Query 037387
Match_columns 279
No_of_seqs 285 out of 2157
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 11:43:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037387.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037387hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00903 2A0129 major facilit 99.4 4.3E-12 9.4E-17 115.6 14.8 128 3-153 18-145 (368)
2 KOG1330 Sugar transporter/spin 99.4 5.3E-13 1.1E-17 121.3 7.3 176 5-190 277-453 (493)
3 COG2814 AraJ Arabinose efflux 99.4 9.6E-12 2.1E-16 112.7 14.5 128 4-153 41-168 (394)
4 TIGR00900 2A0121 H+ Antiporter 99.4 1.7E-11 3.6E-16 109.8 15.5 135 2-153 25-159 (365)
5 TIGR01299 synapt_SV2 synaptic 99.4 1.6E-11 3.4E-16 120.6 15.8 127 4-152 195-321 (742)
6 TIGR00893 2A0114 d-galactonate 99.4 9.5E-12 2.1E-16 112.1 13.1 129 3-153 21-149 (399)
7 TIGR00891 2A0112 putative sial 99.3 2.5E-11 5.4E-16 110.5 15.0 125 3-148 39-163 (405)
8 PRK03545 putative arabinose tr 99.3 2.9E-11 6.3E-16 110.5 15.0 129 3-153 36-164 (390)
9 TIGR00894 2A0114euk Na(+)-depe 99.3 2.8E-11 6.1E-16 113.3 14.9 130 5-153 70-199 (465)
10 PRK10213 nepI ribonucleoside t 99.3 3.2E-11 7E-16 110.7 14.7 129 3-153 47-175 (394)
11 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.5E-11 7.5E-16 111.2 14.8 123 3-146 35-157 (412)
12 PRK11663 regulatory protein Uh 99.3 4.1E-11 8.8E-16 111.4 15.3 129 3-153 50-178 (434)
13 PF07690 MFS_1: Major Facilita 99.3 1.3E-11 2.9E-16 110.0 11.5 129 3-153 24-152 (352)
14 PRK11102 bicyclomycin/multidru 99.3 5.9E-11 1.3E-15 107.6 15.2 129 3-153 18-146 (377)
15 TIGR00895 2A0115 benzoate tran 99.3 4.4E-11 9.5E-16 108.4 14.3 129 3-153 44-172 (398)
16 PRK12382 putative transporter; 99.3 3.7E-11 8.1E-16 109.8 13.8 134 4-152 44-178 (392)
17 TIGR00710 efflux_Bcr_CflA drug 99.3 8.7E-11 1.9E-15 106.4 15.6 129 3-153 32-160 (385)
18 TIGR00711 efflux_EmrB drug res 99.3 2.5E-11 5.5E-16 113.6 12.3 129 3-153 29-157 (485)
19 PRK10054 putative transporter; 99.3 1.6E-10 3.5E-15 106.2 17.1 127 4-153 36-162 (395)
20 KOG2532 Permease of the major 99.3 1E-10 2.2E-15 109.3 15.7 130 5-153 67-196 (466)
21 COG2271 UhpC Sugar phosphate p 99.3 1.3E-11 2.9E-16 111.2 8.6 129 3-153 56-186 (448)
22 PRK11551 putative 3-hydroxyphe 99.3 1.2E-10 2.7E-15 106.7 15.1 128 3-152 42-169 (406)
23 PRK12307 putative sialic acid 99.3 9.4E-11 2E-15 108.1 14.4 128 4-153 46-173 (426)
24 PRK05122 major facilitator sup 99.3 6.6E-11 1.4E-15 108.3 13.0 132 4-152 44-178 (399)
25 TIGR00892 2A0113 monocarboxyla 99.3 6.8E-11 1.5E-15 110.7 13.1 132 3-153 268-401 (455)
26 TIGR00712 glpT glycerol-3-phos 99.3 9.7E-11 2.1E-15 108.9 13.9 133 4-153 54-186 (438)
27 PRK10091 MFS transport protein 99.3 9.6E-11 2.1E-15 106.9 13.6 129 3-153 30-158 (382)
28 TIGR00881 2A0104 phosphoglycer 99.3 1.5E-11 3.2E-16 110.6 8.1 129 3-153 22-151 (379)
29 TIGR00887 2A0109 phosphate:H+ 99.2 2.7E-10 5.9E-15 107.9 16.6 124 7-146 52-176 (502)
30 PRK10077 xylE D-xylose transpo 99.2 2.1E-10 4.6E-15 107.4 15.7 125 5-145 49-180 (479)
31 PRK10642 proline/glycine betai 99.2 3E-10 6.4E-15 107.3 16.6 127 4-148 279-405 (490)
32 PRK15403 multidrug efflux syst 99.2 2.3E-10 5E-15 105.7 15.5 128 4-153 44-171 (413)
33 PRK09705 cynX putative cyanate 99.2 2.5E-10 5.4E-15 104.8 15.2 129 3-153 36-164 (393)
34 PRK09556 uhpT sugar phosphate 99.2 7.2E-11 1.6E-15 110.7 11.7 129 3-147 56-184 (467)
35 PRK14995 methyl viologen resis 99.2 1.6E-10 3.4E-15 109.4 14.0 128 4-153 34-162 (495)
36 TIGR00898 2A0119 cation transp 99.2 4E-10 8.6E-15 106.5 16.5 122 4-146 117-241 (505)
37 PRK11646 multidrug resistance 99.2 5.1E-10 1.1E-14 103.0 16.7 126 4-152 39-164 (400)
38 PRK09556 uhpT sugar phosphate 99.2 3.6E-10 7.8E-15 106.0 16.0 124 4-146 287-411 (467)
39 PRK03893 putative sialic acid 99.2 1.5E-10 3.2E-15 109.0 13.4 129 4-152 304-432 (496)
40 PRK10473 multidrug efflux syst 99.2 2.6E-10 5.6E-15 104.2 14.5 129 3-153 30-158 (392)
41 TIGR00806 rfc RFC reduced fola 99.2 3.7E-10 8.1E-15 104.5 15.1 126 4-153 54-180 (511)
42 PRK03699 putative transporter; 99.2 4.1E-10 8.9E-15 103.2 15.6 129 4-153 35-163 (394)
43 TIGR00879 SP MFS transporter, 99.2 2.3E-10 5E-15 105.9 13.6 117 7-141 67-183 (481)
44 PRK15402 multidrug efflux syst 99.2 6.1E-10 1.3E-14 102.3 16.2 129 3-153 40-168 (406)
45 PRK11652 emrD multidrug resist 99.2 4.2E-10 9.1E-15 102.9 15.0 129 3-153 35-163 (394)
46 cd06174 MFS The Major Facilita 99.2 6.8E-10 1.5E-14 98.5 15.9 129 2-152 25-153 (352)
47 TIGR00886 2A0108 nitrite extru 99.2 4.6E-10 1E-14 101.1 15.0 123 3-146 29-151 (366)
48 TIGR00924 yjdL_sub1_fam amino 99.2 2.7E-10 5.9E-15 107.2 13.1 126 6-153 43-172 (475)
49 TIGR00885 fucP L-fucose:H+ sym 99.2 7.2E-10 1.6E-14 102.5 15.4 126 3-146 30-155 (410)
50 PRK03893 putative sialic acid 99.2 3.7E-10 8E-15 106.3 13.8 128 4-153 48-175 (496)
51 PRK10504 putative transporter; 99.2 5.7E-10 1.2E-14 104.5 14.7 130 2-153 36-165 (471)
52 PLN00028 nitrate transmembrane 99.2 9.2E-10 2E-14 103.7 16.1 122 3-146 63-184 (476)
53 COG2271 UhpC Sugar phosphate p 99.2 2.6E-10 5.6E-15 103.0 11.7 132 3-153 280-414 (448)
54 PRK10489 enterobactin exporter 99.2 3.3E-10 7.1E-15 104.5 12.6 134 3-153 44-177 (417)
55 KOG0569 Permease of the major 99.2 1.1E-09 2.4E-14 102.0 16.0 162 3-208 297-462 (485)
56 PRK11195 lysophospholipid tran 99.2 4.2E-10 9.2E-15 103.3 13.0 120 4-147 31-150 (393)
57 PRK15462 dipeptide/tripeptide 99.2 9.5E-10 2.1E-14 103.5 15.5 129 4-153 38-169 (493)
58 PRK10429 melibiose:sodium symp 99.2 9.5E-09 2.1E-13 96.7 22.3 133 3-153 258-398 (473)
59 KOG1330 Sugar transporter/spin 99.2 6.6E-12 1.4E-16 114.2 0.6 129 4-153 61-189 (493)
60 PRK11273 glpT sn-glycerol-3-ph 99.1 1.8E-09 4E-14 100.8 16.9 132 5-153 283-415 (452)
61 PRK12307 putative sialic acid 99.1 6.7E-10 1.4E-14 102.5 13.6 128 2-148 257-384 (426)
62 PRK11273 glpT sn-glycerol-3-ph 99.1 9.2E-10 2E-14 102.8 14.6 118 7-141 59-176 (452)
63 PRK10207 dipeptide/tripeptide 99.1 8E-10 1.7E-14 104.4 14.3 129 4-153 43-174 (489)
64 PRK11043 putative transporter; 99.1 2.1E-09 4.6E-14 98.5 16.3 129 3-153 33-161 (401)
65 TIGR01299 synapt_SV2 synaptic 99.1 1E-09 2.2E-14 108.0 14.9 114 13-147 597-710 (742)
66 PRK10489 enterobactin exporter 99.1 1.4E-09 3.1E-14 100.2 15.0 125 6-152 254-378 (417)
67 TIGR00879 SP MFS transporter, 99.1 1.2E-09 2.5E-14 101.2 14.3 132 4-153 312-450 (481)
68 TIGR00899 2A0120 sugar efflux 99.1 2.1E-09 4.6E-14 97.0 15.5 129 4-153 26-156 (375)
69 TIGR00890 2A0111 Oxalate/Forma 99.1 1.3E-09 2.8E-14 97.8 13.9 127 4-153 31-157 (377)
70 TIGR00897 2A0118 polyol permea 99.1 1.2E-09 2.7E-14 100.4 13.9 133 2-152 39-172 (402)
71 PRK11551 putative 3-hydroxyphe 99.1 1.4E-09 3E-14 99.7 14.1 125 3-148 247-371 (406)
72 PRK09874 drug efflux system pr 99.1 3.4E-09 7.3E-14 97.0 16.7 128 3-153 41-173 (408)
73 TIGR00880 2_A_01_02 Multidrug 99.1 8.6E-10 1.9E-14 84.7 10.5 114 17-152 4-117 (141)
74 TIGR00889 2A0110 nucleoside tr 99.1 1.4E-09 3E-14 100.8 13.6 122 10-148 250-372 (418)
75 PF05977 MFS_3: Transmembrane 99.1 2.4E-09 5.1E-14 101.7 15.4 128 5-148 39-166 (524)
76 TIGR00890 2A0111 Oxalate/Forma 99.1 2.1E-09 4.6E-14 96.5 14.0 131 3-153 232-362 (377)
77 TIGR00792 gph sugar (Glycoside 99.1 1.5E-08 3.2E-13 93.7 20.0 124 9-153 255-385 (437)
78 KOG0255 Synaptic vesicle trans 99.1 1.8E-09 4E-14 102.6 13.7 120 5-146 112-231 (521)
79 PRK10406 alpha-ketoglutarate t 99.1 4E-09 8.7E-14 97.9 15.6 115 14-145 66-184 (432)
80 PRK10133 L-fucose transporter; 99.1 4.9E-09 1.1E-13 97.8 16.1 125 3-145 53-177 (438)
81 TIGR00892 2A0113 monocarboxyla 99.1 1.5E-09 3.3E-14 101.6 12.7 128 4-153 47-174 (455)
82 KOG0569 Permease of the major 99.1 2.8E-09 6.1E-14 99.4 14.2 108 13-138 62-169 (485)
83 PRK03633 putative MFS family t 99.1 2.8E-09 6.1E-14 97.2 13.9 125 2-147 32-156 (381)
84 PRK15075 citrate-proton sympor 99.1 6.7E-09 1.5E-13 96.5 16.5 130 5-152 268-398 (434)
85 TIGR00897 2A0118 polyol permea 99.1 9.8E-09 2.1E-13 94.4 17.3 130 2-148 248-377 (402)
86 PRK10077 xylE D-xylose transpo 99.1 6.3E-09 1.4E-13 97.5 16.3 124 4-145 299-424 (479)
87 PRK10642 proline/glycine betai 99.1 4.9E-09 1.1E-13 99.0 15.6 111 17-145 63-178 (490)
88 TIGR00901 2A0125 AmpG-related 99.0 7.1E-09 1.5E-13 93.4 15.5 128 2-148 14-146 (356)
89 KOG2615 Permease of the major 99.0 8.2E-10 1.8E-14 98.5 9.0 117 8-146 65-181 (451)
90 PRK03545 putative arabinose tr 99.0 7.3E-09 1.6E-13 94.7 15.5 126 5-153 235-360 (390)
91 PRK15034 nitrate/nitrite trans 99.0 1.6E-08 3.4E-13 94.4 17.8 124 5-145 64-187 (462)
92 PRK09584 tppB putative tripept 99.0 9E-09 2E-13 97.6 16.3 129 4-153 50-181 (500)
93 PRK11902 ampG muropeptide tran 99.0 6.3E-09 1.4E-13 95.6 14.9 133 2-153 25-162 (402)
94 PRK11663 regulatory protein Uh 99.0 7.2E-09 1.6E-13 96.3 15.3 132 4-153 272-404 (434)
95 TIGR00891 2A0112 putative sial 99.0 4.4E-09 9.5E-14 95.7 13.3 124 5-148 268-391 (405)
96 TIGR00893 2A0114 d-galactonate 99.0 7.2E-09 1.6E-13 93.3 14.6 129 4-148 244-374 (399)
97 PRK10504 putative transporter; 99.0 1.8E-08 3.8E-13 94.4 17.6 129 5-152 291-419 (471)
98 PRK11462 putative transporter; 99.0 4.6E-08 1E-12 91.8 19.9 124 10-153 262-392 (460)
99 PRK08633 2-acyl-glycerophospho 99.0 4E-09 8.8E-14 109.0 13.9 119 11-147 47-165 (1146)
100 PRK09669 putative symporter Ya 99.0 5.8E-08 1.3E-12 90.5 20.2 124 10-153 263-393 (444)
101 PRK09952 shikimate transporter 99.0 1.3E-08 2.9E-13 94.7 15.7 110 19-146 72-186 (438)
102 PRK09952 shikimate transporter 99.0 2.5E-08 5.5E-13 92.8 17.0 127 5-148 280-407 (438)
103 PRK05122 major facilitator sup 99.0 1.3E-08 2.8E-13 93.2 14.8 119 12-152 250-368 (399)
104 PRK06814 acylglycerophosphoeth 99.0 9.1E-09 2E-13 106.5 14.7 124 11-153 52-175 (1140)
105 PRK15011 sugar efflux transpor 99.0 4.2E-08 9.2E-13 89.9 17.4 126 4-152 245-370 (393)
106 TIGR00896 CynX cyanate transpo 99.0 3.8E-08 8.3E-13 88.7 16.9 123 3-148 27-149 (355)
107 TIGR00883 2A0106 metabolite-pr 99.0 1.1E-08 2.4E-13 92.4 13.3 128 4-148 248-376 (394)
108 TIGR00712 glpT glycerol-3-phos 99.0 8.8E-09 1.9E-13 95.8 12.9 132 5-153 281-413 (438)
109 PRK09528 lacY galactoside perm 99.0 1.6E-08 3.5E-13 93.4 14.5 125 7-153 258-383 (420)
110 PLN00028 nitrate transmembrane 99.0 9.4E-09 2E-13 96.8 12.9 122 4-140 281-402 (476)
111 PRK09848 glucuronide transport 98.9 1.1E-07 2.3E-12 88.7 19.8 129 5-153 258-393 (448)
112 PRK09705 cynX putative cyanate 98.9 1.1E-08 2.4E-13 93.9 12.7 124 3-148 232-356 (393)
113 PRK03699 putative transporter; 98.9 3.9E-08 8.6E-13 90.1 15.9 127 4-153 234-360 (394)
114 TIGR00887 2A0109 phosphate:H+ 98.9 7E-09 1.5E-13 98.2 11.1 111 19-147 343-454 (502)
115 cd06174 MFS The Major Facilita 98.9 3E-08 6.6E-13 87.9 14.5 126 6-153 206-332 (352)
116 TIGR00805 oat sodium-independe 98.9 2.7E-09 6E-14 103.8 8.3 136 4-153 61-240 (633)
117 PRK12382 putative transporter; 98.9 3.2E-08 7E-13 90.4 14.6 126 4-153 244-369 (392)
118 PRK15075 citrate-proton sympor 98.9 2.4E-08 5.2E-13 92.8 14.0 124 4-145 43-177 (434)
119 COG2223 NarK Nitrate/nitrite t 98.9 3.9E-08 8.5E-13 89.0 14.5 124 4-148 42-166 (417)
120 KOG0254 Predicted transporter 98.9 2.5E-08 5.5E-13 94.8 14.2 113 11-145 89-201 (513)
121 TIGR00881 2A0104 phosphoglycer 98.9 2E-08 4.3E-13 90.2 12.7 133 4-153 245-377 (379)
122 PRK03633 putative MFS family t 98.9 5.7E-08 1.2E-12 88.6 15.7 127 2-153 226-352 (381)
123 PF11700 ATG22: Vacuole efflux 98.9 9.7E-08 2.1E-12 89.8 17.5 132 5-148 311-443 (477)
124 PRK11128 putative 3-phenylprop 98.9 1.7E-08 3.6E-13 92.2 12.0 130 2-153 30-159 (382)
125 PRK11010 ampG muropeptide tran 98.9 7.5E-08 1.6E-12 91.1 16.6 131 4-152 251-382 (491)
126 TIGR00899 2A0120 sugar efflux 98.9 6.3E-08 1.4E-12 87.4 15.4 127 4-153 228-354 (375)
127 PRK14995 methyl viologen resis 98.9 1.7E-07 3.7E-12 88.7 18.8 126 5-148 289-414 (495)
128 PTZ00207 hypothetical protein; 98.9 8.6E-08 1.9E-12 92.0 16.6 123 4-144 55-178 (591)
129 TIGR02718 sider_RhtX_FptX side 98.9 1.2E-07 2.6E-12 86.7 17.0 135 2-152 234-370 (390)
130 TIGR00900 2A0121 H+ Antiporter 98.9 2.6E-08 5.6E-13 89.1 12.3 124 5-148 241-364 (365)
131 PF05977 MFS_3: Transmembrane 98.9 4.1E-08 8.8E-13 93.4 14.1 124 4-148 247-370 (524)
132 PRK10406 alpha-ketoglutarate t 98.9 9.3E-08 2E-12 88.8 16.3 127 4-148 272-399 (432)
133 KOG0252 Inorganic phosphate tr 98.9 2.2E-08 4.8E-13 91.4 11.5 120 8-143 81-202 (538)
134 TIGR00895 2A0115 benzoate tran 98.9 1.8E-08 3.9E-13 91.2 11.2 121 3-144 277-397 (398)
135 COG2211 MelB Na+/melibiose sym 98.8 8.7E-07 1.9E-11 82.3 21.0 170 5-206 266-442 (467)
136 KOG4686 Predicted sugar transp 98.8 1.9E-08 4.1E-13 86.8 8.9 129 2-152 291-419 (459)
137 TIGR00711 efflux_EmrB drug res 98.8 5.5E-08 1.2E-12 91.1 12.9 127 5-148 285-411 (485)
138 PRK09874 drug efflux system pr 98.8 1.4E-07 3.1E-12 86.2 15.2 119 13-153 260-378 (408)
139 TIGR00883 2A0106 metabolite-pr 98.8 1.2E-07 2.5E-12 85.7 14.4 120 9-146 28-157 (394)
140 PF06609 TRI12: Fungal trichot 98.8 8.2E-08 1.8E-12 91.9 13.5 124 6-153 74-197 (599)
141 COG2814 AraJ Arabinose efflux 98.8 2.2E-07 4.7E-12 84.6 15.5 128 3-153 239-366 (394)
142 TIGR01301 GPH_sucrose GPH fami 98.8 6.7E-08 1.5E-12 90.7 12.4 127 2-144 30-175 (477)
143 KOG3764 Vesicular amine transp 98.8 3.2E-08 6.8E-13 89.0 9.7 126 6-153 101-227 (464)
144 TIGR00902 2A0127 phenyl propri 98.8 9.4E-08 2E-12 87.3 13.2 130 2-153 30-159 (382)
145 TIGR00792 gph sugar (Glycoside 98.8 7.8E-08 1.7E-12 88.9 12.8 134 2-147 26-162 (437)
146 PRK09528 lacY galactoside perm 98.8 6.6E-08 1.4E-12 89.3 12.2 125 5-146 40-166 (420)
147 PRK11010 ampG muropeptide tran 98.8 1.6E-07 3.4E-12 89.0 14.9 133 2-153 38-175 (491)
148 TIGR00882 2A0105 oligosacchari 98.8 9E-08 1.9E-12 87.7 12.9 131 4-152 31-162 (396)
149 PRK15402 multidrug efflux syst 98.8 1.5E-07 3.2E-12 86.5 14.1 128 4-148 244-371 (406)
150 TIGR00898 2A0119 cation transp 98.8 1.7E-07 3.8E-12 88.5 14.8 107 17-142 361-467 (505)
151 PRK15011 sugar efflux transpor 98.8 3.2E-07 6.9E-12 84.1 16.1 128 4-153 44-174 (393)
152 TIGR02332 HpaX 4-hydroxyphenyl 98.8 6.7E-08 1.4E-12 89.3 11.1 127 7-153 275-401 (412)
153 PRK10091 MFS transport protein 98.7 4.5E-07 9.7E-12 82.8 14.8 128 5-153 229-356 (382)
154 PF00083 Sugar_tr: Sugar (and 98.7 1.3E-10 2.9E-15 108.0 -8.6 115 10-142 45-159 (451)
155 TIGR01272 gluP glucose/galacto 98.7 4.9E-07 1.1E-11 80.5 14.5 119 6-148 173-291 (310)
156 TIGR00710 efflux_Bcr_CflA drug 98.7 6.6E-07 1.4E-11 81.0 15.5 124 4-144 235-358 (385)
157 TIGR00896 CynX cyanate transpo 98.7 2.9E-07 6.3E-12 82.9 12.9 129 2-151 223-352 (355)
158 COG0738 FucP Fucose permease [ 98.7 1.4E-06 3E-11 78.8 16.1 126 3-147 40-166 (422)
159 TIGR00902 2A0127 phenyl propri 98.7 1.2E-06 2.6E-11 80.0 16.2 125 2-148 231-356 (382)
160 PRK10213 nepI ribonucleoside t 98.6 1.1E-06 2.4E-11 80.7 15.7 128 2-152 243-370 (394)
161 PRK10473 multidrug efflux syst 98.6 7.5E-07 1.6E-11 81.4 14.2 122 4-152 232-353 (392)
162 KOG2533 Permease of the major 98.6 3E-07 6.5E-12 86.6 11.7 129 4-153 74-207 (495)
163 PF13347 MFS_2: MFS/sugar tran 98.6 1E-06 2.2E-11 81.7 15.1 128 6-154 256-390 (428)
164 COG2223 NarK Nitrate/nitrite t 98.6 3.6E-07 7.8E-12 82.8 11.4 129 3-148 246-376 (417)
165 COG2270 Permeases of the major 98.6 3.1E-07 6.7E-12 83.4 10.3 123 5-148 282-404 (438)
166 PRK10133 L-fucose transporter; 98.6 1.6E-06 3.4E-11 80.9 15.2 121 4-148 288-408 (438)
167 PRK08633 2-acyl-glycerophospho 98.6 8.2E-07 1.8E-11 92.0 14.5 122 4-146 261-383 (1146)
168 PRK11195 lysophospholipid tran 98.6 2.4E-06 5.2E-11 78.4 16.0 119 5-145 235-354 (393)
169 PRK11043 putative transporter; 98.6 2.1E-06 4.5E-11 78.7 15.2 127 2-146 229-356 (401)
170 PRK06814 acylglycerophosphoeth 98.6 8.3E-07 1.8E-11 92.1 13.9 126 5-146 255-395 (1140)
171 PRK11646 multidrug resistance 98.6 3.6E-06 7.9E-11 77.4 16.3 126 2-148 234-360 (400)
172 PRK11128 putative 3-phenylprop 98.6 3.4E-06 7.3E-11 77.0 16.0 125 2-148 231-356 (382)
173 TIGR00894 2A0114euk Na(+)-depe 98.5 8.4E-07 1.8E-11 83.1 12.0 132 4-147 290-422 (465)
174 PRK11902 ampG muropeptide tran 98.5 5.2E-06 1.1E-10 76.3 16.8 127 4-152 238-369 (402)
175 PRK09669 putative symporter Ya 98.5 9.7E-07 2.1E-11 82.3 12.0 134 2-147 36-172 (444)
176 PRK15034 nitrate/nitrite trans 98.5 2.2E-06 4.8E-11 80.1 14.2 116 17-148 292-429 (462)
177 PF07690 MFS_1: Major Facilita 98.5 5.1E-07 1.1E-11 80.4 9.7 118 3-138 234-352 (352)
178 PRK10054 putative transporter; 98.5 1.5E-06 3.1E-11 80.0 12.9 125 6-152 239-363 (395)
179 TIGR00903 2A0129 major facilit 98.5 2.2E-06 4.7E-11 78.2 13.8 122 3-145 219-340 (368)
180 KOG2504 Monocarboxylate transp 98.5 3.6E-07 7.8E-12 86.6 8.3 133 2-153 324-456 (509)
181 TIGR00901 2A0125 AmpG-related 98.5 1.1E-06 2.4E-11 79.2 11.0 114 2-131 235-355 (356)
182 TIGR02718 sider_RhtX_FptX side 98.5 3.7E-06 8E-11 76.8 14.6 135 2-153 27-164 (390)
183 TIGR00882 2A0105 oligosacchari 98.5 4.3E-06 9.3E-11 76.6 14.8 124 7-152 250-374 (396)
184 TIGR00788 fbt folate/biopterin 98.5 1.3E-06 2.9E-11 82.2 11.6 129 4-150 281-415 (468)
185 COG3104 PTR2 Dipeptide/tripept 98.5 8.4E-07 1.8E-11 82.2 9.2 126 6-152 56-185 (498)
186 KOG0253 Synaptic vesicle trans 98.4 7.9E-07 1.7E-11 79.5 8.4 102 19-141 389-490 (528)
187 PRK09848 glucuronide transport 98.4 5.2E-06 1.1E-10 77.5 14.4 118 4-133 37-158 (448)
188 PRK10429 melibiose:sodium symp 98.4 6E-06 1.3E-10 77.7 14.9 129 2-146 33-168 (473)
189 KOG0254 Predicted transporter 98.4 6.1E-06 1.3E-10 78.5 15.0 127 4-146 323-456 (513)
190 PRK11462 putative transporter; 98.4 5.6E-06 1.2E-10 77.7 14.4 135 2-148 36-173 (460)
191 KOG2504 Monocarboxylate transp 98.4 2.3E-06 5E-11 81.2 11.0 129 3-153 73-201 (509)
192 PRK11652 emrD multidrug resist 98.4 1E-05 2.2E-10 73.9 15.0 123 5-146 237-359 (394)
193 PF03825 Nuc_H_symport: Nucleo 98.4 1.8E-05 4E-10 73.0 16.3 132 2-152 233-368 (400)
194 PRK11102 bicyclomycin/multidru 98.3 1.4E-05 3E-10 72.4 14.4 39 3-41 222-260 (377)
195 KOG2325 Predicted transporter/ 98.3 1.6E-06 3.4E-11 80.8 8.2 126 2-146 60-190 (488)
196 PF03209 PUCC: PUCC protein; 98.3 1.2E-05 2.5E-10 73.2 13.1 131 4-148 8-152 (403)
197 KOG0253 Synaptic vesicle trans 98.3 6E-06 1.3E-10 74.0 10.6 125 5-153 107-231 (528)
198 TIGR00788 fbt folate/biopterin 98.3 1.5E-05 3.3E-10 75.0 13.7 133 4-153 54-189 (468)
199 PF06813 Nodulin-like: Nodulin 98.3 2E-05 4.2E-10 67.9 12.9 123 4-144 30-154 (250)
200 PF13347 MFS_2: MFS/sugar tran 98.2 1.3E-06 2.8E-11 81.0 5.1 132 2-148 28-167 (428)
201 PF03825 Nuc_H_symport: Nucleo 98.2 2.1E-05 4.5E-10 72.6 12.0 118 2-141 28-145 (400)
202 COG2807 CynX Cyanate permease 98.2 2.9E-05 6.3E-10 69.5 12.4 130 3-153 235-365 (395)
203 COG2211 MelB Na+/melibiose sym 98.2 5.6E-05 1.2E-09 70.4 14.0 135 2-148 39-176 (467)
204 TIGR00889 2A0110 nucleoside tr 98.1 6.1E-05 1.3E-09 69.8 14.0 38 4-41 31-68 (418)
205 COG2807 CynX Cyanate permease 98.1 0.0001 2.3E-09 66.0 14.4 127 4-153 40-166 (395)
206 TIGR00885 fucP L-fucose:H+ sym 98.1 9E-05 1.9E-09 68.6 14.8 118 7-148 265-382 (410)
207 PF05631 DUF791: Protein of un 98.1 0.00012 2.6E-09 65.6 14.5 80 4-96 62-141 (354)
208 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.00015 3.3E-09 70.9 16.1 129 4-148 16-151 (654)
209 TIGR00886 2A0108 nitrite extru 98.1 1.8E-05 3.8E-10 71.2 8.7 112 4-133 254-365 (366)
210 COG0738 FucP Fucose permease [ 98.0 6.5E-05 1.4E-09 68.1 11.8 119 6-148 267-385 (422)
211 PF03209 PUCC: PUCC protein; 98.0 0.00071 1.5E-08 61.7 17.9 127 4-148 237-364 (403)
212 PF00083 Sugar_tr: Sugar (and 98.0 3.6E-08 7.9E-13 91.7 -10.5 125 5-148 282-412 (451)
213 PRK15403 multidrug efflux syst 98.0 0.00039 8.5E-09 64.3 16.0 126 4-147 247-373 (413)
214 PF01306 LacY_symp: LacY proto 97.9 5.7E-06 1.2E-10 76.0 3.1 127 2-147 33-164 (412)
215 PRK10207 dipeptide/tripeptide 97.9 0.00097 2.1E-08 63.2 17.0 122 14-144 312-438 (489)
216 KOG0252 Inorganic phosphate tr 97.8 1.2E-05 2.6E-10 73.9 3.5 103 27-147 364-468 (538)
217 KOG2816 Predicted transporter 97.8 0.00015 3.3E-09 68.0 10.5 106 19-148 70-175 (463)
218 TIGR00924 yjdL_sub1_fam amino 97.8 0.0014 3.1E-08 61.8 16.9 125 13-146 314-442 (475)
219 KOG3762 Predicted transporter 97.8 9.9E-05 2.1E-09 69.2 8.6 125 3-148 398-523 (618)
220 PF01306 LacY_symp: LacY proto 97.8 0.0005 1.1E-08 63.4 12.6 122 6-148 254-376 (412)
221 KOG2532 Permease of the major 97.7 0.00026 5.5E-09 66.6 9.3 131 4-146 287-418 (466)
222 PF06609 TRI12: Fungal trichot 97.6 0.0031 6.7E-08 60.9 16.3 117 12-146 350-466 (599)
223 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00024 5.2E-09 49.7 6.0 40 2-41 26-65 (77)
224 PF03092 BT1: BT1 family; Int 97.6 0.0015 3.3E-08 60.9 13.2 138 2-153 16-155 (433)
225 PF11700 ATG22: Vacuole efflux 97.5 0.0058 1.3E-07 57.8 16.8 114 13-144 72-211 (477)
226 KOG2533 Permease of the major 97.5 0.0009 1.9E-08 63.3 11.2 33 6-38 304-336 (495)
227 PRK09584 tppB putative tripept 97.5 0.007 1.5E-07 57.5 17.0 120 13-146 318-439 (500)
228 PRK03612 spermidine synthase; 97.5 0.0059 1.3E-07 58.3 15.8 128 5-148 44-172 (521)
229 COG0477 ProP Permeases of the 97.4 0.0041 8.8E-08 52.8 12.3 118 11-147 39-158 (338)
230 KOG0255 Synaptic vesicle trans 97.1 0.019 4E-07 54.7 14.6 112 17-146 356-467 (521)
231 KOG2615 Permease of the major 97.0 0.0022 4.8E-08 58.0 7.0 126 4-148 290-415 (451)
232 KOG2563 Permease of the major 97.0 0.011 2.3E-07 54.8 11.4 123 6-147 75-202 (480)
233 TIGR01301 GPH_sucrose GPH fami 97.0 0.048 1E-06 51.6 16.0 119 15-148 309-445 (477)
234 PF06963 FPN1: Ferroportin1 (F 96.9 0.023 4.9E-07 53.0 12.8 120 2-137 284-408 (432)
235 KOG2563 Permease of the major 96.9 0.0098 2.1E-07 55.0 10.1 128 5-148 295-422 (480)
236 PF05978 UNC-93: Ion channel r 96.8 0.041 9E-07 43.9 12.2 106 17-144 43-148 (156)
237 TIGR01272 gluP glucose/galacto 96.7 0.0078 1.7E-07 53.5 8.4 64 75-147 9-72 (310)
238 KOG3764 Vesicular amine transp 96.6 0.0035 7.5E-08 57.1 5.3 132 5-153 300-434 (464)
239 PRK15462 dipeptide/tripeptide 96.6 0.26 5.7E-06 46.8 18.1 124 13-148 310-437 (493)
240 COG2270 Permeases of the major 96.6 0.035 7.6E-07 51.0 11.5 113 11-140 58-170 (438)
241 PF03092 BT1: BT1 family; Int 96.5 0.015 3.2E-07 54.4 9.2 41 108-148 341-381 (433)
242 TIGR00805 oat sodium-independe 96.5 0.068 1.5E-06 52.4 14.1 41 108-148 541-582 (633)
243 PTZ00207 hypothetical protein; 96.5 0.13 2.9E-06 49.9 15.4 116 16-147 396-514 (591)
244 PF03137 OATP: Organic Anion T 96.3 0.00061 1.3E-08 65.3 -1.4 129 4-148 31-204 (539)
245 KOG2816 Predicted transporter 96.0 0.17 3.7E-06 47.6 13.2 122 5-148 271-393 (463)
246 TIGR00769 AAA ADP/ATP carrier 96.0 0.83 1.8E-05 43.2 17.7 125 9-147 41-191 (472)
247 KOG3098 Uncharacterized conser 95.8 0.69 1.5E-05 43.5 16.3 55 78-142 355-409 (461)
248 KOG4686 Predicted sugar transp 95.8 0.0039 8.4E-08 54.5 1.3 125 6-148 74-199 (459)
249 TIGR00939 2a57 Equilibrative N 95.7 0.65 1.4E-05 43.5 15.8 79 16-95 46-125 (437)
250 KOG3762 Predicted transporter 95.4 0.025 5.4E-07 53.5 5.2 40 2-41 37-76 (618)
251 PF06779 DUF1228: Protein of u 95.3 0.11 2.4E-06 36.9 7.0 39 3-41 19-57 (85)
252 PF01770 Folate_carrier: Reduc 95.3 0.88 1.9E-05 42.1 14.8 119 6-146 35-154 (412)
253 PF06963 FPN1: Ferroportin1 (F 95.1 1.5 3.2E-05 41.0 15.9 34 115-148 143-176 (432)
254 KOG4332 Predicted sugar transp 94.5 0.078 1.7E-06 46.2 5.3 81 4-97 65-145 (454)
255 KOG3626 Organic anion transpor 94.3 0.18 4E-06 49.7 8.1 131 5-151 126-303 (735)
256 PF00854 PTR2: POT family; In 94.1 0.22 4.8E-06 45.3 7.9 62 78-148 35-99 (372)
257 COG3104 PTR2 Dipeptide/tripept 93.9 2.3 5E-05 40.2 14.0 121 13-142 326-451 (498)
258 PF03137 OATP: Organic Anion T 93.6 0.019 4.2E-07 55.1 0.0 133 5-148 335-515 (539)
259 KOG0637 Sucrose transporter an 91.9 0.053 1.1E-06 50.4 0.3 130 2-142 58-200 (498)
260 KOG3626 Organic anion transpor 91.2 0.97 2.1E-05 44.8 8.1 42 107-148 608-650 (735)
261 PF03547 Mem_trans: Membrane t 91.0 3 6.6E-05 38.0 11.0 17 22-38 6-22 (385)
262 KOG3098 Uncharacterized conser 90.3 3.1 6.7E-05 39.2 10.3 105 17-143 56-160 (461)
263 TIGR00806 rfc RFC reduced fola 88.7 2.2 4.7E-05 40.5 8.0 105 12-135 299-403 (511)
264 COG3202 ATP/ADP translocase [E 88.2 24 0.00052 33.5 16.0 127 8-148 58-211 (509)
265 PF02487 CLN3: CLN3 protein; 84.9 16 0.00035 33.8 11.4 71 13-95 61-131 (402)
266 TIGR00939 2a57 Equilibrative N 83.9 9.5 0.00021 35.7 9.7 54 78-140 374-427 (437)
267 KOG4332 Predicted sugar transp 82.1 8.6 0.00019 33.9 7.9 105 13-131 284-390 (454)
268 COG5336 Uncharacterized protei 81.7 12 0.00025 27.7 7.3 38 116-153 37-74 (116)
269 PF11947 DUF3464: Protein of u 78.7 12 0.00027 29.6 7.2 28 107-134 116-143 (153)
270 PF02487 CLN3: CLN3 protein; 77.8 18 0.0004 33.5 9.1 57 76-141 335-391 (402)
271 PF01733 Nucleoside_tran: Nucl 76.0 0.87 1.9E-05 40.4 0.0 111 16-140 187-303 (309)
272 KOG1237 H+/oligopeptide sympor 75.7 36 0.00079 33.1 11.0 135 5-153 67-225 (571)
273 PF13000 Acatn: Acetyl-coenzym 75.1 37 0.00079 32.5 10.3 45 107-152 427-471 (544)
274 PF07857 DUF1632: CEO family ( 71.5 63 0.0014 27.9 10.3 30 119-153 77-106 (254)
275 COG5336 Uncharacterized protei 70.6 28 0.00061 25.8 6.7 26 15-40 46-71 (116)
276 PF01770 Folate_carrier: Reduc 69.4 40 0.00086 31.4 9.2 104 12-134 286-389 (412)
277 KOG1479 Nucleoside transporter 66.9 1.1E+02 0.0024 28.4 13.9 18 78-95 119-136 (406)
278 PF13000 Acatn: Acetyl-coenzym 66.1 37 0.00081 32.5 8.3 48 85-141 127-174 (544)
279 KOG1479 Nucleoside transporter 65.2 60 0.0013 30.1 9.4 114 10-138 281-396 (406)
280 PF07672 MFS_Mycoplasma: Mycop 62.2 1.1E+02 0.0023 26.7 10.4 28 115-142 236-263 (267)
281 PF00558 Vpu: Vpu protein; In 61.6 22 0.00048 24.9 4.5 25 184-208 14-38 (81)
282 KOG2325 Predicted transporter/ 60.1 4.1 9E-05 38.6 1.0 46 107-153 410-455 (488)
283 PRK10263 DNA translocase FtsK; 57.5 2.8E+02 0.0061 30.0 15.0 16 132-147 142-157 (1355)
284 PF03219 TLC: TLC ATP/ADP tran 56.9 1.8E+02 0.004 27.7 17.3 40 107-146 166-205 (491)
285 TIGR01667 YCCS_YHJK integral m 49.2 2.9E+02 0.0063 27.7 12.6 14 78-91 83-96 (701)
286 KOG3574 Acetyl-CoA transporter 48.0 56 0.0012 30.4 6.1 45 108-153 392-436 (510)
287 KOG2568 Predicted membrane pro 46.1 2.8E+02 0.0061 26.7 10.7 15 5-19 261-275 (518)
288 PF12805 FUSC-like: FUSC-like 46.1 2E+02 0.0044 25.0 10.1 8 82-89 29-36 (284)
289 TIGR00880 2_A_01_02 Multidrug 46.0 1.1E+02 0.0023 22.0 6.8 10 31-40 73-82 (141)
290 KOG3810 Micronutrient transpor 45.0 59 0.0013 29.8 5.7 101 14-133 274-374 (433)
291 PF04281 Tom22: Mitochondrial 44.6 71 0.0015 24.8 5.4 23 110-132 60-82 (137)
292 TIGR01666 YCCS hypothetical me 43.6 3.6E+02 0.0077 27.2 12.7 12 29-40 41-52 (704)
293 KOG3574 Acetyl-CoA transporter 43.2 80 0.0017 29.5 6.3 14 28-41 80-98 (510)
294 KOG2601 Iron transporter [Inor 43.1 2.8E+02 0.0062 25.9 12.1 29 120-148 174-202 (503)
295 PF13940 Ldr_toxin: Toxin Ldr, 38.9 53 0.0011 18.8 2.8 20 18-37 15-34 (35)
296 TIGR00986 3a0801s05tom22 mitoc 37.6 67 0.0014 25.1 4.3 22 110-131 58-79 (145)
297 PF02694 UPF0060: Uncharacteri 36.9 64 0.0014 23.9 3.9 33 9-41 52-84 (107)
298 PRK02237 hypothetical protein; 36.5 1E+02 0.0022 22.9 4.8 31 11-41 56-86 (109)
299 PF04024 PspC: PspC domain; I 33.0 1.3E+02 0.0029 19.7 4.6 15 189-203 45-59 (61)
300 TIGR00926 2A1704 Peptide:H+ sy 30.2 4.2E+02 0.0092 26.3 9.6 55 78-141 567-621 (654)
301 PF11712 Vma12: Endoplasmic re 29.5 2.7E+02 0.0058 21.5 7.0 24 14-37 78-102 (142)
302 COG1268 BioY Uncharacterized c 27.9 2.1E+02 0.0046 23.4 6.0 21 20-40 91-111 (184)
303 PF12670 DUF3792: Protein of u 23.3 3.2E+02 0.0069 20.3 9.1 32 7-41 33-64 (116)
304 KOG4830 Predicted sugar transp 23.2 47 0.001 29.3 1.4 40 2-41 43-91 (412)
305 PF01528 Herpes_glycop: Herpes 22.6 6.1E+02 0.013 23.3 8.8 7 107-113 256-262 (374)
306 KOG3097 Predicted membrane pro 22.1 4.1E+02 0.0089 24.3 7.0 34 8-41 307-340 (390)
307 COG3619 Predicted membrane pro 21.7 5E+02 0.011 22.0 17.5 30 11-40 55-84 (226)
308 COG5346 Predicted membrane pro 21.4 3.4E+02 0.0074 20.7 5.4 11 31-41 82-92 (136)
309 PF02990 EMP70: Endomembrane p 20.9 3.7E+02 0.008 25.9 7.1 33 9-41 291-323 (521)
310 PF03818 MadM: Malonate/sodium 20.0 2.7E+02 0.0059 18.3 5.3 14 28-41 24-37 (60)
No 1
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.42 E-value=4.3e-12 Score=115.61 Aligned_cols=128 Identities=16% Similarity=-0.037 Sum_probs=97.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|+.+.+++.+.+.+++.+++++.|+++||+||| +++... ...... ..... . ... ..+.+++.
