Query 037378
Match_columns 741
No_of_seqs 166 out of 1153
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 19:57:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037378.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037378hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j4na_ f.19.1.1 (A:) Aquapori 5.5 5.8E+02 0.042 22.6 7.4 19 532-550 100-118 (249)
2 d2axtl1 f.23.31.1 (L:1-37) Pho 5.5 2E+02 0.015 18.3 2.5 15 448-462 18-32 (37)
3 d1ymga1 f.19.1.1 (A:6-239) Aqu 4.6 2.7E+02 0.02 24.9 4.1 19 532-550 85-103 (234)
4 d1q90m_ f.23.25.1 (M:) PetM su 3.9 2.9E+02 0.021 16.9 2.4 14 686-699 2-15 (34)
5 d1zava1 d.58.62.1 (A:1-177) Ri 3.9 3.5E+02 0.025 23.0 4.0 30 519-548 127-156 (177)
6 d1ansa_ g.11.1.1 (A:) Neurotox 3.6 2.4E+02 0.017 16.4 1.6 10 720-729 15-24 (27)
7 d1xn7a_ a.4.5.62 (A:) Hypothet 3.3 2.5E+02 0.018 21.1 1.9 14 720-733 54-67 (78)
8 d2axtt1 f.23.34.1 (T:1-30) Pho 3.0 5.5E+02 0.04 15.1 3.1 18 365-382 4-21 (30)
9 d3dtua1 f.24.1.1 (A:14-551) Ba 2.8 1.9E+03 0.14 21.4 12.0 34 522-555 323-356 (538)
10 d1q90l_ f.23.24.1 (L:) PetL su 2.6 4E+02 0.029 16.0 2.0 18 65-82 8-25 (32)
No 1
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.54 E-value=5.8e+02 Score=22.61 Aligned_cols=19 Identities=26% Similarity=0.403 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037378 532 FIAQITGTIISSLVGYATS 550 (741)
Q Consensus 532 f~aQliGtivg~~v~~~v~ 550 (741)
..+|++|.++|+.+...++
T Consensus 100 i~aQ~lGa~~g~~~~~~~~ 118 (249)
T d1j4na_ 100 IIAQCVGAIVATAILSGIT 118 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred eeHHHHHHHHHHhhheeec
Confidence 3689999999988776654
No 2
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.52 E-value=2e+02 Score=18.29 Aligned_cols=15 Identities=53% Similarity=0.941 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHH
Q 037378 448 YWGILLACLLALIFI 462 (741)
Q Consensus 448 ~w~~ilal~la~v~~ 462 (741)
+|++++..+++.+|+
T Consensus 18 y~GlLlifvl~vLFs 32 (37)
T d2axtl1 18 YLGLLLILVLALLFS 32 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555555544
No 3
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.63 E-value=2.7e+02 Score=24.89 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037378 532 FIAQITGTIISSLVGYATS 550 (741)
Q Consensus 532 f~aQliGtivg~~v~~~v~ 550 (741)
..+|++|.++|+.+...++
T Consensus 85 i~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 85 MVAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred eehHHHHHHHHHHHHHHHc
Confidence 3799999999998876654
No 4
>d1q90m_ f.23.25.1 (M:) PetM subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=3.94 E-value=2.9e+02 Score=16.93 Aligned_cols=14 Identities=7% Similarity=-0.187 Sum_probs=10.0
Q ss_pred hhhhhhhHHHHHHH
Q 037378 686 YGLDMRVAFLSLLT 699 (741)
Q Consensus 686 AgL~aG~~i~glii 699 (741)
|++++|+++.-+-+
T Consensus 2 a~fiagta~tmig~ 15 (34)
T d1q90m_ 2 AEFIAGTALTMVGM 15 (34)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CceecchhHHHHHH
Confidence 67888888765543
No 5
