BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037386
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6H5X0|RIP2_ORYSJ Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica
GN=Os02g0637000 PE=3 SV=1
Length = 192
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 111/185 (60%), Gaps = 14/185 (7%)
Query: 12 LVIVSIVFL------VTYGSVEAGTCKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIY 65
LV+VS+ L G AG C PSG +R + Q DCCK G+ Y Y
Sbjct: 15 LVLVSLPGLSRGDVDARRGRELAGGCNPSGTLRPSRSHSCQ-------DCCKAGRSYPTY 67
Query: 66 RCSPPVTGHTKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYI 125
CSP TG TKA +T+N FE G+GG PSECD K+H + + VVALSTGWY G RC I
Sbjct: 68 ACSPATTGSTKAVMTLNDFEAGGDGGDPSECDGKFHKNTERVVALSTGWYANGRRCNKNI 127
Query: 126 NIYGNGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSR-GELDI 184
I NG+SV AKVVDECDS GCD H YQPPC N+VD S+AVW AL + GE DI
Sbjct: 128 RINANGRSVLAKVVDECDSLHGCDKEHAYQPPCRPNVVDASQAVWDALRITGEDVGEYDI 187
Query: 185 HWSDA 189
WSDA
Sbjct: 188 TWSDA 192
>sp|Q9M4H4|GRI22_VITVI Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2
SV=1
Length = 220
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
Query: 56 CKEGKLYTIYRCSPPVTGHTKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWY 115
CK GK Y CSPP+T T A LT N+FEK G+GGGPS CDNKYH + + +VALSTGWY
Sbjct: 86 CKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVALSTGWY 145
Query: 116 NKGSRCLNYINIYG-NGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALG 174
N GSRC I I NG+SV AKVVDECDS GCD H QPPC NNIVDGS AVW ALG
Sbjct: 146 NGGSRCGKMIRITAQNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNAVWNALG 205
Query: 175 VPTSRGELDIHWSDA 189
+ + GE+D+ WS A
Sbjct: 206 LDINIGEVDVTWSMA 220
>sp|Q7XVA8|RIP1_ORYSJ Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica
GN=Os04g0364800 PE=3 SV=2
Length = 183
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 10 IILVIVSIVFLVTYG-SVEAGTCKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIYRCS 68
+ L I +V + G S G C PSG IR Q DCCK G+ Y Y CS
Sbjct: 8 LALAIAGVVLVSLPGLSRGDGECNPSGAIRSSTTHRCQ-------DCCKAGQSYPTYTCS 60
Query: 69 PPVTGH-TKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYINI 127
PP TG T A +T+N F+ G+GGGPSECD YHS+ + VVALSTGWY GSRC + I
Sbjct: 61 PPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCGKSVRI 120
Query: 128 YGNGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVP-TSRGELDIHW 186
NG+SV AKVVDECDS GCD H YQPPC N+VD S+AVW ALG+ GE DI W
Sbjct: 121 NANGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGEYDITW 180
Query: 187 SDA 189
SDA
Sbjct: 181 SDA 183
>sp|P84527|KIWEL_ACTDE Kiwellin OS=Actinidia deliciosa PE=1 SV=1
Length = 189
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 103/169 (60%), Gaps = 19/169 (11%)
Query: 22 TYGSVEAGTCKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIYRCSPPVTGHTKATLTI 81
T S + G CKPSG + + GK Y Y CSPPVT T A LT
Sbjct: 39 TTHSHQPGGCKPSGTLTCR------------------GKSYPTYDCSPPVTSSTPAKLTN 80
Query: 82 NSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYINIYG-NGKSVKAKVVD 140
N F + G+ GGPSECD YH++++ +VALSTGWYN GSRC I I NGKSV AKVVD
Sbjct: 81 NDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRCGKMIRITASNGKSVSAKVVD 140
Query: 141 ECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSRGELDIHWSDA 189
ECDS GCD H QPPC NNIVDGS AVW ALG+ + G +DI WS A
Sbjct: 141 ECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVGVVDITWSMA 189
>sp|Q9FWU1|RIP4_ORYSJ Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica
GN=Os10g0490666 PE=3 SV=2
Length = 216
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 110/163 (67%), Gaps = 8/163 (4%)
Query: 31 CKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIYRCSPPVTGH--TKATLTINSFEKNG 88
C SG + GK G+CN+ + SDCC G+ Y +RCSPPV+ T ATLT+NSF + G
Sbjct: 56 CHISGFLHGKA---GKCNRAHGSDCCVTGRRYPQFRCSPPVSSARPTPATLTLNSFARGG 112
Query: 89 EGGGPSECDNKYHSDDDPVVALSTGWY--NKGSRCLNYINIY-GNGKSVKAKVVDECDST 145
+GGG S CD ++H D VVALS+GW + SRC I + GNG+S A+VVDECDS
Sbjct: 113 DGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECDSV 172
Query: 146 VGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSRGELDIHWSD 188
GCD+ H+++PPCPN++VDGS AVWKALG+ GE + WSD
Sbjct: 173 NGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGEFKVTWSD 215
>sp|Q9FWT5|RIP3_ORYSJ Ripening-related protein 3 OS=Oryza sativa subsp. japonica
GN=Os10g0490100 PE=2 SV=1
Length = 213