T Consensus 18 ~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~--~~~~~~-~~~~~-~--~~~-~~~~l~~~ 85 (368)
T TIGR00903 18 AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGS--LATFAA-AAGRL-L--DPF-NYEWLLAC 85 (368)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHH--HHHHHH-HHHHH-H--Hhc-cHHHHHHH
Confidence 457899999999999999999999999999999999988 663322 222111 11111 1 111 23478888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+. ...++|.+|+++|+++.++......+|..+++.+.+++.++. |||.
T Consensus 86 R~l~G~g~~~~~~~----------~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~ 145 (368)
T TIGR00903 86 QLLAALGQPFLLNA----------FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQL 145 (368)
T ss_pred HHHHHhHhHHHHHH----------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHH
Confidence 99999998854432 356689999999999999999999999999999999998764 7875
No 2
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.40 E-value=5.3e-13 Score=121.28 Aligned_cols=176 Identities=42% Similarity=0.698 Sum_probs=124.2
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|.++.+..++..+...++.+|.+++|.++||+.|+++|..+...-++...+++++...+....+..........+.++
T Consensus 277 ~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~ 356 (493)
T KOG1330|consen 277 LIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILF 356 (493)
T ss_pred HhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 34667777888888999999999999999999999999998777666666666665555444444444333336677778
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhH-HHHHHHHHHHhhCCCCCCccccCcch
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIA-PPVVGLLAHHVYGYKPVPKEASNSAE 163 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~-~~~~g~l~~~~~g~~~~~~~~~~~~~ 163 (279)
++|....+...+.| -.+..+++|++.|.+++++...+..+.+..+ |.+.|.+.++..||++ .+++-+..
T Consensus 357 ~~g~~~~~~~~a~n--------~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~~--~~~~~~~~ 426 (493)
T KOG1330|consen 357 LVGETISWFNWATN--------NPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYKP--AGGIDSVL 426 (493)
T ss_pred HHHHHHHhcccccc--------cceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCCc--cccccccc
Confidence 88888776666666 5788999999999999999999888877654 5599999999999986 11122222
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 037387 164 VETDRENAASLAKALYTAIGIPMAICC 190 (279)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (279)
....+.++..+..+.+.....++.+++
T Consensus 427 ~~s~~~~a~~l~~a~~~~~~~~f~v~~ 453 (493)
T KOG1330|consen 427 QTSLRLCAALLAKALIWSIGSPFGVCC 453 (493)
T ss_pred cchhhhhHHHHHHHHHHhhccceeeee
Confidence 233444444444444444444444333
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=9.6e-12 Score=112.65 Aligned_cols=128 Identities=20% Similarity=0.241 Sum_probs=104.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|.|..++|++.+.+.++..+++++...+.||+.|| ++++.....++..-+...+ .+.++++++.+
T Consensus 41 ~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----~lLl~~l~lFi~~n~l~al-------Ap~f~~Ll~aR 108 (394)
T COG2814 41 ADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR-----RLLLGLLALFIVSNLLSAL-------APSFAVLLLAR 108 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH-----HHHHHHHHHHHHHHHHHHH-------hccHHHHHHHH
Confidence 57899999999999999999999999999999999999 8754443333221111111 13345889999
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|+..|...... .++..+++|+++|+++.++......+...+|.+++.++.+.+ |||.
T Consensus 109 ~~~g~a~G~f~~i~---------~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~ 168 (394)
T COG2814 109 ALAGLAHGVFWSIA---------AALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRA 168 (394)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHH
Confidence 99999999555544 588999999999999999999999999999999999999976 8876
No 4
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=1.7e-11 Score=109.80 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=100.9
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|..+.+.+..+.+++.++..++..+++++.|+++||+||| +.+...........+ .......... ...+.+.+
T Consensus 25 ~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 97 (365)
T TIGR00900 25 YVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLVA-VLPFVALLGG-LNIWQVYV 97 (365)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHHH-HHHHHHHcCC-CcHHHHHH
Confidence 3456788999999999999999999999999999999999 764433222111111 1111111111 13346777
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++.|++.+...++. .+++.|.+|+++|++++++.+....+|..++|.+.+.+.+.. ||+.
T Consensus 98 ~~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~ 159 (365)
T TIGR00900 98 LAGILAIAQAFFTPAY---------QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKW 159 (365)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHH
Confidence 8888899888766666 489999999999999999999999999999999999998865 5553
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=1.6e-11 Score=120.59 Aligned_cols=127 Identities=15% Similarity=0.097 Sum_probs=98.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.+++.++.++|++++|+++||+||| +.++... ++......+.. . .+ ..+.+++++
T Consensus 195 ~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR-----~~lii~l--il~~i~~ll~a--f--a~-s~~~llv~R 262 (742)
T TIGR01299 195 KDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK-----QCLLICL--SVNGFFAFFSS--F--VQ-GYGFFLFCR 262 (742)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH--HHHHHHHHHHH--H--Hh-hHHHHHHHH
Confidence 45789999999999999999999999999999999999 7643332 22111111111 1 11 234777889
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
++.|++.+...+.. .+++.|.+|++.|++++++...+..+|..+++.++..+.... ||+
T Consensus 263 ~l~G~g~g~~~p~~---------~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~-G~~ 321 (742)
T TIGR01299 263 LLSGFGIGGAIPIV---------FSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY-GWS 321 (742)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cch
Confidence 99999998666665 599999999999999999999999999999998888777643 654
No 6
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=9.5e-12 Score=112.06 Aligned_cols=129 Identities=18% Similarity=0.208 Sum_probs=100.1
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.++..++..+++++.|+++||+||| +.+... ..+......+.. ... ..+.+.+.
T Consensus 21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~--~~~~~~~~~~~~--~~~---~~~~~~~~ 88 (399)
T TIGR00893 21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----KTLAVF--IVIWGVFTGLQA--FAG---AYVSLYIL 88 (399)
T ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----eeeHHH--HHHHHHHHHHHH--HHc---CHHHHHHH
Confidence 356899999999999999999999999999999999999 663332 222111111111 111 23367788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...++. ..++.|.+|++.|+++.++......+|..++|.+.+.+.+.. +|+.
T Consensus 89 ~~l~g~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 149 (399)
T TIGR00893 89 RVLLGAAEAPFFPGI---------ILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQW 149 (399)
T ss_pred HHHHHHHHHhhhhHH---------HHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchH
Confidence 889999988666655 489999999999999999999999999999999999988865 6664
No 7
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=2.5e-11 Score=110.48 Aligned_cols=125 Identities=17% Similarity=0.095 Sum_probs=96.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.++..++..+++++.|+++||+||| +.+.... .+......... . .. ..+.+++.
T Consensus 39 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~--~~~~~~~~~~~--~--~~-~~~~l~~~ 106 (405)
T TIGR00891 39 AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR-----LPMVTSI--VLFSAGTLACG--F--AP-GYITMFIA 106 (405)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHH--HHHHHHHHHHH--H--hc-cHHHHHHH
Confidence 357899999999999999999999999999999999999 7643322 22111111111 1 11 23366778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+++.|++.+...+.. .+++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..
T Consensus 107 ~~l~G~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 107 RLVIGIGMGGEYGSS---------AAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHhhhhhhhHHH---------HHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999888665555 488999999999999999999999999999999999888754
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=2.9e-11 Score=110.55 Aligned_cols=129 Identities=8% Similarity=0.061 Sum_probs=98.8
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|..+.+++.+.+.++..+++++.|+++||+||| +++.... .+......... ..+ ..+.+.+.
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~--~~~~~~~~~~~----~~~-~~~~l~~~ 103 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR-----KLLIGLF--VLFIASHVLSA----LAW-NFTVLLIS 103 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH-----HHHHHHH--HHHHHHHHHHH----Hhc-cHHHHHHH
Confidence 467899999999999999999999999999999999999 7744332 22111111111 112 23467777
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.+.+|+++|+++.|+......++..++|++.+.+.++. ||++
T Consensus 104 r~~~G~~~~~~~~~~---------~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~ 164 (390)
T PRK03545 104 RIGIAFAHAIFWSIT---------ASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRT 164 (390)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHH
Confidence 888888877554544 388899999999999999999999999999999999988865 6664
No 9
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.33 E-value=2.8e-11 Score=113.25 Aligned_cols=130 Identities=15% Similarity=0.087 Sum_probs=100.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
+++++..+.|++.+.+.+++.++++++|+++||+||| +.+... .++......+.... ... ..+.+++.++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~--~~~~~~~~~~~~~~--~~~-~~~~l~~~r~ 139 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK-----WSIGIG--MFLSSVISIVIPWA--AGG-GIALVVFCRV 139 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc-----hhhHHH--HHHHHHHHHHHHHH--HHc-CchHHHHHHH
Confidence 6889999999999999999999999999999999999 663333 22211111111111 111 1236777889
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.+...++. ..++.|.+|++.|+++.++......+|..++|.+.+.+.+...||+.
T Consensus 140 ~~G~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~ 199 (465)
T TIGR00894 140 IQGLAQGSVSPAT---------HKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPM 199 (465)
T ss_pred HHHHhcccchhhH---------HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCe
Confidence 9999988776666 48999999999999999999999999999999999999875348886
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.33 E-value=3.2e-11 Score=110.74 Aligned_cols=129 Identities=15% Similarity=0.119 Sum_probs=100.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+++.+.++..+...++..+++++.|+++||+||| +++... ..+......... . . ...+.+++.
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~--~~~~~~~~~~~~--~--~-~~~~~l~~~ 114 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILF--AVLLTLSCLLVS--F--A-NSFSLLLIG 114 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHH--HHHHHHHHHHHH--H--H-ChHHHHHHH
Confidence 467899999999999999999999999999999999999 774333 222221111111 1 1 234477888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.|.+|+++|+++.++.....+++..++|.+++.+.+.. ||++
T Consensus 115 r~l~G~~~g~~~~~~---------~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~ 175 (394)
T PRK10213 115 RACLGLALGGFWAMS---------ASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRN 175 (394)
T ss_pred HHHHHHhhHHHHHHH---------HHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHH
Confidence 899999988665555 488899999999999999999999999999999999998864 6664
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.32 E-value=3.5e-11 Score=111.17 Aligned_cols=123 Identities=15% Similarity=0.015 Sum_probs=95.6
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.+.+.++..+++++.|+++||+||| +++... .++......... ... + .+.+.+.
T Consensus 35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~--~~~~~~~~~~~~--~~~--~-~~~l~~~ 102 (412)
T TIGR02332 35 GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGI--MVLWGIASTATM--FAT--G-PESLYLL 102 (412)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHH--HHHHHHHHHHHH--Hhc--C-HHHHHHH
Confidence 467899999999999999999999999999999999999 764332 222111111111 112 2 2367788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++.|++.+...+.. ..++.|.+|++.|+++.++.+....+|..+++.+.+++.+
T Consensus 103 r~l~G~~~~~~~~~~---------~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 103 RILVGIAEAGFLPGI---------LLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHhhHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999988665554 3788999999999999999999999999999999998875
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.32 E-value=4.1e-11 Score=111.40 Aligned_cols=129 Identities=18% Similarity=0.231 Sum_probs=98.1
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|..+.+++.+.+.++..+++++.|+++||+||| +++... ..+......+.. ... ..+.+.+.
T Consensus 50 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~--~~~~~~~~~~~~----~~~-~~~~l~~~ 117 (434)
T PRK11663 50 LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIG--LIATGIINILFG----FSS-SLWAFALL 117 (434)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHH--HHHHHHHHHHHH----HHh-HHHHHHHH
Confidence 467899999999999999999999999999999999999 663322 222221111111 111 23355666
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.+.+|+++|+++.++.+...++|..++|.+.+++.+.. ||++
T Consensus 118 ~~l~g~~~g~~~~~~---------~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~ 178 (434)
T PRK11663 118 WVLNAFFQGWGWPVC---------AKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRY 178 (434)
T ss_pred HHHHHHHHHccchHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHH
Confidence 777888877555544 488999999999999999999999999999999999998864 6665
No 13
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.32 E-value=1.3e-11 Score=110.05 Aligned_cols=129 Identities=18% Similarity=0.265 Sum_probs=100.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.+..+.+++.+...++..+++++.|+++||+||| +++... ..+......+..+. .+.. .+++.
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~--~~~~~~~~~~~~~~----~~~~-~~~~~ 91 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIG--LLLFALGSLLLAFA----SNFW-LLLIA 91 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHH--HHHHHHHHHHHHHH----CCHH-HHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeeh--hhhhhhHHHHhhhh----hhHH-HHhhh
Confidence 467899999999999999999999999999999999999 763333 22222221111111 2333 77888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...++. ..++.|.+|+++|++++++.+....+|..++|.+.+.+.+.. +|+.
T Consensus 92 ~~l~g~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~ 152 (352)
T PF07690_consen 92 RFLLGIGSGFFSPAS---------NALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRW 152 (352)
T ss_dssp HHHHHHHHHHHHHHH---------HHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCC
T ss_pred ccccccccccccccc---------cccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cccc
Confidence 999999988666666 499999999999999999999999999999999999998654 6665
No 14
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.31 E-value=5.9e-11 Score=107.59 Aligned_cols=129 Identities=18% Similarity=0.220 Sum_probs=98.7
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|+.+.+++.+++.++..++.++.|+++||+||| +++... .++......... . .++ .+.+.+.
T Consensus 18 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~--~~~~~i~~~~~~--~--~~~-~~~~~~~ 85 (377)
T PRK11102 18 AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGG--TLVFALAAVACA--L--AQT-IDQLIYM 85 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHH--HHHHHHHHHHHH--H--Hcc-HHHHHHH
Confidence 467899999999999999999999999999999999999 764333 222111111111 1 112 2366777
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.|.+|++.|+++.++.+....++..++|.+.+.+.+.. ||+.
T Consensus 86 ~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 146 (377)
T PRK11102 86 RFLHGLAAAAASVVI---------NALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHA 146 (377)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHH
Confidence 888898888665555 488999999999999999999999999999999999998864 5553
No 15
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=4.4e-11 Score=108.36 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=99.0
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+.+|++..+.+++.+...++..+++++.|+++||+||| +++.... .+......+.. .. .+ .+.+.+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~--~~~~~~~~~~~--~~--~~-~~~~~~~ 111 (398)
T TIGR00895 44 SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSI--LLFSVFTLLCA--LA--TN-VTQLLIL 111 (398)
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHH--HHHHHHHHHHH--Hc--cc-hHHHHHH
Confidence 456899999999999999999999999999999999999 6643332 22111111111 11 12 2356677
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. .+++.|.+|++.|+++.++......+|..+++.+.+++.+.. ||+.
T Consensus 112 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~ 172 (398)
T TIGR00895 112 RFLAGLGLGGLMPNL---------NALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRS 172 (398)
T ss_pred HHHHhcccccchhhH---------HHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-ccee
Confidence 888888887665655 489999999999999999999999999999999999998864 7765
No 16
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=3.7e-11 Score=109.78 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=98.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCC-CCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPD-DPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (279)
+++|+|+.+.+++.+.+.++..+++++.|+++||+||| +++...........+........+. .....+.+++.
T Consensus 44 ~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 118 (392)
T PRK12382 44 HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK-----RSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVG 118 (392)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch-----HHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Confidence 57899999999999999999999999999999999999 7743332211111001111111111 11234467788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
+++.|++.+...++. ..++.+.+|+++|+++.++.....+++..++|.+++++.+.. ||+
T Consensus 119 r~l~G~~~~~~~~~~---------~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~ 178 (392)
T PRK12382 119 RLILGFGESQLLTGA---------LTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFA 178 (392)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChH
Confidence 889999888655544 377889999999999999999888899999999999988754 554
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.30 E-value=8.7e-11 Score=106.40 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=98.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.+..+.+++.+.+.++..+++++.|+++||+||| +.+... ..+......... . .+ ..+.+.+.
T Consensus 32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~--~~~~~~~~~~~~--~--~~-~~~~~~~~ 99 (385)
T TIGR00710 32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLG--LFIFALSSLGLA--L--SN-NIETLLVL 99 (385)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHH--HHHHHHHHHHHH--H--Hc-cHHHHHHH
Confidence 467899999999999999999999999999999999999 764332 222111111111 1 12 23366777
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.|.+|++.|+++.++.+....++..++|.+.+.+.++. ||+.
T Consensus 100 ~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~ 160 (385)
T TIGR00710 100 RFVQAFGASAGSVIS---------QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHA 160 (385)
T ss_pred HHHHHcchhHHHHHH---------HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHH
Confidence 888898887665655 488999999999999999999999999999999999988864 5553
No 18
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.29 E-value=2.5e-11 Score=113.63 Aligned_cols=129 Identities=15% Similarity=0.121 Sum_probs=101.2
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.+..+.+++.+.+.++..++.++.|+++||+||| +.+... ..+......+. . ..++ .+.+.+.
T Consensus 29 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~~~~~~~--~--~~~~-~~~l~~~ 96 (485)
T TIGR00711 29 AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLIS--TFAFTLGSLLC--G--VAPN-LELMIIF 96 (485)
T ss_pred HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHH--HHHHHHHHHHH--h--CcCC-HHHHHHH
Confidence 457899999999999999999999999999999999999 764333 22211111111 1 1222 3367788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.|.+|++.|+++.++......++..++|.+.|++.++. ||++
T Consensus 97 ~~~~G~~~~~~~~~~---------~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~ 157 (485)
T TIGR00711 97 RVIQGFGGGPLIPLS---------FSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRW 157 (485)
T ss_pred HHHHHhhhhhHHHHH---------HHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Ccee
Confidence 899999988666655 489999999999999999999999999999999999998864 8876
No 19
>PRK10054 putative transporter; Provisional
Probab=99.29 E-value=1.6e-10 Score=106.16 Aligned_cols=127 Identities=18% Similarity=0.176 Sum_probs=91.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|++..+.|++.+...+++.+++++.|+++||+||| +++..... +.... .+.+ . ..++ .+..++.+
T Consensus 36 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~--~~~~~-~~~~-~--~~~~-~~~~~~~~ 103 (395)
T PRK10054 36 RQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT--AFASG-FIAI-P--LVNN-VTLVVLFF 103 (395)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH--HHHHH-HHHH-H--HHhH-HHHHHHHH
Confidence 46899999999999999999999999999999999999 76433222 21111 1111 1 1112 22344445
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|.+.+...++. +.+..|.+|++.|++++++.+...++|..++|.+.+++.+ .||+.
T Consensus 104 ~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~ 162 (395)
T PRK10054 104 ALINCAYSVFSTVL---------KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINL 162 (395)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCc
Confidence 55565555444444 4888999999999999999999999999999999998875 47765
No 20
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1e-10 Score=109.32 Aligned_cols=130 Identities=22% Similarity=0.246 Sum_probs=104.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+.++..+.+++++.+..|++++.+.+|++.||+|-| +++ ..+.++......+.-+..... .+.+++.++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~--~~~~~~sa~~t~l~P~aa~~~---~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVF--FISGLISALLTLLTPLAASIG---FYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHH--HHHHHHHHHHHHHHHHHHHhc---chhhHHHHH
Confidence 5788999999999999999999999999999999999 773 333333222222222221111 126788999
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.+...++.. .+.....|+++|++..++......+|..++-++.|.+.+..+||+.
T Consensus 137 lqGl~~g~~~pa~~---------~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIG---------SILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred HhHHHHhHHHhhhh---------ceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 99999998888874 9999999999999999999999999999999999999998569987
No 21
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1.3e-11 Score=111.24 Aligned_cols=129 Identities=17% Similarity=0.229 Sum_probs=103.0
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.++.|+|.++.|++.+++.+.+.++-++.|.++||.+.| +. ..++++++..+..+.. .++ ..+++.+.
T Consensus 56 ~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~f--m~~gLilsai~nil~G----fs~-s~~~~~~l 123 (448)
T COG2271 56 IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YF--MAFGLILSAIVNILFG----FSP-SLFLFAVL 123 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----ee--ehHHHHHHHHHHHHHh----hhh-HHHHHHHH
Confidence 356779999999999999999999999999999999999 66 3444443332222221 222 44578888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH--HHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV--GLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~--g~l~~~~~g~~~ 153 (279)
.++.|++.|+..|+. ...+...+|+++||+..|+.+...++|+++.|++. +++..+. +|+.
T Consensus 124 ~~lng~fQg~Gwpp~---------~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~ 186 (448)
T COG2271 124 WVLNGWFQGMGWPPC---------ARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRA 186 (448)
T ss_pred HHHHHHHhcCCCcHH---------HHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhH
Confidence 999999999777766 48899999999999999999999999999999999 8887765 6665
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=1.2e-10 Score=106.67 Aligned_cols=128 Identities=14% Similarity=0.089 Sum_probs=96.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+++.+.+++.+...++..+++++.|+++||+||| +++..... +......... . ..+ .+.+.+.
T Consensus 42 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~--~~~~~~~~~~--~--~~~-~~~~~~~ 109 (406)
T PRK11551 42 AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-----RILIVSVA--LFGLFSLATA--Q--AWD-FPSLLVA 109 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHH--HHHHHHHHHH--H--hcc-HHHHHHH
Confidence 356899999999999999999999999999999999999 77443322 2111111111 1 122 3366778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
+++.|++.+...+.. ..++.|.+|++.|+++.++.+....+|..+++.+.+.+.+.. +|+
T Consensus 110 ~~l~G~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 169 (406)
T PRK11551 110 RLLTGVGLGGALPNL---------IALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWR 169 (406)
T ss_pred HHHHHhhHHHHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHH
Confidence 888999888665555 488999999999999999999999999999988887776543 444
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.27 E-value=9.4e-11 Score=108.14 Aligned_cols=128 Identities=22% Similarity=0.181 Sum_probs=97.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|+.+.+++.++..++..+++++.|+++||+||| +++.... ++......... . . ...+.+.+.+
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~--~~~~~~~~~~~--~--~-~~~~~l~~~r 113 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSI--VAYSVGTGLSG--L--A-SGVIMLTLSR 113 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH--HHHHHHHHHHH--H--H-hHHHHHHHHH
Confidence 57899999999999999999999999999999999999 7743332 22111111111 1 1 1234778889
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..++.|.+|++.|+++.++......+|..+++.+.+.+.+.. ||++
T Consensus 114 ~l~G~g~g~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~ 173 (426)
T PRK12307 114 FIVGMGMAGEYACA---------STYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRA 173 (426)
T ss_pred HHHHHHHhhHHHHH---------HHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHH
Confidence 99999888655555 488999999999999999999988999999998888887754 6654
No 24
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.26 E-value=6.6e-11 Score=108.33 Aligned_cols=132 Identities=17% Similarity=0.071 Sum_probs=97.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHH-HHHHHHHHHHHhCCCC--CchhHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFG-SGIPIAAVLLLFLPDD--PSTGFMRG 80 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~ 80 (279)
+++|.|+.+.+++.+++.++..+++++.|+++||+||| +++....... ++.. .......... ....+.++
T Consensus 44 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r-----~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 44 DQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK-----KAVVFGLCGCALSGL--LYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc-----chHHHHHHHHHHHHH--HHHHhhhhhccchhHHHHHH
Confidence 56899999999999999999999999999999999999 7744332211 1111 1111111111 11233667
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
+.+++.|++.+...++. ..++.|.+|+++|+++.++......+|..++|.+++.+.+.. ||+
T Consensus 117 ~~r~l~G~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~ 178 (399)
T PRK05122 117 LGRLLLGIGESLAGTGS---------ILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-GLA 178 (399)
T ss_pred HHHHHHHhhHHhhcchH---------HHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-cHH
Confidence 78889999888666655 377789999999999999988888889899999999998764 554
No 25
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.26 E-value=6.8e-11 Score=110.66 Aligned_cols=132 Identities=16% Similarity=0.090 Sum_probs=92.7
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLA--KRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
.++.|++..+.+++.++.+++.+++++++|+++||.. +| +......+.+..... .+... ...+ .+.+.
T Consensus 268 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~--~ll~~--~~~~-~~~~~ 337 (455)
T TIGR00892 268 AKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLT--HLLCA--LAGD-YTGLV 337 (455)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHH--HHHHH--Hhch-HHHHH
Confidence 4557999999999999999999999999999999742 23 222222222221111 11111 1122 22455
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+..++.|++.+...+.. +.++.|.+|++.+++++|+.+...+++..++|.+.|.+.+...+|+.
T Consensus 338 i~~~~~G~~~g~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 401 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALL---------FEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKY 401 (455)
T ss_pred HHHHHHHHHhchHHHHH---------HHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcch
Confidence 66777788877554544 48888999999999999999999999999999999999886534554
No 26
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.26 E-value=9.7e-11 Score=108.95 Aligned_cols=133 Identities=19% Similarity=0.178 Sum_probs=94.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
++.|+++.+.+++.+++.++..+++++.|+++||+||| +++.. +.++......... ..+......+.+.+.+
T Consensus 54 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 125 (438)
T TIGR00712 54 VEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPA--GLILSAAVMLLMG-FVPWATSSIAIMFVLL 125 (438)
T ss_pred HHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHH--HHHHHHHHHHHHh-ccccccchHHHHHHHH
Confidence 34699999999999999999999999999999999999 66332 2222111111111 1111112233555667
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ...+.|.+|++.|+++.++.+...++++.+++.+.+.+.+...+|+.
T Consensus 126 ~l~g~~~g~~~~~~---------~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~ 186 (438)
T TIGR00712 126 FLNGWFQGMGWPPC---------GRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHA 186 (438)
T ss_pred HHHHHHhhcchHHH---------HHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHH
Confidence 78888877554444 37788999999999999999999999999999888876554345654
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=9.6e-11 Score=106.94 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=98.2
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.+...++..+++++.|++.||+||| +++... ..+......+.. . .+ ..+.+++.
T Consensus 30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~~~~~l~~--~--~~-~~~~l~~~ 97 (382)
T PRK10091 30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFL--VALCVIGNAMFT--L--SS-SYLMLAIG 97 (382)
T ss_pred HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHH--HHHHHHHHHHHH--H--hC-cHHHHHHH
Confidence 457899999999999999999999999999999999999 774332 222221111111 1 12 23467778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.+..|+++|+++.++......++..++|++.+++.+.. ||+.
T Consensus 98 r~l~G~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~ 158 (382)
T PRK10091 98 RLVSGFPHGAFFGVG---------AIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRY 158 (382)
T ss_pred HHHHHhhhHHHHHHH---------HHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHH
Confidence 899999888555544 377889999999999999999889999999999999988754 6654
No 28
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=1.5e-11 Score=110.60 Aligned_cols=129 Identities=15% Similarity=0.149 Sum_probs=95.7
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.++..++..+++++.|+++||+||| +++.... .+......+.. ... ..+.+++.
T Consensus 22 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~--~~~~~~~~~~~--~~~---~~~~~~~~ 89 (379)
T TIGR00881 22 VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGL--ILCAIVNLFFG--FST---SLWVMAAL 89 (379)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHH--HHHHHHHHHHH--Hhh---hHHHHHHH
Confidence 356899999999999999999999999999999999999 6643332 22111111111 111 23367778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHH-HHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPP-VVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~-~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. .+++.|.+|++.|+++.++.+....+|..++|. +.+.+.+. .+|+.
T Consensus 90 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~ 151 (379)
T TIGR00881 90 WALNGIFQGMGWPPC---------GRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHW 151 (379)
T ss_pred HHHHHhhccccCCch---------HHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchh
Confidence 888899888666655 489999999999999999999999999999995 55555443 36664
No 29
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.25 E-value=2.7e-10 Score=107.86 Aligned_cols=124 Identities=17% Similarity=0.114 Sum_probs=91.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC-chhHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP-STGFMRGLVLVI 85 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i 85 (279)
..+..+.+++.+...++.+++++++|+++||+||| +.+... .++......+........+ ...+.+++.+++
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr-----~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l 124 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRK-----RVYGME--LIIMIIATVASGLSPGSSPKSVMATLCFWRFW 124 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH-----HHHHHH--HHHHHHHHHHHHHccCcccchHHHHHHHHHHH
Confidence 45566788999999999999999999999999999 764332 2221211121111111111 113478889999
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
.|++.+...+.. +.+++|.+|++.|+++.++.+....+|..+++.+..++..
T Consensus 125 ~G~~~g~~~~~~---------~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 125 LGVGIGGDYPLS---------AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred HHHHHhhhhHHH---------HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999666655 5999999999999999999999999999999888877654
No 30
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=2.1e-10 Score=107.38 Aligned_cols=125 Identities=16% Similarity=0.150 Sum_probs=91.1
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH----hC---CCCCchhH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLL----FL---PDDPSTGF 77 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~ 77 (279)
.++.+..+.+++.+.+.++..++++++|+++||+||| +++........ ........ .. ........
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr-----~~~~~~~~l~~--i~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR-----DSLKIAAVLFF--ISALGSAWPEFGFTSIGPDNTGYVP 121 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH--HHHHHHHhhccccccccccchhHHH
Confidence 3588999999999999999999999999999999999 77443322211 11111111 00 01112233
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
.+++.+++.|++.+...+.. .++++|.+|++.|+++.++......+|..+++.+.+.+.
T Consensus 122 ~l~~~R~l~G~~~g~~~~~~---------~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 122 EFVIYRIIGGIGVGLASMLS---------PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HHHHHHHHHhhhHhHHhhHH---------HHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788999999999666655 489999999999999999999888888888876655543
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.24 E-value=3e-10 Score=107.30 Aligned_cols=127 Identities=9% Similarity=0.124 Sum_probs=85.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.....++..++.+++|+++||+||| +.+......... .....+... ...+ ...+.+.+
T Consensus 279 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~--~~~~~~~~~-~~~~-~~~~~~~~ 349 (490)
T PRK10642 279 HNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFV--LAIPAFILI-NSNV-IGLIFAGL 349 (490)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHH--HHHHHHHHH-hCCC-HHHHHHHH
Confidence 35688888888888888899999999999999999999 663332211111 111111111 1112 22445556
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.|++.+...... ..+..|.+|++.|+++.++.+.+..+++.++|.+.+++.+..
T Consensus 350 ~~~g~~~~~~~g~~---------~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 350 LMLAVILNCFTGVM---------ASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666554332223 377789999999999999877777788889999999998754
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.24 E-value=2.3e-10 Score=105.74 Aligned_cols=128 Identities=16% Similarity=0.089 Sum_probs=97.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
++++.+..+.++..+++.+++.+++++.|+++||+||| +++... ..+......... . .++ .+.+.+.+
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~--~~~~~~~~~~~~--~--a~~-~~~l~~~r 111 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITG--ALIFTLACAATL--F--TTS-MTQFLIAR 111 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHH--HHHHHHHHHHHH--H--cCC-HHHHHHHH
Confidence 46789999999999999999999999999999999999 764333 222111111111 1 122 33677888
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. +.++.|.+|++.++++.++......++..++|.+++.+.++. ||++
T Consensus 112 ~l~Gi~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~ 171 (413)
T PRK15403 112 FIQGTSICFIATVG---------YVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKV 171 (413)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHH
Confidence 99998877544433 477889999999999999999999999999999999988754 6664
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.23 E-value=2.5e-10 Score=104.77 Aligned_cols=129 Identities=14% Similarity=0.080 Sum_probs=97.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|..+.+++.+.+.++..+++++.|+++||+||| +++... ..+......... ..++ .+.+++.
T Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r-----~~l~~~--~~l~~~~~~~~~----~a~~-~~~ll~~ 103 (393)
T PRK09705 36 RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER-----RSVAIS--LLLIAVGALMRE----LYPQ-SALLLSS 103 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch-----HHHHHH--HHHHHHHHHHHH----HCcc-hHHHHHH
Confidence 356899999999999999999999999999999999999 774333 332222212111 1222 2266778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.+.+| ++|+++.++......+|..+++.+.+++.++..+|+.
T Consensus 104 r~l~Gig~~~~~~~~---------~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 104 ALLGGVGIGIIQAVM---------PSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHhHHHHHhhhh---------hHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 999999988666555 377788887 7799999999999999999999999998876545654
No 34
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=7.2e-11 Score=110.75 Aligned_cols=129 Identities=12% Similarity=0.050 Sum_probs=95.8
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.|++.+.+.+++.++++++|+++||+||| +++........ +............. ...+.+++.
T Consensus 56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~~ 128 (467)
T PRK09556 56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK-----QFLPFLLILSA-ICMLGFGASLGSGS-VSLGLMIAL 128 (467)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc-----chHHHHHHHHH-HHHHHHHHHHhccc-chHHHHHHH
Confidence 457899999999999999999999999999999999999 76333221111 11111111111112 234477788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
+++.|++.+...++. ..++.+.+|+++|+++.|+.....++|..+++.+..++...
T Consensus 129 r~l~G~~~~~~~~~~---------~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 129 WALSGFFQSTGGPCS---------YSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHhccchHH---------HHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 889999888665655 38899999999999999999999999999998888776654
No 35
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.23 E-value=1.6e-10 Score=109.37 Aligned_cols=128 Identities=14% Similarity=0.092 Sum_probs=96.8
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|.+..+.+++.+.+.++..++.+++|+++||+||| +++..... +......+.. . .+ ..+.+++.+
T Consensus 34 ~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~--~~~~~~~~~~--~--a~-~~~~li~~r 101 (495)
T PRK14995 34 MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGT--LFGLASLAAA--F--SP-TASWLIATR 101 (495)
T ss_pred HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHH--HHHHHHHHHH--H--cC-CHHHHHHHH
Confidence 56889999999999999999999999999999999999 77443332 2221112211 1 12 233777888
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcc-cCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEI-VPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ...+.+. .|++.|+++.|+......+|..++|.++|++.++. ||++
T Consensus 102 ~l~G~g~~~~~~~~---------~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~ 162 (495)
T PRK14995 102 ALLAIGAAMIVPAT---------LAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGS 162 (495)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHH
Confidence 99999888655544 2445455 47899999999999999999999999999999875 7775
No 36
>TIGR00898 2A0119 cation transport protein.
Probab=99.22 E-value=4e-10 Score=106.47 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=91.4
Q ss_pred eccCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 4 ELSGFS---HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 4 ~~~g~s---~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
++++++ ..+.+++.+++.++.++++++.|+++||+||| +++... .++......+.. ..+ ..+.++
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr-----~~~~~~--~~~~~i~~~~~~----~~~-~~~~~~ 184 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK-----KVLLLS--TLVTAVSGVLTA----FSP-NYTVFL 184 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch-----HHHHHH--HHHHHHHHHHHH----Hcc-cHHHHH
Confidence 467787 88999999999999999999999999999999 774332 222221111111 112 234778
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.+++.|++.+...+.. ..++.|.+|++.|+.+.++......+|..++|.+.+.+.+
T Consensus 185 ~~r~l~G~~~~~~~~~~---------~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQA---------VVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred HHHHHHHhhccchHHHH---------HHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 88999999988655555 5899999999999999999888888888888877665543
No 37
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.22 E-value=5.1e-10 Score=103.03 Aligned_cols=126 Identities=14% Similarity=0.182 Sum_probs=95.8
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|..+.|++.++..+...+.++++|+++||+||| +++.... .+......... . .++ .+.+.+.+
T Consensus 39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~--~~~~~~~~~~~--~--~~~-~~~l~~~~ 106 (400)
T PRK11646 39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGM--LMRAAGFATMA--I--AHE-PWLLWLSC 106 (400)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHH--HHHHHHHHHHH--H--hcc-HHHHHHHH
Confidence 56899999999999999999999999999999999999 7743332 22221111111 1 122 33566778
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
++.|++.+...++. .+++.+.+|++.|+++.|+.+...+++..++|.++|++. .. ||+
T Consensus 107 ~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~ 164 (400)
T PRK11646 107 ILSGLGGTLFDPPR---------TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFR 164 (400)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHH
Confidence 88888877555544 488899999999999999999999999999999999998 33 554
No 38
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.22 E-value=3.6e-10 Score=106.03 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=85.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+++++.+...++++++.+++|+++||++|| +.+......... ........ ...+. +...+.+
T Consensus 287 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-----~~~~~~~~~~~~--~~~~~~~~--~~~~~-~~~~~~~ 356 (467)
T PRK09556 287 QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-----RALVACIALALI--IFTLGVYQ--HATSE-YMYLASL 356 (467)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----chHHHHHHHHHH--HHHHHHHH--hcCcH-HHHHHHH
Confidence 46899999999999999999999999999999999998 553322211111 11111111 11222 2344556
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHH-HHhhHHHHHHHHHH
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESI-LSSIAPPVVGLLAH 146 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~-g~~i~~~~~g~l~~ 146 (279)
++.|++........ .....|.+|++.++++.|+.+.+.++ |..++|.+.|.+.+
T Consensus 357 ~~~G~~~~~~~~~~---------~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 357 FALGFLVFGPQLLI---------GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHhhHHHHH---------HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 66665432221111 25567999999999999999999997 66899999999998
No 39
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.22 E-value=1.5e-10 Score=108.98 Aligned_cols=129 Identities=14% Similarity=0.203 Sum_probs=87.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.+...++.+++++++|+++||+||| +++... ..+....... .... .. ...+.....+
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~--~~~~~~~~~~-~~~~-~~-~~~~~~~~~~ 373 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR-----KAYVCS--LLISQLLIIP-VFAI-GG-ANVWVLGLLL 373 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHH--HHHHHHHHHH-Hhhc-cc-cHHHHHHHHH
Confidence 47899999999999999999999999999999999998 663332 2221111111 1111 11 2221222333
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
++.++......+.. +.+++|.+|++.|++++|+.+....+|+.++|.+.|.+.++. ||.
T Consensus 374 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~ 432 (496)
T PRK03893 374 FFQQMLGQGISGLL---------PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLG 432 (496)
T ss_pred HHHHHHhcccchhh---------HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChH
Confidence 33222221112222 477889999999999999999999999999999999999875 444
No 40
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.22 E-value=2.6e-10 Score=104.23 Aligned_cols=129 Identities=12% Similarity=0.135 Sum_probs=95.6
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.+..+.++..+.+.++..+++++.|+++||+||| +.+... ..+......... ..++ .+.+.+.
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~--~~~~~i~~~~~~----~~~~-~~~~~~~ 97 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPG--AALFIIASLLCS----LAET-SSLFLAG 97 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHH--HHHHHHHHHHHH----HhCc-HHHHHHH
Confidence 356899999999999999999999999999999999999 764332 222111111111 1122 2255667
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. +.++.|.+|++.|+++.++.+....++..++|.+.+.+.+.. ||+.
T Consensus 98 ~~l~g~~~~~~~~~~---------~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~ 158 (392)
T PRK10473 98 RFLQGIGAGCCYVVA---------FAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQS 158 (392)
T ss_pred HHHHHhhhhHHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHH
Confidence 788888877555444 488999999999999999999999999999999988887654 5554
No 41
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.21 E-value=3.7e-10 Score=104.47 Aligned_cols=126 Identities=15% Similarity=0.099 Sum_probs=99.8
Q ss_pred eccCCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGS-TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++|+|..+ .|.+.+.+..++.++.+++|+++||+|.| +++........ .+.++..+ . ...+.+.+.
