCCCCCcccEEEEEEecC-CCceEEEE-EEEeCCeEEEE
Confidence 35778778888777775444444466654432222222222111234467777777653 55655433 56677655555
Q ss_pred cc
Q 037376 330 WR 331 (612)
Q Consensus 330 Wr 331 (612)
|+
T Consensus 139 ~~ 140 (145)
T 1uy4_A 139 FI 140 (145)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 14
>3ks7_A Putative putative pngase F; putative peptide:N-glycosidase F (pngase F), structural GENO joint center for structural genomics; 2.30A {Bacteroides fragilis nctc 9343}
Probab=26.03 E-value=85 Score=33.55 Aligned_cols=75 Identities=15% Similarity=0.091 Sum_probs=48.7
Q ss_pred EEEEcccceEEeCCcc--CCC-ccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEcC-cccEEEeeEEEEEEeC
Q 037376 311 VGAVWPFTVVFTGGIN--PLL-WRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTNA-LNVWYIDANLHLWLDG 386 (612)
Q Consensus 311 aGv~~PfPvIfTGGI~--P~l-WrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n~-~~~W~vsgnL~lwlD~ 386 (612)
.=...||=|=|-.+++ |.. =||+-=..==|--+++.|||+|+|+|-+ +-.+++.+.+= ..-|.+|.+|-+....
T Consensus 134 mRf~TpfGvg~~~~~~~~~~~k~~pvyi~~W~d~v~W~qDITdL~pLL~G--ev~iGi~i~nW~~~G~~vSL~l~f~~g~ 211 (397)
T 3ks7_A 134 MRFMTPFGIGHYSNNNDSLSSKRRPVYIPKWESNVTWQQDITDLYPLLEG--EAYVGIYIDTWTSEGYLVNADIDVKESR 211 (397)
T ss_dssp EEEECCSSTBTTCCSSCGGGTTTSCTTCCCCCSCEEEEEECGGGGGGTBE--EEEEEEEECCCSSSCEEEEEEEEEEECS
T ss_pred hhccccccccccccccccchhcCCcccccccccCceEEeEchhhHHhhCC--CeEEEEEecccccccEEEEEEEEEecCC
Confidence 3456788776655553 111 1343322222445699999999999865 46777666654 4689999999988755
Q ss_pred C
Q 037376 387 R 387 (612)
Q Consensus 387 ~ 387 (612)
.
T Consensus 212 ~ 212 (397)
T 3ks7_A 212 L 212 (397)
T ss_dssp C
T ss_pred c
Confidence 3
No 15
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=21.74 E-value=1.1e+02 Score=26.20 Aligned_cols=43 Identities=26% Similarity=0.456 Sum_probs=30.8
Q ss_pred CCCeeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 296 NGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 296 ~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
.|.-+.|++++||.++|... |+ +|.++.++- .| .|+|..+.++
T Consensus 29 dg~V~kVef~vdg~~vg~dt--------------~a-----------py~~~w~~~-----~G-~htl~a~AtD 71 (98)
T 3pe9_A 29 DGKISRVDFLVDGEVIGSDR--------------EA-----------PYEYEWKAV-----EG-NHEISVIAYD 71 (98)
T ss_dssp SSCEEEEEEEETTEEEEEEC--------------SS-----------SEEEEEECC-----SE-EEEEEEEEEE
T ss_pred CCCEEEEEEEECCEEecccc--------------cC-----------CEEEEEEcC-----Cc-cEEEEEEEEE
Confidence 56789999999999987642 33 366766654 34 6888887764
No 16
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=21.33 E-value=1.3e+02 Score=35.73 Aligned_cols=44 Identities=16% Similarity=0.232 Sum_probs=32.8
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
.....|+|||+.||.- .|| |. ++++|||++|- .|+ ..|.|.|.+
T Consensus 147 ~~~a~V~vNG~~vG~~-------~gg--------------~~--p~~~DIT~~L~---~G~-N~L~V~V~~ 190 (1023)
T 1jz7_A 147 NSAFHLWCNGRWVGYG-------QDS--------------RL--PSEFDLSAFLR---AGE-NRLAVMVLR 190 (1023)
T ss_dssp ESEEEEEETTEEEEEE-------ECT--------------TS--CEEEECTTTCC---SEE-EEEEEEEES
T ss_pred CcceEEEECCEEEccc-------cCC--------------CC--ceEEecHhhcc---CCC-cEEEEEEEe
Confidence 3467899999999964 233 22 48999999874 474 799999963
No 17
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=21.00 E-value=1.7e+02 Score=25.23 Aligned_cols=50 Identities=24% Similarity=0.333 Sum_probs=32.4
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
-|.+.|+|||..++....||- ||+++ -|.-+ +..|. |-.| .|+|.|....
