BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037390
(78 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296084812|emb|CBI27694.3| unnamed protein product [Vitis vinifera]
Length = 904
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDL GK LQ IVFAKMLLM+T+DLL + + +NG+R+ISWWL R++L QR+L
Sbjct: 165 MSSGSDLFGKTYNLQYIVFAKMLLMRTKDLLFEGSFTSINGVRSISWWLARVILFQQRVL 224
Query: 61 DERSSSLYDLLKVL 74
DERSSSL+DLL+V
Sbjct: 225 DERSSSLFDLLQVF 238
>gi|359480921|ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein 27 homolog [Vitis
vinifera]
Length = 909
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDL GK LQ IVFAKMLLM+T+DLL + + +NG+R+ISWWL R++L QR+L
Sbjct: 165 MSSGSDLFGKTYNLQYIVFAKMLLMRTKDLLFEGSFTSINGVRSISWWLARVILFQQRVL 224
Query: 61 DERSSSLYDLLKVL 74
DERSSSL+DLL+V
Sbjct: 225 DERSSSLFDLLQVF 238
>gi|147798562|emb|CAN76690.1| hypothetical protein VITISV_001363 [Vitis vinifera]
Length = 438
Score = 99.0 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 58/74 (78%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDL GK LQ IVFAKMLLM+T+DLL + + NG+R+ISWWL R++L QR+L
Sbjct: 165 MSSGSDLFGKTYNLQYIVFAKMLLMRTKDLLFEGSFTSXNGVRSISWWLARVILFQQRVL 224
Query: 61 DERSSSLYDLLKVL 74
DERSSSL+DLL+V
Sbjct: 225 DERSSSLFDLLQVF 238
>gi|255571269|ref|XP_002526584.1| conserved hypothetical protein [Ricinus communis]
gi|223534078|gb|EEF35796.1| conserved hypothetical protein [Ricinus communis]
Length = 891
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS G LLGKFS LQ IVF+K+L+MK +DLL ++ + GIRTISWWL R+LL+ QRIL
Sbjct: 165 MSSGCHLLGKFSNLQFIVFSKLLVMKIKDLLFGGSLASIYGIRTISWWLVRILLVQQRIL 224
Query: 61 DERSSSLYDLLKV 73
DE SSSL+DLL+V
Sbjct: 225 DELSSSLFDLLQV 237
>gi|449484137|ref|XP_004156795.1| PREDICTED: tetratricopeptide repeat protein 27-like [Cucumis
sativus]
Length = 416
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
M GSDL GKF+ +Q IVFAKMLL + +D+L G+++ISWWL R+LL QRIL
Sbjct: 169 MFTGSDLFGKFTNIQYIVFAKMLLTRIKDMLFKENTSSKYGMKSISWWLARVLLCQQRIL 228
Query: 61 DERSSSLYDLLKVL 74
DERSSSL+D L+VL
Sbjct: 229 DERSSSLFDHLQVL 242
>gi|449468426|ref|XP_004151922.1| PREDICTED: tetratricopeptide repeat protein 27 homolog [Cucumis
sativus]
Length = 897
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
M GSDL GKF+ +Q IVFAKMLL + +D+L G+++ISWWL R+LL QRIL
Sbjct: 169 MFTGSDLFGKFTNIQYIVFAKMLLTRIKDMLFKENTSSKYGMKSISWWLARVLLCQQRIL 228
Query: 61 DERSSSLYDLLKVL 74
DERSSSL+D L+VL
Sbjct: 229 DERSSSLFDHLQVL 242
>gi|356507408|ref|XP_003522459.1| PREDICTED: tetratricopeptide repeat protein 27 homolog [Glycine
max]
Length = 910
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDLLGKFS LQ IVFAKMLLM+ +DL + I ++SWWL R+LL+ QR+L
Sbjct: 159 MSAGSDLLGKFSNLQYIVFAKMLLMRMKDLSVE--------IGSLSWWLARVLLLQQRVL 210
Query: 61 DERSSSLYDLLKVL 74
DERSSSL DLL V
Sbjct: 211 DERSSSLSDLLHVF 224
>gi|357464833|ref|XP_003602698.1| Tetratricopeptide repeat protein, partial [Medicago truncatula]
gi|355491746|gb|AES72949.1| Tetratricopeptide repeat protein, partial [Medicago truncatula]
Length = 660
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
M+ GSDLLGKFS LQ IVF+KMLLM+ +DL D IR+++WWL R+LL+ QRIL
Sbjct: 160 MADGSDLLGKFSNLQYIVFSKMLLMRMKDLSVDIR------IRSLTWWLGRVLLLEQRIL 213
Query: 61 DERSSSLYDLLKV 73
DERSS+L+DLL
Sbjct: 214 DERSSTLFDLLHA 226
>gi|15237943|ref|NP_197229.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|10177072|dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana]
gi|332005024|gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 899