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Ws--l~t~L~~f----a-~Sl~~L~i~ 121 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFV--CVWLLLLL----G-TSVWHMQLM 121 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHH--HHHHHHHH----H-HHHHHHHHH
Confidence 478999999 99999999999999999999999999999 77433322222 11121111 1 124478889
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+... +. ..++...+|++.|+++.|+.+....+|..+++++++++. . +||+.
T Consensus 122 R~llGvaEA~~~-A~---------~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-~gWr~ 180 (511)
T TIGR00806 122 EVFYSVTMAARI-AY---------SSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-LGWIS 180 (511)
T ss_pred HHHHHHHHHHHH-HH---------HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cCchh
Confidence 999999999766 44 599999999999999999999999999999999999944 3 48875
No 42
>PRK03699 putative transporter; Provisional
Probab=99.21 E-value=4.1e-10 Score=103.22 Aligned_cols=129 Identities=13% Similarity=0.190 Sum_probs=96.4
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|..+.+++.+...++..++++++|++.||+||| +++... ..+......+.. . .+ ..+.+.+.+
T Consensus 35 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----~~~~~~--~~~~~i~~~l~~--~--~~-~~~~~~~~~ 102 (394)
T PRK03699 35 EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK-----RQLIFG--FALMILAVAGLM--F--SH-SLALFSIAM 102 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHH--HHHHHHHHHHHH--H--cc-hHHHHHHHH
Confidence 56899999999999999999999999999999999999 764332 222111111111 1 12 233667778
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..++.|.+|++.|+++.++.+....+++.++|.+.+.+.....||+.
T Consensus 103 ~l~G~~~g~~~~~~---------~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 103 FVLGVVSGITMSIG---------TFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred HHHHHhhHhhccch---------hHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 88898888655544 47889999999999999988888888889999999888764446664
No 43
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=2.3e-10 Score=105.87 Aligned_cols=117 Identities=17% Similarity=0.239 Sum_probs=87.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
+.+..+.+++.+++.++..+++++.|+++||+||| +++........ ....+.. .... ....+.+++.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr-----~~~~~~~~~~~--~~~~~~~-~~~~-~~~~~~~~~~r~l~ 137 (481)
T TIGR00879 67 SYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK-----KSLLIIALLFV--IGAILMG-LAAF-ALSVEMLIVGRVLL 137 (481)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH-----HHHHHHHHHHH--HHHHHHH-Hhcc-ccchHHHHHHHHHH
Confidence 35589999999999999999999999999999999 76433322211 1111111 1112 22223677788999
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
|++.+...+.. ..++.|.+|++.|+++.++.+....+|..+++.+.
T Consensus 138 G~~~~~~~~~~---------~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 138 GIGVGIASALV---------PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HhhhhHHHhHH---------HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99888665555 48999999999999999999999999999999887
No 44
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.20 E-value=6.1e-10 Score=102.33 Aligned_cols=129 Identities=18% Similarity=0.155 Sum_probs=96.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.++++.|..+.++..+.+.++..+++++.|+++||+||| +++.... .+......... . .++ .+.+.+.
T Consensus 40 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~--~~~~~~~~~~~--~--~~~-~~~l~~~ 107 (406)
T PRK15402 40 VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR-----PVMLAGV--AFFILTCLAIL--L--AQS-IEQFTLL 107 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH--HHHHHHHHHHH--H--Hcc-HHHHHHH
Confidence 467899999999999999999999999999999999999 7743332 22111111111 1 112 2356677
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. +.++.|.+|++.|.++.++......++..++|.+.+.+.++. +|++
T Consensus 108 ~~l~G~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~ 168 (406)
T PRK15402 108 RFLQGIGLCFIGAVG---------YAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRG 168 (406)
T ss_pred HHHHHhHhhhHHHHH---------HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccH
Confidence 888888877554444 478889999999999999988888888899999999988854 7775
No 45
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.20 E-value=4.2e-10 Score=102.89 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=95.8
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|+.+.+++.+.+.++..+++++.|+++||+||| +.+... ............ . .++ .+.+.+.
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~--~~~~~~~~~~~~--~--~~~-~~~l~~~ 102 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVG--MSIFILGTLVAL--F--AHS-LTVLIAA 102 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHH--HHHHHHHHHHHH--H--Hcc-HHHHHHH
Confidence 457899999999999999999999999999999999999 764333 222111111111 1 112 3366777
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..+..|..+.+.++++.++.+....++..++|.+.+.+.+.. ||+.
T Consensus 103 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~ 163 (394)
T PRK11652 103 SAIQGLGTGVGGVMA---------RTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRA 163 (394)
T ss_pred HHHHHhhhhHHHHHH---------HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHH
Confidence 888888877554444 367788888899999999988888888899999999988754 6654
No 46
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.20 E-value=6.8e-10 Score=98.49 Aligned_cols=129 Identities=22% Similarity=0.302 Sum_probs=99.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.++.|.++.+.+++.+...++..+++++.|+++||+||| +.+... ..+........... ...+.+.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r-----~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~ 92 (352)
T cd06174 25 LAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR-----RVLLLG--LLLFALGSLLLAFA-----SSLWLLLV 92 (352)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc-----hhhHHH--HHHHHHHHHHHHHh-----ccHHHHHH
Confidence 3456789999999999999999999999999999999999 653322 22222111111111 22336777
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+++.|++.+...+.. ..++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|+
T Consensus 93 ~~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 153 (352)
T cd06174 93 GRFLLGLGGGALYPAA---------AALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWR 153 (352)
T ss_pred HHHHHHcccccccHhH---------HHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHH
Confidence 8888898888666655 489999999999999999999999999999999999998865 444
No 47
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.20 E-value=4.6e-10 Score=101.12 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=90.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|+.+.+++.++..++..++++++|+++||+||| +.+... ..+......... . .....+.+.+.
T Consensus 29 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~i~~~~~~-~---~~~~~~~~~~~ 97 (366)
T TIGR00886 29 KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLS--LLLLAIPCLWAG-L---AVQSYSVLLLL 97 (366)
T ss_pred HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHH--HHHHHHHHHHHH-H---HhhhHHHHHHH
Confidence 357899999999999999999999999999999999999 663332 222111111111 1 11023366677
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++.|++.+...+ . ..++.+.+|+++|+++.++.....++|..+++.+.+.+..
T Consensus 98 ~~~~g~~~~~~~~-~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 98 RLFIGIAGGSFAS-C---------MPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHhchhhHh-H---------HHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 8888887554333 3 3788999999999999999998888888888888877765
No 48
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.18 E-value=2.7e-10 Score=107.23 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=93.8
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
+|++..+++++.+.+.+++.++++++|+++|| +||| +.+... ..+......+. ... ++ .+.+.+.++
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~~--~~~~~~g~~~~--~~~--~~-~~~~~~~~~ 110 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVLG--GIVLMLGHFML--AMS--IY-PDLIFYGLG 110 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHHH--HHHHHHHHHHH--Hhc--cc-HhHHHHHHH
Confidence 79999999999999999999999999999999 8999 763333 22211111111 111 11 224556677
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCc---hhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERS---RTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.+...++. .+++++.+|++. |++++++.+...++|..++|.+.|++.++. ||+.
T Consensus 111 l~g~g~g~~~~~~---------~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~ 172 (475)
T TIGR00924 111 TIAVGSGLFKANP---------SSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHV 172 (475)
T ss_pred HHHhccccccCCH---------HHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHH
Confidence 7888877655544 478889988754 888999999999999999999999998865 5554
No 49
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.18 E-value=7.2e-10 Score=102.48 Aligned_cols=126 Identities=17% Similarity=0.032 Sum_probs=97.0
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|..+.+++.+...+++.+++++.|++.||+||| +.+.... .+......+.. ..... ..++.+++.
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~--~l~~~g~~l~~-~~~~~-~~~~~~l~~ 100 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGL--FLYALGAFLFW-PAAEI-MNYTLFLVG 100 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHH--HHHHHHHHHHH-HHHhh-ccHHHHHHH
Confidence 457899999999999999999999999999999999999 7643332 22111111111 11111 223467788
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++.|++.+...+..| +++.+..|++.|++..++.+.+.++|..++|.+.+.+..
T Consensus 101 ~~l~G~g~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 101 LFILTAGLGFLETAAN---------PYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHHHhhHHHHHhhhh---------HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999887766665 888899999999999999999999999999999998865
No 50
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.18 E-value=3.7e-10 Score=106.32 Aligned_cols=128 Identities=18% Similarity=0.130 Sum_probs=97.8
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|..+.+++.+...++..+++++.|+++||+||| +++... ..+......... . . ...+.+.+.+
T Consensus 48 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~~~~~~~~--~--~-~~~~~l~~~~ 115 (496)
T PRK03893 48 GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR-----LAMVIS--IVLFSVGTLACG--F--A-PGYWTLFIAR 115 (496)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH--HHHHHHHHHHHH--H--H-hHHHHHHHHH
Confidence 56899999999999999999999999999999999999 763332 222111111111 1 1 1234677788
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..++.|.+|++.|+++.++......+|..++|.+.+.+.+.. ||+.
T Consensus 116 ~l~G~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~ 175 (496)
T PRK03893 116 LVIGMGMAGEYGSS---------ATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-GWRA 175 (496)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHH
Confidence 88999877555544 488999999999999999999999999999999999988754 5553
No 51
>PRK10504 putative transporter; Provisional
Probab=99.17 E-value=5.7e-10 Score=104.51 Aligned_cols=130 Identities=14% Similarity=0.073 Sum_probs=99.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|.++.+.+++.+.+.++..++.+++|+++||+||| +++... ..+........ ... .+ .+.+.+
T Consensus 36 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~--~~~~~~~~~~~--~~~--~~-~~~l~~ 103 (471)
T PRK10504 36 MAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTA--IVLFTLGSLFC--ALS--GT-LNELLL 103 (471)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHH--HHHHHHHHHHH--HHh--CC-HHHHHH
Confidence 3567899999999999999999999999999999999999 764332 22211111111 111 22 235667
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++.|++.+...+.. ..++.|.+|++.|++++++.+...+++..++|.+.|.+.++. ||++
T Consensus 104 ~~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~ 165 (471)
T PRK10504 104 ARVLQGVGGAMMVPVG---------RLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHW 165 (471)
T ss_pred HHHHHHhhhHHHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHH
Confidence 7888999888655544 488899999999999999999999999999999999998865 5554
No 52
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.17 E-value=9.2e-10 Score=103.67 Aligned_cols=122 Identities=9% Similarity=-0.038 Sum_probs=88.1
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|++..+.+++.+.+.+++.++++++|+++||+||| +++.. +.++......+.. ... + .+.+.+.
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r-----~~~~~--~~~~~~~~~~~~~--~~~--s-~~~l~~~ 130 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR-----YGSAF--LLMLTAPAVFCMS--LVS--S-ATGFIAV 130 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHH--HHHHHHHHHHHHH--Hhc--C-HHHHHHH
Confidence 457899999999999999999999999999999999999 66333 2222111111111 111 2 2255566
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++.|++.+...+ . ..++.|.+|++.|+++.++.+...++|+.+++.+.+.+..
T Consensus 131 r~l~G~~~~~~~~-~---------~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~ 184 (476)
T PLN00028 131 RFFIGFSLATFVS-C---------QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFP 184 (476)
T ss_pred HHHHHHHHHhhHH-H---------HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888887764333 2 3678899999999999999998888888888877766644
No 53
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=2.6e-10 Score=102.98 Aligned_cols=132 Identities=27% Similarity=0.445 Sum_probs=98.2
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL--AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
.|..|+|...+++..+++-++++.|++++||++||+ ||| ... ..+.+ +++.+..+.....+.. ..++..
T Consensus 280 ~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-----~p~-~~i~~-~~i~~~~~~~w~~~~~--~~~l~~ 350 (448)
T COG2271 280 SEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-----GPM-ALIFM-LLITASLVLYWLAPNG--SYLLDA 350 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-----chH-HHHHH-HHHHHHHHHHHcCCCc--cHHHHH
Confidence 456899999999999999999999999999999997 455 331 22222 2222222222222222 234778
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHH-HHhhHHHHHHHHHHHhhCCCC
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESI-LSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~-g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++++++|+........+ -....|.+|++.-|++.|+...+..+ |.+.+....|++.|. +||.+
T Consensus 351 ~~l~~iGf~IyGPqmLi---------Gl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-~gW~g 414 (448)
T COG2271 351 ILLFIIGFLIYGPQMLI---------GLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-WGWDG 414 (448)
T ss_pred HHHHHHHHHHhhHHHHH---------HHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-CCCcc
Confidence 88889998877555444 37788999999999999999999999 777889999999997 58886
No 54
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.17 E-value=3.3e-10 Score=104.53 Aligned_cols=134 Identities=19% Similarity=0.118 Sum_probs=96.1
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.++++.++.+.|++.+...++..+++++.|+++||+||| +++........ +.............+ ..+.+.+.
T Consensus 44 ~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~-----~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~ 116 (417)
T PRK10489 44 IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRK-----KLILLARGTCG-LGFIGLALNAFLPEP-SLLAIYLL 116 (417)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCc-----eEEEehHHHHH-HHHHHHHHHHHcCCC-cHHHHHHH
Confidence 456678999999999999999999999999999999999 65332211111 111111111111122 23356667
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...++. ..++.+.+|++.|+++.++.+...+++..++|.++|.+.+.. ||++
T Consensus 117 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~ 177 (417)
T PRK10489 117 GLWDGFFGSLGVTAL---------LAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAW 177 (417)
T ss_pred HHHHHHHHHHHHHHH---------hhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHH
Confidence 778888777555554 378899999999999999999999999999999999998864 5543
No 55
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.1e-09 Score=102.03 Aligned_cols=162 Identities=20% Similarity=0.327 Sum_probs=107.5
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC--CchhH--H
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD--PSTGF--M 78 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~ 78 (279)
++..|++..++.++....++...+.++++.++.||+||| ++++..........+.+.....+... .+..+ +
T Consensus 297 ~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 297 FKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 456799999999999999999999999999999999999 77555443322222222222222111 12222 2
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCCCCccc
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKPVPKEA 158 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~~~~~~ 158 (279)
.....++..++.|..+. . |-+.+|.+|++.|..+.++..++.++...+.......+.+.. |-
T Consensus 372 ~~~~~~~~~f~~G~gpi--~--------~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-g~------- 433 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPI--P--------WFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-GP------- 433 (485)
T ss_pred HHHHHHHHhhhcCCCch--h--------HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-------
Confidence 33344455555554444 4 799999999999999999999999998887777777777654 11
Q ss_pred cCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHh
Q 037387 159 SNSAEVETDRENAASLAKALYTAIGIPMAICCFIYSFLYCTYPRERERAR 208 (279)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (279)
.+++.+.++ +++...+.++..||+|.+..
T Consensus 434 ------------------~~filF~i~---~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 434 ------------------YVFILFVIP---LAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred ------------------hhhHHHHHH---HHHHHHHHHHhCcccCCCCH
Confidence 111222222 33345566777999987765
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.16 E-value=4.2e-10 Score=103.31 Aligned_cols=120 Identities=16% Similarity=0.117 Sum_probs=93.7
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
++++.++.+.+++.+.+.+++.+.++++|+++||+||| +++.......... ....... .+ ..+.+
T Consensus 31 ~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~~~~~~--~~~~~~~----~~----~~~~r 95 (393)
T PRK11195 31 KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANGIKLLG--CLLMLFG----IH----PLLAY 95 (393)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHHHHHHH--HHHHHHH----HH----HHHHH
Confidence 46788889999999999999999999999999999999 7744433222111 1111110 11 14566
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
++.|++.+...|+. .+++.|++|+++|+++.|+......++..+||.++|++.+.
T Consensus 96 ~l~G~~~a~~~pa~---------~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 96 GLVGIGAAAYSPAK---------YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899888777776 49999999999999999999999999999999999999874
No 57
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.16 E-value=9.5e-10 Score=103.46 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=88.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL-AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+++.+.+.+.+...++.+++|+++||+ ||| +.+... .++......++ ........ ...+.
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG--~il~~lg~lll--~~~~~~~~--~~~l~ 106 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG--ALLMAIGHVVL--GASEIHPS--FLYLS 106 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH--HHHHHHHHHHH--HHhhcchh--HHHHH
Confidence 35799999999999999999999999999999999 999 763332 22211111111 11111111 22223
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCC--chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER--SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.+..++.+...+.. .+++.|.+|++ .|.+++++.+...++|+.++|.+.|++.++. ||+.
T Consensus 107 l~li~iG~G~~~~~~---------~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~ 169 (493)
T PRK15462 107 LAIIVCGYGLFKSNV---------SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAM 169 (493)
T ss_pred HHHHHHhcccccccH---------HHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHH
Confidence 333334444333333 37889999876 6999999999999999999999999998865 6654
No 58
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.16 E-value=9.5e-09 Score=96.68 Aligned_cols=133 Identities=17% Similarity=0.190 Sum_probs=87.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHh-CCCCCchhHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLF-LPDDPSTGFMRGL 81 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (279)
.+....+....+++.+...++.+++.++.++++||+|+| +.+.......+ ......... ... +...+.+.+
T Consensus 258 ~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~i 329 (473)
T PRK10429 258 FTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGASIFPV--LSCGVLLLMGLAA-PHNALLIVI 329 (473)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHH--HHHHHHHHHhccC-chhHHHHHH
Confidence 343344566677777777889999999999999999999 66433322211 111111111 111 122224445
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
..++.|++.+...... +++++|.++ .+..|..+|...++..++.++++.+.|++.+.. ||..
T Consensus 330 ~~~l~g~~~~~~~~~~---------~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~-Gy~~ 398 (473)
T PRK10429 330 AGILLNIGTALFWVLQ---------VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI-GYVP 398 (473)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 5566666666444433 588899866 445666889999999999999999999999865 8864
No 59
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.15 E-value=6.6e-12 Score=114.24 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=105.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+++++...|++.+.+.+..++.+++.|+++||++|+ +++..++.+.....+... ....+|.+.+++
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~-------fs~~Fwq~~l~R 128 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASG-------FSNHFWQVLLCR 128 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999 774444333322211111 125667889999
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+.|+|-....+.. +.+++|.+|..+|+++++++++...+|+.+|-.+++.+.++.+.||+
T Consensus 129 ~~vGiGeAs~~~ia---------~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 129 GFVGIGEASYSPIA---------PSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHhccchhhhcccc---------hhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 99999998777766 69999999999999999999999999999999888888887755777
No 60
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.15 E-value=1.8e-09 Score=100.85 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=83.0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|++..+++++..+..++.+++.+++|+++||++++. +.........+..+ . ...+... ...+. +...+.++
T Consensus 283 ~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r---~~~~~~~~~~l~~~-~-~~~~~~~-~~~~~-~~~~~~~~ 355 (452)
T PRK11273 283 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGN---RGATGVFFMTLVTI-A-TIVYWLN-PAGNP-TVDMACMI 355 (452)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC---cchHHHHHHHHHHH-H-HHHHHHh-cccCh-HHHHHHHH
Confidence 46899999999999999999999999999999995420 02211111111111 1 1111111 11121 12333444
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhh-HHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSI-APPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i-~~~~~g~l~~~~~g~~~ 153 (279)
..|++........ ..+..|.+|++.|++++|+.+...++++.+ +|.+.|.+.++. ||+.
T Consensus 356 ~~g~~~~~~~~~~---------~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~ 415 (452)
T PRK11273 356 VIGFLIYGPVMLI---------GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDG 415 (452)
T ss_pred HHHHHHHhHHHHH---------HHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchH
Confidence 4555432222212 256779999999999999999988888765 799999999976 5553
No 61
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.15 E-value=6.7e-10 Score=102.49 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=85.2
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|++..|.++.+.+.+.+...++.++++++.|+++||++|| +++... ..+...... .....+. ... ....+
T Consensus 257 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~--~~~~~~~~~-~~~~~~~-~~~-~~~~~ 326 (426)
T PRK12307 257 YLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIG--LLMSFLFIF-PLFRIPQ-DNY-LLLGA 326 (426)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHH--HHHHHHHHH-HHHHHcc-ccH-HHHHH
Confidence 3455688999999999999999999999999999999998 663332 222211111 1111111 111 12222
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
..+..+++........ +.++.|.+|++.|+++.|+.+.+..+++.++|.+.|++.++.
T Consensus 327 ~~~~~~~~~~~~~~~~---------~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 327 CLFGLMATNVGVGGLV---------PKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHHHHHHhcccHhHHH---------HHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 2222222211111222 477889999999999999999999999999999999998865
No 62
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.14 E-value=9.2e-10 Score=102.84 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=82.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
|++..+.+++.+...++..++++++|+++||+||| +++.... .+......... ..+......+.+.+.+++.
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----~~l~~~~--~~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~ 130 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGL--ILAAAVMLFMG-FVPWATSSIAVMFVLLFLC 130 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-----hhHHHHH--HHHHHHHHHHH-hhhcccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 7633332 22111111111 1111111233556677888
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
|++.+...+.. ...+.+.+|++.|+++.++.+....+|+.+.+++.
T Consensus 131 gi~~g~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 131 GWFQGMGWPPC---------GRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHhccchHH---------HHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 88877654444 26778899999999999999888888876544443
No 63
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.14 E-value=8e-10 Score=104.42 Aligned_cols=129 Identities=16% Similarity=0.082 Sum_probs=94.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+++++.+.+.+...+..+++|+++|| +||| +++... ..+.......+. ...... ..+.+.
T Consensus 43 ~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g--~~~~~~g~~~~~--~~~~~~--~ll~~~ 111 (489)
T PRK10207 43 KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG--AIVLAIGYFMTG--MSLLKP--DLIFIA 111 (489)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH--HHHHHHHHHHHH--Hhccch--hHHHHH
Confidence 4589999999999999988888888999999999 9999 774333 222221112221 112111 134466
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCC--chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER--SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. .+++.|.+|++ +|++++++.+...++|..++|.++|++.++. ||++
T Consensus 112 ~~l~~ig~g~~~~~~---------~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~ 174 (489)
T PRK10207 112 LGTIAVGNGLFKANP---------ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSV 174 (489)
T ss_pred HHHHHhccccccCCH---------HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHH
Confidence 777888877665544 48899999887 4577899999999999999999999999876 7764
No 64
>PRK11043 putative transporter; Provisional
Probab=99.13 E-value=2.1e-09 Score=98.48 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=95.5
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.++.+.+++.+++.++..++++++|+++||+||| +.+.... .+......... . .++ .+.+.+.
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~--~~~~~~~~~~~--~--~~~-~~~l~~~ 100 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGL--SLFALGSLGML--W--VES-AAQLLVL 100 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHH--HHHHHHHHHHH--H--hcC-HHHHHHH
Confidence 356899999999999999999999999999999999999 7643332 22111111111 1 122 3356677
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. ..++.|.+|++.++++.+.......++..++|.+.+++.++. ||+.
T Consensus 101 ~~l~G~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~ 161 (401)
T PRK11043 101 RFVQAVGVCSAAVIW---------QALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQA 161 (401)
T ss_pred HHHHHhhhHHHHHHH---------HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHH
Confidence 788888766444433 477889999998988889888888899999999999998865 6654
No 65
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.13 E-value=1e-09 Score=107.97 Aligned_cols=114 Identities=17% Similarity=0.116 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISW 92 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 92 (279)
..+...+..++.+++.+++|+++||+||| +++. +++++..+..+++. . .++.. .+++.+++.+++.+.
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~--~~~~lsai~~ll~~-~---~~s~~-~ll~~~~l~g~~~~~ 664 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLA--GSMVLSCISCFFLS-F---GNSES-AMIALLCLFGGLSIA 664 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHH--HHHHHHHHHHHHHH-H---HccHH-HHHHHHHHHHHHHHH
Confidence 34556677899999999999999999999 7633 22322222212111 1 11122 334444556665554
Q ss_pred hhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 93 NPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
..+.. +++++|++|.+.|++++|+.+....+|+.++|.++|.+.+.
T Consensus 665 ~~~~~---------~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 665 AWNAL---------DVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHH---------HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444 58999999999999999999999999999999999988763
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.13 E-value=1.4e-09 Score=100.25 Aligned_cols=125 Identities=16% Similarity=0.189 Sum_probs=90.4
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
+|++..+.+++.+...++.+++.++.+++.||.+++ +.+... ..+... ....+. ..++ .+...+..++
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~--~~~~~~--~~~~~~--~~~~-~~~~~~~~~~ 321 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLS--TLGSFL--AVGLFG--LMPM-WILAVLCLAL 321 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHH--HHHHHH--HHHHHH--ccch-HHHHHHHHHH
Confidence 789999999999999999999999999999986655 442222 111111 111111 1122 2245566677
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.|++.+...+.. .+++++..|++.|++++|+.+...++|..++|.+.|++.+.. |+.
T Consensus 322 ~g~~~~~~~~~~---------~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~ 378 (417)
T PRK10489 322 FGYLSAISSLLQ---------YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPV 378 (417)
T ss_pred HHHHHHHHHHHH---------HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chh
Confidence 777776554433 478899999999999999999999999999999999999975 443
No 67
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.12 E-value=1.2e-09 Score=101.15 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=87.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHH-HhCCCCC------chh
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLL-LFLPDDP------STG 76 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~ 76 (279)
+..|++..+.+++.....++.+++.+++|+++||++|| +.+... ..+......+.. ....... ...
T Consensus 312 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (481)
T TIGR00879 312 ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLIG--AAGMAICLFVLGILGASFVTGSSKSSGNV 384 (481)
T ss_pred HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHH--HHHHHHHHHHHHHHhhcccCCcccchhHH
Confidence 46788888888899999999999999999999999999 663333 222111111111 1111111 211
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
......++..+++.++... . +.++.|.+|++.|+++.++.+...++++.++|.+.+.+.++. ||..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~ 450 (481)
T TIGR00879 385 AIVFILLFIAFFAMGWGPV--P--------WVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGG 450 (481)
T ss_pred HHHHHHHHHHHHHccccCe--e--------hhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cccc
Confidence 1222222222333333222 2 477799999999999999999999999999999999998864 6654
No 68
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.12 E-value=2.1e-09 Score=97.04 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=87.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|.|+.+.+++.+.+.+...+.+++.|+++||+||| +.+... +....... .... . ..++ .+.+++..
T Consensus 26 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~-~~~~~~~~-~~~~-~--~~~~-~~~l~~~~ 94 (375)
T TIGR00899 26 EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR-----KGLILF-CCLLAALA-CLLF-A--WNRN-YFLLLVLG 94 (375)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-----hHHHHH-HHHHHHHH-HHHH-H--hcch-HHHHHHHH
Confidence 57899999999999999999999999999999999998 553222 11111111 1111 1 1122 22444555
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhH--HHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTI--YALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a--~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|.+.+...+.. ..+..|..|++.|+.+ .+......++|..++|.+.+.+.+.. ||+.
T Consensus 95 ~~~g~~~~~~~p~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~ 156 (375)
T TIGR00899 95 VLLSSFASTANPQL---------FALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTV 156 (375)
T ss_pred HHHHhhhhhhHHHH---------HHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHH
Confidence 66665555444444 3677788887777644 57777788899999999999998864 6664
No 69
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.12 E-value=1.3e-09 Score=97.85 Aligned_cols=127 Identities=13% Similarity=-0.003 Sum_probs=89.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|..+.+++.+++.++..+++++.|+++||+||| +.+.... .+......... .. ...+.+.+.+
T Consensus 31 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-----~~~~~~~--~~~~~~~~~~~----~~-~~~~~~~~~~ 98 (377)
T TIGR00890 31 RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-----AVAMLGG--ILYGLGFTFYA----IA-DSLAALYLTY 98 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-----chhHHhH--HHHHHHHHHHH----HH-HHHHHHHHHH
Confidence 46899999999999999999999999999999999999 6643322 22111111111 11 1233666777
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ...+.+.+| ++|+++.++......+|..+++++.+.+.+.. ||+.
T Consensus 99 ~~~g~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~ 157 (377)
T TIGR00890 99 GLASAGVGIAYGIA---------LNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPA 157 (377)
T ss_pred HHHhHHHHHHHHhH---------HHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHH
Confidence 78888887554433 255667776 56999999998888888887777777766543 5553
No 70
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.12 E-value=1.2e-09 Score=100.37 Aligned_cols=133 Identities=12% Similarity=0.053 Sum_probs=93.9
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|++++|+++.+.+++.+.+.++..+++++.|+++||+||| +++........ ........ ........+.+.+
T Consensus 39 ~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k-----~~l~~~~~~~~--~~~~~~~~-~~~~~~~~~~l~~ 110 (402)
T TIGR00897 39 FLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL-----KTMMIGLLLWC--VGHAAFIV-FGLGHANYPLILL 110 (402)
T ss_pred HHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHH--HHHHHHHH-HhccCccHHHHHH
Confidence 3467899999999999999999999999999999999999 77443322221 11111111 1111112335566
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHH-hhHHHHHHHHHHHhhCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILS-SIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~-~i~~~~~g~l~~~~~g~~ 152 (279)
.+++.|++.+...+.. ..++.+.+|+++|+++.|+.+...++|. .++|.+.+++.+.. ||+
T Consensus 111 ~~~i~G~g~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~ 172 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSF---------LVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEM 172 (402)
T ss_pred HHHHHHcchHHHHhHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chH
Confidence 7777788766444433 3677888999999999999999999886 57888888887754 443
No 71
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.11 E-value=1.4e-09 Score=99.73 Aligned_cols=125 Identities=22% Similarity=0.208 Sum_probs=90.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
++..|+++.+.+++.+...++.++++++.|+++||+||| +.+... ....... ...+ .. .++. +...+.
T Consensus 247 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~--~~~~~~~-~~~~-~~--~~~~-~~~~~~ 314 (406)
T PRK11551 247 LVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----RVVLLI--YAGILAS-LAAL-AA--APSF-AGMLLA 314 (406)
T ss_pred HHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHH--HHHHHHH-HHHH-Hh--cCcH-HHHHHH
Confidence 455789999999999999999999999999999999998 663332 1111111 1111 11 1122 234445
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.++.|++.+...+.. ++++.|.+|++.|+++.|+.+....++..++|.+.|.+.++.
T Consensus 315 ~~~~g~~~~~~~~~~---------~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 315 GFAAGLFVVGGQSVL---------YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HHHHHHHHHhHHHHH---------HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 556666655333433 588899999999999999999999999999999999998754
No 72
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.11 E-value=3.4e-09 Score=96.99 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=90.9
Q ss_pred eeccCCChhH-----HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 037387 3 FELSGFSHGS-----TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGF 77 (279)
Q Consensus 3 ~~~~g~s~~~-----~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (279)
.+++|++..+ .+++.++..++..+++++.|+++||+||| +.+... .........+.. . .. ..+
T Consensus 41 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~~~~~~~~--~--~~-~~~ 108 (408)
T PRK09874 41 VEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK-----IMLLRS--ALGMGIVMVLMG--L--AQ-NIW 108 (408)
T ss_pred HHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH-----HHHHHH--HHHHHHHHHHHH--H--Hh-hHH
Confidence 4567777544 48889999999999999999999999999 664332 222111111111 1 11 233
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+.+.+++.|++.+.. +.. ..++.+.+|++.|+++.++.+....++..++|.+.+.+.+.. +|+.
T Consensus 109 ~~~~~~~~~g~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 173 (408)
T PRK09874 109 QFLILRALLGLLGGFV-PNA---------NALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRP 173 (408)
T ss_pred HHHHHHHHHHHhhhhH-HhH---------HHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH
Confidence 5666777888775544 333 367888999999999999999999999999999999998865 5553
No 73
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.10 E-value=8.6e-10 Score=84.73 Aligned_cols=114 Identities=17% Similarity=0.301 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIA 96 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 96 (279)
.+...++..+++++.|++.||+||| +.+.... ........... .. . ..+...+..++.|++.+...+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~--~~~~~~~~~~~--~~--~-~~~~~~~~~~~~g~~~~~~~~~ 71 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK-----PVLLVGL--FIFVLSTAMFA--LS--S-NITVLIIARFLQGFGAAFALVA 71 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh-----HHHHHHH--HHHHHHHHHHH--Hh--c-cHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788899999999999999999 6633322 22111111111 11 1 2235666778888887765554
Q ss_pred hcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 97 ANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 97 ~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
. +.++.|.+|++.|+++.++.+....++..++|.+.+.+.+.. +|+
T Consensus 72 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 117 (141)
T TIGR00880 72 G---------AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWR 117 (141)
T ss_pred H---------HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chH
Confidence 4 488999999999999999999999999999999999998754 443
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.10 E-value=1.4e-09 Score=100.80 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 037387 10 HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLC 89 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 89 (279)
....+.+.++..++.+++.++.|+++||+|+| +++... .++......+... ........+.+++..++.|++
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~--~~~~~v~~~l~~~-~~~~~~~~~~l~l~~~l~g~~ 321 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLS--LVAWALRFGFFAY-GDPEYFGYALLFLSMIVYGCA 321 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH--HHHHHHHHHHHHH-cCcchhhHHHHHHHHHHHHHH
Confidence 36678999999999999999999999999999 763333 2221111111111 111111223455567777877
Q ss_pred hhhhhhhhcccccccCcccchhcccCCCchhhHHHHHH-HHHHHHHhhHHHHHHHHHHHh
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDR-SFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~-~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+...+.. ..++.|.+|++.|+++.|+.+ ....+|..++|.+.|++.++.
T Consensus 322 ~~~~~~~~---------~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~ 372 (418)
T TIGR00889 322 FDFFNISG---------SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHH---------HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 77554544 378899999999999999997 567899999999999999975
No 75
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.10 E-value=2.4e-09 Score=101.74 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=97.0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
+..-|+...+++..+..+..++.++++|.++||++|| ++++..-.... +....+.++.. ......+.+++..+
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr-----rili~~~~~~~-~~~~~L~~l~~-~~~~~~~~Ll~~~f 111 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR-----RILILSQLLRA-LVALLLAVLAF-FGLLSPWLLLILTF 111 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch-----HHHHHHHHHHH-HHHHHHHHHHH-hCcCCHHHHHHHHH
Confidence 3456788899999999999999999999999999999 77443322111 11111111111 22223346777788
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.|.+..+..|+. .+++.|++|+++...+.++.+...++...+||.++|.+....
T Consensus 112 l~g~~~a~~~PA~---------~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~ 166 (524)
T PF05977_consen 112 LLGIGSAFFNPAW---------QAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF 166 (524)
T ss_pred HHHHHHHHHHHHH---------HHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 8899888888877 599999999999999999999999999999999999998765
No 76
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.09 E-value=2.1e-09 Score=96.49 Aligned_cols=131 Identities=12% Similarity=0.154 Sum_probs=92.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|.+..+.+++.+...++..+++++.|+++||++|| +.+... ..+...... ..... .... .......
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~--~~~~~~~~~-~~~~~-~~~~-~~~~~~~ 301 (377)
T TIGR00890 232 GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIV--FGISAVGMA-AMLFI-PMLN-DVLFLAT 301 (377)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHH--HHHHHHHHH-HHHHc-ccch-hHHHHHH
Confidence 356788888999999999999999999999999999998 663322 222111111 11111 1111 1123334
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.++.|++.+...+.. +.+++|.+|++.|+++.|+.+....+|..++|.+.|.+.++. ||+.
T Consensus 302 ~~~~g~~~g~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~ 362 (377)
T TIGR00890 302 VALVFFTWGGTISLF---------PSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEY 362 (377)
T ss_pred HHHHHHHhccchhcc---------HHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhh
Confidence 455666665443333 478899999999999999999999999999999999999875 6554
No 77
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.09 E-value=1.5e-08 Score=93.75 Aligned_cols=124 Identities=14% Similarity=0.197 Sum_probs=86.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHH
Q 037387 9 SHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGL 88 (279)
Q Consensus 9 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 88 (279)
++...+.+.++..++.+++.++.++++||+|+| +.+... ..+.... .+.....+ ...+...+..++.|+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~--~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~g~ 323 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGG--ILLMVLG-YLIFFFAG---SNLPLILVLIILAGF 323 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH--HHHHHHH-HHHHHHcc---hhHHHHHHHHHHHHH
Confidence 456677788888999999999999999999998 663332 2222211 11111211 112244555566677
Q ss_pred HhhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 89 CISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.+...+.. +++++|..| ++.+|.++|+.+++..++.++++.+.|.+.+.. ||..
T Consensus 324 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~-G~~~ 385 (437)
T TIGR00792 324 GQNFVTGLV---------WALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII-GYVA 385 (437)
T ss_pred HHHHHHHHH---------HHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCc
Confidence 766444433 577888765 567899999999999999999999999999875 8864
No 78
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.08 E-value=1.8e-09 Score=102.58 Aligned_cols=120 Identities=19% Similarity=0.158 Sum_probs=92.5
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+..+.....+..+++.+|..+|+++.|.++||+||| +++ ..++.+.+++..... ..+ .++.+++.++
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~--~~~~~~~~i~~~~~a----~a~-~~~~~~~~Rf 179 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVL--LVSLLLFIIFGILTA----FAP-NYWMFLIFRF 179 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH-----HHH--HHHHHHHHHHHHHHH----HhC-cHHHHHHHHH
Confidence 3455677788889999999999999999999999999 773 333333332222111 222 3448899999
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.|++.+...... +.+++|+++++.|+.+..+ ..+...++.++++.++++..
T Consensus 180 l~G~~~~~~~~~~---------~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 180 LSGFFGSGPLTVG---------FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHHhhccchhHHh---------HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999988665544 6999999999999999999 88888888899999988876
No 79
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=4e-09 Score=97.93 Aligned_cols=115 Identities=16% Similarity=0.076 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC----chhHHHHHHHHHHHHH
Q 037387 14 AFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP----STGFMRGLVLVIMGLC 89 (279)
Q Consensus 14 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~g~~ 89 (279)
+.+++...++..+|++++|+++||+||| +.+... ..+......... ..+.-. .....+++.+++.|++
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr-----~~l~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g 137 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRK-----KSMLIS--VCMMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLS 137 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHH--HHHHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhh
Confidence 3344555566669999999999999999 774333 222111111111 111110 1123577889999999
Q ss_pred hhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
.+...+.. .+++.|.+|+++|+++.++.......|..+++.+...+.
T Consensus 138 ~g~~~~~~---------~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 138 VGGEYGTS---------ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred hhhhHhhH---------HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88666655 499999999999999988887777777777766655543
No 80
>PRK10133 L-fucose transporter; Provisional
Probab=99.07 E-value=4.9e-09 Score=97.76 Aligned_cols=125 Identities=17% Similarity=0.074 Sum_probs=93.5
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+.+|+|+.+.+++.+.+.++..+++++.|+++||+||| +++........ ....+.. .....+ .++.+++.
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----~~l~~g~~~~~--~~~~l~~-~~~~a~-~~~~ll~~ 123 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYA--LGAALFW-PAAEIM-NYTLFLVG 123 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH--HHHHHHH-HHHhcC-CHHHHHHH
Confidence 457899999999999999999999999999999999999 77443332222 1111111 011122 23477888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
+++.|++.+...++.+ .++.+..|++.|....++.+.+..+|..++|.+++.+.
T Consensus 124 r~l~G~g~g~~~~~~~---------~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 124 LFIIAAGLGCLETAAN---------PFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhhHH---------HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997777665 77888777777766789999999999999999887765
No 81
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.07 E-value=1.5e-09 Score=101.61 Aligned_cols=128 Identities=13% Similarity=0.111 Sum_probs=90.1
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.+.+.++..++.++.|+++||+||| +.++.. ..+......+.. . ..+........+
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~--~~~~~~~~~~~~--~--~~~~~~l~~~~~ 115 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR-----PVVIAG--GLLASLGMILAS--F--SSNVIELYLTAG 115 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch-----HHHHhh--HHHHHHHHHHHH--H--hhhHHHHHHHHH
Confidence 56899999999999999999999999999999999999 664333 222111111111 1 112211222334
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..++.+.+| +.|+++.++.+....++..++|++.+.+.+.. ||+.
T Consensus 116 ~l~G~~~~~~~~~~---------~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~ 174 (455)
T TIGR00892 116 FITGLGLAFNFQPS---------LTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRG 174 (455)
T ss_pred HHHHhcchhhhhHH---------HHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHH
Confidence 66788777433322 366778786 78999999999999999999999999998865 7765
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.07 E-value=2.8e-09 Score=99.39 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISW 92 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 92 (279)
-+.+.+++.+|+++|+++.|+++||+||| ..+.......+.. .....+. .......++.+++++.|+..+.
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK-----~~l~~~~~l~~~~--~~~~~~s--~~~~~~e~li~GR~i~Gl~~gl 132 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRK-----NALLLSNLLAVLA--ALLMGLS--KSAPSFEMLILGRLIVGLACGL 132 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcch-----HHHHHHHHHHHHH--HHHHHHH--HHhhhHHHHHHHHHHHHHHhHH
Confidence 34556678999999999999999999999 5533332222211 1111111 1223344889999999999886
Q ss_pred hhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHH
Q 037387 93 NPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAP 138 (279)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~ 138 (279)
..... +.++.|+.|++.||....+......+|..++.