>d1zava1 d.58.62.1 (A:1-177) Ribosomal protein L10 {Thermotoga maritima [TaxId: 2336]}
Probab=3.87 E-value=3.5e+02 Score=23.02 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=23.8
Q ss_pred hhhHhcCCChHHHHHHHHHHHHHHHHHHHH
Q 037378 519 KMAHYMKIAPKSMFIAQITGTIISSLVGYA 548 (741)
Q Consensus 519 K~Ghy~k~pPR~~f~aQliGtivg~~v~~~ 548 (741)
++-.+.++|.|...++|++|.+-+..-+.+
T Consensus 127 ~i~~la~LPs~eel~a~l~~~L~ap~~~l~ 156 (177)
T d1zava1 127 EVENIAKLPSKEELYAMLVGRVKAPITGLV 156 (177)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhHHHHHH
Confidence 344788899999999999999887665443
No 6
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=3.57 E-value=2.4e+02 Score=16.36 Aligned_cols=10 Identities=20% Similarity=0.600 Sum_probs=4.6
Q ss_pred CCCCCCCCCC
Q 037378 720 DHCPLAQCPT 729 (741)
Q Consensus 720 ~~c~~~~~~~ 729 (741)
+.|....|++
T Consensus 15 qncypegcsg 24 (27)
T d1ansa_ 15 QNCYPEGCSG 24 (27)
T ss_dssp CSSCSSCSSS
T ss_pred cccccCcccC
Confidence 3444444543
No 7
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=3.31 E-value=2.5e+02 Score=21.06 Aligned_cols=14 Identities=29% Similarity=0.626 Sum_probs=11.6
Q ss_pred CCCCCCCCCCCCcc
Q 037378 720 DHCPLAQCPTAPGI 733 (741)
Q Consensus 720 ~~c~~~~~~~~~~~ 733 (741)
++|-.++|+.||-.
T Consensus 54 ~gCLsGsCKsCPEg 67 (78)
T d1xn7a_ 54 DGCLSGSCKSCPEG 67 (78)
T ss_dssp CCCCCSSCCCCCCC
T ss_pred cccccCCCCCCCCc
Confidence 68999999998853
No 8
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=2.97 E-value=5.5e+02 Score=15.15 Aligned_cols=18 Identities=28% Similarity=0.467 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 037378 365 FSVGFDFACLSASLSLFL 382 (741)
Q Consensus 365 l~~~~~fa~~~~~i~~~~ 382 (741)
++|..-||++.+...+..
T Consensus 4 i~yv~ifac~i~lfffai 21 (30)
T d2axtt1 4 ITYVFIFACIIALFFFAI 21 (30)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHHHH
Confidence 456667888876655444
No 9
>d3dtua1 f.24.1.1 (A:14-551) Bacterial aa3 type cytochrome c oxidase subunit I {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=2.83 E-value=1.9e+03 Score=21.44 Aligned_cols=34 Identities=9% Similarity=0.106 Sum_probs=26.1
Q ss_pred HhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037378 522 HYMKIAPKSMFIAQITGTIISSLVGYATSWWLLS 555 (741)
Q Consensus 522 hy~k~pPR~~f~aQliGtivg~~v~~~v~~~ll~ 555 (741)
+..+.||..+......-.+++.--...+++|+..
T Consensus 323 f~~g~~~~~~~~f~~~T~~IaiPs~i~vfnwl~T 356 (538)
T d3dtua1 323 YTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIAT 356 (538)
T ss_dssp TTSSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889888888777777788778888888654
No 10
>d1q90l_ f.23.24.1 (L:) PetL subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=2.64 E-value=4e+02 Score=16.02 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=13.5
Q ss_pred hhhHHHHHHHHHHhhhcc
Q 037378 65 LGPITCAALAFVQQFFDY 82 (741)
Q Consensus 65 lG~i~~~~~~a~n~~f~l 82 (741)
+|+++++++-....|+|+
T Consensus 8 vglligal~~tlgiylgl 25 (32)
T d1q90l_ 8 VGLLIGALVFTLGIYLGL 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 577888887777777765
Done!