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MSVGSDLLGKFS LQ +VFA++LL K +DLL + T +R+ISWWL R+LL+HQR+L
Sbjct: 170 MSVGSDLLGKFSNLQHLVFARLLLFKLKDLLFEITSTETFEVRSISWWLVRVLLIHQRVL 229
Query: 61 DERSSSLYDLLKV 73
ERSSSL+++L+V
Sbjct: 230 QERSSSLFEMLQV 242
>gi|297807747|ref|XP_002871757.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317594|gb|EFH48016.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 892
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/73 (61%), Positives = 59/73 (80%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MSVGSDLLGKF LQ +VFA+MLL+K +DLL + T +R+ISWWL R+LL+HQR+L
Sbjct: 164 MSVGSDLLGKFFNLQHLVFARMLLLKLKDLLFETTATETFELRSISWWLVRVLLIHQRVL 223
Query: 61 DERSSSLYDLLKV 73
ERSSSL+++L+V
Sbjct: 224 HERSSSLFEMLQV 236
>gi|297807751|ref|XP_002871759.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317596|gb|EFH48018.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 871
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDLLGKFS LQ +VFA++LL+K +DLL + T +R+ISWWL R+LL+HQR+L
Sbjct: 158 MSAGSDLLGKFSNLQHLVFARLLLLKLKDLLFETTATETFELRSISWWLVRVLLIHQRVL 217
Query: 61 DERSSSLYDLLKV 73
ERSSSL+++L+V
Sbjct: 218 HERSSSLFEMLQV 230
>gi|145358569|ref|NP_198529.3| prenylyltransferase-like protein [Arabidopsis thaliana]
gi|332006762|gb|AED94145.1| prenylyltransferase-like protein [Arabidopsis thaliana]
Length = 877
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDLLGKFS LQ +VFA++LL+K +DLL + + +R+ISWWL R+LL+HQR+L
Sbjct: 162 MSAGSDLLGKFSNLQHLVFARLLLLKLKDLLFETSASETFQLRSISWWLVRVLLIHQRVL 221
Query: 61 DERSSSLYDLLKV 73
E SSSL+++L+V
Sbjct: 222 HEPSSSLFEMLQV 234
>gi|10177994|dbj|BAB11367.1| unnamed protein product [Arabidopsis thaliana]
Length = 856
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDLLGKFS LQ +VFA++LL+K +DLL + + +R+ISWWL R+LL+HQR+L
Sbjct: 162 MSAGSDLLGKFSNLQHLVFARLLLLKLKDLLFETSASETFQLRSISWWLVRVLLIHQRVL 221
Query: 61 DERSSSLYDLLKV 73
E SSSL+++L+V
Sbjct: 222 HEPSSSLFEMLQV 234
>gi|224077388|ref|XP_002305241.1| predicted protein [Populus trichocarpa]
gi|222848205|gb|EEE85752.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 22 MLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
ML+MK +DLL + ++ GIR+ISWWL R+LL+ QRILDE SSSL+DLL+V
Sbjct: 1 MLVMKAKDLLFEGSISSAYGIRSISWWLARVLLVEQRILDELSSSLFDLLQV 52
>gi|356518832|ref|XP_003528081.1| PREDICTED: uncharacterized protein LOC100782837 [Glycine max]
Length = 813
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 8/73 (10%)
Query: 1 MSVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
MS GSDLLGKFS LQ +V AKMLLM+ +DL + I ++SWWL R+LL+ R+L
Sbjct: 157 MSAGSDLLGKFSNLQYLVLAKMLLMRMKDLSVE--------IGSLSWWLARVLLLQLRVL 208
Query: 61 DERSSSLYDLLKV 73
DERSSSL DLL V
Sbjct: 209 DERSSSLSDLLHV 221
>gi|414589125|tpg|DAA39696.1| TPA: hypothetical protein ZEAMMB73_853087 [Zea mays]
Length = 538
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDL-LSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
S GS + GKFS LQ IVFA++L + L LSD ++SWWL R+ ++ Q IL
Sbjct: 196 SFGSHVHGKFSLLQFIVFARLLFTSVQSLDLSDCW--------SVSWWLFRISMLQQNIL 247
Query: 61 DERSSSLYDLLKV 73
DE SSSL+D ++V
Sbjct: 248 DELSSSLFDQVQV 260
>gi|414589124|tpg|DAA39695.1| TPA: hypothetical protein ZEAMMB73_853087 [Zea mays]
Length = 517
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDL-LSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
S GS + GKFS LQ IVFA++L + L LSD ++SWWL R+ ++ Q IL
Sbjct: 196 SFGSHVHGKFSLLQFIVFARLLFTSVQSLDLSDCW--------SVSWWLFRISMLQQNIL 247
Query: 61 DERSSSLYDLLKV 73
DE SSSL+D ++V
Sbjct: 248 DELSSSLFDQVQV 260