T Consensus 133 ~~~~~---------pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 133 STGLV---------PMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred HHHHH---------HHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 65555 59999999999999777776666666655553
No 83
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.07 E-value=2.8e-09 Score=97.18 Aligned_cols=125 Identities=10% Similarity=0.001 Sum_probs=94.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|.|..++|++.+.+.++..+++++.|+++||+||| +.+... ..+......... ..++ .+.+.+
T Consensus 32 ~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k-----~~~~~~--~~~~~~~~~~~~----~~~~-~~~l~~ 99 (381)
T PRK03633 32 WLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN-----RSYYLA--SLIFAAGCAGLG----LMVG-FWSWLA 99 (381)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----HHHHHH--HHHHHHHHHHHH----Hhcc-HHHHHH
Confidence 4567899999999999999999999999999999999999 763332 222221111111 1122 346777
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
.+++.|++.+...+... ..+.+..++++|+++.+..+...++|..++|.+.+.+.+.
T Consensus 100 ~~~l~G~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 100 WRFVAGIGCAMIWVVVE---------SALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88899998876555442 5567788889999999999999999999999999988663
No 84
>PRK15075 citrate-proton symporter; Provisional
Probab=99.06 E-value=6.7e-09 Score=96.50 Aligned_cols=130 Identities=18% Similarity=0.232 Sum_probs=85.6
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|++..+.+++..+..++.+++++++|+++||+||| +.+........ . ............+... ...+..+
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~ 339 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAI-L-TAYPALSWLVAAPSFA-RMLAVEL 339 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHH-H-HHHHHHHHHHcCCchH-HHHHHHH
Confidence 4799999999988889999999999999999999999 66433221111 1 1111111111222211 2233344
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHH-HHhhHHHHHHHHHHHhhCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESI-LSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~-g~~i~~~~~g~l~~~~~g~~ 152 (279)
+.+++.+...+.. +.+..|.+|++.|+++.++.+.+... ++.++|.+.|++.++. |+.
T Consensus 340 ~~~~~~g~~~~~~---------~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~-g~~ 398 (434)
T PRK15075 340 WLSFLYGSYNGAM---------VVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT-GDK 398 (434)
T ss_pred HHHHHHHHHHhhH---------HHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc-CCc
Confidence 4455555433333 47789999999999999997665554 5788999999999975 543
No 85
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.06 E-value=9.8e-09 Score=94.41 Aligned_cols=130 Identities=13% Similarity=0.153 Sum_probs=87.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|++..+.+++.+...+++.+++++.|+++||++|| +...........+ ....+...........+...+
T Consensus 248 ~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~~~~~~~l~~~~-~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 248 FVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM-----NTVRWFGGVGCGI-FTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHH-HHHHHHHHHHccCCcHHHHHH
Confidence 4567899999999999999999999999999999999988 5432111111111 111111111111112224455
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
..++.|++.+...+ . ...+.+.. ++.|+++.|+.+....+++.++|.+.|.+.+..
T Consensus 322 ~~~~~G~~~~~~~~-~---------~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 322 IAIALGIFLAGYVP-L---------AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF 377 (402)
T ss_pred HHHHHHHHHHHHHH-H---------HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56667776664433 2 24556654 468999999999999999999999999999875
No 86
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.06 E-value=6.3e-09 Score=97.46 Aligned_cols=124 Identities=10% Similarity=0.026 Sum_probs=79.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHh-CCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLF-LPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (279)
+..|++.....+.....+++.+++++++|+++||+||| +++..... +.......+... ....... .....
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~--~~~v~~~~l~~~~~~~~~~~--~~~~~ 369 (479)
T PRK10077 299 KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGAL--GMAIGMFSLGTAFYTQAPGI--VALLS 369 (479)
T ss_pred HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHH--HHHHHHHHHHHHHhcCcccH--HHHHH
Confidence 34677777777777778889999999999999999999 66433222 211111111111 1111221 22223
Q ss_pred HHHHHHHhhhh-hhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 83 LVIMGLCISWN-PIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 83 ~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
+++.+++.+.. .+.. +.+++|.+|++.|+++.|+.+.+..++..+++.+.+.+.
T Consensus 370 ~~~~~~~~~~~~~~~~---------~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 370 MLFYVAAFAMSWGPVC---------WVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHhccccchh---------HHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 33333333321 1223 589999999999999999999999999998887776655
No 87
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.06 E-value=4.9e-09 Score=99.02 Aligned_cols=111 Identities=20% Similarity=0.183 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCch-----hHHHHHHHHHHHHHhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPST-----GFMRGLVLVIMGLCIS 91 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~g~~~~ 91 (279)
+++..++..+|+++.|+++||+||| +++... +++......+.. .. .+... ...+++.+++.|++.+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr-----~~l~~~--~~l~~i~~~~~a-~~-~~~~~~g~~a~~~l~~~R~l~G~g~g 133 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQ-----KILAIT--IVIMSISTFCIG-LI-PSYATIGIWAPILLLLCKMAQGFSVG 133 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccH-----HHHHHH--HHHHHHHHHHHH-hc-ccHHHHHHHHHHHHHHHHHHHHhHhH
Confidence 4667789999999999999999999 774333 222221111111 11 11110 0136788999999998
Q ss_pred hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 92 WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
...++. ..+++|.+|++.|+++.++......+|..+++.+...+.
T Consensus 134 ~~~~~~---------~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~ 178 (490)
T PRK10642 134 GEYTGA---------SIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLIS 178 (490)
T ss_pred hhHHHH---------HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655 489999999999999999888777777777776665543
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.04 E-value=7.1e-09 Score=93.43 Aligned_cols=128 Identities=15% Similarity=0.063 Sum_probs=87.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL-----AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTG 76 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (279)
++++.|+|..+.+++.+. .+...+ .+++|+++||+ ||| +.++.......++ ....+. +.+. ....
T Consensus 14 ~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr-----~~~l~~~~~~~~~-~~~~l~-~~~~-~~~l 83 (356)
T TIGR00901 14 WLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRR-----RSWLVLTQVLLLS-LLLILS-FLVP-STDL 83 (356)
T ss_pred HHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCcc-----HHHHHHHHHHHHH-HHHHHH-cCCc-chhH
Confidence 456789999999999655 555554 89999999998 677 5422222222211 111111 2211 1222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.+....++.+++.+...++. .+++.|.+|+++|+++.++......+|..+++.+.+.+..+.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~---------~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIAL---------DAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 344445556666666666655 489999999999999999999999999999999999888765
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.04 E-value=8.2e-10 Score=98.46 Aligned_cols=117 Identities=18% Similarity=0.127 Sum_probs=89.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHH
Q 037387 8 FSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMG 87 (279)
Q Consensus 8 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 87 (279)
.+..-.|++-+.+++...+.++.+|.++||+||| .++.+++.... .. .+++ ..+.+ +..+++.+++.|
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va--~s-~ll~---~~S~~-F~afv~aR~l~G 132 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVA--LS-YLLW---ALSRN-FAAFVLARFLGG 132 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHH--HH-HHHH---HHHHH-HHHHHHHHHhhh
Confidence 3456688999999999999999999999999999 76433322111 11 1111 12222 235556699999
Q ss_pred HHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 88 LCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
...+...++ .++++|+++++.|+.+++.......+|-.+||.++|++..
T Consensus 133 i~kgnl~v~----------rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 133 IFKGNLSVI----------RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hccCchHHH----------HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 998866553 4999999999999999999999999999999999999987
No 90
>PRK03545 putative arabinose transporter; Provisional
Probab=99.04 E-value=7.3e-09 Score=94.70 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=88.7
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|++..+.+++.+...++.++++++.|+++||+++| .+.... ....... .... .. ..+ .+.+.+..+
T Consensus 235 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~--~~~~~~~-~~l~-~~--~~~-~~~~~~~~~ 302 (390)
T PRK03545 235 VAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAI--ALLLVCL-LLLL-PA--ANS-EWHLSVLSI 302 (390)
T ss_pred hcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHH--HHHHHHH-HHHH-HH--hch-HHHHHHHHH
Confidence 4789999999999999999999999999999999887 542222 2111111 1111 11 112 224555666
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.....+.. ...+.+..| +.|+++.|+.+....+|..+||.+.|.+.++. |++.
T Consensus 303 l~g~~~~~~~~~~---------~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~ 360 (390)
T PRK03545 303 FWGIAIMCIGLAM---------QVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSS 360 (390)
T ss_pred HHHHHHhcchHHH---------HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhH
Confidence 7777766444444 366777766 57899999999999999999999999999975 5553
No 91
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.04 E-value=1.6e-08 Score=94.40 Aligned_cols=124 Identities=14% Similarity=0.119 Sum_probs=87.8
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
++|+|..+.+++.+++.+++.++.++.|++.||+|.| +++...... .+++.. ...+..+...+.++.+++.++
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ll-~~i~~~-~~~~a~~~~~~s~~~lli~r~ 136 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFSTAI-LIIPCV-WLGIAVQNPNTPFGIFIVIAL 136 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHH-HHHHHH-HHHHHHcccCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999 763333222 222222 222111111223447788888
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
+.|++.+ ..+.. ...+++.+|+++||++.|+.....++|..+++.+...+.
T Consensus 137 l~Gigg~-~f~~~---------~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 137 LCGFAGA-NFASS---------MGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHH-hHHHH---------HHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8898743 33333 378899999999999999998777777776666665433
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.03 E-value=9e-09 Score=97.57 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=88.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+++++.+.+........+++|+++|| +||| +.+.... .+......+.. .... . .+.+.+.
T Consensus 50 ~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~~~~g~--~~~~ig~~l~~--~~~~-~-~~~l~~~ 118 (500)
T PRK09584 50 KQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RVIMLGA--IVLAIGYALVA--WSGH-D-AGIVYMG 118 (500)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HHHHHHH--HHHHHHHHHHH--Hhcc-c-HHHHHHH
Confidence 5689999998888887776666667889999999 5999 7643332 22111111111 1111 1 2244556
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCc--hhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERS--RTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.|++.+...+.. .+++.+.+|++. |..++++.+...++|..++|.+.|++.++. ||+.
T Consensus 119 ~~l~gig~g~~~~~~---------~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~ 181 (500)
T PRK09584 119 MATIAVGNGLFKANP---------SSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSV 181 (500)
T ss_pred HHHHHHhhhcccCCH---------HHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHH
Confidence 677788877555544 378899988653 455788889999999999999999999865 6664
No 93
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.03 E-value=6.3e-09 Score=95.62 Aligned_cols=133 Identities=13% Similarity=0.111 Sum_probs=91.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL-----AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTG 76 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (279)
|+++.|+|.++.|++..+... .+..+++|+++||+ ||| ++++.. +..........+. ..+. ....
T Consensus 25 ~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r----r~~l~~--~~~~~~l~~~~l~-~~~~-~~~~ 94 (402)
T PRK11902 25 WMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR----RGWLLL--TQVGLAASIAAMA-FCPP-HAAL 94 (402)
T ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc----hhHHHH--HHHHHHHHHHHHH-hcCc-cchH
Confidence 667889999999999666554 58889999999999 776 234222 2222111112211 2212 2223
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.+.+..++.+++.+...++. .+++.|.+|+++|+++.++......++..+++.+.+.+.+...||+.
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~---------~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~ 162 (402)
T PRK11902 95 WPLAGLAVLVAFLSASQDIVF---------DAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN 162 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH
Confidence 345555555666666666666 49999999999999999999988899999999999888875446664
No 94
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.03 E-value=7.2e-09 Score=96.33 Aligned_cols=132 Identities=15% Similarity=0.170 Sum_probs=85.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHH-HHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILA-QISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+.+...+.+.+++.++.+++|+++||+.+|.+ +..... ..+..+. .......+.. ... ...+.
T Consensus 272 ~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r--~~~~~~~~~~~~~~----~~~~~~~~~~-~~~-~~~~~ 343 (434)
T PRK11663 272 ETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNR--GPMNLIFAAGILLS----VGSLWLMPFA-SYV-MQAAC 343 (434)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc--cHHHHHHHHHHHHH----HHHHHHcccc-cHH-HHHHH
Confidence 4579999999999999999999999999999999943200 122111 1111111 1111112221 221 22233
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+..|++........ ..+..|..|++.|+++.|+.+++.++|+.++|.+.|++.++. ||..
T Consensus 344 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~ 404 (434)
T PRK11663 344 FFTIGFFVFGPQMLI---------GMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTG 404 (434)
T ss_pred HHHHHHHHhhHHHHH---------HHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHH
Confidence 344444322111111 356689999999999999999999999999999999999975 5553
No 95
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.02 E-value=4.4e-09 Score=95.67 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=89.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|++..+.+++.+...++.+++.++.|+++||+||| +.+... ..++........ .. ... .+.+.+..+
T Consensus 268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~--~~~~~~~~~~~~-~~--~~~-~~~~~~~~~ 336 (405)
T TIGR00891 268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR-----KAYVCS--LLAGQLLIIPVF-AI--GAN-VAVLGLGLF 336 (405)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----hhhHHH--HHHHHHHHHHHH-Hh--CCc-hHHHHHHHH
Confidence 5789999999999999999999999999999999999 663332 222111111111 11 112 223444445
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.+++.+...+.. +.+++|.+|++.|++++|+.+.+.++++.++|.+.|.+.++.
T Consensus 337 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 391 (405)
T TIGR00891 337 FQQMLVQGIWGIL---------PKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRL 391 (405)
T ss_pred HHHHHHccchhhH---------HHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555544333333 478899999999999999999999999999999999999976
No 96
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.02 E-value=7.2e-09 Score=93.28 Aligned_cols=129 Identities=16% Similarity=0.202 Sum_probs=86.4
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcch--HHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGR--IILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+.+|.+..+.+++.+...++.+++.+++|+++||++|| + +........++..+............. .+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 317 (399)
T TIGR00893 244 QERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRR-----GKSLVFARKTAIIAGLVLSLLMFATNYVNI-PYAALA 317 (399)
T ss_pred HHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHHHhccchh-HHHHHH
Confidence 35788999999999999999999999999999999998 4 111111111111111111111111112 212222
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
..++.+++.+ ..+.. +.+++|.+|++.|+++.|+.+.+.++++.++|.+.|.+.+..
T Consensus 318 ~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 318 LVALGFFGLG-AGAIG---------WALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHhchh-hhhHH---------HHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 2333333333 23333 589999999999999999999999999999999999998865
No 97
>PRK10504 putative transporter; Provisional
Probab=99.02 E-value=1.8e-08 Score=94.41 Aligned_cols=129 Identities=15% Similarity=0.118 Sum_probs=91.8
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|.++.+.+++.....++..++.++.|++.||+||| +++... ..+.... ...+...+...+ .+...+..+
T Consensus 291 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~--~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 361 (471)
T PRK10504 291 GLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVAT--TLGLALV-SLLFMLVALLGW-YYLLPFVLF 361 (471)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHH--HHHHHHH-HHHHHhcccccc-HHHHHHHHH
Confidence 4799999999999989999999999999999999998 663322 2211111 111212222222 223334455
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
+.|++.+...+.. ..++.+.+|++.+++++|+.++...+|.++++.+.|.+.+.. |+.
T Consensus 362 ~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~-g~~ 419 (471)
T PRK10504 362 LQGMVNSTRFSSM---------NTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF-GQQ 419 (471)
T ss_pred HHHHHHHHHHHHH---------HHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh-hhh
Confidence 6666666444444 378888999999999999999999999999999999998865 663
No 98
>PRK11462 putative transporter; Provisional
Probab=99.01 E-value=4.6e-08 Score=91.79 Aligned_cols=124 Identities=14% Similarity=0.137 Sum_probs=78.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 037387 10 HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLC 89 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 89 (279)
+...+.+++...++.+++.+++++++||+++| ++......... +... .+...+.... . ...+..++.|++
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~~~~~~--~~~~-~~~~~~~~~~-~-~~~~~~~l~g~~ 331 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWTNALLA--VISL-AMFFVPMQAS-I-TMFVFIFVIGVL 331 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHH--HHHH-HHHHhchhHH-H-HHHHHHHHHHHH
Confidence 34455677788889999999999999999998 65332221111 1111 1222222211 1 233344555666
Q ss_pred hhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+...+.. +++++|..+ .+..|..++..++...++.++++.+.|.+.+.. ||..
T Consensus 332 ~~~~~~l~---------~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~-Gy~~ 392 (460)
T PRK11462 332 HQLVTPIQ---------WVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG-GYDA 392 (460)
T ss_pred HHHHHHHH---------HHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 55433332 577788776 445566678888999999999999999999865 8864
No 99
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.01 E-value=4e-09 Score=108.96 Aligned_cols=119 Identities=19% Similarity=0.193 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 90 (279)
...+++.+++.++..++++++|+++||+||| ++++....+.+...+...+. .. . ...+.+++.+++.|++.
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk-----~~l~~~~~~~~~~~~~~~~~-~~--~-~~~~~l~~~r~l~G~~~ 117 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKN-----RVIRIVKLFEVGLTLLIVLA-YY--L-GWFWLAFAVTFLLGAQS 117 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHH-----HHHHHHHHHHHHHHHHHHHH-HH--H-ccHHHHHHHHHHHHHHH
Confidence 4468888999999999999999999999999 77443322211111111111 11 1 12447788888999998
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
+...++. .+++.|++|++.|++++|+......+|..+++.+++++.+.
T Consensus 118 ~~~~~~~---------~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 118 AIYSPAK---------YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HhhchHH---------HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8776666 48999999999999999999999999999999999999875
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=5.8e-08 Score=90.50 Aligned_cols=124 Identities=17% Similarity=0.235 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 037387 10 HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLC 89 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 89 (279)
+...+.+.....++.+++.+++++++||+|+| +.+... ..+...... .....+. ...+.+.+..++.|++
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~--~~~~~~~~~-~~~~~~~--~~~~~~~~~~~i~g~~ 332 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWT--IVAFVILSA-LIFFIPP--SNVWLIFALNILFNFI 332 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHH--HHHHHHHHH-HHHHhCc--chHHHHHHHHHHHHHH
Confidence 33445556666788889999999999999998 663332 222111111 1112221 2222455566677888
Q ss_pred hhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+...+.. +++++|+++ .+..|..+|+.+++..+|.++++.+.|.+.+.. ||..
T Consensus 333 ~~~~~~~~---------~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~-Gy~~ 393 (444)
T PRK09669 333 QNLTTPLQ---------WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV-DYVG 393 (444)
T ss_pred HHHHHHHH---------HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 77655555 688988886 345567789999999999999999999999865 8864
No 101
>PRK09952 shikimate transporter; Provisional
Probab=99.00 E-value=1.3e-08 Score=94.72 Aligned_cols=110 Identities=17% Similarity=0.134 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCch-----hHHHHHHHHHHHHHhhhh
Q 037387 19 LFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPST-----GFMRGLVLVIMGLCISWN 93 (279)
Q Consensus 19 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~g~~~~~~ 93 (279)
+..++..+|+++.|+++||+||| +.+.. +..+......+.. ...+... .+.+++.+++.|++.+..
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr-----~~l~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~ 142 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRK-----RMLML--TVWMMGIATALIG--LLPSFSTIGWWAPVLLVTLRAIQGFAVGGE 142 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccH-----HHHHH--HHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 44566788999999999999999 77433 2222121111111 1111110 114667889999999866
Q ss_pred hhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 94 PIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
.+.. ..++.|.+|++.|++..+.......+|..+++.+.+++..
T Consensus 143 ~~~~---------~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~ 186 (438)
T PRK09952 143 WGGA---------ALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISM 186 (438)
T ss_pred HHHH---------HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555 4899999999999998888888778887777777766653
No 102
>PRK09952 shikimate transporter; Provisional
Probab=98.99 E-value=2.5e-08 Score=92.84 Aligned_cols=127 Identities=14% Similarity=0.136 Sum_probs=82.5
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|++......+..+.++...++.++.|+++||+||| +.+... .++............... +..+.+.+..+
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 351 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITG--ALIGTLSAFPFFMALEAQ-SIFWIVFFSIM 351 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHH--HHHHHHHHHHHHHHHHcC-ChHHHHHHHHH
Confidence 4678887666666667788888999999999999999 664332 222111111111111111 12223333445
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHH-HHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFES-ILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~-~g~~i~~~~~g~l~~~~ 148 (279)
+.+++.+...+.. ++++.|.+|++.|+++.++.+.... +++.++|.+.+++.+..
T Consensus 352 l~~~~~~~~~~~~---------~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~ 407 (438)
T PRK09952 352 LANIAHDMVVCVQ---------QPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF 407 (438)
T ss_pred HHHHHHHHHHHHH---------HHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566655443433 5889999999999999999776644 78899999999998854
No 103
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.98 E-value=1.3e-08 Score=93.16 Aligned_cols=119 Identities=25% Similarity=0.266 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhh
Q 037387 12 STAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCIS 91 (279)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 91 (279)
..++..+.+.++.+++.++.|++.||+++| +.+.... .+......... .. .+. +...+..++.|++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~~~--~~~~~~~~~~~--~~--~~~-~~~~~~~~l~G~~~~ 317 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGL-----RVAIVSL--LVEILGLLLLW--LA--PSP-WMALIGAALTGFGFS 317 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHH--HHHHHHHHHHH--Hh--ccH-HHHHHHHHHHHHhHH
Confidence 446667778889999999999999999988 6633222 21111111111 11 122 244556677888877
Q ss_pred hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 92 WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
...+.. ...+.+.+|++.|+++.++.+....++..++|.+.|.+.++. ||+
T Consensus 318 ~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~ 368 (399)
T PRK05122 318 LVFPAL---------GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYP 368 (399)
T ss_pred HHHHHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHH
Confidence 554444 266778899999999999999999999999999999998865 444
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.97 E-value=9.1e-09 Score=106.53 Aligned_cols=124 Identities=13% Similarity=0.036 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 90 (279)
...++..+++.+.+++.++++|+++||+||| +++.......+......+.... . ...+.+++++++.|++.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk-----~~~~~~~~~~~~~~~~~~~~~~--~--~s~~~l~~~~~l~gi~~ 122 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKA-----KLAKILKFAEIGIAALAIYGFH--L--NSVPLLFAALFLMGIHS 122 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHH-----HHHHHHHHHHHHHHHHHHHHHH--H--hhHHHHHHHHHHHHHHH
Confidence 4567788889999999999999999999999 7642221111111111111111 1 23447888899999998
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++..++. .+++.+++|++.|++++|+.+...++|..+||.++|++.... ||+.
T Consensus 123 a~~~p~~---------~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~ 175 (1140)
T PRK06814 123 ALFGPIK---------YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVI 175 (1140)
T ss_pred HhhchHH---------HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHH
Confidence 8777766 499999999999999999999999999999999999998864 5543
No 105
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.96 E-value=4.2e-08 Score=89.91 Aligned_cols=126 Identities=13% Similarity=0.111 Sum_probs=85.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.+...++.+++.+++|+++||++|| +.+.. +....... .... .... + .+...+.+
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~--~~~~~~~~-~~~~-~~~~--~-~~~~l~~~ 312 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRV--AAVAGVCF-YAGM-LMAH--S-PAILLGLQ 312 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHH--HHHHHHHH-HHHH-HHHh--h-HHHHHHHH
Confidence 45799999999988888888899999999999999999 65332 22221111 1111 1111 1 12334444
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
++.+++.+...... +.+.+|..|++ ++++.++.+...++|..++|.+.|.+.++. ||+
T Consensus 313 ~l~~~~~g~~~~~~---------~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~ 370 (393)
T PRK15011 313 LLNAIYIGILGGIG---------MLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYH 370 (393)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhH
Confidence 55555544332322 36678888864 888999999989999999999999999865 544
No 106
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=3.8e-08 Score=88.66 Aligned_cols=123 Identities=13% Similarity=0.084 Sum_probs=91.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+++|+|..+.+++.+++.++..+++++.|+++||+||| +.+... ....... .+.. . . ++ .+.+.+.
T Consensus 27 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~--~~~~~~~-~~~~--~-~-~~-~~~l~~~ 93 (355)
T TIGR00896 27 RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-----RSVAAG--LLLIAAG-ILIR--S-A-PG-TALLFAG 93 (355)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-----HHHHHH--HHHHHHH-HHHH--H-h-cc-HHHHHHH
Confidence 457899999999999999999999999999999999999 764332 2221111 1111 1 1 22 2256677
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+++.|++.+...+.. +.++.+..| ++|+++.++.+...++|..+++.+.+.+.+..
T Consensus 94 ~~~~g~g~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 94 TALIGVGIAIINVLL---------PSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHHHHhccc---------hHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888877554444 366777776 57999999999999999999999999887654
No 107
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.96 E-value=1.1e-08 Score=92.38 Aligned_cols=128 Identities=17% Similarity=0.197 Sum_probs=87.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|.+..+.+.+.....++..++.++.|+++||+||| +.+........ +............. + .+......
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~ 319 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-----PVLIIFTVLAA-LLAVPLLMALLDSG-S-FTLFFFLV 319 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHHHH-HHHHHHHHHHhcCC-c-hHHHHHHH
Confidence 45789999999999999999999999999999999998 65332211111 11101111111111 2 22444555
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHH-HHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRS-FESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~-~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.|++.+...+.. +.++.|.+|++.|+++.++.+. ...++..++|.+.|++.++.
T Consensus 320 ~~~g~~~~~~~~~~---------~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 320 LGLALIGGMYTGPM---------GSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHHHHHHHHHhhhH---------HHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 66676665444444 5889999999999999998544 45577789999999999976
No 108
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.96 E-value=8.8e-09 Score=95.82 Aligned_cols=132 Identities=18% Similarity=0.305 Sum_probs=83.0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|+++.+.+++..+..++++++++++|+++||++++ ++.......... . +............+.. .....++
T Consensus 281 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~----~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~ 353 (438)
T TIGR00712 281 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG----NRGATGVFFMTL-V-TIAVIVYWMNPAGNPL-VDMICMI 353 (438)
T ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC----cccHHHHHHHHH-H-HHHHHHHHhcCCCchH-HHHHHHH
Confidence 4689999999999999999999999999999999754 122211111111 1 1111111111111211 2333344
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHH-hhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILS-SIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~-~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++........ .....|.+|++.|+++.|+.+...++++ .++|.+.|.+.++. ||..
T Consensus 354 ~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~ 413 (438)
T TIGR00712 354 VIGFLIYGPVMLI---------GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDG 413 (438)
T ss_pred HHHHHHccHHHHH---------HHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchH
Confidence 4554432221111 2456789999999999999998888875 68999999999975 5543
No 109
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.96 E-value=1.6e-08 Score=93.38 Aligned_cols=125 Identities=9% Similarity=0.107 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
+.+..+.+++.++..++..++.+++|+++||+|+| +.+...... . .. ......... +. +.+.+..++.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l-~-~~--~~~l~~~~~--~~-~~~~~~~~l~ 325 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTI-M-AV--RIIGSGFAT--GP-LEVSILKLLH 325 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHH-H-HH--HHHHHHhcc--cH-HHHHHHHHHH
Confidence 56667889999999999999999999999999999 663322211 1 11 111111112 22 2445556666
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHH-HHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYAL-DRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~-~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
|++.+...+.. ..++.+.+|++.++++.+. .++...+|..++|.+.|++.+.. ||+.
T Consensus 326 g~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~ 383 (420)
T PRK09528 326 AFEVPFLLVGV---------FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQG 383 (420)
T ss_pred HHHHHHHHHHH---------HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchH
Confidence 76665443333 3788899999999887765 56678899999999999999975 6664
No 110
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.95 E-value=9.4e-09 Score=96.84 Aligned_cols=122 Identities=17% Similarity=0.147 Sum_probs=71.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+++.+.++..++.+++.+++|+++||++||...+.+.........+... .... .+...+. +...+.+
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i--~~~~--~~~~~~~-~~~~~~~ 355 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV--FCIW--LGRANSL-GAAIVVM 355 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH--HHHH--hcccchH-HHHHHHH
Confidence 457999999999999999999999999999999999873322232222222222111 1111 1122221 2333444
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHH
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~ 140 (279)
++.+++.+...... ++++.++.| +.++++.|+.+...++|+.++|.+
T Consensus 356 ~l~~~~~~~~~~~~---------~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 356 ILFSIFVQAACGAT---------FGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred HHHHHHHHHhhhhh---------cccCcccCh-hhchhhhhhhhccccHHHHHHHHH
Confidence 55555544332222 466666654 678888888766555555554444
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=98.95 E-value=1.1e-07 Score=88.74 Aligned_cols=129 Identities=12% Similarity=0.000 Sum_probs=86.1
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|.++...++......++.+++.++.+++.||+|+| +.+... ..+.... .+.+...+. ...+...+.++
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~~g--~~~~~i~-~~~~~~~~~--~~~~~~~~~~~ 327 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFLIG--ALLGTCG-YLLFFWVSV--WSLPVALVALA 327 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH--HHHHHHH-HHHHHHcCc--hhHHHHHHHHH
Confidence 4677666655555555677888999999999999998 663333 2221111 111112111 22334455566
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCC-------chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPER-------SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.+...+.. +++.+|..|.+ .+|..+|+.++...+|.++++.+.|.+.+.. ||..
T Consensus 328 l~g~G~~~~~~~~---------~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~-G~~~ 393 (448)
T PRK09848 328 IASIGQGVTMTVM---------WALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS-GYIA 393 (448)
T ss_pred HHHHHHHHHHHHH---------HHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 7777777554444 57888887653 4688899999999999999999999998864 8864
No 112
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.94 E-value=1.1e-08 Score=93.87 Aligned_cols=124 Identities=16% Similarity=0.156 Sum_probs=84.8
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++.|++..+++.+.+.+.++.++++++.|++.||++|| +.+.... .+.... ...+...+.. . . .. .
T Consensus 232 l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~--~l~~~~-~~~~~~~~~~-~-~-~~--~ 298 (393)
T PRK09705 232 YIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLAL--VLQLVG-FCGFIWLPLQ-L-P-VL--W 298 (393)
T ss_pred HHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHH--HHHHHH-HHHHHHccch-H-H-HH--H
Confidence 345799999999999999999999999999999999998 6633332 221111 1111112221 1 1 12 2
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhccc-CCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIV-PERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.++.|++.+...+.. .....+.. |++.+++++++.+.+..+++.++|.+.|++.++.
T Consensus 299 ~~l~g~g~g~~~~~~---------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~ 356 (393)
T PRK09705 299 AMVCGLGLGGAFPLC---------LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS 356 (393)
T ss_pred HHHHHHhccchHHHH---------HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 234466655433333 24455655 4678999999999999999999999999999976
No 113
>PRK03699 putative transporter; Provisional
Probab=98.93 E-value=3.9e-08 Score=90.09 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=86.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+|..+.+.+.+.+.++..++.+++|+++||+++| +++.... .+.... ...+ ....+.. ...+..
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~--~~~~~~-~~~~-~~~~~~~---~~~~~~ 301 (394)
T PRK03699 234 KKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLA--GLALVL-MYLF-VNTDDPS---HLLYAI 301 (394)
T ss_pred HHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHH--HHHHHH-HHHH-HHcCCch---HHHHHH
Confidence 45799999999999999999999999999999999998 6633322 221111 1111 1112211 344455
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..+..+..|. .+++..+.......+|..++|.+.|++.+.. |++.
T Consensus 302 ~~~G~~~~~~~~~~---------~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~ 360 (394)
T PRK03699 302 LGLGFFSSAIYTTI---------ITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQA 360 (394)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-Cchh
Confidence 66777666444433 2556666654 4566788888888999999999999999975 6554
No 114
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.93 E-value=7e-09 Score=98.23 Aligned_cols=111 Identities=15% Similarity=0.095 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHH-Hhhhhhhhh
Q 037387 19 LFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGL-CISWNPIAA 97 (279)
Q Consensus 19 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~ 97 (279)
+..++.+++.++.++++||+||| ++++..... .++.+ .++........... ......+...+ +.+..+.
T Consensus 343 ~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~-~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 412 (502)
T TIGR00887 343 IALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFI-LTVLF-FVLGFAYNHLSTHG-FLAIYVLAQFFANFGPNAT-- 412 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHH-HHHHH-HHHHHHHHhcchhH-HHHHHHHHHHHHhcCCCch--
Confidence 34456677889999999999999 664332211 11111 11111111111111 11111111111 2222222
Q ss_pred cccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 98 NKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 98 ~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
. +.+.+|++|.+.|+++.|+.+.+..+++.++|.+.+.+.+.
T Consensus 413 ~--------~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 413 T--------FIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred h--------hhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 2 57889999999999999999999999999999999999874
No 115
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.92 E-value=3e-08 Score=87.86 Aligned_cols=126 Identities=29% Similarity=0.462 Sum_probs=95.5
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcch-HHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGR-IILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+.+..+.+++.+...++..++.++.+++.||++|| + .+... ..+......... . ..+ .+...+..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~i~~~~~~-~---~~~-~~~~~~~~~ 273 (352)
T cd06174 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIG--LLLAALGLLLLA-L---APS-LALLLVALL 273 (352)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHH--HHHHHHHHHHHH-H---hcc-HHHHHHHHH
Confidence 488999999999999999999999999999999999 6 53222 222111111111 1 111 235666777
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.+...+.. ..++.|..|++.|+++.|+.+...+++..++|.+.|.+.+.. +|+.
T Consensus 274 ~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~ 332 (352)
T cd06174 274 LLGFGLGFAFPAL---------LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGG 332 (352)
T ss_pred HHHHHHhccchhH---------HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-Ccch
Confidence 8888877655555 589999999999999999999999999999999999998754 6654
No 116
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.92 E-value=2.7e-09 Score=103.77 Aligned_cols=136 Identities=9% Similarity=0.032 Sum_probs=99.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHH-HHHHHHHHHHHHHHhCC------------
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQI-SFGSGIPIAAVLLLFLP------------ 70 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------ 70 (279)
+.++++..+.|++.+.+.+++.++.++.++++||.+|| +++.... .+.++..+..+..+...
T Consensus 61 k~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 61 RRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred hhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 46899999999999999999999999999999999998 5532221 11111111111100000
Q ss_pred ------------C-----------------C--CchhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCch
Q 037387 71 ------------D-----------------D--PSTGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSR 119 (279)
Q Consensus 71 ------------~-----------------~--~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 119 (279)
. . ...+.++++.+++.|++.+...+.. .+++.|.+|++.|
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~---------~~~i~d~~~~~~~ 206 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG---------ISYIDDFAKSKNS 206 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC---------chhhhccCCcccc
Confidence 0 0 0123356788999999988666655 5999999999999
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 120 TTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 120 ~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+...++.+....+|..+|+.++|++.+.+.+|+.
T Consensus 207 ~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~ 240 (633)
T TIGR00805 207 PLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGS 240 (633)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccccc
Confidence 9999999999999999999999999876545543
No 117
>PRK12382 putative transporter; Provisional
Probab=98.91 E-value=3.2e-08 Score=90.39 Aligned_cols=126 Identities=24% Similarity=0.319 Sum_probs=87.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
++.|++. .++......++.++++++.|++.||+|+| +.+..... +.... .... ... ++. +...+..
T Consensus 244 ~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~--~~~~~-~~~~-~~~--~~~-~~~~~~~ 309 (392)
T PRK12382 244 ASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLL--VETVG-LLLL-WLA--PTA-WVALAGA 309 (392)
T ss_pred HhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHH--HHHHH-HHHH-HHc--ccH-HHHHHHH
Confidence 4445543 45666677888899999999999999998 55333222 11111 1111 111 122 2445566
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ...+.+.+|++.|+++.|+.+....++..++|.+.|++.++. ||+.
T Consensus 310 ~l~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~ 369 (392)
T PRK12382 310 ALTGAGCSLIFPAL---------GVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPS 369 (392)
T ss_pred HHHHHHHHhHHHHH---------HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchH
Confidence 77787777554544 367788899999999999999999999999999999999975 6654
No 118
>PRK15075 citrate-proton symporter; Provisional
Probab=98.91 E-value=2.4e-08 Score=92.81 Aligned_cols=124 Identities=15% Similarity=0.067 Sum_probs=80.7
Q ss_pred eccCCChhHHHHHH-HH-----HHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCch--
Q 037387 4 ELSGFSHGSTAFLL-TL-----FTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPST-- 75 (279)
Q Consensus 4 ~~~g~s~~~~~~~~-~~-----~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 75 (279)
++++.++.+.+.+. +. ..++..+++++.|+++||+||| +.+.... .+......+.. ...+...
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr-----~~l~~~~--~~~~~~~~l~~--~~~~~~~~~ 113 (434)
T PRK15075 43 KTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR-----KGLIVTL--SIMASGTLLIA--FVPGYATIG 113 (434)
T ss_pred HHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH-----HHHHHHH--HHHHHHHHHHH--hCCcHHHHH
Confidence 45677666544332 22 2233357899999999999999 7743332 22111111111 1111110
Q ss_pred ---hHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 76 ---GFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 76 ---~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
...+++.+++.|++.+...++. ..++.|.+|++.|+++.++.....+++..+++.+++.+.
T Consensus 114 ~~~~~~l~~~R~l~G~~~g~~~~~~---------~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 114 LAAPLLVLLGRLLQGFSAGVELGGV---------SVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HHHHHHHHHHHHHhhccccccHHHH---------HHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1135677889999888655545 488999999999999999999888888888888777764
No 119
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.91 E-value=3.9e-08 Score=88.96 Aligned_cols=124 Identities=19% Similarity=0.228 Sum_probs=94.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHH-HHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFG-SGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++++|+.|.+++.++..+.+.+..++-|.+.||+|.| ++ ..++.+ ..+|+..+.+.. ..++ .+.+++.
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR-----~~--~~~s~~l~~IP~~~~~~a~--~~~~-~~~ll~~ 111 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR-----KW--TILSMLLLLIPCLGLAFAV--TYPS-TWQLLVI 111 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch-----HH--HHHHHHHHHHHHHHHHHHc--cCCc-hHHHHHH
Confidence 57899999999999999999999999999999999999 66 333333 344444333322 2222 2467777
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
..+.|++.+..... -.+++..+|++++|.+.|+.. ..|+|.++...+..++....
T Consensus 112 gll~G~~GasFav~----------m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 112 GLLLGLAGASFAVG----------MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHhcccceehcc----------cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 77778775533232 288999999999999999999 99999999888888887765
No 120
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.91 E-value=2.5e-08 Score=94.78 Aligned_cols=113 Identities=18% Similarity=0.274 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 90 (279)
.+.+++.+...++..+++++.|+++|++||| +.+.......... ..+.. ... ...++.+++++.|++.
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG--~ii~~--~a~---~~~~l~~GR~l~G~g~ 156 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIG--AIIIA--LAP---SWYQLIVGRILTGLGV 156 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHH--HHHHH--Hhh---hHHHHHHHHHHhccch
Confidence 3458999999999999999999999999999 6643333222211 11111 111 3348899999999999
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
|...... +.|++|+.|++.||...++.+....+|..++ .+.+...
T Consensus 157 G~~~~~~---------piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 157 GGASVLA---------PVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred hhhhhcc---------hhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 9666555 6999999999999998888888888776666 4444443
No 121
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.90 E-value=2e-08 Score=90.21 Aligned_cols=133 Identities=23% Similarity=0.389 Sum_probs=89.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+++.+...++.+++.++.|++.||..+| ++.......... ... ...........+ .....+..
T Consensus 245 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~----~~~~~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~ 317 (379)
T TIGR00881 245 QEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG----RRGPLAVFFMAL-IIV-SLLVYWLNPAAN-PLMDLICL 317 (379)
T ss_pred HHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC----cchHHHHHHHHH-HHH-HHHHHhcCcchh-HHHHHHHH
Confidence 45789999999999999999999999999999987543 132111111111 111 111111111112 22344445
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.....+.. +.+..|.+|++.|+++.|+.+....+++.++|.+.|.+.++. ||+.
T Consensus 318 ~~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~ 377 (379)
T TIGR00881 318 FALGFLVYGPQMLI---------GVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAG 377 (379)
T ss_pred HHHHHHHhhhhHHH---------HHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-cccc
Confidence 55565443222222 477899999999999999999999999999999999999975 7764
No 122
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.90 E-value=5.7e-08 Score=88.60 Aligned_cols=127 Identities=18% Similarity=0.149 Sum_probs=87.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.++.|.+..+.+++.+...++.++++++.|++.||+++| +++... ..+.... ..... . .. ....
T Consensus 226 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~--~~~~~~~-~~~~~--~--~~---~~~~ 290 (381)
T PRK03633 226 YLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQ--VFVVILG-SIAML--S--QA---AMAP 290 (381)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHH--HHHHHHH-HHHHh--h--hH---HHHH
Confidence 4556799999999999999999999999999999999998 663322 2221111 11111 1 11 2223
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++.|++.....+.. ..++.|..|++.++.+.+..+...++|..++|.+.|++.++. |+.+
T Consensus 291 ~~~l~g~~~~~~~p~~---------~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~ 352 (381)
T PRK03633 291 ALFILGAAGFTLYPVA---------MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNL 352 (381)
T ss_pred HHHHHHHHHHhHHHHH---------HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccH
Confidence 3444555444333434 377788888888777888888888999999999999999975 5543
No 123
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.90 E-value=9.7e-08 Score=89.83 Aligned_cols=132 Identities=17% Similarity=0.300 Sum_probs=96.9
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhC-CCCCchhHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFL-PDDPSTGFMRGLVL 83 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 83 (279)
.+|++..+...+..+..+.+++|++++|++.||+|.| .++++...+.....+++...+.+.. .......+.+.+.-
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k---~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a 387 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK---TKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA 387 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH
Confidence 6899999999999999999999999999999999987 1123222222222222222221111 11112223555666
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.|+++|...... +++.+++.|+++.+..+|+........+.+||.+.|.+.+..