T Consensus 66 ~~~~~l~VnG~~~~~~v~~p~--tg~W~--~w~~~---------~~~v~-------L~aG-~ntI~l~~~~ 115 (127)
T 2vzp_A 66 SRPLDFSVNGSISASGVAFGS--TGTWP--AWTTK---------TVRVT-------LAAG-VNKIKAVATT 115 (127)
T ss_dssp CCCEEEEETTEEEEEEECCCC--CSSTT--CCEEE---------EEEEE-------ECSE-EEEEEEEECS
T ss_pred CeEEEEEECCEEeeeEEEecC--CCCCC--ceEEE---------EEEEE-------ECCC-ceEEEEEEeC
Confidence 489999999998865566653 78776 25432 11222 3335 6999998753
No 18
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=20.41 E-value=1.4e+02 Score=35.58 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=32.8
Q ss_pred eeEEEEEECCeEEEEEcccceEEeCCccCCCccccccCCCCCCCceeEEcccccccccCCCeeEEEEEEEc
Q 037376 299 FREVVVSLDGEVVGAVWPFTVVFTGGINPLLWRPITAIGSFDLPTYDIEITPFLGNLLDGKTHKFGFSVTN 369 (612)
Q Consensus 299 fREV~V~iDG~laGv~~PfPvIfTGGI~P~lWrPI~~igAFdlp~y~iDlTPfLp~L~DG~~H~~~i~V~n 369 (612)
.....|+|||+.||.- .||-. ++++|||++|- .|+ ..|.|.|.+
T Consensus 153 ~~~a~V~vNG~~vG~~-------~gg~~----------------p~~~DIT~~L~---~G~-N~L~V~V~~ 196 (1010)
T 3bga_A 153 ISFYYVWVNGKLLGYN-------QGSKT----------------AAEWDITDVLS---EGE-NVVALEVYR 196 (1010)
T ss_dssp ESEEEEEETTEEEEEE-------ECSSS----------------CEEEECGGGCC---SSE-EEEEEEEES
T ss_pred CceeEEEECCEEEeeE-------eCCCC----------------cceeehhhhcc---CCC-cEEEEEEEe
Confidence 4567899999999964 23322 47999998764 474 799999964
No 19
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=20.38 E-value=1.4e+02 Score=27.68 Aligned_cols=80 Identities=13% Similarity=0.137 Sum_probs=43.8
Q ss_pred eEEecCCCceEEEEEEEeeCCCCceeeecCCChhhhhcCCCCCCCCCCCeeEEEEEECCeEEEEEcccceEEeCCccCCC
Q 037376 250 KEFVIPQNVYRAVLEVYVSFHENDEFWYSNVPNDYIAANNLTDTPGNGPFREVVVSLDGEVVGAVWPFTVVFTGGINPLL 329 (612)
Q Consensus 250 ~~v~iP~Nt~rA~lev~asg~~~eEFWYsNvp~~y~~~~~~~~~~G~GpfREV~V~iDG~laGv~~PfPvIfTGGI~P~l 329 (612)
+.+.++.++++..+.|...+.+.=|.+...+-...+...+.....|-..|++|...|.. .+|+-.=| ++|+|++|-.+
T Consensus 83 ~~vdfg~G~~~~~~rvas~~~G~ievrlds~~G~~lgt~~vp~Tggw~~w~tvt~~v~~-~~G~hdLy-lvf~G~~nldw 160 (168)
T 1od3_A 83 KNIDFGDGATSVTARVATQNATTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISN-TAGVKDIV-LVFSGPVNVDW 160 (168)
T ss_dssp EEEECTTCEEEEEEEEECSSCEEEEEEESSTTSCEEEEEEECCCSSTTCCEEEEEEEEE-ECSEEEEE-EEESSCCEEEE
T ss_pred EeEEeCCCcEEEEEEEEcCCCcEEEEEECCCCCcEEEEEEeCCCCCCcccEEEEEEEcC-CCcEEEEE-EEEECCcEEEE
Confidence 35778778888777775544444466654432122222111111234467888777753 56654433 56777766555
Q ss_pred cc
Q 037376 330 WR 331 (612)
Q Consensus 330 Wr 331 (612)
|+
T Consensus 161 ~~ 162 (168)
T 1od3_A 161 FV 162 (168)
T ss_dssp EE
T ss_pred EE
Confidence 54
Done!