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 19 FLVTYGSVEAGTCKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIYRCSPPVTGH---T 75
F +++ +C+PSG I G G CN +N S+CC++G Y Y CSPPV T
Sbjct: 42 FFPHRSLLQSSSCQPSGAITGTS---GDCNADNGSECCQDGVQYMTYACSPPVAAGGTGT 98
Query: 76 KATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYINIYGNG-KSV 134
A LT+NSF G+GGG C +++ D VVALSTGW++ SRC + I +G SV
Sbjct: 99 AALLTLNSFADGGDGGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEKDVVIRASGGASV 158
Query: 135 KAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSRGELDIHWSDA 189
A VVDECDS GCDS H+++PPC NNIVDGS AVW ALG+ GE I WSDA
Sbjct: 159 TAMVVDECDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGEAQITWSDA 213
>sp|Q8LN49|RIP5_ORYSJ Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica
GN=Os10g0490500 PE=3 SV=1
Length = 276
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 106/184 (57%), Gaps = 24/184 (13%)
Query: 7 ASNIILVIVSIVFLVT-YGSVEAGTCKPSGKIRGKKPPPGQCNKENNSDCCKEGKLYTIY 65
A +L +S L + V AG C+PSG + GK G C K N+ DCC++GK Y Y
Sbjct: 2 AMIFLLAALSTTHLASSLRPVAAGACRPSGYLPGKS---GNCEKSNDPDCCEDGKAYPQY 58
Query: 66 RCSPPVTGHTKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYI 125
R FEK +GGGPSECDN YHSD + VVALSTGW+ +RC + +
Sbjct: 59 R-----------------FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGTARCGHRV 101
Query: 126 NIY---GNGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSRGEL 182
I G G+SV AKVVDECDS GCD H+Y+ PC NNIVD S AVW ALG+ + G
Sbjct: 102 RITASGGGGRSVVAKVVDECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGLDKNVGME 161
Query: 183 DIHW 186
I W
Sbjct: 162 HITW 165
>sp|Q7XD65|RIP7_ORYSJ Putative ripening-related protein 7 OS=Oryza sativa subsp. japonica
GN=Os10g0489400 PE=3 SV=1
Length = 162
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 20/122 (16%)
Query: 77 ATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCLNYINI--------- 127
A +T+N FEK +GGGP+ CD YHSD + +VALST W+ G RC I I
Sbjct: 50 AVMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRG 109
Query: 128 -YGNGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSRGELDIHW 186
G ++V+A VVDECDS G C +++VD S AVW+ALG+ T GE+ + W
Sbjct: 110 GGGGRRAVEATVVDECDSRRG----------CKDDVVDSSPAVWRALGLDTDSGEVRVTW 159
Query: 187 SD 188
SD
Sbjct: 160 SD 161
>sp|Q7XD66|RIP6_ORYSJ Putative ripening-related protein 6 OS=Oryza sativa subsp. japonica
GN=Os10g0489301 PE=3 SV=1
Length = 167
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 13/130 (10%)
Query: 64 IYRCSPPVTGH--TKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRC 121
+ RCS P T A +T+N FE+ +GGGP+ CD +YHSD V ALSTGW+ G RC
Sbjct: 47 MRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRC 106
Query: 122 LNYINIYG--NGKSVKAKVVDECDSTVGCDSVHDYQPPCPNNIVDGSKAVWKALGVPTSR 179
I I NG+SV A VVDECDS G C ++IVD S AVW ALG+ T+
Sbjct: 107 HRGIRITSRQNGRSVVATVVDECDSRHG---------GCKDDIVDTSAAVWSALGLDTNV 157
Query: 180 GELDIHWSDA 189
GE+ + WSDA
Sbjct: 158 GEVPVTWSDA 167
>sp|Q6INA9|SETB1_XENLA Histone-lysine N-methyltransferase SETDB1 OS=Xenopus laevis
GN=setdb1 PE=2 SV=1
Length = 1269
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 90 GGGPSECDNKYHSDDDPVVALS------TGWYNKGSRCLNYINIYGNGKSVKAKVVDECD 143
G + N D D VV + T ++KG+ L I G GK K K ++
Sbjct: 176 GSNQASASNDMSKDGDLVVGMRILGKKRTKTWHKGT--LISIQCVGTGKKFKVKFDNKGK 233
Query: 144 STVGCDSV-HDYQPPCPNNIVDGSKAVWK 171
S + + + +DY PP P N+ GS+ V K
Sbjct: 234 SLLSGNHIAYDYHPP-PENLTVGSRVVAK 261
>sp|Q12L09|META_SHEDO Homoserine O-succinyltransferase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=metA PE=3
SV=1
Length = 314
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 71 VTGH---TKATLTINSFEKNGEGGGPSECDNKYHSDDDPVVALSTGWYNKGSRCL-NYIN 126
VTGH K TL + EG PS N Y DDDP + W++ GS + N++N
Sbjct: 232 VTGHPEYQKGTLRDEFIRDSQEGLNPSVPCN-YFRDDDPEQDIIARWHSHGSLLVSNWLN 290
Query: 127 IY 128
Y
Sbjct: 291 YY 292
>sp|P40775|YDJM_BACSU Uncharacterized protein YdjM OS=Bacillus subtilis (strain 168)
GN=ydjM PE=2 SV=2
Length = 123
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 158 CPNNIVDGSKAVWKALGVPTSRGELDIHWS 187
PN ++D S +KALG P S+G++ H+S
Sbjct: 93 MPNAVLDVSPKAFKALGYPLSKGKVAGHYS 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,765,166
Number of Sequences: 539616
Number of extensions: 3657397
Number of successful extensions: 4792
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4765
Number of HSP's gapped (non-prelim): 19
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)