T Consensus 388 ~~~G~~~G~~qs~s---------Rs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 388 VLIGLFMGGIQSAS---------RSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred HHHHHHhhhHHHHH---------HHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67888888666555 799999999999999999999999999999999999999977
No 124
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.89 E-value=1.7e-08 Score=92.21 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=89.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|.|..+.|++.+++.++..+++++.|.++||+||| ........... ... ...... .. +..+.+++
T Consensus 30 ~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~-----~~~~~~~~~~~-~~~-~~~~~~--~~-~~~~~l~i 99 (382)
T PRK11128 30 WLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQL-----IPALRLLALLT-LLF-AVAFWF--GA-HSFWLLFV 99 (382)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcch-----HHHHHHHHHHH-HHH-HHHHHH--hc-ccHHHHHH
Confidence 5677899999999999999999999999999999999985 21101111111 101 111111 11 22335566
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++.|++.+...+.. .++..+. .++|+++.+..+...++|..++|.+++++.++. ||+.
T Consensus 100 ~~~l~g~~~~~~~~~~---------~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~ 159 (382)
T PRK11128 100 AIGLFNLFFSPLVPLT---------DALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQA 159 (382)
T ss_pred HHHHHHHHHcccccHH---------HHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhH
Confidence 7777787766554544 3555554 345777888889999999999999999999975 7764
No 125
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.89 E-value=7.5e-08 Score=91.14 Aligned_cols=131 Identities=21% Similarity=0.287 Sum_probs=86.5
Q ss_pred eccCCChhHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLT-LFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~-~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+.+++.. ...++.++|.+++|+++||+|+| +.+.... .+..+.......+.. ...+.. .+...
T Consensus 251 ~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~-~l~~l~~l~~~~l~~-~~~~~~-~l~~~ 322 (491)
T PRK11010 251 RGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIFG-ILQGVSNAGYWLLSI-TDKNLY-SMGAA 322 (491)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHH-HHHHHHHHHHHHHHh-ccccHH-HHHHH
Confidence 458999999999875 55689999999999999999988 6533221 111111111111111 112221 23333
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.++..++.+....+. +++.++.++++.+++.+++.++..+++..+++++.|++.+.. ||+
T Consensus 323 ~~l~~~~~g~~~~~~---------~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~ 382 (491)
T PRK11010 323 VFFENLCGGMGTAAF---------VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWP 382 (491)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChH
Confidence 444343434333333 477889999999999999999999999999999999999975 654
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.89 E-value=6.3e-08 Score=87.39 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=88.1
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|.++.+.+++.....+...++.+++|++.||++|| +.+... ............ . .++ .+...+..
T Consensus 228 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~--~~~~~~~~~~~~--~--~~~-~~~~~~~~ 295 (375)
T TIGR00899 228 HELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLA--ALAGVAFYTGLA--A--DNS-LWALLMLQ 295 (375)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHH--HHHHHHHHHHHH--H--HHH-HHHHHHHH
Confidence 45789999999988888788888899999999999998 663332 222111111111 1 111 22444555
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.|++.+...+.. ..+.+|..|++ ++++.++.+...++|..++|.+.|.+.+.. ||+.
T Consensus 296 ~~~g~~~g~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~ 354 (375)
T TIGR00899 296 LLNAIFIGILAGIG---------MLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHA 354 (375)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh
Confidence 66677766544444 37788888765 568999999999999999999999999865 5553
No 127
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.88 E-value=1.7e-07 Score=88.68 Aligned_cols=126 Identities=12% Similarity=0.147 Sum_probs=92.9
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|+|+.++|+.+....++..+++++.|++.||+|+| +++. .+..+.......... .....+. +......+
T Consensus 289 v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~--~g~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~ 359 (495)
T PRK14995 289 VHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----LVAT--GGMALSALSFYGLAM-TDFSTQQ-WQAWGLMA 359 (495)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHH--HHHHHHHHHHHHHHH-hcCCCch-HHHHHHHH
Confidence 4799999999999999999999999999999999998 6633 222222111111111 1222222 24455677
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.|++.+...+.. ...+.+.+|++.++.+.++.+...++|+++|+.+.|.+.++.
T Consensus 360 l~G~g~g~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 360 LLGFSAASALLAS---------TSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHhHHHHHHHH---------HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888655544 377788899999999999999999999999999999998753
No 128
>PTZ00207 hypothetical protein; Provisional
Probab=98.88 E-value=8.6e-08 Score=92.00 Aligned_cols=123 Identities=15% Similarity=0.058 Sum_probs=81.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLP-DDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (279)
+++|+|..+.+++.++. ....++++++|++.||+|+| +++.+... +......+..+... ......+.+++.
T Consensus 55 ~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R-----~vllig~l--l~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPR-----PIFVLSMT--VFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH-----HHHHHHHH--HHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 46899999999988764 34445677899999999999 77443322 22222222222111 111234467778
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
+++.|++.++..++. ...+.+.+| +.||++.|+......+|+++.+.+...+
T Consensus 127 r~l~G~G~~~~~~~~---------~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 127 NGLMTLGCMLFDLGA---------VVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888898887655544 266778886 7789999999999999998644444433
No 129
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.88 E-value=1.2e-07 Score=86.70 Aligned_cols=135 Identities=14% Similarity=0.092 Sum_probs=86.3
Q ss_pred ceeccCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTI-AGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
|+++.|+++.+.+++....++ ..+++.+++|++.||+|+| +.+...........+...........+. .....
T Consensus 234 ~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 307 (390)
T TIGR02718 234 YLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-----RTFILGVGLAGSLALLWFAQAAFWLAPG-IAVAW 307 (390)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHcccCCc-HHHHH
Confidence 456789999999999888764 6677899999999999998 6643322211111111111111001111 11222
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCC-CchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPE-RSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
....+.+++.+...+.. ...+.+..++ +.+++.+++.+...+++..++|.+.|.+.++. ||+
T Consensus 308 ~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~ 370 (390)
T TIGR02718 308 SCSAFGSLITGITSVAI---------YTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYA 370 (390)
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccH
Confidence 33333344455444433 3555566665 88999999999999999999999999999976 554
No 130
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.88 E-value=2.6e-08 Score=89.13 Aligned_cols=124 Identities=14% Similarity=0.145 Sum_probs=93.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|.+..+.+++.....++.+++.++.+++.||++|| +++... ..+......... .. .. + .+...+..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~--~~~~~~~~~~~~-~~-~~-~-~~~~~~~~~ 309 (365)
T TIGR00900 241 YLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGA--IFVIGLAILVVG-LT-PP-N-FPLFLVLWF 309 (365)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHH--HHHHHHHHHHHH-hh-ch-h-HHHHHHHHH
Confidence 3789999999999999999999999999999999998 663322 221111111111 11 11 1 335566677
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.|++.+...+.. ..++.|.+|++.|+++.|+.+...+++..++|.+.|.+.++.
T Consensus 310 ~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 310 AIGVGYGPINVPQ---------GTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888877655544 488999999999999999999999999999999999998864
No 131
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.87 E-value=4.1e-08 Score=93.37 Aligned_cols=124 Identities=21% Similarity=0.255 Sum_probs=94.4
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|.++...|+++++.++|+++|+++.+++.+|++++ +++.. +.+.... ..+. +...+ ..+..++.+
T Consensus 247 ~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~--~~~~~a~--~~~~--lal~~-~~~~~~~~l 314 (524)
T PF05977_consen 247 DVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLL--ASLLFAL--ALLL--LALSP-SFWLALIAL 314 (524)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHH--HHHHHHH--HHHH--Hhcch-HHHHHHHHH
Confidence 35788999999999999999999999999999998887 55322 2221111 1111 11222 233666778
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.|++........+ +.+++.+|++.||+++|+.+.....+..+|..+.|.+.++.
T Consensus 315 ~l~G~~~~~~~~~~~---------t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 315 FLAGAAWIIANSSLN---------TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888775555553 88999999999999999999999999999999999999977
No 132
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.87 E-value=9.3e-08 Score=88.81 Aligned_cols=127 Identities=17% Similarity=0.128 Sum_probs=76.7
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.+.+.++..++..+++++.|+++||++|| +.+........ + ................ ..+...
T Consensus 272 ~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~ 343 (432)
T PRK10406 272 NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAA-L-FTVPILSALQNVSSPY-AAFGLV 343 (432)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHH-H-HHHHHHHHHHcCCcHH-HHHHHH
Confidence 35789998999988888888899999999999999999 65333222111 1 1111111111111111 222222
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHH-HhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESIL-SSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g-~~i~~~~~g~l~~~~ 148 (279)
.+.+++.+...... +.+.+|.+|++.|+++.|+.+.+.++. +...|.+.+++ +..
T Consensus 344 ~~~~~~~~~~~~~~---------~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~ 399 (432)
T PRK10406 344 MCALLIVSFYTSIS---------GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSI 399 (432)
T ss_pred HHHHHHHHHHHHHH---------HHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHh
Confidence 22222322222222 478899999999999999998876653 45577777754 443
No 133
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.87 E-value=2.2e-08 Score=91.44 Aligned_cols=120 Identities=17% Similarity=0.221 Sum_probs=85.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC-C-chhHHHHHHHHH
Q 037387 8 FSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD-P-STGFMRGLVLVI 85 (279)
Q Consensus 8 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~i 85 (279)
++....+.+..+..++.++|+++.||+.||+||| ++ ....+++.+...++..+..... + ...+++..++++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK-----~v--YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK-----KV--YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch-----hh--hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHH
Confidence 6677888999999999999999999999999999 76 4444444333333222222222 2 344578889999
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHH
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGL 143 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~ 143 (279)
+|++.|.-+|.. .++++|....+.||+-.+..-+++..|...|.++.-+
T Consensus 154 LGiGIGGDYPlS---------AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 154 LGIGIGGDYPLS---------ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred hhccccCCCcch---------HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 999999777766 4889999999999987777666555555444443333
No 134
>TIGR00895 2A0115 benzoate transport.
Probab=98.87 E-value=1.8e-08 Score=91.24 Aligned_cols=121 Identities=21% Similarity=0.202 Sum_probs=89.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+..|++..+.+++.+...++.+++.++.|+++||++|| +.........+ .. .++.. ... + .+...+.
T Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~--~~-~~~~~-~~~--~-~~~~~~~ 344 (398)
T TIGR00895 277 MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAV--FA-VLVGS-TLF--S-PTLLLLL 344 (398)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHH--HH-HHHHH-Hhh--C-HHHHHHH
Confidence 345789999999999999999999999999999999987 55322222211 11 11111 111 1 1244556
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
.++.|++.+...+.. +++++|.+|++.|+++.|+.+.+..++..++|.+.|++
T Consensus 345 ~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 345 GAIAGFFVNGGQSGL---------YALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHH---------HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 677788777555555 58999999999999999999999999999999999875
No 135
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=8.7e-07 Score=82.28 Aligned_cols=170 Identities=16% Similarity=0.188 Sum_probs=110.6
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|.++....+.+.....+.+++.++..++++|+|+| ++..+. .++.+ +..+.+.+.+ .+..++.++..+
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~--~~~~~-i~~~~~~f~~--~~~~~l~~~~~~ 335 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIG--LLLLA-VGYLLLYFTP--AGSVVLIVVALI 335 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHH--HHHHH-HHHHHHHhhc--CcchHHHHHHHH
Confidence 3577777777888888888888899999999999999 774443 22222 2223333333 233335566667
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCCCCcc
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKPVPKE 157 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~~~~~ 157 (279)
+.+++.+...+.. |++++|+++ .+..|..+|...++..+|.+++..+.|++.... ||.+...
T Consensus 336 i~~~g~~~~~~l~---------wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~-Gyv~~~~- 404 (467)
T COG2211 336 IAGVGTGIANPLP---------WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI-GYVPNVS- 404 (467)
T ss_pred HHHHHhhcccccc---------HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCcc-
Confidence 7777777554433 899999876 466788899999999999999999999999975 9987321
Q ss_pred ccCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH
Q 037387 158 ASNSAEVETDRENAASLAKALYTAIGIPMAICCFIYSFLYCTYPRERER 206 (279)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (279)
.|....+.........+|.++.+ +..+..++||-+++.
T Consensus 405 ----------~Q~~~al~gI~~~~~~~Pa~l~l-~~~i~~~~y~L~~~~ 442 (467)
T COG2211 405 ----------AQSASALFGIRFLFIILPALLLL-LAAIIIFFYKLNEKM 442 (467)
T ss_pred ----------cCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCCHHH
Confidence 12222333333344555555333 333334457665544
No 136
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.9e-08 Score=86.78 Aligned_cols=129 Identities=17% Similarity=0.105 Sum_probs=94.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+.+.+|+|+..++.+.+.......+.+++.|.++||+|++ .+. ...+.+..+..-..+. .+.. --..
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-----~~w-v~~a~~~tl~~H~~l~----Ft~l---sPy~ 357 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-----LWW-VASACILTLLGHSGLF----FTFL---SPYT 357 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-----ehh-HHHHHHHHHHHhhhHH----hhhc---cHHH
Confidence 4567999999999999998888999999999999999999 331 2222222111111111 1111 1234
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+.++|+..+....+. |..++-++|+++-|+++|+.++.+++|-++.|+++|.+.++-.+|.
T Consensus 358 ~m~~lGLsysllAcsl---------WP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 358 SMTFLGLSYSLLACSL---------WPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred HHHHHhhhHHHHHHHH---------hhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 4566787777554434 8999999999999999999999999999999999999998763444
No 137
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.82 E-value=5.5e-08 Score=91.12 Aligned_cols=127 Identities=13% Similarity=0.100 Sum_probs=91.2
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|+++.+.+++.....++.++++++.|++.||++|| +++... ..+............... ...+......+
T Consensus 285 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~g--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 356 (485)
T TIGR00711 285 VLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----KLVTIG--LILYAVGFYWRAFTFTPD-TPFLAIALPQF 356 (485)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----HHHHHH--HHHHHHHHHHHhccCCCC-CCHHHHHHHHH
Confidence 4799999999999999999999999999999999998 663322 222111111111111111 22224455567
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.|++.+...+.. .....+.+|++.++++.++.+....+|+++++.+.|.+.++.
T Consensus 357 l~g~g~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 357 IRGFGMGCFFMPL---------TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHH---------HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888877544433 366678889999999999999999999999999999998743
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.81 E-value=1.4e-07 Score=86.25 Aligned_cols=119 Identities=13% Similarity=0.236 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISW 92 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 92 (279)
.+++.++.+++..++.++.|+++||++|| +.+... ..+.... .+.. .... . .+.+.+..++.|++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~--~~~~~~~-~~~~-~~~~--~-~~~~~~~~~~~g~~~~~ 327 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITA--LIFSVLL-LIPM-SFVQ--T-PLQLGILRFLLGAADGA 327 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHH--HHHHHHH-HHHH-HHhc--c-HHHHHHHHHHHHhhhHh
Confidence 45566667788889999999999999998 663332 2221111 1111 1111 1 22455566777888776
Q ss_pred hhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 93 NPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
..+.. ..++.+..|++.+++.+++.+.+..+|..++|.+.|.+.+.. ||+.
T Consensus 328 ~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~ 378 (408)
T PRK09874 328 LLPAV---------QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRA 378 (408)
T ss_pred hHHHH---------HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhH
Confidence 55544 377788899999999999999999999999999999998865 5543
No 139
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.81 E-value=1.2e-07 Score=85.70 Aligned_cols=120 Identities=18% Similarity=0.139 Sum_probs=77.5
Q ss_pred ChhHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCc-----hhHH
Q 037387 9 SHGSTAFLLTL-----FTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPS-----TGFM 78 (279)
Q Consensus 9 s~~~~~~~~~~-----~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 78 (279)
++.+.+.+.+. ..++..+++++.|+++||+||| +.+... .++......+.. .. .+.. ..+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~l~~~--~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 98 (394)
T TIGR00883 28 GDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRK-----KTLVIT--LLMMGIGTLLIG-LL-PSYATIGIWAPIL 98 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhH-----HHHHHH--HHHHHHHHHHHh-hC-CChhhhHHHHHHH
Confidence 34445544433 2334457899999999999999 774332 222211111111 11 1111 0124
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++.+++.|++.+...++. ..++.|..|+++|++..++......+|..+++.+.+.+..
T Consensus 99 ~~~~r~l~G~~~~~~~~~~---------~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~ 157 (394)
T TIGR00883 99 LLLARLIQGFSLGGEWGGA---------ALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSY 157 (394)
T ss_pred HHHHHHHHHhhcccccccc---------HHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888877555555 4889999999999999999998888888888888776653
No 140
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.80 E-value=8.2e-08 Score=91.86 Aligned_cols=124 Identities=20% Similarity=0.215 Sum_probs=82.0
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
+|-+ ....|+.+...++..++.++.|.++|.+||| ++++.. .++.++ ...... ...+ ...++....+
T Consensus 74 iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~i~g--~~l~vv--G~Iv~a--tA~~-~~~~iag~~l 140 (599)
T PF06609_consen 74 IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFFIIG--SLLGVV--GSIVCA--TAQN-MNTFIAGMVL 140 (599)
T ss_pred cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHHHHH--HHHHHh--HHHHhh--cCCc-HHHHHHHHHH
Confidence 4443 4467888889999999999999999999999 763332 222111 111111 2222 2267778888
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.|++.+..... ...++|++|.+.|..+.++..........++|.+...+..+ .+||+
T Consensus 141 ~GvgaG~~~~~----------~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~WRw 197 (599)
T PF06609_consen 141 YGVGAGVQELA----------ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGWRW 197 (599)
T ss_pred HHHhhHHHHHH----------HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCcch
Confidence 89887766542 36689999999999877766654444444666666655544 37877
No 141
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=2.2e-07 Score=84.55 Aligned_cols=128 Identities=22% Similarity=0.343 Sum_probs=86.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
.+..|+|....+++...+++++++|++++|+++|| +.| +.+...... ... ..+.+...+. ..+...+.
T Consensus 239 ~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l~~~~~l-~a~--~~l~l~~~~~---~~~~~~~~ 306 (394)
T COG2814 239 ESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RALIAALLL-LAL--ALLALTFTGA---SPALALAL 306 (394)
T ss_pred HHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHHHHHHHH-HHH--HHHHHHHhcc---hHHHHHHH
Confidence 34679999999999999999999999999999999 665 442222111 111 1112222222 22355555
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.++.|+......... +...++ .-++.+..+.+++....++|.++|..++|.+.++. ||..
T Consensus 307 ~~~wg~a~~~~~~~~---------~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~ 366 (394)
T COG2814 307 LFLWGFAFSPALQGL---------QTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAA 366 (394)
T ss_pred HHHHHHHhhhhhhHH---------HHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHH
Confidence 666666655333322 234444 33677888999999999999999999999999984 6653
No 142
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.79 E-value=6.7e-08 Score=90.70 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=85.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCC------
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGD----TLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPD------ 71 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 71 (279)
|++.+|+++...+++..+..+.+.+.+++.|+++| |+||| +.++........+ ...++. ....
T Consensus 30 yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR-----rp~il~g~~~~~~-~l~ll~-~~~~~~~~~~ 102 (477)
T TIGR01301 30 YVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR-----RPFIAAGAALVAF-AVILIG-FAADIGHLFG 102 (477)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh-----HHHHHHHHHHHHH-HHHHHH-hCchhhhhcc
Confidence 56778999999999999999999999999999999 59999 6643322222211 111111 1110
Q ss_pred ----C-Cch--hHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCch--hhHHHHHHHHHHHHHhhHHHHHH
Q 037387 72 ----D-PST--GFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSR--TTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 72 ----~-~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
. ... .+..++.+.+..++......+. .++++|.+|+++| +.++++.+.+.++|+.+++.+++
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~---------rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC---------RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHH---------HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0123333444455555444434 4999999998865 57899999999999999999988
Q ss_pred HH
Q 037387 143 LL 144 (279)
Q Consensus 143 ~l 144 (279)
+.
T Consensus 174 ~~ 175 (477)
T TIGR01301 174 YS 175 (477)
T ss_pred HH
Confidence 75
No 143
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.79 E-value=3.2e-08 Score=88.95 Aligned_cols=126 Identities=16% Similarity=0.202 Sum_probs=97.3
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
.+-+.+++|++++...+...+.+++.|.+.||+|+| ..++.++..... ...++.+.. .++++++++.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~----sTilFafg~---sy~~l~vAR~L 168 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFL----STILFAFGN---SYPMLFVARSL 168 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHH----HHHHHHHcc---hhHHHHHHHHH
Confidence 456678999999999999999999999999999999 553333222111 111112222 33488999999
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCc-hhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERS-RTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.|++.....++. .+++++.+|++. |++++|+.-.+..+|-.++|+++|.+.+.. |++.
T Consensus 169 QgvgsA~~~tsg---------lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~a 227 (464)
T KOG3764|consen 169 QGVGSAFADTSG---------LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSA 227 (464)
T ss_pred hhhhHHHHHhhh---------HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcC
Confidence 999988766665 488999998875 699999999999999999999999999965 6654
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.79 E-value=9.4e-08 Score=87.27 Aligned_cols=130 Identities=16% Similarity=0.132 Sum_probs=89.2
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|+|..++|++.+...+...+++++.|.++||++|+ ........... ... .+.+.. .. +..+.+++
T Consensus 30 ~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~~~~~~-~l~-~~~~~~--~~-~~~~~l~~ 99 (382)
T TIGR00902 30 WLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHI-----IIALRLLALAS-AIF-AAAFSA--GA-HNAWLLFI 99 (382)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHHHHHHH-HHH-HHHHHH--hh-hhHHHHHH
Confidence 5678899999999999999999999999999999999886 32111111111 111 111111 11 22335556
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++.+.+.+...+... ++..+. .++|++++|..+...++|..++|.++|.+.++. ||+.
T Consensus 100 ~~~l~~~~~~~~~p~~~---------al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~ 159 (382)
T TIGR00902 100 AIGLFALFFSAGMPIGD---------ALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQN 159 (382)
T ss_pred HHHHHHHHHccchhHHH---------HHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhH
Confidence 66666766654444442 554443 467888999999999999999999999999975 7775
No 145
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.79 E-value=7.8e-08 Score=88.93 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=86.8
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC--chhHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP--STGFMR 79 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 79 (279)
|.+.+|+++.++|+++++..+...+..++.|+++||.++|+.++++.+... .........+++ ..+... ......
T Consensus 26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~--~~~~~i~~~~~~-~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIG--AIPFSIVLVLLF-TTPDFSATGKLVYA 102 (437)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHh--HHHHHHHHHHHH-hCCCCCcchHHHHH
Confidence 345789999999999999999999999999999999655544434543222 211111112222 222211 112234
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhccc-CCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIV-PERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
++..++.+.+.+...++. .++..|+. ++++|++..++......+|+.+++.+.+.+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~---------~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~ 162 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPY---------WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY 162 (437)
T ss_pred HHHHHHHHHHHHhhcccH---------hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666666444433 47788877 568899999998888888888887777776653
No 146
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.79 E-value=6.6e-08 Score=89.33 Aligned_cols=125 Identities=16% Similarity=0.204 Sum_probs=72.6
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
++|+|+.+.|++.+...++..+++++.|+++||+||| +.+.......... ........ .............+
T Consensus 40 ~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r-----~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~ 111 (420)
T PRK09528 40 INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK-----KHLLWIISGLLVL--FGPFFIYV-FAPLLQYNILLGAI 111 (420)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999 7643322221111 01011000 00000000111122
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccC--CCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVP--ERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.++..+....+.. ..+.+..+ .+.++..++..+...++|..++|.+.|.+.+
T Consensus 112 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 166 (420)
T PRK09528 112 VGGIYLGFGFLAGA---------GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN 166 (420)
T ss_pred HHHHHhhhhhccch---------hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh
Confidence 22222221111110 11222222 2345667888888899999999999999876
No 147
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.78 E-value=1.6e-07 Score=88.96 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=89.9
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL-----AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTG 76 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (279)
|+++.|.+..+.+.+ +...... ++.+++|.++||+ ||| +..+.......++. ...+... ......
T Consensus 38 ~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grr-----r~~ll~~~i~~~~~--~~~~a~~-~~~~~l 107 (491)
T PRK11010 38 WMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRR-----RGWLLATQLLLLVA--IAAMGFL-EPGTQL 107 (491)
T ss_pred HHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCc-----hHHHHHHHHHHHHH--HHHHHHc-CCcchH
Confidence 455678999999986 3344443 5889999999999 887 53222222211111 1111111 112233
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.+.+..++.+++.+...++. .++..|.+|+++|+++.++......+|..+++.+.+++.++..||+.
T Consensus 108 ~~l~~~~~l~~~~~a~~~i~~---------~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~ 175 (491)
T PRK11010 108 RWLAALAVVIAFCSASQDIVF---------DAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQG 175 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHH
Confidence 356666777788777666655 59999999999999999999999999999999999998874346664
No 148
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.78 E-value=9e-08 Score=87.68 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=80.4
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC-CchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD-PSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (279)
+++|+++.+.+++.++..++..+++++.|+++||+||| +.+....................+.. ........+.
T Consensus 31 ~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (396)
T TIGR00882 31 DVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-----KHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVG 105 (396)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999 66433221111111101111110000 0111123334
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.++.|++.+...+..+ .+..+..+ .++..++..+...++|..++|.++|.+.+ .+|+
T Consensus 106 ~~~~g~~~~~~~~~~~---------~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~ 162 (396)
T TIGR00882 106 GLYLGFVFSAGAGAIE---------AYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS--IDPQ 162 (396)
T ss_pred HHHHHHHhccchhhHH---------HHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc--cCch
Confidence 4556666554444332 44555433 23446777888889999999999998865 3555
No 149
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.78 E-value=1.5e-07 Score=86.50 Aligned_cols=128 Identities=10% Similarity=-0.077 Sum_probs=84.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+++.+.++......++..++.++.|+++||+++| +.+... ..+...................++..+..
T Consensus 244 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK15402 244 SGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----SLIRMG--LWPMVAGLLLAALATVISSHAYLWLTAGL 316 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHH--HHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 45789999999888888888999999999999999998 663322 22111111111111101112222455666
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.|++.+...+..+ ... ...+++.++++.++.+....++..+|+.+.+++.+..
T Consensus 317 ~~~g~g~~~~~~~~~---------~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 317 SLYAFGIGLANAGLY---------RLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHHHHHhhhHH---------HHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 777777765444332 333 3345589999999999999999999999999887654
No 150
>TIGR00898 2A0119 cation transport protein.
Probab=98.77 E-value=1.7e-07 Score=88.50 Aligned_cols=107 Identities=22% Similarity=0.166 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIA 96 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 96 (279)
..+.++..+++.++.++++||+||| +.+... .++.... .+.....+.... +......++.+++.+...+.
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~--~~~~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 430 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRR-----YTMAAS--LLLAGVA-LLLLLFVPVDLY--FLRTALAVLGKFGITSAFQM 430 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHH--HHHHHHH-HHHHHHcCCCch--HHHHHHHHHHHHHHHHHHHH
Confidence 3445677788899999999999999 663322 2221211 111222222211 13333444455555544444
Q ss_pred hcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 97 ANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 97 ~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
. +.+.+|.+|++.|+++.|+.+.+..+|+.++|.+.+
T Consensus 431 ~---------~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 431 V---------YLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred H---------HHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 4 588899999999999999999999999999999998
No 151
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.77 E-value=3.2e-07 Score=84.09 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=74.7
Q ss_pred eccCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTI-AGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++|+|+.+.|++.+...+ +..++.+.+++ +||+||| +.++........+ ..... . ...+ .+.+++.
T Consensus 44 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r-----~~~~~~~~~~~~~-~~~~~--~--~~~~-~~~l~~~ 111 (393)
T PRK15011 44 DEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDR-----KSLIVFCCLLGVL-ACTLF--A--WNRN-YFVLLFV 111 (393)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccch-----hHHHHHHHHHHHH-HHHHH--H--HhhH-HHHHHHH
Confidence 5689999999999876655 55566666666 9999999 6522222111111 11111 1 1122 2233222
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchh--hHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRT--TIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
..+.+...+...+.. ..+..+..+++.|. ...++.+...++|..++|++++.+.++. ||+.
T Consensus 112 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~ 174 (393)
T PRK15011 112 GVFLSSFGSTANPQM---------FALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTV 174 (393)
T ss_pred HHHHHHHHHhhHHHH---------HHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHH
Confidence 223332223333433 36666766665553 3346777888999999999999998865 6764
No 152
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.76 E-value=6.7e-08 Score=89.33 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
|++..+.+.+.....++.++|.+++|+++||+++| +..... ........ ..+. .. ..... ......++.
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-----~~~~~~-~~~~~~~~-~~~~-~~-~~~~~--~~~~~~~~~ 343 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-----KHHTAL-PYLFAAAG-WLLA-SA-TDHNL--IQLLGIIMA 343 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-----HHHHHH-HHHHHHHH-HHHH-Hh-cCCHH--HHHHHHHHH
Confidence 67888899999999999999999999999999987 432111 11111111 1111 11 11111 111112222
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+++.....+.. +....|.+|++.|++++|+.+.+.++|+.++|.+.|.+.+...+|.+
T Consensus 344 ~~g~~~~~~~~---------~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 344 SMGSFSAMAIF---------WTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HHHhhhhhhHH---------HhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 22222222222 35567789999999999999999999999999999999987534665
No 153
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.71 E-value=4.5e-07 Score=82.77 Aligned_cols=128 Identities=16% Similarity=0.133 Sum_probs=77.6
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|+++.+.+++.+...++.+++.++.|++.||+++| +++........ + . .+....... .. +...+..+
T Consensus 229 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~-i-~-~~~~~~~~~-~~--~~~~~~~~ 297 (382)
T PRK10091 229 ISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIV-L-A-LLMLFFFGG-MK--TASLIFAF 297 (382)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHH-H-H-HHHHHHHHh-hH--HHHHHHHH
Confidence 4799999999999999999999999999999999998 66333222111 1 1 111111111 11 13333334
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.+++.....+... .....+..|++.++.+ ..+....+|.++||.+.|++.+...+|+.
T Consensus 298 ~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~ 356 (382)
T PRK10091 298 ICCAGLFALSAPLQ--------ILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNY 356 (382)
T ss_pred HHHHHHHhhhHHHH--------HHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcch
Confidence 44444332222111 1334444455555543 34667889999999999999996556654
No 154
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.70 E-value=1.3e-10 Score=108.00 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 037387 10 HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLC 89 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 89 (279)
+...+++.+...++..+|++++|+++||+||| +.+... ..+.+. ..+...........+.+.+.+++.|++
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~--~~~~~i--~~~~~~~~~~~~~~~~~~~~R~~~G~~ 115 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRK-----PALIIS--ALLMII--GSILIAFAPSYNNFWMLLIGRFLIGFG 115 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccc-----cccccc--cccccc--ccccccccccccccccccccccccccc
Confidence 45678899999999999999999999999999 663222 222111 111111112111233788889999999
Q ss_pred hhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
.|...+.. +.++.|..|++.|+...++.+....+|..++..+.-
T Consensus 116 ~g~~~~~~---------~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 116 IGGAYVVS---------PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred cccccccc---------cccccccccccccccccccccccccccccccccccc
Confidence 99666655 599999999999998888888877777666655443
No 155
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.70 E-value=4.9e-07 Score=80.53 Aligned_cols=119 Identities=11% Similarity=0.080 Sum_probs=83.4
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
+|+++.+.++..+.+..+.++|.++++++.||+++| +++. ++..++.....+.. .. . .. ......++
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~-----~~l~--~~~~l~~~~~~l~~-~~-~--~~--~~~~~~~l 239 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG-----RYLA--FNAFLAVLLSIGAA-LT-H--GY--VAMWFVLA 239 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHH--HHHHHHHHHHHHHH-Hc-C--CH--HHHHHHHH
Confidence 689999999999999999999999999999999988 6633 22322222221111 11 1 11 22335557
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.|++.+...|.. .+...+..|++ .+++.++. ....+|+++.|.+.|.+.|..
T Consensus 240 ~g~~~s~i~P~~---------~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 240 LGLFNSIMFPTI---------FSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred HHHHHHHHHHHH---------HHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 788888766655 36677777754 34466664 567789999999999999976
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.69 E-value=6.6e-07 Score=80.95 Aligned_cols=124 Identities=19% Similarity=0.155 Sum_probs=79.4
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|.++.+.+++.....++.++++++.|++.||+++| +.+........ ....+...................
T Consensus 235 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 307 (385)
T TIGR00710 235 DIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFA--VSAVLLEITAILGLGSWAMIIGPM 307 (385)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHH--HHHHHHHHHHHhccchHHHHHHHH
Confidence 36789999999999999999999999999999999998 65333221111 111111111101111222334445
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
++.|++.+...+.. .....|..| +.++++.++.+.....++.+.+++.+.+
T Consensus 308 ~~~g~~~~~~~~~~---------~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 308 MFVGIGNSMISSIA---------MAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHHHHH---------HHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56677666444433 366677776 5788999999888877777766666644
No 157
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.69 E-value=2.9e-07 Score=82.93 Aligned_cols=129 Identities=17% Similarity=0.163 Sum_probs=84.6
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|+++.|++..+.+.+.+...++.++++++.|++.||+++| ++.+... ..+......... ..+ ... .. .
T Consensus 223 ~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~----~~~~~~~--~~~~~~~~~~~~-~~~-~~~---~~-~ 290 (355)
T TIGR00896 223 ILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQ----RGIVAVL--AVLQLVGLCGLL-FAP-MHG---LW-A 290 (355)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc----hHHHHHH--HHHHHHHHHHHH-Hhh-hhH---HH-H
Confidence 4456799999999999999999999999999999999544 1442222 111111111111 111 111 11 1
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhc-ccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAE-IVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGY 151 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~ 151 (279)
..++.|++.+...+.. ...+.+ ..+++.++.+.++.+.+..++..++|.+.|++.++..+|
T Consensus 291 ~~~l~g~~~g~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 291 WALVLGLGQGGAFPLA---------LTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HHHHHHHhhhhHhHHH---------HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3456677777554433 244444 344567788899988889999999999999999977333
No 158
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.66 E-value=1.4e-06 Score=78.78 Aligned_cols=126 Identities=17% Similarity=0.072 Sum_probs=99.4
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC-CchhHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD-PSTGFMRGL 81 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 81 (279)
.+.+.++..+++++...+..++.++++..|++.+|+|+| +-++.. +.+.. ..+.++.|.. ...+..+++
T Consensus 40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lg--L~l~a---vg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLG--LLLYA---VGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHH--HHHHH---HHHHHHhhhhhhhhHHHHHH
Confidence 356889999999999999999999999999999999999 553333 22211 1222222221 223347778
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
.+|+.|.|.+..-.+.| +++..+.|++..+.-..+.+.++.+|..++|.+++.+..+
T Consensus 110 ~lFila~Gi~~LetaaN---------p~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 110 ALFILASGIGLLETAAN---------PYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHhhhHHHHhccc---------hHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 88999999998888887 9999999998888889999999999999999999999874
No 159
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.66 E-value=1.2e-06 Score=79.96 Aligned_cols=125 Identities=17% Similarity=0.112 Sum_probs=91.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|+++.|.++.+.|++++...++.+++.++.+++.||+|+| +++. ++......... .. +..++ .+.+.+
T Consensus 231 ~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~--~~~~~~~~~~~-~~---~~~~~-~~~~~~ 298 (382)
T TIGR00902 231 YWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLL--ISAIACVGRWA-II---GAIEA-FPLIFL 298 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHH--HHHHHHHHHHH-HH---HhHhh-HHHHHH
Confidence 4567899999999999999999999999999999999998 6633 22222211111 11 11222 235566
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHH-HHHHHHhhHHHHHHHHHHHh
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRS-FESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~-~~~~g~~i~~~~~g~l~~~~ 148 (279)
..++.|++.+...++. ..++.+. |++.++++.++.+. ...+|..++|.++|++.++.
T Consensus 299 ~q~l~g~~~~~~~~~~---------~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 299 LQILHCGTFAVCHLAA---------MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6778888888655555 3778887 99999999999764 56788899999999999976
No 160
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.65 E-value=1.1e-06 Score=80.67 Aligned_cols=128 Identities=16% Similarity=0.247 Sum_probs=86.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+++|++..+.+++....+++.++++++.+++.||.+++ ..+... ..... ....+. .... . .+...+
T Consensus 243 ~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~--~~~~~-~~~~l~-~~~~--~-~~~~~~ 310 (394)
T PRK10213 243 YMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAP--LVLAV-SALVLT-LWGS--D-KIVATG 310 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHH--HHHHH-HHHHHH-HHhh--h-HHHHHH
Confidence 3456799999999999999999999999999999996444 332111 11111 111111 1111 1 224555
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
..++.|++.+...+.. ..++++..|+ .++++.++.....+++..+||.+.|++.+.. |+.
T Consensus 311 ~~~l~G~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~-g~~ 370 (394)
T PRK10213 311 VAIIWGLTFALVPVGW---------STWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNI-GLT 370 (394)
T ss_pred HHHHHHHHHHhhhHHH---------HHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-Chh
Confidence 6677788877555544 3677887874 4566777777888999999999999999865 444
No 161
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.64 E-value=7.5e-07 Score=81.37 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=71.7
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+++.+.+.+.+...++.+++.++.+++.||+||| +.+.... .+......... . ... ..........
T Consensus 232 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~--~~~~~~~~~~~-~-~~~-~~~~~~~~~l 301 (392)
T PRK10473 232 EQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQ--VLFLAAGITLA-L-SPS-HAVSLFGITL 301 (392)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHH--HHHHHHHHHHH-H-HHH-HHHHHHHHHH
Confidence 45799999999999999999999999999999999998 6633322 22111111111 1 111 1111222233
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
+..|++.++.. ....+..|.+.|+ +..+....++..+++.+.+++.++. |+.
T Consensus 302 ~~~g~~~~~~~-------------~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~-g~~ 353 (392)
T PRK10473 302 ICAGFSVGFGV-------------AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL-GIS 353 (392)
T ss_pred HHHHHHHHhHH-------------HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 33344433221 2334455655554 3344455677778888888888765 543
No 162
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=3e-07 Score=86.64 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=96.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
++.++...+.+.+.+++.++++++.++++.+.||++-. +.+.. ...+.++ +.++... ....+.+++.+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~-~~~~w~~-~~~~~~~-----~~s~~~~ialr 141 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSV-SGILWGL-FGFLTAA-----VHSFPGLIALR 141 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHH-HHHHHHH-HHHHHHH-----HhhhHHHHHHH
Confidence 46678888999999999999999999999999999965 44222 1222211 1111111 12233788889
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH-----HhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH-----HVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~-----~~~g~~~ 153 (279)
++.|++.+...|+.. .++...+.++.|+..+|+.++...+|+.+|..+...+.+ ...||++
T Consensus 142 ~llGl~es~~wP~~~---------~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~ 207 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVV---------AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRW 207 (495)
T ss_pred HHHHHHhcccchHHH---------HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCcee
Confidence 999999997777774 889999999999999999999999999998888877643 1346665
No 163
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.63 E-value=1e-06 Score=81.74 Aligned_cols=128 Identities=18% Similarity=0.336 Sum_probs=90.7
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
+|.+ ...+.+..+..++.+++.++.++++||+|+| +.+.. +..+......+.. ..+. ...+...+..++
T Consensus 256 l~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~~--~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~l 324 (428)
T PF13347_consen 256 LGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYII--GLLLAALGFLLLF-FLGP--GSPWLVLILFIL 324 (428)
T ss_pred hcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehhh--hHHHHHHHHHHHH-HHHh--hhHHHHHHHHHH
Confidence 3444 5567778888999999999999999999999 66333 3333222222222 2221 222366777778
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccC-------CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCCC
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVP-------ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKPV 154 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~~ 154 (279)
.|++.+...... +++++|+.+ .+..|..+|+.++...++.++++.+.|.+.+.. ||...
T Consensus 325 ~gi~~~~~~~~~---------~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~-Gy~~~ 390 (428)
T PF13347_consen 325 AGIGYGAFFVIP---------WAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV-GYDAN 390 (428)
T ss_pred hHhhhccccccc---------ccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh-CcCCC
Confidence 888877544433 688999887 355688999999999999999999999998865 88763
No 164
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.62 E-value=3.6e-07 Score=82.78 Aligned_cols=129 Identities=19% Similarity=0.274 Sum_probs=88.7
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC--CchhHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD--PSTGFMRG 80 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 80 (279)
.+.+|++..+++.+...+.+.+.+..+.+|+++||+|.+ |.+..... ....+..+.....+.. ........
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~--~~~~~~~~l~~~~~~~~~~~~~~~~~ 318 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFV--GMALAAALLSLFLTGFGHGGSFVVFV 318 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHH--HHHHHHHHHHccccccccCcchHHHH
Confidence 357899999999999999999999999999999999998 66333322 2222222222222111 12222344
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
...+..+++.+...-++ +.++..++|++.. .+.|+......+|+.+-|...|...+..
T Consensus 319 ~~~l~l~~~~G~GnGsv---------fk~Ip~if~~~~G-~v~G~vga~G~lGGf~lp~~~g~~~~~t 376 (417)
T COG2223 319 AVFLALFVFAGLGNGSV---------FKMIPVIFPKETG-AVTGIVGAIGGLGGFFLPLAFGVSLDLT 376 (417)
T ss_pred HHHHHHHHHhccCcchh---------eeechHHHHhhhh-HHHHHHHHhccccccchhHHHHHHHHhc
Confidence 44455556655333333 5778888887554 4999999999999999999999998876
No 165
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.60 E-value=3.1e-07 Score=83.38 Aligned_cols=123 Identities=15% Similarity=0.273 Sum_probs=93.3
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|++..+..++.....+.+++|++++|++.||+|.| +++...+...... .+..++... .. .+.++-.
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~~---~~~~~~~~~-~~---~f~i~gl 349 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSIA---ALYLIFLEG-EL---DFWILGL 349 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHHH---HHHHHHccc-cH---HHHHHHH
Confidence 6899999999999999999999999999999999999 7744444333322 222222212 22 2333334
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+.|++.|...... +++..+.+|+++.++.+|+.+......+.++|.+.+.+.+.+
T Consensus 350 l~g~s~G~~qA~S---------RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT 404 (438)
T COG2270 350 LVGTSLGGAQASS---------RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT 404 (438)
T ss_pred HHHHhcchHHHHH---------HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh
Confidence 5566666444433 699999999999999999999999999999999999999866
No 166
>PRK10133 L-fucose transporter; Provisional
Probab=98.59 E-value=1.6e-06 Score=80.94 Aligned_cols=121 Identities=16% Similarity=0.186 Sum_probs=84.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+++.++++.+..+.+++++|++++|++.||+++| +++... ..++.....+ ....+ .. .....+
T Consensus 288 ~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-----~~l~~~--~~~~~~~~~~-~~~~~---~~--~~~~~~ 354 (438)
T PRK10133 288 EIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-----KVLAAY--ALIAMALCLI-SAFAG---GH--VGLIAL 354 (438)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHH--HHHHHHHHHH-HHHcC---Ch--HHHHHH
Confidence 35799999999999999999999999999999999998 664333 2222211111 11111 11 224456
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+.|++.+...|.. .+...+..|++ .+.+.++.. ...+++.++|++.|.+.+..
T Consensus 355 ~l~glg~~~i~P~~---------~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 355 TLCSAFMSIQYPTI---------FSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred HHHHHHHHHHHHHH---------HHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhc
Confidence 67788888766655 47777777764 455777775 45578889999999998865
No 167
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.59 E-value=8.2e-07 Score=91.96 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=86.9
Q ss_pred eccCCChh-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHG-STAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~-~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++.. ..+++.++..++.++++++.|+++||++++ +++.+. .++......++. . .. ..+..++.
T Consensus 261 ~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~--~~~~~~~~~~~~--~--~~-~~~~~~~~ 328 (1146)
T PRK08633 261 EVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLG--ALGLALSLFLLP--T--AP-SLASVLVL 328 (1146)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHH--HHHHHHHHHHHH--H--hh-hHHHHHHH
Confidence 45788988 999999999999999999999999999987 542222 111111111111 1 11 22255566
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
.++.|++.+...+.. .+++.+.+|++.|++++|+.+++.+++..+++.+++.+..
T Consensus 329 ~~~~g~~~~~~~~~~---------~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 329 FFLFGFSAGLFIVPL---------NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHhhHHH---------HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788777555544 4888999999999999999999999998888777766644
No 168
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.58 E-value=2.4e-06 Score=78.45 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=84.7
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|.++.+.|++.+...++.++++++.+++.||.++| +++... ..++... . .+ . ..+ ..+...+..+
T Consensus 235 ~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g--~~~~~~~-~-~~-~--~~~-~~~~~~~~~~ 301 (393)
T PRK11195 235 ALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAG--ILMGLVV-L-LM-A--LQH-SLLPAYPLLI 301 (393)
T ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHH--HHHHHHH-H-HH-H--HHh-HHHHHHHHHH
Confidence 5799999999999999999999999999999998877 653332 2222111 1 11 1 111 2224555666
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCc-hhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERS-RTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
+.|++.+...+.. .+.+++..|++. +|++.++.+...+++..++..+.+.+.
T Consensus 302 ~~G~~~g~~~~~~---------~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 302 LIGALGGFFVVPM---------NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHhhhhhhhhH---------HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 7788877544444 377778766654 799999999999999999999988663
No 169
>PRK11043 putative transporter; Provisional
Probab=98.57 E-value=2.1e-06 Score=78.67 Aligned_cols=127 Identities=17% Similarity=0.073 Sum_probs=82.8
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHH-HHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQ-ISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
|++..|++..+.++......++..+|+++.+++.||+++| +..... ....++... ....... ..+. .+...
T Consensus 229 ~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~-~~~~-~~~~~ 300 (401)
T PRK11043 229 ILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE-----QLLPWLLVLFAVSVIA-IWLASLL-SHPS-LVPLL 300 (401)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHH-HHHHHHh-ccCc-HHHHH
Confidence 3456799999999988888899999999999999999988 543222 112221111 1111111 1122 22334
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+...+.|++.+...+..+ ....+..| +.++++.|+.+.....++..++.+.|.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 301 IPFCVMAAANGAIYPIVV---------AQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHH---------HHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 445556666665445442 55556665 578999999999888888899999988876
No 170
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.57 E-value=8.3e-07 Score=92.07 Aligned_cols=126 Identities=9% Similarity=0.100 Sum_probs=89.1
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH---------------hC
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLL---------------FL 69 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~ 69 (279)
.+|.++...+++++.+.++.++|+++.|+++++..++ +.+.... ++.++....+.+. .+
T Consensus 255 ~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (1140)
T PRK06814 255 TLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----LYVPIGA-LLMGLFGLDLAFASSSVPAEPAQLKSILVF 328 (1140)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----eeehHHH-HHHHHHHHHHHhcccccccccccccchhhh
Confidence 4789999999999999999999999999999887766 3321111 1111111111110 00
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 70 PDDPSTGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 70 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
... ...+.+.+..+++|++.+...+.. .+++++.+|++.||+++|+.+++..++..+++.+.|.+.+
T Consensus 329 ~~~-~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 329 LSK-RHGWRILIDLFGLAAAGGLYIVPL---------FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred hcc-cccHHHHHHHHHHHHHHHHhHHHH---------HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 122355566777788877555555 4899999999999999999999999999999999999875
No 171
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.55 E-value=3.6e-06 Score=77.45 Aligned_cols=126 Identities=8% Similarity=-0.069 Sum_probs=79.5
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRG 80 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
|.++.+.++.+.+++.++..++..++....+++.|| ++.+ +.+.. +..+.. + ....+.... +. +.+.
T Consensus 234 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~--~~~~~~-~-~~~~l~~~~--~~-~~~~ 301 (400)
T PRK11646 234 MVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMA--GLLIMS-L-SMFPIGMVS--NL-QQLF 301 (400)
T ss_pred hHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHH--HHHHHH-H-HHHHHHHhh--hH-HHHH
Confidence 344555577888888888777776666666666654 5444 33212 111111 1 111111111 11 2333
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+..++.+++.+...+.. .+++.+.+|++.|++++|+.+....+|..++|.+.|++.++.
T Consensus 302 ~~~~l~~~g~~~~~p~~---------~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 302 TLICLFYIGSIIAEPAR---------ETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred HHHHHHHHHHHHHHccH---------HHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 44455566655444444 478889999999999999999999999999999999999875
No 172
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.55 E-value=3.4e-06 Score=76.99 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=86.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.++.|+++.+.|.+.+...++.++..++.|++.||+++| +.+.. +....... . .... ..+ ..+.+.+
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~--~~~~~~~~-~-~~~~--~~~-~~~~~~~ 298 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLL--SAICGVVR-W-GLMG--STT-ALPWLIV 298 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHH--HHHHHHHH-H-HHHH--hhh-hHHHHHH
Confidence 3456799999999999999999999999999999999998 66332 22221111 1 1111 112 2235566
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHH-HHHHHhhHHHHHHHHHHHh
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSF-ESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~-~~~g~~i~~~~~g~l~~~~ 148 (279)
..++.|++.+...+..+ .+..+. +++.++++.++.+.. ..+|..++|.+.|.+.++.
T Consensus 299 ~~~l~g~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 299 IQILHCGTFTVCHLAAM---------RYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77778888776555553 666665 556678888887643 4566689999999999975
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.54 E-value=8.4e-07 Score=83.07 Aligned_cols=132 Identities=15% Similarity=0.041 Sum_probs=79.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHH-HHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRII-LAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+.+++.++..++..++.+++|+++||+++|.....+.. ....+.....+......... ..... +..++.
T Consensus 290 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~ 367 (465)
T TIGR00894 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY-LSAAF-YLTIII 367 (465)
T ss_pred HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-cCCch-HHHHHH
Confidence 4579999999999999999999999999999999886511111110 01111111111111111111 11111 133333
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
+.+.+++.+...+.. +....|..|. .+|.+.++.+....+++.++|.+.|.+.+.
T Consensus 368 ~~l~~~~~~~~~~~~---------~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 368 LTLANAVSSGPLAGV---------LINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHhhhhhhhh---------hhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 444444444333322 3555677665 889999999999999999999999888763
No 174
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.53 E-value=5.2e-06 Score=76.27 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=72.5
Q ss_pred eccCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFT-IAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|+++.+.+++....+ ++.+++.+++|++.||+++| +.+........ +............ ++ .+.+.+.
T Consensus 238 ~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~-l~~l~~~~~~~~~-~~-~~~~~~~ 309 (402)
T PRK11902 238 RGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQA-VSNLGYWVLAVTP-KH-LWTMALA 309 (402)
T ss_pred HhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHH-HHHHHHHHHHhcC-Cc-HHHHHHH
Confidence 457999999999887655 46899999999999999988 65322221111 1111111111111 12 1233333
Q ss_pred HH----HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 83 LV----IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 83 ~~----i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+ ..|++.+...... ..++++.+|. +..++.....+++..++++++|.+.++. ||+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~ 369 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALL---------MALCNRSFSA----TQYALLSALASVGRVYVGPTSGYLVEAY-GWP 369 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHhcCCCCcH----HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChH
Confidence 32 3334333222222 2555555554 4455666666777776777899999976 665
No 175
>PRK09669 putative symporter YagG; Provisional
Probab=98.53 E-value=9.7e-07 Score=82.26 Aligned_cols=134 Identities=11% Similarity=0.079 Sum_probs=84.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC--CchhHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD--PSTGFMR 79 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 79 (279)
|.+.+|+|+..+|.++++..+...+..++.|+++||.+.|+.++++.++. +.........+.+ ..+.. ....++.
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~--~~~~~~i~~~l~f-~~p~~~~~~~~~~~ 112 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLW--FAIPFGVVCLLTF-YTPDFGATGKIIYA 112 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHH--HHHHHHHHHHHHH-hCCCCCcchHHHHH
Confidence 45678999999999999999999999999999999965554443455322 2111111111222 22221 1112233
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhccc-CCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIV-PERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
++..++.+.+.+....+. .++.+|+. ++++|++..+.-..+.++|+.+++.+...+...
T Consensus 113 ~~~~~l~~~~~t~~~ip~---------~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 113 CVTYILLSLVYTAINVPY---------CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHHHHHHHHHhhcchH---------HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344454444333323 48888887 557899888888888888888887776666553
No 176
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.53 E-value=2.2e-06 Score=80.11 Aligned_cols=116 Identities=15% Similarity=0.141 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC-chhHHHHHHHHHHHHHhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP-STGFMRGLVLVIMGLCISWNPI 95 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~ 95 (279)
..+..+.+.++.+++|+++||+|+| +++..... .........+...+... ...+...+.++...++.|....
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~~~i--~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng 364 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGV-----RVTLINFI--FMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG 364 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCch-----HHHHHHHH--HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch
Confidence 4445677888999999999999999 76433322 21212222222333221 2222333333343444443322
Q ss_pred hhcccccccCcccchhcccCC---------------------CchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 96 AANKYHLTTGYSPIFAEIVPE---------------------RSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 96 ~~~~~~~~~~~~~~~~e~~p~---------------------~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++ +.++..++|+ ++-|.+.|+......+|+.+-|.+.|...+..
T Consensus 365 sv---------fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~ 429 (462)
T PRK15034 365 ST---------FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT 429 (462)
T ss_pred HH---------HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc
Confidence 22 4666777764 14567888888888888899999999888765
No 177
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.53 E-value=5.1e-07 Score=80.40 Aligned_cols=118 Identities=29% Similarity=0.433 Sum_probs=84.7
Q ss_pred eeccCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 3 FELSGFS-HGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 3 ~~~~g~s-~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
.+.+|++ ..+.+.+.++..+++.+++++.|+++||+++| +.......... +....+...... ....+..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~ 304 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLI---LGALGLLLLPFS-SSPVWLII 304 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHH---HHHHHHCCSHHH-CHHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHH---HHHHHHHHHHHh-hhHHHHHH
Confidence 4567888 78999999999999999999999999999987 44222222211 111111111111 12224555
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAP 138 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~ 138 (279)
..++.|++.+...+.. ..++.+.+|++.++++.|+.+...++++.++|
T Consensus 305 ~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 305 ALFLIGFGFGIVFPIL---------FSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHCHHH---------HHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 6777888877666655 49999999999999999999999999998887
No 178
>PRK10054 putative transporter; Provisional
Probab=98.53 E-value=1.5e-06 Score=79.96 Aligned_cols=125 Identities=12% Similarity=0.070 Sum_probs=83.5
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
.+.+....+.+.....+......+..|++.||.++| +.+... +.+.... .... .... +..+...+..++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~--~~~~~~~-~~~~-~~~~--~~~~~~~~~~~~ 307 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAG--TLCFVIG-LVGF-IFSG--NSLLLWGMSAAV 307 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHH--HHHHHHH-HHHH-HHcc--hHHHHHHHHHHH
Confidence 456667778888888777777788889999999988 553222 2111111 1111 1111 122234455667
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+++.+...+.. ..++.+..|++.++++++..+ ...+|..+||.++|.+.|+. |+.
T Consensus 308 ~~~g~~~~~p~~---------~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~ 363 (395)
T PRK10054 308 FTVGEIIYAPGE---------YMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPW 363 (395)
T ss_pred HHHHHHHHHhhH---------HHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-Chh
Confidence 777766555544 478889999999999988654 56789999999999999976 444
No 179
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.52 E-value=2.2e-06 Score=78.19 Aligned_cols=122 Identities=12% Similarity=0.004 Sum_probs=72.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++.|++.. .+....+..+.+.++ .++++||+.||.. ++..........++ ....+....+.. .....
T Consensus 219 L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~--r~~~~~~~~~~~a~---~~~~~~~~~~~~---~~~~~ 286 (368)
T TIGR00903 219 LRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGL--RSIYIRAAALLIAA---FFLALAFELNRL---ALFAF 286 (368)
T ss_pred HHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhh--HHHHHHHHHHHHHH---HHHHHHHccccH---HHHHH
Confidence 455677754 566655555555555 4788888876510 02211111111111 111111111111 33444
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLA 145 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~ 145 (279)
..+.+++.....+.. +++.+|.+|++.|+++.|+.+...++++.++|.+.+.+.
T Consensus 287 ~~l~~~~~~~~~~~~---------~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 287 IGIAGLLMLPAYAII---------MDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHhhhhhHHHH---------HHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 455566555444434 588999999999999999999999999999999998776
No 180
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.50 E-value=3.6e-07 Score=86.62 Aligned_cols=133 Identities=22% Similarity=0.347 Sum_probs=98.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|.+..|++..++++++++.++..+++.++.|+++|+...+ +.....+++++... ..+..+...+ ++.+..
T Consensus 324 ~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~-----~~~~~~~~ll~~gl----~~~~~p~~~~-~~~l~~ 393 (509)
T KOG2504|consen 324 YAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR-----ALVLFLLTLLIAGL----ARLFLPFATT-YVGLIV 393 (509)
T ss_pred HHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-----hHHHHHHHHHHHHH----HHHHHHHhcc-HHHHHH
Confidence 3456899999999999999999999999999999998854 33222222222221 1122222222 236777
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
...++|++.+...... ...+.|+++.+.-..++|+...+..++..+||++.|++.|....|..
T Consensus 394 ~~~~fG~~~g~~~~l~---------~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 394 FSILFGFCVGSFSSLT---------PVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 7888899888554433 36889999999999999999999999999999999999887633543
No 181
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.50 E-value=1.1e-06 Score=79.17 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=75.0
Q ss_pred ceeccCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC------Cc
Q 037387 2 WFELSGFSHGSTAFLLTLFT-IAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD------PS 74 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 74 (279)
|.+++|++..+.+.+.++.+ ++.+++.+++|++.||+|+| +.+.... .+............... ..
T Consensus 235 ~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (356)
T TIGR00901 235 FLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-----YALLLFG--IVQALTNAGFVWLASNGHHDGITFP 307 (356)
T ss_pred HHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----HHHHHHH--HHHHHHHHHHHHHHhcCcccccccc
Confidence 34457999999998888766 67889999999999999988 5532222 11111111111111111 01
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHH
Q 037387 75 TGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFES 131 (279)
Q Consensus 75 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~ 131 (279)
..+.+....++.+++.+...+.. .++++|.+|++.|++.+|+.++..+
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAF---------VAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHH---------HHHHHHhcCCCccHHHHHHHHHHHh
Confidence 22345556667788777555555 4999999999999999999877654
No 182
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.49 E-value=3.7e-06 Score=76.84 Aligned_cols=135 Identities=20% Similarity=0.114 Sum_probs=78.3
Q ss_pred ceeccCCChhHHHHH--HHHHHHHHHHHHHHH-HHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHH
Q 037387 2 WFELSGFSHGSTAFL--LTLFTIAGSLGGLFG-GWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFM 78 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~--~~~~~~~~~~g~~~~-g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (279)
|+++.|+|..+.|++ .++..+...+.+++. ++..||+||| |..++.........+..+.. ......... +
T Consensus 27 ~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r-----~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 99 (390)
T TIGR02718 27 LLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRR-----RSWVLPMQCLVSACLASLAL-VGPDVAGAG-W 99 (390)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcc-----hhHHHHHHHHHHHHHHHHHc-CCcchhhHH-H
Confidence 567889999999997 355677777777776 5578889988 55322222222111111111 111111111 2
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.....++..++.....+... .+..|..+++.++...+.......+|..+++.+.+++.++. ||+.
T Consensus 100 ~~~~~~~~~~~~a~~d~~~d---------~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~-gw~~ 164 (390)
T TIGR02718 100 AVGLLACASLASATQDIATD---------GMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF-GQRP 164 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH
Confidence 23333444444444444443 56667777777776666666666777788888778888865 5553
No 183
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.48 E-value=4.3e-06 Score=76.57 Aligned_cols=124 Identities=8% Similarity=0.096 Sum_probs=83.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
+.+....+++.++..+...++.+..|++.||+|+| +++........ + . ... ..... +. +.+.+..++.
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~-l-~-~~~-~~~~~--~~-~~~~~~~~l~ 317 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMS-V-R-IIG-SSFAT--TA-LEVVILKMLH 317 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHH-H-H-HHH-HHhcC--Ch-HHHHHHHHHH
Confidence 55666788889888999999999999999999999 66333222111 1 1 111 11112 22 2445556666
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHH-HHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYAL-DRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~-~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
|++........ ..+..+..|++.++++.+. .+....+|+.+++.+.|++.+.. ||.
T Consensus 318 g~~~~~~~~~~---------~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~ 374 (396)
T TIGR00882 318 AFEVPFLLVGC---------FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQ 374 (396)
T ss_pred HHHHHHHHHHH---------HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccH
Confidence 76655332222 3566777888888887766 56788999999999999999975 554
No 184
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.48 E-value=1.3e-06 Score=82.16 Aligned_cols=129 Identities=12% Similarity=-0.026 Sum_probs=90.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhC---C--C-CCchhH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFL---P--D-DPSTGF 77 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~ 77 (279)
+.+|+++...|++....+++.+++..+.+++.+|++.| +++. ++.++............ . . .+. .+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~--~~~~l~~~~~~~~~~l~~~~~~~~gi~~-~~ 352 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFG--VTTLLYTLSSLFDLILVKRWNLAFGISD-EV 352 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHH--HHHHHHHHHHhCceeeeeccccccCCCC-ee
Confidence 46899999999999999999999999999999999988 6633 22222111111100000 0 0 011 11
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhC
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYG 150 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g 150 (279)
.+....++.+++.+....+. ..++++.+|++.+++.+++.+++.++|..+++.++|.+.++. |
T Consensus 353 ~~~~~~~l~~~~~g~~~~~~---------~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g 415 (468)
T TIGR00788 353 FVLGDSIIAEVLAQLKFMPF---------LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-G 415 (468)
T ss_pred eeeehhHHHHHHHHHHHccH---------HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 23334455566666444444 388999999999999999999999999999999999998865 5
No 185
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.46 E-value=8.4e-07 Score=82.16 Aligned_cols=126 Identities=24% Similarity=0.298 Sum_probs=87.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCCcchHHHH-HHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL-AKRLPNSGRIILA-QISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+|+|.+++.-+++.++.-.-+..+++||++||+ |+| +.+++ .+.+.+ .-+.+..+..... ..+.+.+
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~tI~lGail~~i-----Gh~~L~~~~~~~~-~gl~i~L 124 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RTIVLGAILMAI-----GHLVLAISSVSGP-GGLYIGL 124 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHH-----HHHHHhccccccc-cHHHHHH
Confidence 569999998888888877778899999999995 887 55222 222222 1222222220111 1566667
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCC--chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER--SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+++.+.|..=+.+ ..++.|..|++ +|-.++++.+...++|+.++|.+.+++.++. ||.
T Consensus 125 ~~I~iG~Gl~K~Ni---------S~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~ 185 (498)
T COG3104 125 ALIIVGTGLFKPNI---------SSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWH 185 (498)
T ss_pred HHHHhccccccccH---------HHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHH
Confidence 77777877555544 48888888753 3666899999999999999999999999986 544
No 186
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=7.9e-07 Score=79.49 Aligned_cols=102 Identities=18% Similarity=0.081 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhhhc
Q 037387 19 LFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIAAN 98 (279)
Q Consensus 19 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 98 (279)
+..+...-|.++.++++||+||| +. ...+++++..+...+ ....+.+ ...+.+|..-++.+....++
T Consensus 389 itslaefPGlLIt~~iverlGRK-----kT--Mal~l~~f~iflfll--~~c~~rn---~~tvllf~arafisg~fqva- 455 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRK-----KT--MALSLILFGIFLFLL--TTCKTRN---AYTVLLFTARAFISGAFQVA- 455 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcch-----hH--HHHHHHHHHHHHHHH--HHhcCcc---hhHHHHHHHHHHHhchheEE-
Confidence 45677888999999999999999 55 333333322222222 2223333 34445556666666555555
Q ss_pred ccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 99 KYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 99 ~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
++|..|++|...|+++.|.......+|+.+.|.+.
T Consensus 456 --------YvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 456 --------YVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred --------EEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 79999999999999999999999999999999888
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=98.44 E-value=5.2e-06 Score=77.45 Aligned_cols=118 Identities=17% Similarity=0.262 Sum_probs=67.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCC--CCCc-hhHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLP--DDPS-TGFMRG 80 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~ 80 (279)
+..|+++.++|.+.++..+...+..++.|+++||.++|+.++++.+... .+.......+.+ ..+ .... ..+..+
T Consensus 37 ~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 113 (448)
T PRK09848 37 DVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFG--TAPLMIFSVLVF-WVPTDWSHSSKVVYAY 113 (448)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHH--HHHHHHHHHHHH-hCcCCCCcchHHHHHH
Confidence 4579999999999999999999999999999999866644444442221 111111111111 122 1111 122233
Q ss_pred HHHHHHHHHhhhhhhhhcccccccCcccchhcccCC-CchhhHHHHHHHHHHHH
Q 037387 81 LVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPE-RSRTTIYALDRSFESIL 133 (279)
Q Consensus 81 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~a~~~~~~~~~~g 133 (279)
+..++.+.+.+...++. .++..++.++ ++|.+..+.-....+++
T Consensus 114 ~~~~~~~~~~~~~~~~~---------~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 114 LTYMGLGLCYSLVNIPY---------GSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred HHHHHHHHHHHHhcccH---------hhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 44455566666444433 3666666544 56776655544333443
No 188
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.44 E-value=6e-06 Score=77.72 Aligned_cols=129 Identities=15% Similarity=0.179 Sum_probs=80.8
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC-c-h
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL----AKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP-S-T 75 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 75 (279)
|.+.+|+++..+|.++.+.-+...+..++.|+++||. ||| ++.++. +....... ..+++..+..+ . .
T Consensus 33 yt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grr----rp~il~--g~i~~~i~-~~llf~~p~~~~~~~ 105 (473)
T PRK10429 33 YTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKF----KPWILI--GTLANSVV-LFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCc----chhHhh--hhHHHHHH-HHHHHcCCCCCccHH
Confidence 3456799999999999999999999999999999955 665 344222 22221111 11222222111 1 1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhccc-CCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 76 GFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIV-PERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 76 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
.+++++..++.+++.....++. .++..|+. ++++|.+.++.-..+.++++.+.+.+...+..
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~---------~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~ 168 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPF---------WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN 168 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchH---------HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333444555555444433 58889988 68899988888777777777666666555544
No 189
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=6.1e-06 Score=78.52 Aligned_cols=127 Identities=19% Similarity=0.287 Sum_probs=78.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHH-HHHHHHHHHHHHHHHhCCC------CCchh
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQ-ISFGSGIPIAAVLLLFLPD------DPSTG 76 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~ 76 (279)
+..|.+... .....+.++...++.+++.++.||+||| ++++.. .++.++..+.......... .....
T Consensus 323 ~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (513)
T KOG0254|consen 323 KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWL 396 (513)
T ss_pred HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHH
Confidence 344555433 4445566777888888889999999999 654333 3344433333333222211 11222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
.+...+.++..+..++.+. . |.+.+|++|.+.|+++.++......+...+-......+..
T Consensus 397 ~~~~~~~~v~~f~~g~g~v--~--------w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~ 456 (513)
T KOG0254|consen 397 AIVFLCLFIFSFAIGWGPV--P--------WVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE 456 (513)
T ss_pred HHHHHHHHHHHHhcccccc--h--------hhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2444555566666666655 4 7899999999999999999988888777655444444444
No 190
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=5.6e-06 Score=77.75 Aligned_cols=135 Identities=13% Similarity=0.150 Sum_probs=86.9
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCC-CCch-hHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPD-DPST-GFMR 79 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~ 79 (279)
|.+..|+++..+|.++.+.-+.-.+.-++.|+++||...|+.++++.++.. ....++ . ..+++..|. +... ..++
T Consensus 36 yt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g-~i~~~i-~-~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 36 YTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFG-ALPFGI-V-CVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHH-HHHHHH-H-HHHHHhCCCCCcchHHHHH
Confidence 446789999999999999999999999999999998655544444442222 111111 1 122222232 1111 1233
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhcccC-CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP-ERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+..+++..+......+. +++..|+.+ +++|++..+.-..+.++|..+++.+...+....
T Consensus 113 ~~~~~~~~~~~t~~~ipy---------~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPY---------CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHHHHHHHHHHhccH---------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444555555443333 588899876 788999999988888888888877776665543
No 191
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.40 E-value=2.3e-06 Score=81.16 Aligned_cols=129 Identities=16% Similarity=0.090 Sum_probs=91.8
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
++.++.+..+++|+.++......+.+++.+.+.||+|.| .+.+ ++.++......+.. ...+.+.+++..
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R-----~v~i--~G~~v~~~g~~lss----F~~~i~~l~lt~ 141 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR-----TVMI--AGGLVAALGLLLSS----FATSLWQLYLTF 141 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch-----HHHH--HHHHHHHHHHHHHH----HHhhHHHHHHHH
Confidence 456788889999999999999999999999999999999 6522 22222111111111 222333355556
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
-++.|+|.++...+.. .++. ...+++|+.|.|+......+|..+-|.+...+.+.. ||++
T Consensus 142 gvi~G~G~~~~~~pai---------viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~ 201 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAV---------VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRG 201 (509)
T ss_pred HHHhhccchhhhcchh---------hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHH
Confidence 6777888886555442 4445 445678999999999988999999999999999876 8876
No 192
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.40 E-value=1e-05 Score=73.88 Aligned_cols=123 Identities=16% Similarity=0.038 Sum_probs=81.2
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+|+++.+.+++.....++..+++++.+++.||++++ .. .......++.......... ...+ .+......+
T Consensus 237 ~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 307 (394)
T PRK11652 237 VLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MW-QSVICCLLAGLLMWIPGWF--GVMN-VWTLLVPAA 307 (394)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-HHHHHHHHHHHHHHHHHHh--cccc-HHHHHHHHH
Confidence 3789999999998888888899999999999998854 22 1222222211111111111 1111 224455566
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.+++.+...+.. ..+..|.+| +.++++.++.+....+|+.+++.+.+.+..
T Consensus 308 ~~~~g~~~~~~~~---------~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 308 LFFFGAGMLFPLA---------TSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHH---------HHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 6777777555555 367778777 577889999999999999999988887754
No 193
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.39 E-value=1.8e-05 Score=72.97 Aligned_cols=132 Identities=18% Similarity=0.167 Sum_probs=87.9
Q ss_pred ceeccC-CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchh--HH
Q 037387 2 WFELSG-FSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTG--FM 78 (279)
Q Consensus 2 ~~~~~g-~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 78 (279)
|.++.| .+....+.++++..++-++.-...+++..|+|.| +++.+.. ...+.= ..++ ....++... ..
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~--~~~~vR-~~l~-a~~~~~~~~~~~~ 303 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLAL--VAYAVR-WLLY-AYFSDPWPFIVAL 303 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHH--HHHHHH-HHHH-HHhcCCcHHHHHH
Confidence 456666 6777788888888888888888899999999998 6633332 221111 1111 111122211 11
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHH-HHHHHhhHHHHHHHHHHHhhCCC
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSF-ESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~-~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
..+...+.|++.+....+. ..++.+.+|++.|+++.++.+.. ..+|..+|..++|++.++. |.+
T Consensus 304 ~~l~q~lhG~tf~~~~~a~---------~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~-g~~ 368 (400)
T PF03825_consen 304 QLLGQLLHGLTFGLFHAAS---------VRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF-GAR 368 (400)
T ss_pred HHHHHhhhhHHHHHHHHHH---------HHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cch
Confidence 1222345787777554444 38999999999999999998875 5688899999999999976 444
No 194
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.35 E-value=1.4e-05 Score=72.38 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=36.1
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
.+.+|+++.+.+++.....++.++++++.|++.||+|+|
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 345799999999999999999999999999999999999
No 195
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.34 E-value=1.6e-06 Score=80.83 Aligned_cols=126 Identities=11% Similarity=0.117 Sum_probs=92.2
Q ss_pred ceec--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCc-hh
Q 037387 2 WFEL--SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLA--KRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPS-TG 76 (279)
Q Consensus 2 ~~~~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (279)
|+++ .+.+....|++.+...++..+++++.|++..|.+ || +++...+.++++-. +.+.+...++ ..
T Consensus 60 Yl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~-----Pli~s~ii~~~g~l----lY~~l~~~~~~~~ 130 (488)
T KOG2325|consen 60 YLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK-----PLIVSFLIAIIGNL----LYLALAYVPNGVK 130 (488)
T ss_pred hhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCccc-----CHHHHHHHHHHHHH----HHHHHHhcccchH
Confidence 4555 6778889999999999999999999999999988 44 65433333333222 2212222222 55
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+++++++++.|++.+.... . ..|+++..-.++|.++++.......+|..+||.+...+..
T Consensus 131 y~mL~~R~l~Gvg~~n~a~--l--------R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 131 YLMLVARILTGVGVGNFAV--L--------RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHcCcCcccHHH--H--------HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 6889999999999875544 4 6999998888888889999888778888888877765543
No 196
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.32 E-value=1.2e-05 Score=73.15 Aligned_cols=131 Identities=21% Similarity=0.248 Sum_probs=89.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hcCCCcchHHHHH-HHHHHHHHHHHHHHHhCCC------
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLA-----KRLPNSGRIILAQ-ISFGSGIPIAAVLLLFLPD------ 71 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-----rr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------ 71 (279)
.++++++.-.+.+.++..+... ..+..|+.+|+.+ || .+.++.. ..+..+..+.....+.+..
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rR----tPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRR----TPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCc----hhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 4688899999988888877766 4889999999998 66 2332222 2222222121222222222
Q ss_pred CCchhH--HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 72 DPSTGF--MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 72 ~~~~~~--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+...+ ...+...+.|++.+...++. -+++.|..|+++|+++.++.....-+|..++..+.|.+.+.+
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~---------lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSF---------LALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHH---------HHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 122222 33445556677777666655 499999999999999999999999999999999999888754
No 197
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.30 E-value=6e-06 Score=73.98 Aligned_cols=125 Identities=16% Similarity=0.178 Sum_probs=86.6
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|.+..+..++......+..+++..+|.++|++||| +. ..+..........+ -..+++ +.++++...
T Consensus 107 ~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr-----~~--f~~T~l~t~v~~~i----s~~spn-f~~L~~f~~ 174 (528)
T KOG0253|consen 107 VWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRR-----KG--FNLTFLVTGVFGVI----SGASPN-FASLCVFRA 174 (528)
T ss_pred hhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcc-----hh--hhhhHHHHHHHHHh----hcCCCC-eehhhHHHH
Confidence 3567888899999999999999999999999999999 55 22222222211111 123333 336777788
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+.|++.|.. |.. .++-.|..|...|..-.-+. ++..+|..+...+.-....+. ||++
T Consensus 175 l~~~g~gg~-pv~---------~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-gwr~ 231 (528)
T KOG0253|consen 175 LWGFGVGGL-PVD---------SAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-GWRY 231 (528)
T ss_pred HHhccCCCc-cHh---------HHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-hHHH
Confidence 888888863 333 37888999999998654444 777788777776666666654 7775
No 198
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.29 E-value=1.5e-05 Score=75.04 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=84.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|++..+.+.+.++..+...+-.+ +|.++||++....++++.+... .+++. ..... .+...++......+.+
T Consensus 54 ~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~--~~l~~-~~~~~--~l~~~~~~~~~~~~~~ 127 (468)
T TIGR00788 54 DDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLS--GLLGS-AILYG--LLPGKVSSAKVAAAFI 127 (468)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHH--HHHHH-HHHHH--hcccccchHHHHHHHH
Confidence 46899999999999999999999655 9999999972111112442222 22221 11111 1222222222334467
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhh---HHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTT---IYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~---a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.+++.+..-++. -.+..|..+ +.+.. ..++.....++|..+++.++|.+.+.. +|+.
T Consensus 128 ~l~~~~~a~~dv~~---------da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~-~~~~ 189 (468)
T TIGR00788 128 FLAALAKALYDVLV---------DSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT-LTRI 189 (468)
T ss_pred HHHHHHHHHHHHhH---------HHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc-Ccch
Confidence 77788877776666 488999888 44433 333444455689999999999998864 6664
No 199
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.27 E-value=2e-05 Score=67.89 Aligned_cols=123 Identities=20% Similarity=0.237 Sum_probs=79.6
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCC--CCchhHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPD--DPSTGFMRGL 81 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 81 (279)
+.+|+|.++...+.+...++..+| ++.|.+.|++|++ ..+.+. ............+.... .....|.+.+
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG--~~~~~~GY~~~~l~~~~~i~~~~~~~~~~ 101 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIG--AVLGFVGYGLLWLAVSGRIPSLPVWLMCL 101 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHH--HHHHHHHHHHHHHHHhCccCccchHHHHH
Confidence 468999999999999999998874 8899999999998 553332 22222222222322222 1234446666
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
..++.|.+.++...+.. ....+.+| +.||++.|+.-.+..+++++-..+...+
T Consensus 102 ~~~l~~~s~~~~~ta~l---------vt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 102 FLFLGGNSSCWFNTASL---------VTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHHHcccHHHhhhHHH---------HHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 66666666655444321 33446677 5799999999888888876655555444
No 200
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.23 E-value=1.3e-06 Score=81.05 Aligned_cols=132 Identities=17% Similarity=0.179 Sum_probs=85.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCc---
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGD----TLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPS--- 74 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (279)
|.+.+|+++...|+++.+..+...+..++.|+++| |+||| ++.+ . .+.........+++...|...+
T Consensus 28 ~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grr----rp~~-l-~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 28 YTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRR----RPWI-L-IGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccccc----ceEe-e-hhhHHHHHHHHHhhccccchhhhhh
Confidence 44567999999999999999999999999999999 67776 3442 1 2222211111222211121111
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccC-CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 75 TGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP-ERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 75 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
...+..+..+++.++......+. .++..|+.+ +++|.+..+.-..+..+|..+...+.+.+.+..
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~---------~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPY---------NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCch---------hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 11133444455566655444433 589999987 568999999988888888877777777777544
No 201
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.19 E-value=2.1e-05 Score=72.64 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=74.5
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
|++..|+|..++|.++++..+..+++.+++|+++||.+++ ++++ .+...++........ .... .+.+++
T Consensus 28 ~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~----~~~l--~~~~l~~~~~~~~~~----~~~~-f~~~~~ 96 (400)
T PF03825_consen 28 YLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA----KRIL--ALLSLLSALALLLLA----FSSS-FWWLFV 96 (400)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH----HHHH--HHHHHHHHHHHHHHH----Hhcc-HHHHHH
Confidence 6788999999999999999999999999999999998765 2552 222222221111111 1112 224445
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
.+++..++.....+..+ ++..+... .+..-+|-.+.++++|..++....
T Consensus 97 ~~~l~~~~~~p~~pl~d---------si~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~ 145 (400)
T PF03825_consen 97 IMLLFSFFFSPTMPLSD---------SIALSYLG--DRGKDYGRIRLWGSIGFIVAALAF 145 (400)
T ss_pred HHHHHHHHHccHHHHHH---------HHHHHHcc--cccCCCCcchhhhhHHHHHHHHHH
Confidence 55555655543334333 55555544 334467778888888887775553
No 202
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.19 E-value=2.9e-05 Score=69.45 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=85.3
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+.|+|+.++|.+.+...+.....++...++.+|...+ +.+......+.. .....+...|... ....
T Consensus 235 li~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~----r~~~~~~~~~~l---~G~~G~~~~P~~~-----~~lw 302 (395)
T COG2807 235 LIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ----RPLVVLALLLML---VGLVGLLLAPGQL-----PILW 302 (395)
T ss_pred HHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc----chHHHHHHHHHH---HHHHHHHHhhhhH-----HHHH
Confidence 346799999999999999999999999999999985433 133222211111 1111122222221 2222
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcc-cCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEI-VPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++|++.|...+... ..+..- ..++.-++-.++.+.++.+..++||.+.|++.|...+|..
T Consensus 303 ~~llG~G~G~~F~laL---------~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 303 ALLLGLGQGGAFPLAL---------TLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred HHHHhCccchHHHHHH---------HHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 5778888775555432 444443 4455666678888888888899999999999998755553
No 203
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.15 E-value=5.6e-05 Score=70.39 Aligned_cols=135 Identities=15% Similarity=0.164 Sum_probs=93.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCC-C-CchhHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPD-D-PSTGFMR 79 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 79 (279)
|.+..|+++..+|.++.+.=+.-++.-++.|+++||..+|+.+.++.++.. .+-...+..+.+ ..+. + .......
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g--~ip~~i~~~l~F-~~p~~~~~~k~~ya 115 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG--AIPFAIVAVLLF-ITPDFSMTGKLIYA 115 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH--hHHHHHHHHHHH-cCCCcccCcchHHH
Confidence 556789999999999999999999999999999999877777766653322 111111112222 2221 1 1222245
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhcccC-CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP-ERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+...+.+++++....+. .++..|+.+ +++|.+..+.-..+.++|..+...+.+.+....
T Consensus 116 ~vtY~l~~l~YT~vniPy---------~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~ 176 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPY---------GALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLF 176 (467)
T ss_pred HHHHHHHHHHHHheeCch---------hhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566667778877554433 588888864 678998888888888888888777777777654
No 204
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.13 E-value=6.1e-05 Score=69.81 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=35.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
++.|++..+.|++.+...++.+++++++|+++||+|||
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~ 68 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSA 68 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45899999999999999999999999999999999765
No 205
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.12 E-value=0.0001 Score=65.97 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=94.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+++|+|.+.+|++.++..++..+.+++..++..|+|.. +.+ ..++++.. ....+ - .....+.++...
T Consensus 40 ~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-----r~l--~~~Llli~--~G~~i-R---~~~~~~~L~~gt 106 (395)
T COG2807 40 QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-----RSL--FLALLLIA--AGILI-R---SLGGLPLLFLGT 106 (395)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-----HHH--HHHHHHHH--HHHHH-H---hcccHHHHHHHH
Confidence 46899999999999999999999999999999999998 662 22222211 11122 1 111223667777
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+.|.+++...... +..+-+-+|++.-. .+++.+...++++++++.+.-.+.++..||+.
T Consensus 107 ~l~G~gIav~nVLL---------PslIK~~Fpk~~~~-mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 107 LLAGAGIAVINVLL---------PSLIKRDFPKRVGL-MTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhhHHHHHHhh---------hHHHHhhcccchhh-HHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 77888877555544 68888888876554 89999999999999999999888887666776
No 206
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.12 E-value=9e-05 Score=68.57 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=76.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIM 86 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 86 (279)
+.+....+.+.+....+..+|.++++++.||+++| +++.. ....+..+..+.. . .... .....+++.
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-----~~l~i--~~~~~~~~~ll~~-~--~~~~---~~~~~l~~~ 331 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-----KVLMA--YAIIGMALCLGSI-F--AGGH---VGLYCLTLC 331 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHH--HHHHHHHHHHHHH-H--cCCh---HHHHHHHHH
Confidence 44555556666667788899999999999999998 66332 2222222212221 1 1111 334556677
Q ss_pred HHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 87 GLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
|++++...|.. ..+..+..+++.+..+..+... .+|+++.|++.|++.|+.
T Consensus 332 glf~s~~fp~i---------~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 332 SAFMSLMFPTI---------YGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHHHHHHH---------HHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHh
Confidence 77777555655 5888888887766534444433 389999999999999953
No 207
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.10 E-value=0.00012 Score=65.60 Aligned_cols=80 Identities=23% Similarity=0.160 Sum_probs=56.9
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+++.++....+..++.+.+.|.++||+||| +..+.....-. +..+.- .. +..+.+++.+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~---~scl~k----~~-~~~~~L~~GR 128 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYS---LSCLTK----HS-SNYPVLLLGR 128 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHH---HHHHHH----hc-cccHHHHHHH
Confidence 56899999999999999999999999999999999999 65222211111 111111 22 2344889999
Q ss_pred HHHHHHhhhhhhh
Q 037387 84 VIMGLCISWNPIA 96 (279)
Q Consensus 84 ~i~g~~~~~~~~~ 96 (279)
++.|++.+....+
T Consensus 129 vlgGiaTSLLfS~ 141 (354)
T PF05631_consen 129 VLGGIATSLLFSA 141 (354)
T ss_pred HHHHHHHHHHHHH
Confidence 9999988754443
No 208
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.08 E-value=0.00015 Score=70.89 Aligned_cols=129 Identities=22% Similarity=0.215 Sum_probs=84.7
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHH-hCCCC--CchhHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLL-FLPDD--PSTGFMR 79 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~ 79 (279)
+.+|++...+..++..+....-+..+++|+++|+ +|++ +.+.+. .++......++.+ ..+.. .......
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~--~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYL--SIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHH--HHHHHHHHHHHHhccCcccccchHHHHH
Confidence 3578999999989888888888899999999998 4666 553222 2221111111111 11111 1112234
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCC---chhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER---SRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++++.+..+|.|..-++. .+...|.++++ .+-+.+.+++...++|+.+++++.+++.+..
T Consensus 89 l~gLaLia~G~GgiKp~v---------saf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCV---------SAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HHHHHHHHhhccccccCc---------hhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 556666677777666655 47788877653 3667888899999999999999999987653
No 209
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.06 E-value=1.8e-05 Score=71.22 Aligned_cols=112 Identities=17% Similarity=0.109 Sum_probs=69.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+++.+.+++..+..++.+++.+++|+++||+|+| +.+........ ....++... .......+......
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 325 (366)
T TIGR00886 254 DQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSFLGVA--MGAFLVVLG-LVSPLSLAVFIVLF 325 (366)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHHHHHH--HHHHHHHhc-CCCcchHHHHHHHH
Confidence 35789999999999999999999999999999999998 55332222211 111111111 11110222333334
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHH
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESIL 133 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g 133 (279)
++.+++.+...... +.++.+..| +.++++.|+.+.+.++|
T Consensus 326 ~~~~~~~g~~~~~~---------~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 326 VALFFFSGAGNGST---------FALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccccchh---------hhcchhhch-hhcccHHHHHHHhccCC
Confidence 44444444333323 577778877 68888999988877664
No 210
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.05 E-value=6.5e-05 Score=68.12 Aligned_cols=119 Identities=16% Similarity=0.170 Sum_probs=86.1
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
.|+++.+++...+.+..+.++|.+++.++..|+... +. +.+...+++.+.....+ ..+ .+.+...++
T Consensus 267 ~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~-----k~--Laf~a~~~ill~~~~~l----~~g--~v~~~~l~~ 333 (422)
T COG0738 267 LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE-----KY--LAFYALIAILLLLAVAL----IGG--VVALYALFL 333 (422)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HH--HHHHHHHHHHHHHHHHH----hcC--hHHHHHHHH
Confidence 789999999999999999999999999999999887 66 23222222222121111 112 256667788
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.|++++...|.+ .+...+..|+ . +...|.......+|+++.|++.|++.|+.
T Consensus 334 ig~F~simfPTI---------fslal~~l~~-~-ts~~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 334 IGLFNSIMFPTI---------FSLALKNLGE-H-TSVGSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred HHHHhHHHHHHH---------HHHHHhccCc-c-ccccceeeeeheecchHHHHHHHHHHHhh
Confidence 899999877766 4888888883 2 33445555677889999999999999987
No 211
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.01 E-value=0.00071 Score=61.70 Aligned_cols=127 Identities=20% Similarity=0.228 Sum_probs=94.3
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGD-TLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|++..+...+......+..+|-...|++.. |.+++ ++ ...++..+.+....+.+.-...+ .+.+...
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~~--a~~G~~~~~~~f~lii~a~~~~~--~~~~~~~ 307 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----RT--AALGCLLGALAFALIILAGPLGS--PWLFRPG 307 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----HH--HHHHHHHHHHHHHHHHHHHhccc--chHHHHH
Confidence 468999999999999999999999999998877 44444 44 33333333333232222222222 2377888
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+++|++.|....... ..+.+...++..|...|.....+.+...++..++|.+.|..
T Consensus 308 ~~l~G~g~G~f~vgal---------s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGAL---------SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHhhhHHHHHHH---------HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999996555443 78899999999999999999999999999999999998854
No 212
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.99 E-value=3.6e-08 Score=91.67 Aligned_cols=125 Identities=18% Similarity=0.270 Sum_probs=73.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHH---HHhCCCCC---chhHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVL---LLFLPDDP---STGFM 78 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~ 78 (279)
..|.+.. -.......+...++.+++.+++||+||| ++++....... .+.... .......+ .....
T Consensus 282 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i 352 (451)
T PF00083_consen 282 NAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMA--ICSLILGIIFFLGVSSSSWWSILSI 352 (451)
T ss_pred ccccccc--cccccccccccccccccccccccccccc-----ccccccccccc--ccccccccccccccccccccccccc
Confidence 3444444 2223344566677778888999999999 66333222111 111111 11111111 11112
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.....+...+..++.+. . +.+..|.+|.+.|+++.++...+..+++.+++.+...+.+..
T Consensus 353 ~~~~l~~~~~~~g~~~~--~--------~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~ 412 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPL--P--------WIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL 412 (451)
T ss_pred eeeeecccccccccccc--c--------cccccccccccccccccccccccccccccccccccccccccc
Confidence 22222333344344433 3 588999999999999999999999999999988888777654
No 213
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.97 E-value=0.00039 Score=64.27 Aligned_cols=126 Identities=12% Similarity=0.005 Sum_probs=72.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHH-HHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQ-ISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.+|+++.+.++.......+..+++.+.+.+.+|..++ +.+... ....++..+........ +...+...+.
T Consensus 247 ~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~-----~~~~~~~~~~~ig~~l~~~~~~~~---~~~~~~~~~~ 318 (413)
T PRK15403 247 DAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEP-----RFIWRAVPIQLVGLALLIVGNLLW---PHVWLWSVLG 318 (413)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch-----hHHHHHHHHHHHHHHHHHHHHHHc---cccHHHHHHH
Confidence 34689999999998888888888888887766444333 221111 11111111111111111 1112233455
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
+++.+++.+...+..+ . .+..-....+|++.|+.+.....+..+++.+.|++.++
T Consensus 319 ~~l~~~G~~~~~p~~~---------~-~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 319 TSLYAFGIGLIFPTLF---------R-FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHHhHHHH---------H-HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6666666665444221 1 12122233478999999999988889999999988664
No 214
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.94 E-value=5.7e-06 Score=76.02 Aligned_cols=127 Identities=19% Similarity=0.184 Sum_probs=69.5
Q ss_pred cee-ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHH-HHHHHHHHHHHHhCCCCCchhHHH
Q 037387 2 WFE-LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISF-GSGIPIAAVLLLFLPDDPSTGFMR 79 (279)
Q Consensus 2 ~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 79 (279)
|++ ..|+|..++|.++++..+..++.+++.|.++||+|.| +.++...... .+..|+.......+-.. + .
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~k----K~Ll~~i~~l~~l~~pff~~v~~pll~~-n----~ 103 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLK----KHLLWFIAILLLLFGPFFIYVFGPLLQS-N----F 103 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTC----SHHHHHHHHHHHTCHHHHHHTHHHHHHT-T-----
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----H
Confidence 555 4899999999999999999999999999999999987 3442222111 11122221111000011 1 1
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccCcccchhcccCC---CchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 80 GLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPE---RSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 80 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
.++..+.|+..+....+. .=+.|..-. +..+.=+|=.+.++++|.+++..++|.+.+.
T Consensus 104 ~lg~iig~i~l~~~f~~~----------~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 104 WLGAIIGGIYLGLVFNAG----------VPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp HHHHHHTTTTTTTTTTTH----------HHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccc----------chHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 112222222222111111 111232211 2233457778889999999999999999873
No 215
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.87 E-value=0.00097 Score=63.24 Aligned_cols=122 Identities=11% Similarity=-0.003 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHH---HHHHHHHHH-HhCC-CCCchhHHHHHHHHHHHH
Q 037387 14 AFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGS---GIPIAAVLL-LFLP-DDPSTGFMRGLVLVIMGL 88 (279)
Q Consensus 14 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~~~~~~~~~i~g~ 88 (279)
+++.+++.+..++.+++.+++.||+++|..+........+++.+ +........ .... ......++++...++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 44555566777788888999999999983211111111222222 111111111 1111 112223456677888899
Q ss_pred HhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 89 CISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
+.+...+.. ..++.+..|++.++.++|+......+|+.++..+....
T Consensus 392 Ge~~~~~~g---------~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 392 GELFISALG---------LAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHhHHH---------HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888666655 38888999999999999999999888888887766654
No 216
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.85 E-value=1.2e-05 Score=73.90 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=64.7
Q ss_pred HHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCC--CchhHHHHHHHHHHHHHhhhhhhhhccccccc
Q 037387 27 GGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDD--PSTGFMRGLVLVIMGLCISWNPIAANKYHLTT 104 (279)
Q Consensus 27 g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 104 (279)
|-.+...++|++||+ ++.+..+.+. .+ +.+.+..+.+ .... .+++...+..++..+.+....
T Consensus 364 Gyw~tv~~id~iGRk-----~iq~~GF~~~--~i--~~~~~~~~y~~~~~~~-Gf~v~y~l~~ff~NFGPn~tt------ 427 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRK-----YIQLMGFFIM--TI--FFFVIAGPYNQLENTI-GFVVLYSLTFFFGNFGPNATT------ 427 (538)
T ss_pred ceeEEEEEeehhhhH-----HHHHhhHHHH--HH--HHHHHcCCcccccccC-ceeehHHHHHHHHhcCCCcee------
Confidence 566667889999999 6633332221 11 2222222222 1111 223333333333333333333
Q ss_pred CcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 105 GYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 105 ~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
..+.+|.+|.+.|+++.|+..+.+.+|+.++.....++.++
T Consensus 428 --fivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 428 --FIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred --EEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 58889999999999999999999999999999999988884
No 217
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00015 Score=68.01 Aligned_cols=106 Identities=16% Similarity=0.102 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhhhc
Q 037387 19 LFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIAAN 98 (279)
Q Consensus 19 ~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 98 (279)
..++..++.++..|.++||+||| ..+...... ..++.....+.. + ++++..-+.|...... ...
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~-~~l~~~~~~~~~-------~-~~~~~~~l~g~~~~~~-s~~- 133 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRK-----VVLLLPLFG-TILPALCLLFQG-------Y-WFFLLLGLSGGFSAIF-SVG- 133 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHH-HHHhHHHHHHHH-------H-HHhhhcccccchhhhh-hhh-
Confidence 34678888999999999999999 553332221 112222222211 1 2222111222222211 222
Q ss_pred ccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 99 KYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 99 ~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.++++|+...+.|...+++.+.....+..++|.+.+.+....
T Consensus 134 --------~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 134 --------FAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred --------hhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 499999999999999999999999999999999999998864
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.80 E-value=0.0014 Score=61.84 Aligned_cols=125 Identities=9% Similarity=0.006 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH--hCCC--CCchhHHHHHHHHHHHH
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLL--FLPD--DPSTGFMRGLVLVIMGL 88 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~i~g~ 88 (279)
.+++.+++.+..++.+++..++-.|+.||.++.....-..+++++.........+ .... .....+++++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6678888888888888777666666666522211221112222221111111111 1111 12234467778888899
Q ss_pred HhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 89 CISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+-.+..|.. ..++.+..|++.|++.+|+......+|..+++.+.....+
T Consensus 394 ge~~~~p~~---------~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 394 GELMISPLG---------LSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHhHHH---------HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888777776 5999999999999999999998888888888777776654
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.79 E-value=9.9e-05 Score=69.16 Aligned_cols=125 Identities=13% Similarity=0.107 Sum_probs=84.9
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHH
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLV 82 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+++.|..+...|........+-++.-++.+++..|+|+- +++.+.++... + =.+.+...+++ |+++..
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-----~v~~lgLa~~~-~---Rf~~~S~L~n~---W~vLPi 465 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-----NVMYLGLACNV-G---RFLYYSYLQNP---WMVLPI 465 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc-----ceeeehhhHHH-H---HHHHHHHhcCc---hheeeH
Confidence 344555555556555555666677777889999999997 66333322221 1 11222222333 266667
Q ss_pred HHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHH-HHHHHHhhHHHHHHHHHHHh
Q 037387 83 LVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRS-FESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 83 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~-~~~~g~~i~~~~~g~l~~~~ 148 (279)
=++.|...+....++. +|++...||+.|+++.++... ...+|-.+|++++|.+...+
T Consensus 466 eilqgit~aliWaa~~---------sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 466 EILQGITHALIWAAII---------SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred HHHHHHHHHHHHHHHH---------HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 7888998886666664 999999999999999999876 45577789999999998865
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.76 E-value=0.0005 Score=63.36 Aligned_cols=122 Identities=16% Similarity=0.213 Sum_probs=84.5
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVI 85 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 85 (279)
.+.++...|.+.+...+.-++.-.+.+++.+|+|.| +.+++.. .+..+= +.... ...+. +.+.+.-.+
T Consensus 254 ~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~Lllag-~i~~iR---i~~~~--~~~~~-~~i~~~klL 321 (412)
T PF01306_consen 254 AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLLLLAG-VIMAIR---IIGSG--FATNP-WVISLIKLL 321 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHHHHH-HHHHHH---HHHHH--T--SH-HHHHHHHHH
T ss_pred cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHHHHHH-HHHHHH---HHHHh--hhcch-HHHHHHHHH
Confidence 344556788999999999999999999999999999 6633322 211111 11111 12222 256666677
Q ss_pred HHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHH-HHHHHHHHhhHHHHHHHHHHHh
Q 037387 86 MGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALD-RSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~-~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
-++.....-.+. .-|+++.+|++..++.+.+. +....++..+.+.+.|.+.|+.
T Consensus 322 H~~e~~l~lva~---------fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 322 HALEFPLLLVAA---------FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp HHHHHHHHHHHH---------HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---------HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc
Confidence 777776555555 48999999999998898885 5677888899999999999987
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00026 Score=66.62 Aligned_cols=131 Identities=20% Similarity=0.281 Sum_probs=76.8
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|++..+.|++.++..+...+..+++|+++||+-+|.......+.+.-+.....+...++.+.+...... ...+.+
T Consensus 287 ~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~--~~a~~~ 364 (466)
T KOG2532|consen 287 EVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR--LLAVIL 364 (466)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc--hHHHHH
Confidence 368999999999999999999999999999999997752221111112222222222222222222121121 122222
Q ss_pred HHHHHHhh-hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 84 VIMGLCIS-WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 84 ~i~g~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.++.+.. ...... ..-..+. .++.-+..+|+.+.+..+.+.++|.++|.+..
T Consensus 365 l~~~~~~~g~~~~Gf---------~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 365 LTIAIGLSGFNISGF---------YKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred HHHHHHHcccchhhh---------Hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 22222222 222211 1222333 45667779999999999999999999998874
No 222
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.62 E-value=0.0031 Score=60.89 Aligned_cols=117 Identities=18% Similarity=0.159 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhh
Q 037387 12 STAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCIS 91 (279)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 91 (279)
..+++....+++..+|+++.|++..+++|- |..++ ++..+...+...+...-+.... ......++.|++.+
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-----Kw~li-~~~~~~ta~~Gama~~~~~n~~---~~i~~~~l~g~giG 420 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHI-----KWQLI-FGSVLMTAFCGAMAAVRPDNKN---AAIAFLVLAGFGIG 420 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccch-----hHHHH-HHHHHHHHHHHHHHHccCCCcc---hHHHHHHHHHHhHH
Confidence 467777888889999999999999888764 33222 2222222121222222223322 33455677888888
Q ss_pred hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 92 WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+..... ....+-.+|++.-+++.|+..+++.+|++++..+...+..
T Consensus 421 ~~~~~~---------~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 421 GILVPA---------IVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHH---------HHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 655544 3666778999999999999999999999999888876643
No 223
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.57 E-value=0.00024 Score=49.72 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=38.4
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
|+++.|+|+.++|.+.++..+...++++++|+++||++++
T Consensus 26 ~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 26 YLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 6778999999999999999999999999999999999998
No 224
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.57 E-value=0.0015 Score=60.90 Aligned_cols=138 Identities=18% Similarity=0.197 Sum_probs=87.7
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGL 81 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+.+++|+++.+...+.++..+...+ .++.|.++|-+.-+..++++. +.++..++... ...+...+..........+
T Consensus 16 l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y--~~i~~~~~~~~-~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 16 LKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPY--MIIGWLLGAVS-ALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHH--HHHHHHHHHHH-HHHHHhcccccchhhhHHH
Confidence 3457999999999999988888776 688899999975211111233 22233332211 2222223332222224455
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccchhcccC--CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP--ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.+++..++....-.+. -+++.|... ++.|+...+....+..+|+.++..+.|.+.+.. +++.
T Consensus 92 ~l~la~~g~a~~DV~a---------Da~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~ 155 (433)
T PF03092_consen 92 LLFLASFGYAFADVAA---------DALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQG 155 (433)
T ss_pred HHHHHHHHHHHHHHhh---------hHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeE
Confidence 5566666666665555 377777752 233777888888899999999999999998865 5554
No 225
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.54 E-value=0.0058 Score=57.76 Aligned_cols=114 Identities=18% Similarity=0.227 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISW 92 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 92 (279)
.++..++..+...+..++.|-++|+-++| +.++...+. ++....+ .+.+. .+..++...+..++.-++.+.
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~R-----k~~l~~~~~-~~~~~~~-~l~~v--~~~~~~~~~~l~iia~v~~~~ 142 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRR-----KRFLLIFTL-LGVLATA-LLWFV--SPGQWWLALVLFIIANVGYEA 142 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccc-----hHHHHHHHH-HHHHHHH-HHHHh--CcchHHHHHHHHHHHHHHHHH
Confidence 45667788888888899999999999988 443332222 2222222 22222 222222333333444445554
Q ss_pred hhhhhcccccccCcccchhcccCCCch--------------------------hhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 93 NPIAANKYHLTTGYSPIFAEIVPERSR--------------------------TTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~e~~p~~~r--------------------------~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
.....| ++..|+.+++.+ ++.++.....+++|+.+.-.+.-.+
T Consensus 143 ~~vfyn---------a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~ 211 (477)
T PF11700_consen 143 SNVFYN---------AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL 211 (477)
T ss_pred HHHHHH---------HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444 999999998888 8999999889998887665554444
No 226
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.54 E-value=0.0009 Score=63.34 Aligned_cols=33 Identities=27% Similarity=0.608 Sum_probs=31.0
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTL 38 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 38 (279)
.|+|..++..+.+.+.++++++.+++|+++||+
T Consensus 304 ~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 304 GGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred CCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 569999999999999999999999999999994
No 227
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.50 E-value=0.007 Score=57.53 Aligned_cols=120 Identities=11% Similarity=-0.004 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCC--CCCchhHHHHHHHHHHHHHh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLP--DDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~g~~~ 90 (279)
.+++.++..+..++..++.+++-+|+++|.+...++.+..+...++..+..... ... ......++..+..++.|++.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~-~~~~~~~~vs~~~~~~~~~l~~~ge 396 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGA-KFANDAGIVSVNWLIASYGLQSIGE 396 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCccCHHHHHHHHHHHHHHH
Confidence 566677778777788888777777777663322333222222222221111111 111 11112236677788889988
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
....|.. ..++.+..|++.||+++|+..... ++++.+.|.+..
T Consensus 397 ~~~~p~g---------~s~~~~~aP~~~rg~~~g~~~l~~----a~g~~~~g~~~~ 439 (500)
T PRK09584 397 LMISGLG---------LAMVAQLVPQRLMGFIMGSWFLTT----AGAALIAGYVAN 439 (500)
T ss_pred HHHhHHH---------HHHHHHhCcHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 8777766 488999999999999999655444 445555555554
No 228
>PRK03612 spermidine synthase; Provisional
Probab=97.46 E-value=0.0059 Score=58.33 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=70.8
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGS-GIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.+|-+....+.+.+++.++..+|+.+++++.++.-++ .. ...+...+ +.....++....+.............
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-----~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-----FV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677788889999999999999999888876443333 21 11111111 11011111111111111111233445
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.++.+|...|... .+..+. ..+.-+...|-.++...+|+.+|+.+.+++.-..
T Consensus 118 ~~~~~l~G~~~Pl~~---------~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 118 LLIGLLIGMEIPLLM---------RILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHH---------HHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 566777776656442 222222 1222345678888899999999999999876533
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.35 E-value=0.0041 Score=52.83 Aligned_cols=118 Identities=21% Similarity=0.290 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 90 (279)
...++..+...+...++.++.|++.||+||| +.+........ ........... ...+.+.+.++..|++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~g~~~ 108 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFL---LGTLLLALAPN--VGLALLLILRLLQGLGG 108 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHH---HHHHHHHhCcc--chHHHHHHHHHHHHhhh
Confidence 4678889999999999999999999999988 55333322211 11111111111 22335566666678877
Q ss_pred hhhhhhhcccccccCcccchhcccCC-CchhhHHHHHHH-HHHHHHhhHHHHHHHHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPE-RSRTTIYALDRS-FESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~a~~~~~~-~~~~g~~i~~~~~g~l~~~ 147 (279)
+...+.. ..++.+..|+ +.|+...+.... ...++..++|.+.+.+...
T Consensus 109 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 109 GGLLPVA---------SALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHH---------HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7555555 4889999988 677878888777 4667777788677666653
No 230
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.06 E-value=0.019 Score=54.69 Aligned_cols=112 Identities=18% Similarity=0.101 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIA 96 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 96 (279)
....+.....+....+...|++||| ... ..+..+......+.. ..+..... ++..+...+..++.+.....
T Consensus 356 ~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~--~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 426 (521)
T KOG0255|consen 356 FTLSGLVELPAYFRNGLLLPEFGRR-----PPL--FLSLFLAGIGLLLFG-WLPDDLGG-WLHWILPLLGKFFIGSAFNL 426 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCcH-----HHH--HHHHHHHHHHHHHHH-Hhhccchh-HHHHHHHHHHHHHHHHHHHH
Confidence 3344445666666778999999998 552 222222221112222 22222221 12222222223333333333
Q ss_pred hcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 97 ANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 97 ~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
. ..+..|..|...|..+.+.......+++.++|.+.-....
T Consensus 427 ~---------~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 427 I---------FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred H---------HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 4888999999999999999999999999988888765544
No 231
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.99 E-value=0.0022 Score=58.02 Aligned_cols=126 Identities=16% Similarity=0.088 Sum_probs=84.2
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+++.+.|.+++..++.+.+.++.-....+|.... ..-. ....+.++.|... .+.....+. ++....
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~---~~a~--l~~~l~~~vP~~l--lls~~~~~~---~l~~~s 359 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN---IKAV--LLFSLLLIVPAFL--LLSLARTPV---VLYLGS 359 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccc---hhhH--HHHHHHHHHHHHH--HHhccccch---hhhHHH
Confidence 46899999999988877777666655555555554311 1122 2233333333322 222222222 566666
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+..++.....++. ..++....|+++||++.|+..+...++-++||.+.|.+..+.
T Consensus 360 ~l~sf~~A~~vt~L---------t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 360 TLKSFSTASVVTCL---------TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHHHhhHHH---------HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 66677666555665 488899999999999999999999999999999999887654
No 232
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.99 E-value=0.011 Score=54.77 Aligned_cols=123 Identities=16% Similarity=0.148 Sum_probs=74.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHH-HHHHHHHHHHHHHHHHHHh-CCCCCchhH--HHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRII-LAQISFGSGIPIAAVLLLF-LPDDPSTGF--MRGL 81 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~ 81 (279)
+| +...+-|+..++++.++.-.+.+-|+.|++|-| ... +.....+++. .+=... .+..+...+ +...
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa---~Ir~iss~p~v~~~f~~~l~~~ 145 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGA---WIRLISSLPFVPPLFRRPLTHT 145 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHH---HHhhhccCccccccchhhhhHH
Confidence 34 566677889999999999999999999999999 442 2222222211 111111 111122222 3333
Q ss_pred HHHHHHHHhhhhhhhhcccccccCcccch-hcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 82 VLVIMGLCISWNPIAANKYHLTTGYSPIF-AEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 82 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
+-.+.+...-+... ++.-+ .-.+|+++|+.|.++..+.+.+|.+++..+...+..+
T Consensus 146 Gq~iaa~Aq~Fim~----------lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 146 GQSIAAAAQPFILG----------LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hHHHHHHhhhHhhc----------cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 33444444332211 12333 4468999999999998888888888887777776553
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.96 E-value=0.048 Score=51.58 Aligned_cols=119 Identities=13% Similarity=-0.013 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHH-HHHHHHhC-CC------------CCch--hHH
Q 037387 15 FLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPI-AAVLLLFL-PD------------DPST--GFM 78 (279)
Q Consensus 15 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~------------~~~~--~~~ 78 (279)
+....+.+...+.+++..++.+|+|+| +++ ..++.++.... ....+... +. .+.. .+.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~----k~~--~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAG----KRL--WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKAS 382 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc----hhH--HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHH
Confidence 334445555567777788888888853 144 22222221111 11111111 00 0111 134
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCC--CchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 79 RGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPE--RSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 79 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.++.+.+.|+....... +. ++++++..++ +..|..+|+.|.+..+...+.....|.+.+..
T Consensus 383 ~l~~~~~~Gi~~A~~~s-iP--------fal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~ 445 (477)
T TIGR01301 383 ALIVFAILGIPLAITYS-IP--------FALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLF 445 (477)
T ss_pred HHHHHHHhhHHHHHHHH-Hh--------HHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55555566666552211 13 5888888885 45588999999999999998888888855543
No 234
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.86 E-value=0.023 Score=52.99 Aligned_cols=120 Identities=18% Similarity=0.276 Sum_probs=75.3
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHH--HHHHHHHhCCCCC-c--hh
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIP--IAAVLLLFLPDDP-S--TG 76 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~--~~ 76 (279)
|....|+++...|.+-+...+.++.|.++..++.+|+|.. |. ...+...-.. ..++..+..+.++ . ..
T Consensus 284 yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv-----r~--G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 284 YLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV-----RA--GLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----hh--HHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 4455699999999999999999999999999999999986 44 2222221111 1122222333332 1 11
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhH
Q 037387 77 FMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIA 137 (279)
Q Consensus 77 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~ 137 (279)
..++.+..+--+|.=..-.+. ..+++|.+|+++|++..|+.++.+++.-.+.
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~---------~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAV---------TQIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHH---------HHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 122222222222221222333 4889999999999999999998888775544
No 235
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.85 E-value=0.0098 Score=54.97 Aligned_cols=128 Identities=17% Similarity=0.097 Sum_probs=81.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..|.+...+|+......+++++++++.|.+.||...- +..+ ... ........+.+. .........++++....
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f----k~~~-~v~-~~~~~v~~~~l~-~~t~~~~~~viv~~t~~ 367 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF----KLTT-LVL-YLFALVGTLMLL-TCTLFLGDSVIVFTTCG 367 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH----HHHH-HHH-HHHHHHHHHHHH-HhhccCCceEehhhhHH
Confidence 3466667889999999999999999999999997543 1221 111 111111111111 11111222225666677
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++|++.....|.. .-+..|..-|...++..|+.+...++-+.+-..+.+...+..
T Consensus 368 ~~g~~~~~~~Pig---------~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 368 LLGFFGTGYLPIG---------FELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred HHHHhhcCCCCcc---------eeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 7787777665644 377788765555566888888888888888888888877654
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.80 E-value=0.041 Score=43.88 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIA 96 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 96 (279)
.++......+++++.+.+.+++|.| +.+++...... + .......+ ..+.++..-.+.|++.+....+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~---~-y~~~~~~~----~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYA---I-YIASFFYP----NSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHH---H-HHHHHHhh----hHHHHHHHHHHHhhhhHHhhHh
Confidence 4556677788889999999999999 65333221111 1 11111111 1236677778889988855555
Q ss_pred hcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHH
Q 037387 97 ANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLL 144 (279)
Q Consensus 97 ~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l 144 (279)
. ..++.+...++.+++-.++...+...+..+|..+.-.+
T Consensus 110 q---------g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 110 Q---------GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred h---------hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 38888999999999999998888887766666655444
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.72 E-value=0.0078 Score=53.54 Aligned_cols=64 Identities=20% Similarity=0.236 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037387 75 TGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHH 147 (279)
Q Consensus 75 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~ 147 (279)
.+..+++..++.|.|.+...+..| ++++++.|++.+++..++...+..+|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n---------~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~ 72 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAAN---------PYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILS 72 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHH---------HHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 344788889999999998888886 9999999999999999999999999999999999998853
No 238
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.62 E-value=0.0035 Score=57.11 Aligned_cols=132 Identities=14% Similarity=0.061 Sum_probs=79.2
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+..+.++.|+.+....+.+.+++.+.|.+.||++.- +++....++++. ......++...+. ..+.+-.+
T Consensus 300 ~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~-----~wl~~~~gl~~~----G~~~~~iP~~~~~-~~L~vp~~ 369 (464)
T KOG3764|consen 300 TMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL-----RWLLSLGGLATV----GVSSGPIPFATSI-AQLWVPNF 369 (464)
T ss_pred hccCCCcceeeeecccccchhccCchHHHHHHhcCch-----hHHHHHHHHHHH----HHHhchhHhhhhH-HHHhhhhH
Confidence 4555566888888888999999999999999999965 432232222221 1222222222221 13333333
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCC---chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPER---SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
..+++.+....... - ...+..|....+ .-|.++++.....+++.++||.++|.+.+.. |++|
T Consensus 370 ~l~~~i~~~dasl~----P--~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~w 434 (464)
T KOG3764|consen 370 GLGFGIGLADASLI----P--TLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEW 434 (464)
T ss_pred HHHHHHHHHHHHHh----h--hhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHH
Confidence 34444432222211 0 012333333333 5678999999999999999999999999876 6665
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.60 E-value=0.26 Score=46.83 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhc--CCCcc-hHHHHHHHHHHHHHHHHHHHHhCCC-CCchhHHHHHHHHHHHH
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKR--LPNSG-RIILAQISFGSGIPIAAVLLLFLPD-DPSTGFMRGLVLVIMGL 88 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~g~ 88 (279)
.+++.+++.+..++.+++.+++=.|..|| -++.. +.-+..+.+.++..+..+....... .....+++++..++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 56777888888888888888876776433 23322 2211222222222111111111111 11223356666667777
Q ss_pred HhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 89 CISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
+--...|.. .+.+++..|++.+++.+|+.... ++++++.+.|++....
T Consensus 390 gEl~~sPvg---------ls~~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVA---------MSQITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHH---------HHHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 666555655 38899999999999888886321 3356666777766543
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.57 E-value=0.035 Score=51.04 Aligned_cols=113 Identities=13% Similarity=0.113 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCI 90 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 90 (279)
...+...++.++...+-+++-|-++|+.|+| ++. ..+...+++...+.+.+. +.. +.++..++.+.+...+.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~R----k~~--~~~f~~i~i~~~~~L~~i-~~~-s~~~~~l~~~il~~i~~ 129 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPR----KKF--FGFFTAIGIISTFLLWFI-PPG-SYLLLLLLFLILASIGF 129 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCc----chH--HHHHHHHHHHHHHHHHHh-CCC-chHHHHHHHHHHHHHhc
Confidence 3456667777888888889999999999998 444 333333434333333322 222 33334455555556665
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~ 140 (279)
......- .+++.++.+++.-++.+++......+|+.+.-.+
T Consensus 130 ~~s~Vfy---------ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 130 EFSNVFY---------DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred chhheeh---------hhHhhhhcCccccCcccccccccccccchHHHHH
Confidence 5444433 4899999999999999888888888887654333
No 241
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.54 E-value=0.015 Score=54.38 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=38.4
Q ss_pred cchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 108 PIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 108 ~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+++++.|+...|+.+|+..++.|+|..++..++..+.+..
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 78899999999999999999999999999999999988865
No 242
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.51 E-value=0.068 Score=52.43 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=35.0
Q ss_pred cchhcccCCCchhhHHHHHHHHHHHHH-hhHHHHHHHHHHHh
Q 037387 108 PIFAEIVPERSRTTIYALDRSFESILS-SIAPPVVGLLAHHV 148 (279)
Q Consensus 108 ~~~~e~~p~~~r~~a~~~~~~~~~~g~-~i~~~~~g~l~~~~ 148 (279)
..+...+|+++|+.+.|+...+..+.+ .-+|++.|+++|..
T Consensus 541 ~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 541 MVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred eEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 666778999999999999998777666 56999999999864
No 243
>PTZ00207 hypothetical protein; Provisional
Probab=96.45 E-value=0.13 Score=49.85 Aligned_cols=116 Identities=16% Similarity=0.085 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCC--CcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhh
Q 037387 16 LLTLFTIAGSLGGLFGGWMGDTLAKRLP--NSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWN 93 (279)
Q Consensus 16 ~~~~~~~~~~~g~~~~g~l~dr~grr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 93 (279)
+.++.+++..+|.+.+|++...+-+|.+ ...+.+.+.+.... .....++++..+ .. .+.+..++.|++.|..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~-~~~~lll~~~~p--~~---~L~~~~~lvg~~~G~~ 469 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVC-IITMLTLFLTLP--KA---ALPLPYFIAAFANGFM 469 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHH-HHHHHHHHHHCC--cc---HhHHHHHHHHHHhhHh
Confidence 7888999999999999998843333311 12233223332221 111122222222 12 5677788889999966
Q ss_pred hhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhh-HHHHHHHHHHH
Q 037387 94 PIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSI-APPVVGLLAHH 147 (279)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i-~~~~~g~l~~~ 147 (279)
.... ...++|++. +.-|+-+-+.....-+|+.+ .-.+.|.+.|+
T Consensus 470 ~~~~---------~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 470 AATI---------ALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQ 514 (591)
T ss_pred HHHH---------HHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 6555 488999998 76665555544444444432 24445555553
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.33 E-value=0.00061 Score=65.31 Aligned_cols=129 Identities=9% Similarity=0.000 Sum_probs=2.0
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHH---HhCC-C--------
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLL---LFLP-D-------- 71 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-------- 71 (279)
+.++++..++|++.+.+-++..+..++..++.+|-.|- |+ +..+.++......+.. +..+ .
T Consensus 31 rRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rw--ig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 31 RRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RW--IGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ce--eeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 46899999999999999999999999999999886554 44 2322222111111100 0000 0
Q ss_pred ----------C-----------------------CchhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCc
Q 037387 72 ----------D-----------------------PSTGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERS 118 (279)
Q Consensus 72 ----------~-----------------------~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 118 (279)
. ....++++++-++.|+|.....+.. .+|+=|.++++.
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG---------~tYiDDnv~~~~ 174 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG---------ITYIDDNVSKKN 174 (539)
T ss_dssp ------------------------------------------------SSS-----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce---------eeeecccccccc
Confidence 0 0012344555566666655444433 599999999999
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 119 RTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 119 r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
-....|+..+...+|.++|-.++|.+...+
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~y 204 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIY 204 (539)
T ss_dssp ------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhce
Confidence 998899999888888888888888776644
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.00 E-value=0.17 Score=47.65 Aligned_cols=122 Identities=16% Similarity=0.212 Sum_probs=86.0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGG-WMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.+|++..+.+.+.+..++...+++++.. .+...+|-| ++ +..++.. ......+..+.+..+ ......
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~--i~lGl~~--~~~~~~~~af~~~~w---~~~~~~ 338 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RL--ISLGLLS--EFLQLLLFAFATETW---MMFAAG 338 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hH--hhHHHHH--HHHHHHHHHHhccch---hhhHHH
Confidence 5899999999999999999999999887 778888888 54 2222221 111222323333333 444444
Q ss_pred HHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 84 VIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 84 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++.++.. ...++. .+.++-.++++.+|+++++...+..+.+.++|.+.+.+...+
T Consensus 339 v~~~~~~-~~~pa~---------~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 339 VVVALAG-IVFPAI---------RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHhhc-chhHHH---------HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 4444433 333444 588899999999999999999999999999999999887654
No 246
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.99 E-value=0.83 Score=43.18 Aligned_cols=125 Identities=14% Similarity=0.011 Sum_probs=76.3
Q ss_pred ChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCc-------------
Q 037387 9 SHGSTAFLLTLFTIAGSLG-GLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPS------------- 74 (279)
Q Consensus 9 s~~~~~~~~~~~~~~~~~g-~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 74 (279)
++....++.+...+...+. .++-+++++|++|+ +++.......+...+.+. +...|....
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~-----~lf~~~~~~F~~~f~lF~-~vl~p~~~~~~p~~~~~~~~~~ 114 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE-----ALFYTVISPFLGFFALFA-FVIYPLSDLLHPTALADKLLSL 114 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH-----HhHHHHHHHHHHHHHHHH-HHHhcchhhcCCcHHHHHHHhh
Confidence 4467788887776666665 88899999999999 775444333332221111 111111100
Q ss_pred ----h--------hHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 75 ----T--------GFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 75 ----~--------~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
. .|...+..+...+.........- |.++.|++..++-.+-+++.....++|..+++.+..
T Consensus 115 ~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lF--------W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 115 LPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLF--------WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred cchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--------HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11111222222222222222122 899999999999999999999999999999998888
Q ss_pred HHHHH
Q 037387 143 LLAHH 147 (279)
Q Consensus 143 ~l~~~ 147 (279)
++.+.
T Consensus 187 ~~~~~ 191 (472)
T TIGR00769 187 YFSKL 191 (472)
T ss_pred HHHHh
Confidence 87753
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.84 E-value=0.69 Score=43.47 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
+..+.-++.|++-....... +.++.... ++.|..++++..+-..+++.++-....
T Consensus 355 ~~~ii~~l~G~~D~~~~t~~---------~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 355 LALIIGFLLGFGDACFNTQR---------YVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHhhHHHHHHHHH---------HHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 55555666676665333323 46677777 677778999988888877765544443
No 248
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.82 E-value=0.0039 Score=54.55 Aligned_cols=125 Identities=12% Similarity=0.090 Sum_probs=85.3
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 6 SGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDT-LAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 6 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
..++..+..++.+.+..-.++-++++||+.|| +|.| .. .+..++++++ .-+.+.........|.....+|
T Consensus 74 ~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir-----~g-tii~~~fv~~---GqliFa~Ggi~~aFw~M~~GRF 144 (459)
T KOG4686|consen 74 SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIR-----LG-TIILCIFVFL---GQLIFAAGGISHAFWTMLAGRF 144 (459)
T ss_pred cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhh-----HH-HHHHHHHHHH---HHHHHHhchHHHHHHHHHhhhe
Confidence 34445567778888888899999999999998 4555 22 1222222211 1111111222345668889999
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++|++.-....+-| .|..-.+.-+.-..++|+..+...+|+.+--.+.+++.+..
T Consensus 145 ~FGIGgESlAVaQN---------~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 145 LFGIGGESLAVAQN---------KYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred eeccCchhhhhhhc---------ceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 99988655545555 77778888888899999999999999988777777777654
No 249
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.71 E-value=0.65 Score=43.48 Aligned_cols=79 Identities=16% Similarity=0.113 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC-chhHHHHHHHHHHHHHhhhhh
Q 037387 16 LLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP-STGFMRGLVLVIMGLCISWNP 94 (279)
Q Consensus 16 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~ 94 (279)
+.+.+.+...+.+++...+.-++.+|.+.+.|+....+...+.. +....+.....+. ...+..++..++.|++.+...
T Consensus 46 ~~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~-~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q 124 (437)
T TIGR00939 46 FNTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVV-ILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQ 124 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHH-HHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhc
Confidence 44555666666666666666665555444456533222111111 1111111111122 223345555666777766554
Q ss_pred h
Q 037387 95 I 95 (279)
Q Consensus 95 ~ 95 (279)
.
T Consensus 125 ~ 125 (437)
T TIGR00939 125 G 125 (437)
T ss_pred c
Confidence 4
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.45 E-value=0.025 Score=53.51 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=38.1
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
|++++|+++.+.|.+++..-+..+++.+++|+++||+-+|
T Consensus 37 y~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~ 76 (618)
T KOG3762|consen 37 YFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKR 76 (618)
T ss_pred HHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhc
Confidence 6778999999999999999999999999999999999887
No 251
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.31 E-value=0.11 Score=36.93 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=35.0
Q ss_pred eeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 3 FELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 3 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
.++.++|..+.+++.+.+.+++.+|++...++.++..++
T Consensus 19 ~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 19 QADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 356799999999999999999999999999999986655
No 252
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.31 E-value=0.88 Score=42.12 Aligned_cols=119 Identities=17% Similarity=0.067 Sum_probs=76.8
Q ss_pred cCCChhHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 037387 6 SGFSHGSTA-FLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLV 84 (279)
Q Consensus 6 ~g~s~~~~~-~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
.+++..+.. -++-...-.++...++...+.|.++.| +++++.....+... .++. . ..+ ....-+.-+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~--~lll-~---~~s-v~~mq~~q~ 102 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITW--LLLL-F---GTS-VLAMQLMQF 102 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHH--HHHH-H---HCc-HHHHHHHHH
Confidence 677877765 445555667777888889999999999 77444433322221 1111 1 122 224555566
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
+.|++...-. +. ++|+--.+|++.--++.+..+....+|..++..++-.+..
T Consensus 103 ~yg~~~a~ev-ay---------~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 103 FYGLATAAEV-AY---------YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHH-HH---------HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677665432 22 5777788888888888888888888887777776666654
No 253
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.11 E-value=1.5 Score=40.99 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=26.1
Q ss_pred CCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 115 PERSRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 115 p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
++...++.++..+-+--+...++|.+.|.+....
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~ 176 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA 176 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3455666777777777778899999999998754
No 254
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.51 E-value=0.078 Score=46.22 Aligned_cols=81 Identities=19% Similarity=0.137 Sum_probs=52.5
Q ss_pred eccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 037387 4 ELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVL 83 (279)
Q Consensus 4 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
+.+|+...++|.++.......++.+.+.|-++||.||| +... ..++.. .+......++. +.++++++
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRK-----racv---tycitY----iLsCiTKhSpq-YkVLmVGR 131 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRK-----RACV---TYCITY----ILSCITKHSPQ-YKVLMVGR 131 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccc-----ccee---eehHHH----HHHHHhhcCCc-eEEEeehh
Confidence 46789999999888877777788888899999999999 5421 111111 11111112332 33778888
Q ss_pred HHHHHHhhhhhhhh
Q 037387 84 VIMGLCISWNPIAA 97 (279)
Q Consensus 84 ~i~g~~~~~~~~~~ 97 (279)
++-|+..+....+.
T Consensus 132 ~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 132 VLGGIATSLLFSAF 145 (454)
T ss_pred hhhhHHHHHHHHHH
Confidence 88888877544443
No 255
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.33 E-value=0.18 Score=49.68 Aligned_cols=131 Identities=12% Similarity=0.111 Sum_probs=85.7
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHH---HHHHHHHHHHhC------------
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGS---GIPIAAVLLLFL------------ 69 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------------ 69 (279)
.++++..+.|++.+.+-++..+...+..++..|..|- ++ +..+..+ +..+.++-.+..
T Consensus 126 RF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~--Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 126 RFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RW--IGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ce--eeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 5788899999999999999999999999999998775 44 2222211 111111110000
Q ss_pred ----C---------------------C-----CCc--hhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCC
Q 037387 70 ----P---------------------D-----DPS--TGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER 117 (279)
Q Consensus 70 ----~---------------------~-----~~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 117 (279)
+ . ..+ .+.++++..++.|+|.....+.. -+|+=|.+.++
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlG---------isYiDDnvk~~ 269 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLG---------ISYIDDNVKKK 269 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCC---------Ccccccccccc
Confidence 0 0 000 12244455566666655333333 48888888888
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCC
Q 037387 118 SRTTIYALDRSFESILSSIAPPVVGLLAHHVYGY 151 (279)
Q Consensus 118 ~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~ 151 (279)
.-..-.|+..++..+|-++|-.+++++...+..+
T Consensus 270 ~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~ 303 (735)
T KOG3626|consen 270 NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDF 303 (735)
T ss_pred CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeecc
Confidence 8888899999999999999988888888765444
No 256
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.12 E-value=0.22 Score=45.29 Aligned_cols=62 Identities=16% Similarity=0.084 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCC---chhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER---SRTTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
.+.+++++.++|.|..=+.+ .++..|-++++ .|.+.+...+...++|+.+++.+.+++.++.
T Consensus 35 ~~~~gL~lia~G~G~~K~ni---------~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~ 99 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNI---------SPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY 99 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHH---------HHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS
T ss_pred HHHHHHHHHHhccccccccH---------HHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc
Confidence 67777888888888666655 48888888765 4566788889999999999999999998765
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.89 E-value=2.3 Score=40.17 Aligned_cols=121 Identities=12% Similarity=0.000 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHh---CC--CCCchhHHHHHHHHHHH
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLF---LP--DDPSTGFMRGLVLVIMG 87 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~i~g 87 (279)
.+++.+.+.+.-++.+++..++.-+++++.+.-...+...++++++.....++... .. ......++.+...++++
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 46777888888888899999998886665222111111222222222111111111 11 22233446777778888
Q ss_pred HHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 88 LCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
++--+..|... .++....|+...+.++|+.......+..++..+.+
T Consensus 406 ~gEL~iSpvGL---------s~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 406 FGELFISPVGL---------SMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHhCHHHH---------HHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 87666656553 88889999988887777766665555555554444
No 258
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.64 E-value=0.019 Score=55.11 Aligned_cols=133 Identities=15% Similarity=0.241 Sum_probs=0.0
Q ss_pred ccCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHH-HHHHHHh----------CCC-
Q 037387 5 LSGFSHGSTAFLLTLFTI-AGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPI-AAVLLLF----------LPD- 71 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~- 71 (279)
++++++++++++.++..+ ++++|.+++|++..|+.-+.+...++ ..+..++.+.+ ...+++. .+.
T Consensus 335 QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~--~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~ 412 (539)
T PF03137_consen 335 QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKF--CIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYH 412 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHH--HHHHHHHHHHHHHHHHeecCCCCceeeecCccc
Confidence 689999999999877665 68889999999999986552222222 11112221111 0111100 001
Q ss_pred --------------------------C--------CchhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCC
Q 037387 72 --------------------------D--------PSTGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPER 117 (279)
Q Consensus 72 --------------------------~--------~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 117 (279)
. ......+++.+++..+..+...+.. .......+|++
T Consensus 413 ~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~---------~~i~LR~V~~~ 483 (539)
T PF03137_consen 413 NSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPS---------TLITLRCVPPE 483 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccch---------heeeeccCChh
Confidence 0 0001122222222222222222222 35666789999
Q ss_pred chhhHHHHHHHHHHHHH-hhHHHHHHHHHHHh
Q 037387 118 SRTTIYALDRSFESILS-SIAPPVVGLLAHHV 148 (279)
Q Consensus 118 ~r~~a~~~~~~~~~~g~-~i~~~~~g~l~~~~ 148 (279)
+|+.|.|+...+..+.+ .-+|.+.|.+.|..
T Consensus 484 ~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 484 QRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------
T ss_pred hcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 99999999988766655 56999999999975
No 259
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.87 E-value=0.053 Score=50.36 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=77.7
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHH-----HHHHhCCCCCch-
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAA-----VLLLFLPDDPST- 75 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~- 75 (279)
|.+.+|+++...+++..+.-+.+.+.+++.|..+||..-|+.++++.+ ...+..+.+-+.. -+...+.+....
T Consensus 58 yl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI-~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~ 136 (498)
T KOG0637|consen 58 YLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI-LAGSLLIAVSLFLIGYAADIGLLLGDNERKP 136 (498)
T ss_pred HHHHcCCCcccccccccccccccceecccccccccccccccccccchH-HHhhHHHHHHHhhhhhHhhhhHHhcCCcccc
Confidence 456789999999999999999999999999999997433332224442 2222222111111 111112122211
Q ss_pred hHHHHHHHHHHHH-----Hhh-hhhhhhcccccccCcccchhcccCCCchhh-HHHHHHHHHHHHHhhHHHHHH
Q 037387 76 GFMRGLVLVIMGL-----CIS-WNPIAANKYHLTTGYSPIFAEIVPERSRTT-IYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 76 ~~~~~~~~~i~g~-----~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~-a~~~~~~~~~~g~~i~~~~~g 142 (279)
.....+..++.|+ +.. ...| . .++..|....+.+-+ +.+.+.++..+|+.+|-.+++
T Consensus 137 ~~~rai~~~~lg~~LLD~A~n~~qgp-~---------ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 137 VKPRAIVLFILGFWLLDVANNTLQGP-C---------RALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchHHHHHHHHHhHHHHhhhhhhhhh-H---------HHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 1133444444454 332 2333 2 488999877666665 999999999999888776665
No 260
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.19 E-value=0.97 Score=44.76 Aligned_cols=42 Identities=14% Similarity=0.223 Sum_probs=35.6
Q ss_pred ccchhcccCCCchhhHHHHHHHHHHHHHh-hHHHHHHHHHHHh
Q 037387 107 SPIFAEIVPERSRTTIYALDRSFESILSS-IAPPVVGLLAHHV 148 (279)
Q Consensus 107 ~~~~~e~~p~~~r~~a~~~~~~~~~~g~~-i~~~~~g~l~~~~ 148 (279)
..++...+|++.|+.+.|+..++..+.+. -+|++.|+++|..
T Consensus 608 ~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 608 MLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred eEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 47778889999999999999887776655 5999999999864
No 261
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=91.04 E-value=3 Score=37.97 Aligned_cols=17 Identities=12% Similarity=0.079 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHhhh
Q 037387 22 IAGSLGGLFGGWMGDTL 38 (279)
Q Consensus 22 ~~~~~g~~~~g~l~dr~ 38 (279)
+.-++..+..|++..|+
T Consensus 6 i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34444555667777765
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.28 E-value=3.1 Score=39.19 Aligned_cols=105 Identities=7% Similarity=-0.003 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhhhhh
Q 037387 17 LTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWNPIA 96 (279)
Q Consensus 17 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 96 (279)
.++......+.+++++.+.|+++.| +.+.+........+...+. .+. + .+...-.+.|+|.+.....
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K-----~~lv~ga~~y~~f~~gfl~------~N~-y-~~yfssallG~Gaallw~G 122 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPK-----WALVIGATCYAAFPLGFLF------PNS-Y-YLYFSSALLGFGAALLWTG 122 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHH-----HHHHHHhHHHHHHHHHHHh------cch-H-HHHHHHHHhhhhHHheecc
Confidence 6667788889999999999999999 6644433333322222211 122 2 5556666778877743332
Q ss_pred hcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHH
Q 037387 97 ANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGL 143 (279)
Q Consensus 97 ~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~ 143 (279)
- -.|.+|...++.+.+-.|+...+...+..+|..+.-.
T Consensus 123 q---------G~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 123 Q---------GGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred c---------ceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 2 5899999999999999999888877776665544433
No 263
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=88.66 E-value=2.2 Score=40.49 Aligned_cols=105 Identities=10% Similarity=0.138 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhh
Q 037387 12 STAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCIS 91 (279)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 91 (279)
--|..-++..+.+.+.++..|++-.++.+- -.+.+.+...+ ...+++......+ .|+..+..++++..+.
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~-----~~l~l~v~s~~----~~gll~~m~~t~~-Iw~~Y~~yvlf~~~y~ 368 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARW-----SKLLIAVVSAI----QAGLVFWMSQSHD-IWVLYVTYVLFRGIYQ 368 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhh-----HHHHHHHHHHH----HHHHhhhhhcccc-hHHHHHHHHHHHHHHH
Confidence 345666677788888899999986665332 22112221111 1222222223333 3466777777777766
Q ss_pred hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHh
Q 037387 92 WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSS 135 (279)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~ 135 (279)
+..+.++ .-++.....+.-|..+|+.+++.-+...
T Consensus 369 flitia~---------~~iA~~L~~~~~aLvFGiNtfvAl~LQt 403 (511)
T TIGR00806 369 FLVPIAT---------FQIASSLSKELCALVFGINTFVATALKT 403 (511)
T ss_pred HHHHHHH---------HHHHHHhcccceEEEEecHHHHHHHHHH
Confidence 5555443 5566667777778899998876554443
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.24 E-value=24 Score=33.54 Aligned_cols=127 Identities=16% Similarity=0.087 Sum_probs=75.0
Q ss_pred CChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCC-------C--------
Q 037387 8 FSHGSTAFLLTLFTI-AGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLP-------D-------- 71 (279)
Q Consensus 8 ~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------- 71 (279)
.++....++-+..-+ ++++..++-.++.+++.+. +++....+..++..+++... ..| +
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~-----~vF~~~~~~F~~fF~LFa~V-i~P~~~~~hp~~~~~~~~~ 131 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTRE-----KVFYIILGFFLGFFALFAFV-IYPYKDILHPDPEFSRDLF 131 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHH-----HHHHHHHHHHHHHHHHHHHH-HhccccccCCCHHHHHHHH
Confidence 455667777666666 6777888889999999988 77655544443332222211 111 0
Q ss_pred --CC-chhH-------HHHHHHHHHHHHhh-hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHH
Q 037387 72 --DP-STGF-------MRGLVLVIMGLCIS-WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 72 --~~-~~~~-------~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~ 140 (279)
.+ ...| +.....+++.=-.+ ......- |....|+...++-.+-+++.+...+++..++..+
T Consensus 132 ~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lF--------w~faNeitt~~eakRFy~lf~l~~ni~lllsg~~ 203 (509)
T COG3202 132 ADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLF--------WQFANEITTIEEAKRFYPLFGLGANISLLLSGEV 203 (509)
T ss_pred hhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 11 1000 11122222221111 1111112 6888899999999999999999999988888888
Q ss_pred HHHHHHHh
Q 037387 141 VGLLAHHV 148 (279)
Q Consensus 141 ~g~l~~~~ 148 (279)
..++..+.
T Consensus 204 ~~~~~k~~ 211 (509)
T COG3202 204 TSWLSKHR 211 (509)
T ss_pred HHHHhhch
Confidence 88877643
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=84.92 E-value=16 Score=33.81 Aligned_cols=71 Identities=20% Similarity=0.184 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISW 92 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 92 (279)
.+.+..+..+...+..+++.++.+|+..+ .|+........+ ..+... ..++ .++-+++.++.+++.++
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~----~Ri~~~~~l~~~-----g~l~va--~~~~-v~~~l~Gv~las~ssg~ 128 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYW----IRILICVALSAA-----GMLLVA--FSPS-VWVRLLGVVLASLSSGL 128 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccch----HHHHHHHHHHHH-----HHhhee--eccc-hhHHHHHHHHHhhhhhh
Confidence 34456666777888888899999998754 244222222222 111111 2222 33666777777777775
Q ss_pred hhh
Q 037387 93 NPI 95 (279)
Q Consensus 93 ~~~ 95 (279)
.-.
T Consensus 129 GE~ 131 (402)
T PF02487_consen 129 GEV 131 (402)
T ss_pred hHH
Confidence 444
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.89 E-value=9.5 Score=35.75 Aligned_cols=54 Identities=11% Similarity=0.065 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHH
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~ 140 (279)
..++..+++|+..|+..... ..+..+.++++.|-.+..+..++..+|-.+|..+
T Consensus 374 ~~~~~~~l~gltnGy~~s~~---------m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 374 YFIILMLLFGFSNGYLGSLS---------MCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHhhhHHHHHH---------HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666888899998665544 3677788888888878777777777777666654
No 267
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.12 E-value=8.6 Score=33.92 Aligned_cols=105 Identities=16% Similarity=0.207 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCC--chhHHHHHHHHHHHHHh
Q 037387 13 TAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDP--STGFMRGLVLVIMGLCI 90 (279)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~g~~~ 90 (279)
-|++++.+.++.++|+-+..++..|-..|.-+...+ .+.+.+....+.++....++ .....-++...++-.|.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqi-----vf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cv 358 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQI-----VFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACV 358 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHH-----HHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHH
Confidence 478889999999999888887777655542222222 11111111111111111111 11113344445555666
Q ss_pred hhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHH
Q 037387 91 SWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFES 131 (279)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~ 131 (279)
|...|.+. -+-.+..|++.|++.+-++..-.+
T Consensus 359 GlfwPSim---------kmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 359 GLFWPSIM---------KMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred hhcchHHH---------HHHHhhCCHHHHhhhhhheechhh
Confidence 65555443 566788999999976655554333
No 268
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.66 E-value=12 Score=27.75 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=30.6
Q ss_pred CCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 116 ERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 116 ~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
++.++.+.++-.+.-.+++.+.....||+.++++|-.+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45677778888888888888888899999999866665
No 269
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=78.71 E-value=12 Score=29.58 Aligned_cols=28 Identities=4% Similarity=-0.075 Sum_probs=21.8
Q ss_pred ccchhcccCCCchhhHHHHHHHHHHHHH
Q 037387 107 SPIFAEIVPERSRTTIYALDRSFESILS 134 (279)
Q Consensus 107 ~~~~~e~~p~~~r~~a~~~~~~~~~~g~ 134 (279)
+.+++-..+++..|+..|+..+-.|++-
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 4666777888888889999888777654
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=77.78 E-value=18 Score=33.47 Aligned_cols=57 Identities=14% Similarity=-0.003 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 76 GFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 76 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
.|++++.++.-|+..|....-. ...+.|-.|+++|-.+.+......++|..++..++
T Consensus 335 i~ivf~lif~eGLlGGa~YVNt---------F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYVNT---------FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHHHH---------HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3466677888888888666633 35667778899999899988887777766655444
No 271
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=75.97 E-value=0.87 Score=40.43 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=2.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHhC-----CCCCchhHHHHHHHHHHHHH
Q 037387 16 LLTLFTIAGSLGGLFGGWMGDTL-AKRLPNSGRIILAQISFGSGIPIAAVLLLFL-----PDDPSTGFMRGLVLVIMGLC 89 (279)
Q Consensus 16 ~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~g~~ 89 (279)
++.+++++-.+|..+.++.-=+. .+| ++....+.=++.+|+........ +.....-++.++..+++|+.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~-----~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~T 261 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPR-----WLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFT 261 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccc-----cHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHc
Confidence 45567788888887777632110 122 33222223333333333221110 00001112556667788999
Q ss_pred hhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHH
Q 037387 90 ISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~ 140 (279)
.|+...... .+..+.++++.|-.+..+..++..+|-.+|..+
T Consensus 262 NGyl~tl~m---------~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 262 NGYLSTLAM---------MYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -----HHHH------------------------------------------
T ss_pred cchhhhcee---------eeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 986666553 778888888888877777777766666555543
No 272
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.73 E-value=36 Score=33.11 Aligned_cols=135 Identities=17% Similarity=0.057 Sum_probs=68.7
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHH-HHHHHHHHHHHH---HHHhCCC------C--
Q 037387 5 LSGFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQ-ISFGSGIPIAAV---LLLFLPD------D-- 72 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~------~-- 72 (279)
.++.+...+.-....+.-...+..+++++++|-+--| -+.+.+. +...+++....+ .....+. .
T Consensus 67 ~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gr----y~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~ 142 (571)
T KOG1237|consen 67 ELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGR----YFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGN 142 (571)
T ss_pred HhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCC
Confidence 4555666666667777777778889999999987544 0332221 111111111111 1111110 0
Q ss_pred ----Cc--hhHHHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccC---C-Cchh--hHHHHHHHHHHHHHhhHHHH
Q 037387 73 ----PS--TGFMRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVP---E-RSRT--TIYALDRSFESILSSIAPPV 140 (279)
Q Consensus 73 ----~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p---~-~~r~--~a~~~~~~~~~~g~~i~~~~ 140 (279)
++ ...++...+.+..+|.|..-++. .+.-+|-++ + +.+. .-+....+..++|..++-.+
T Consensus 143 ~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~---------~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~ 213 (571)
T KOG1237|consen 143 VCESPSKLQLAVLYGALYLIALGAGGIRPCL---------LAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV 213 (571)
T ss_pred cccCcchHHHHHHHHHHHHheeccCCCCCcc---------hhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHH
Confidence 01 11233334444444544444444 366677776 2 2222 44555666677777777777
Q ss_pred HHHHHHHhhCCCC
Q 037387 141 VGLLAHHVYGYKP 153 (279)
Q Consensus 141 ~g~l~~~~~g~~~ 153 (279)
.-++-++. ||..
T Consensus 214 ~vyiq~~~-~w~l 225 (571)
T KOG1237|consen 214 LVYIQDNV-GWKL 225 (571)
T ss_pred HHhhhhcc-ccee
Confidence 77776654 6654
No 273
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=75.13 E-value=37 Score=32.53 Aligned_cols=45 Identities=13% Similarity=0.012 Sum_probs=39.4
Q ss_pred ccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCC
Q 037387 107 SPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYK 152 (279)
Q Consensus 107 ~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~ 152 (279)
.+.-+.+.+|...|+.+.+.+.+.|+|+..-..++=++.|.+ .++
T Consensus 427 ~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f-T~~ 471 (544)
T PF13000_consen 427 MAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF-TVA 471 (544)
T ss_pred HHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc-ccc
Confidence 488889999999999999999999999999888888888865 443
No 274
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=71.48 E-value=63 Score=27.94 Aligned_cols=30 Identities=13% Similarity=0.031 Sum_probs=15.4
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 119 RTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 119 r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
|..+.|+....++.. ..+.||...++ ||-.
T Consensus 77 ~~iGLglg~liW~s~----n~l~Gw~~grf-GlFg 106 (254)
T PF07857_consen 77 KTIGLGLGMLIWGSV----NCLTGWASGRF-GLFG 106 (254)
T ss_pred hhhhhHHHHHHHHHH----HHHHHHHHhhc-eecc
Confidence 333444444444433 45667776654 6654
No 275
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.65 E-value=28 Score=25.79 Aligned_cols=26 Identities=38% Similarity=0.460 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Q 037387 15 FLLTLFTIAGSLGGLFGGWMGDTLAK 40 (279)
Q Consensus 15 ~~~~~~~~~~~~g~~~~g~l~dr~gr 40 (279)
+-++.=.+++++.....||+.||+-.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444456677777778899998743
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=69.42 E-value=40 Score=31.40 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhh
Q 037387 12 STAFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCIS 91 (279)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 91 (279)
--|.+-++..+.+.++++..|++..++.+- ..+.+..++.+.+. .++. ..... ..|+..+..++++....
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~----~~l~l~~~S~l~a~---~L~l--m~~t~-~Iwv~Y~~yIif~~~y~ 355 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRW----GELALGVFSLLQAG---LLFL--MSFTG-NIWVCYAGYIIFRSLYM 355 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHH----HHHHHHHHHHHHHH---HHHH--HHHhh-HHHHHHHHHHHHHHHHH
Confidence 457777788888888999999986666554 22222222222211 1111 11222 23355555555555555
Q ss_pred hhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHH
Q 037387 92 WNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILS 134 (279)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~ 134 (279)
+..+.++ .-++.....+.-+.++|+.+++..+..
T Consensus 356 fliTiA~---------~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 356 FLITIAS---------FQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHH---------HHHHHhccccceeeeeeeHHHHHHHHH
Confidence 4434332 445555567777888888776554443
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=66.90 E-value=1.1e+02 Score=28.45 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHhhhhhh
Q 037387 78 MRGLVLVIMGLCISWNPI 95 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~ 95 (279)
..++...+.+++.+....
T Consensus 119 vt~~~vv~~~~a~a~~qg 136 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQG 136 (406)
T ss_pred HHHHHHHHHhhhhhhhcc
Confidence 334444555555554333
No 278
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=66.14 E-value=37 Score=32.46 Aligned_cols=48 Identities=8% Similarity=-0.063 Sum_probs=26.6
Q ss_pred HHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 85 IMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 85 i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
+.-|.....-+++- .+.-.+..++.++-|....+..+++|..++-.+.
T Consensus 127 ~L~fl~ATQDIAVD---------GWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 127 ILVFLCATQDIAVD---------GWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred HHHHHHccCCceee---------hhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 34444445555553 4445566777777666555555666655544433
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=65.22 E-value=60 Score=30.12 Aligned_cols=114 Identities=12% Similarity=0.038 Sum_probs=59.9
Q ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHh-CCCCCchhHHHHHHHHHHH
Q 037387 10 HGSTAFLLTL-FTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLF-LPDDPSTGFMRGLVLVIMG 87 (279)
Q Consensus 10 ~~~~~~~~~~-~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~g 87 (279)
....-++..+ +++...+|.+...|+-++-. | .+.+..+.=.+.+|+..++... .+.....-++......++|
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~-r-----~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lg 354 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWPDP-R-----KLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLG 354 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCCCC-c-----eehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHH
Confidence 3344455555 78888888777666655543 3 3322223333333332222110 0100111125666777888
Q ss_pred HHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHH
Q 037387 88 LCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAP 138 (279)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~ 138 (279)
+..|...... ..+..+.+|++.+-.+-.+..++...|...|.
T Consensus 355 lsnGYltsl~---------m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 355 LSNGYLTSLI---------MMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred hccchHhhhe---------ehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888554444 37778888877776555555555555544443
No 280
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=62.22 E-value=1.1e+02 Score=26.72 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=14.3
Q ss_pred CCCchhhHHHHHHHHHHHHHhhHHHHHH
Q 037387 115 PERSRTTIYALDRSFESILSSIAPPVVG 142 (279)
Q Consensus 115 p~~~r~~a~~~~~~~~~~g~~i~~~~~g 142 (279)
.|+.-|.-+|+.-.++.+.-.+.-.+..
T Consensus 236 ~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S 263 (267)
T PF07672_consen 236 NPKKIGIQFGLIWGFGYIFYTIYDIILS 263 (267)
T ss_pred CcceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 4555565666655555554444444333
No 281
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=61.55 E-value=22 Score=24.91 Aligned_cols=25 Identities=12% Similarity=0.542 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHh
Q 037387 184 IPMAICCFIYSFLYCTYPRERERAR 208 (279)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (279)
+.+++++++|.+.+..|.+.++.++
T Consensus 14 v~~iiaIvvW~iv~ieYrk~~rqrk 38 (81)
T PF00558_consen 14 VALIIAIVVWTIVYIEYRKIKRQRK 38 (81)
T ss_dssp HHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334355566666666665554443
No 282
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=60.09 E-value=4.1 Score=38.58 Aligned_cols=46 Identities=17% Similarity=0.262 Sum_probs=39.2
Q ss_pred ccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 107 SPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 107 ~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
.++.+++..|+.++++.++.......+..++|.+...+.... |+++
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~ 455 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRP 455 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccH
Confidence 478899999999999999999999999999998888887754 6665
No 283
>PRK10263 DNA translocase FtsK; Provisional
Probab=57.49 E-value=2.8e+02 Score=30.02 Aligned_cols=16 Identities=13% Similarity=-0.101 Sum_probs=8.3
Q ss_pred HHHhhHHHHHHHHHHH
Q 037387 132 ILSSIAPPVVGLLAHH 147 (279)
Q Consensus 132 ~g~~i~~~~~g~l~~~ 147 (279)
.|+.+|..+..++...
T Consensus 142 gGGIIG~lLs~lL~~L 157 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPL 157 (1355)
T ss_pred ccchHHHHHHHHHHHH
Confidence 3555555555555443
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=56.89 E-value=1.8e+02 Score=27.73 Aligned_cols=40 Identities=13% Similarity=0.015 Sum_probs=35.7
Q ss_pred ccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Q 037387 107 SPIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAH 146 (279)
Q Consensus 107 ~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~ 146 (279)
|.+..|++..++-.+-+++.....+++..++..+..++.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999998888888877776
No 285
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=49.16 E-value=2.9e+02 Score=27.75 Aligned_cols=14 Identities=7% Similarity=0.228 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHhh
Q 037387 78 MRGLVLVIMGLCIS 91 (279)
Q Consensus 78 ~~~~~~~i~g~~~~ 91 (279)
++..++++.+|+.+
T Consensus 83 ~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 83 LFPFLLTLLTFGFI 96 (701)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444454443
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=47.97 E-value=56 Score=30.42 Aligned_cols=45 Identities=18% Similarity=0.097 Sum_probs=39.9
Q ss_pred cchhcccCCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhCCCC
Q 037387 108 PIFAEIVPERSRTTIYALDRSFESILSSIAPPVVGLLAHHVYGYKP 153 (279)
Q Consensus 108 ~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~g~l~~~~~g~~~ 153 (279)
+..+.+.||...|+-+.+.+...++|+..=..++.++.|.. +++.
T Consensus 392 af~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l-tv~~ 436 (510)
T KOG3574|consen 392 AFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL-TVKQ 436 (510)
T ss_pred HHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC-ceee
Confidence 77889999999999999999999999999889999999864 6654
No 287
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=46.14 E-value=2.8e+02 Score=26.67 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=6.6
Q ss_pred ccCCChhHHHHHHHH
Q 037387 5 LSGFSHGSTAFLLTL 19 (279)
Q Consensus 5 ~~g~s~~~~~~~~~~ 19 (279)
.-|.++.....+..+
T Consensus 261 ~tG~~~~~~~~~a~i 275 (518)
T KOG2568|consen 261 STGMSPKVYTVFASI 275 (518)
T ss_pred ccCCCchhHHHHHHH
Confidence 345555444433333
No 288
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=46.14 E-value=2e+02 Score=25.01 Aligned_cols=8 Identities=25% Similarity=0.550 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 037387 82 VLVIMGLC 89 (279)
Q Consensus 82 ~~~i~g~~ 89 (279)
.+++.+|+
T Consensus 29 ~~~~~~F~ 36 (284)
T PF12805_consen 29 VLALLTFF 36 (284)
T ss_pred HHHHHHHH
Confidence 33333333
No 289
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=45.96 E-value=1.1e+02 Score=22.01 Aligned_cols=10 Identities=10% Similarity=0.238 Sum_probs=4.8
Q ss_pred HHHHHhhhhh
Q 037387 31 GGWMGDTLAK 40 (279)
Q Consensus 31 ~g~l~dr~gr 40 (279)
...+.|...+
T Consensus 73 ~~~~~~~~~~ 82 (141)
T TIGR00880 73 AALIADIYPP 82 (141)
T ss_pred HHHHHHHCCh
Confidence 3445555543
No 290
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=45.05 E-value=59 Score=29.85 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHhhhh
Q 037387 14 AFLLTLFTIAGSLGGLFGGWMGDTLAKRLPNSGRIILAQISFGSGIPIAAVLLLFLPDDPSTGFMRGLVLVIMGLCISWN 93 (279)
Q Consensus 14 ~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 93 (279)
|..-.+..+.++++.+..|++--.+.|. +..++...+... +.+.+....+.. .|+..+..+++.......
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~----g~~ll~~~s~~~-----agllf~m~~t~~-Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRW----GDLLLAVGSAVQ-----AGLLFIMAQTQH-IWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchh----hHHHHHHHHHHh-----hhhhhhhhcccc-eehhhhhHHHHHhhHhhh
Confidence 4445566777888888999987777665 233222222221 122222223333 225555555555444433
Q ss_pred hhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHH
Q 037387 94 PIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESIL 133 (279)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g 133 (279)
.+.+ ..-+++-...+.-|..+|+.+++.-+.
T Consensus 344 itiA---------~~~iA~nL~~e~~gLvFGiNTFvAl~l 374 (433)
T KOG3810|consen 344 ITIA---------TFQIARNLSSELFGLVFGINTFVALIL 374 (433)
T ss_pred hhHH---------HHHHHHhhhhhhheeeeehHHHHHHHH
Confidence 3322 244556667777888888887654433
No 291
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=44.56 E-value=71 Score=24.84 Aligned_cols=23 Identities=22% Similarity=0.229 Sum_probs=17.3
Q ss_pred hhcccCCCchhhHHHHHHHHHHH
Q 037387 110 FAEIVPERSRTTIYALDRSFESI 132 (279)
Q Consensus 110 ~~e~~p~~~r~~a~~~~~~~~~~ 132 (279)
+.|++|+..|..+.+..+.....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 47999999999877776654443
No 292
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=43.59 E-value=3.6e+02 Score=27.17 Aligned_cols=12 Identities=8% Similarity=0.072 Sum_probs=6.0
Q ss_pred HHHHHHHhhhhh
Q 037387 29 LFGGWMGDTLAK 40 (279)
Q Consensus 29 ~~~g~l~dr~gr 40 (279)
.+.+-++|.=++
T Consensus 41 ~ia~al~D~d~~ 52 (704)
T TIGR01666 41 IIAAALVDLDDR 52 (704)
T ss_pred HHhhccCCCCCc
Confidence 344556665443
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=43.18 E-value=80 Score=29.45 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=10.9
Q ss_pred HHHHHHHHh-----hhhhc
Q 037387 28 GLFGGWMGD-----TLAKR 41 (279)
Q Consensus 28 ~~~~g~l~d-----r~grr 41 (279)
-+++..++| |+|||
T Consensus 80 KllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred HHHHHhhhHHHHHHhhccc
Confidence 456677788 99998
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=43.13 E-value=2.8e+02 Score=25.90 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q 037387 120 TTIYALDRSFESILSSIAPPVVGLLAHHV 148 (279)
Q Consensus 120 ~~a~~~~~~~~~~g~~i~~~~~g~l~~~~ 148 (279)
....+.....-.....+.|.+.|.+....
T Consensus 174 t~mnatir~iDq~tn~Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 174 TNMNATIRGIDQSTNLLAPVITGLIITFV 202 (503)
T ss_pred hhcchhhhhhhhhhhchhhhhhcccceee
Confidence 33345555566666788999999987744
No 295
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=38.86 E-value=53 Score=18.78 Aligned_cols=20 Identities=30% Similarity=0.604 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 037387 18 TLFTIAGSLGGLFGGWMGDT 37 (279)
Q Consensus 18 ~~~~~~~~~g~~~~g~l~dr 37 (279)
....+++++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 45667777778887877654
No 296
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=37.58 E-value=67 Score=25.14 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=16.7
Q ss_pred hhcccCCCchhhHHHHHHHHHH
Q 037387 110 FAEIVPERSRTTIYALDRSFES 131 (279)
Q Consensus 110 ~~e~~p~~~r~~a~~~~~~~~~ 131 (279)
+.|++|+..|..+.+..+....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 5799999999977777665444
No 297
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.95 E-value=64 Score=23.87 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=26.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 9 SHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 9 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
.+...|-....++-..++.+++.+|..|+..+.
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 346678888888889999999999999987554
No 298
>PRK02237 hypothetical protein; Provisional
Probab=36.47 E-value=1e+02 Score=22.92 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
...|-....++-.+++.+++.+|++|+.-+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd 86 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPD 86 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCC
Confidence 4578888888888888888899998886544
No 299
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=32.96 E-value=1.3e+02 Score=19.65 Aligned_cols=15 Identities=27% Similarity=0.614 Sum_probs=9.6
Q ss_pred HHHHHHHHHhhchhh
Q 037387 189 CCFIYSFLYCTYPRE 203 (279)
Q Consensus 189 ~~~~~~~~~~~~~~~ 203 (279)
.+++|+.++...|+.
T Consensus 45 ~~l~Y~~~w~~lP~~ 59 (61)
T PF04024_consen 45 GILLYLILWLLLPKE 59 (61)
T ss_pred HHHHHHHHHHHcCCC
Confidence 555677766667753
No 300
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=30.25 E-value=4.2e+02 Score=26.34 Aligned_cols=55 Identities=13% Similarity=-0.032 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhcccccccCcccchhcccCCCchhhHHHHHHHHHHHHHhhHHHHH
Q 037387 78 MRGLVLVIMGLCISWNPIAANKYHLTTGYSPIFAEIVPERSRTTIYALDRSFESILSSIAPPVV 141 (279)
Q Consensus 78 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~a~~~~~~~~~~g~~i~~~~~ 141 (279)
+.+.-.++.+.+-.+..... .-....-.|++.+..+.++..+...+|..+...+.
T Consensus 567 wq~pq~~~~~~~e~~~~~~~---------~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~ 621 (654)
T TIGR00926 567 WQIPQYVILTAGEVLFSVTG---------LEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIA 621 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555555544333322 13333446888888888887777776665554443
No 301
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=29.52 E-value=2.7e+02 Score=21.53 Aligned_cols=24 Identities=13% Similarity=0.365 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhh
Q 037387 14 AFLLTLFTIAGSLGGLFGGW-MGDT 37 (279)
Q Consensus 14 ~~~~~~~~~~~~~g~~~~g~-l~dr 37 (279)
.+.+.+..+..+++.+++|| +++.
T Consensus 78 qls~v~Nilvsv~~~~~~~~~~~~~ 102 (142)
T PF11712_consen 78 QLSTVFNILVSVFAVFFAGWYWAGY 102 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677888888888998 5553
No 302
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=27.90 E-value=2.1e+02 Score=23.41 Aligned_cols=21 Identities=14% Similarity=0.351 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 037387 20 FTIAGSLGGLFGGWMGDTLAK 40 (279)
Q Consensus 20 ~~~~~~~g~~~~g~l~dr~gr 40 (279)
+-++..+++++.|++.||.-+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 456778888999999999875
No 303
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=23.31 E-value=3.2e+02 Score=20.30 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=18.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 7 GFSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 7 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
.+++....+. ..+...++.+++|+++-|..++
T Consensus 33 ~~~e~~~~~~---~~~i~~ls~~~GG~~a~~~~~~ 64 (116)
T PF12670_consen 33 SLSESILPWL---VVIIYILSVFIGGFYAGRKAGS 64 (116)
T ss_pred CCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHcc
Confidence 3454444433 4555667777788877765444
No 304
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=23.24 E-value=47 Score=29.25 Aligned_cols=40 Identities=23% Similarity=0.374 Sum_probs=33.0
Q ss_pred ceeccCCChhHHHHHHHHHHHHHHHHHHHHH---------HHHhhhhhc
Q 037387 2 WFELSGFSHGSTAFLLTLFTIAGSLGGLFGG---------WMGDTLAKR 41 (279)
Q Consensus 2 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g---------~l~dr~grr 41 (279)
|+++.|.++...+.++....+.-.+..++.| +-.||+|||
T Consensus 43 fltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 43 FLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred HHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 5678899999988888888888888888775 446799998
No 305
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=22.62 E-value=6.1e+02 Score=23.35 Aligned_cols=7 Identities=29% Similarity=0.278 Sum_probs=3.5
Q ss_pred ccchhcc
Q 037387 107 SPIFAEI 113 (279)
Q Consensus 107 ~~~~~e~ 113 (279)
|-++.|.
T Consensus 256 ~~i~~E~ 262 (374)
T PF01528_consen 256 YLIVIEV 262 (374)
T ss_pred HHHHHHH
Confidence 4455554
No 306
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=22.15 E-value=4.1e+02 Score=24.34 Aligned_cols=34 Identities=12% Similarity=0.332 Sum_probs=30.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 8 FSHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 8 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
+.-+..++++.+++++..+.+.+.|.++.++||-
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~ 340 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRP 340 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 3456789999999999999999999999999998
No 307
>COG3619 Predicted membrane protein [Function unknown]
Probab=21.66 E-value=5e+02 Score=22.02 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 037387 11 GSTAFLLTLFTIAGSLGGLFGGWMGDTLAK 40 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr 40 (279)
...........+..++|..++..+..|..|
T Consensus 55 ~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 55 AALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334455556666677776665566665554
No 308
>COG5346 Predicted membrane protein [Function unknown]
Probab=21.42 E-value=3.4e+02 Score=20.67 Aligned_cols=11 Identities=18% Similarity=0.196 Sum_probs=6.7
Q ss_pred HHHHHhhhhhc
Q 037387 31 GGWMGDTLAKR 41 (279)
Q Consensus 31 ~g~l~dr~grr 41 (279)
-|.+..|+.|+
T Consensus 82 r~~~~~~~tri 92 (136)
T COG5346 82 RGQLYAKLTRI 92 (136)
T ss_pred HHHHHHHHHHH
Confidence 35566666666
No 309
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.87 E-value=3.7e+02 Score=25.85 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=20.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 037387 9 SHGSTAFLLTLFTIAGSLGGLFGGWMGDTLAKR 41 (279)
Q Consensus 9 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr 41 (279)
++..-|.+.+...+..+++++++|+.+-|+-+.
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 334345556666666777777777777776543
No 310
>PF03818 MadM: Malonate/sodium symporter MadM subunit; InterPro: IPR018402 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM.The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=20.01 E-value=2.7e+02 Score=18.27 Aligned_cols=14 Identities=14% Similarity=0.397 Sum_probs=10.5
Q ss_pred HHHHHHHHhhhhhc
Q 037387 28 GLFGGWMGDTLAKR 41 (279)
Q Consensus 28 ~~~~g~l~dr~grr 41 (279)
..++.++++|+-|.
T Consensus 24 m~~S~~lS~~LT~G 37 (60)
T PF03818_consen 24 MWVSYWLSKKLTRG 37 (60)
T ss_pred HHHHHHHHHHHhCC
Confidence 45677888888776
Done!