>gi|242048390|ref|XP_002461941.1| hypothetical protein SORBIDRAFT_02g010930 [Sorghum bicolor]
gi|241925318|gb|EER98462.1| hypothetical protein SORBIDRAFT_02g010930 [Sorghum bicolor]
Length = 631
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDL-LSDATVLPVNGIRTISWWLTRLLLMHQRIL 60
S GS + GKFS LQ IVFAK+L + L LSD +P WWL R+ + Q IL
Sbjct: 172 SFGSHVHGKFSLLQFIVFAKLLFTSLQSLDLSDCCSVP--------WWLFRISMFQQNIL 223
Query: 61 DERSSSLYDLLKV 73
D+ SSSL+D ++V
Sbjct: 224 DDLSSSLFDQVQV 236
>gi|357116974|ref|XP_003560251.1| PREDICTED: tetratricopeptide repeat protein 27 homolog
[Brachypodium distachyon]
Length = 889
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILD 61
S GS + GKFS LQ IVFA++L + L S + ++SWWL R+ + Q ILD
Sbjct: 165 SFGSHVHGKFSLLQYIVFAELLFTIIKSLDS-------SDCWSVSWWLCRISISQQNILD 217
Query: 62 ERSSSLYDLLKV 73
E SSSL+D L+V
Sbjct: 218 ELSSSLFDQLQV 229
>gi|28971999|dbj|BAC65407.1| tetratricopeptide repeat (TPR)-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 895
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILD 61
S+GS + GKFS +Q IVFA+++L + L D T ++SWWL RL ++ Q I+D
Sbjct: 173 SIGSHVHGKFSLMQFIVFAELMLTSIKSL--DPT-----DCCSVSWWLCRLSMVRQNIVD 225
Query: 62 ERSSSLYD 69
E SS+L+D
Sbjct: 226 ELSSTLFD 233
>gi|222636976|gb|EEE67108.1| hypothetical protein OsJ_24118 [Oryza sativa Japonica Group]
Length = 901
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILD 61
S+GS + GKFS +Q IVFA+++L + L D T ++SWWL RL ++ Q I+D
Sbjct: 173 SIGSHVHGKFSLMQFIVFAELMLTSIKSL--DPT-----DCCSVSWWLCRLSMVRQNIVD 225
Query: 62 ERSSSLYD 69
E SS+L+D
Sbjct: 226 ELSSTLFD 233
>gi|218199541|gb|EEC81968.1| hypothetical protein OsI_25869 [Oryza sativa Indica Group]
Length = 876
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILD 61
S+GS + GKFS +Q IVFA+++L + L D T ++SWWL RL ++ Q I+D
Sbjct: 173 SIGSHVHGKFSLMQFIVFAELMLTSIKSL--DPT-----DCCSVSWWLCRLSMVRQNIVD 225
Query: 62 ERSSSLYD 69
E SS+L+D
Sbjct: 226 ELSSTLFD 233
>gi|326497117|dbj|BAK02143.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 2 SVGSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILD 61
+ GS + GKF+ L IVFA++L + L S + ++ WWL R+ L Q ILD
Sbjct: 171 AFGSHVHGKFALLPFIVFAELLFTSIQGLDS-------SDCWSVQWWLCRISLSQQNILD 223
Query: 62 ERSSSLYDLLKV 73
E SSSL+D ++V
Sbjct: 224 ELSSSLFDRVQV 235
>gi|297607160|ref|NP_001059558.2| Os07g0455100 [Oryza sativa Japonica Group]
gi|255677734|dbj|BAF21472.2| Os07g0455100 [Oryza sativa Japonica Group]
Length = 967
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 30/91 (32%)
Query: 2 SVGSDLLGKFSYLQD-----------------------IVFAKMLLMKTRDLLSDATVLP 38
S+GS + GKFS +Q IVFA+++L + L D T
Sbjct: 173 SIGSHVHGKFSLMQCNGWFNRVKHSGFMVFCILRIIMFIVFAELMLTSIKSL--DPT--- 227
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYD 69
++SWWL RL ++ Q I+DE SS+L+D
Sbjct: 228 --DCCSVSWWLCRLSMVRQNIVDELSSTLFD 256
>gi|168028284|ref|XP_001766658.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682090|gb|EDQ68511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 919
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 4 GSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDER 63
G DLLGK + ++ +K LL+ D+ + + G T SWW R + QR L ER
Sbjct: 171 GCDLLGKLYVPEYLILSKYLLV---DIKTKSA-----GFATRSWWALRNSITQQRCLAER 222
Query: 64 SSSLYDLLKVL 74
S SL LL+ L
Sbjct: 223 SPSLQSLLRDL 233
>gi|291242961|ref|XP_002741346.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 808
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 11/63 (17%)
Query: 7 LLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSS 66
L+GK YL + A+ LL+ R LL +T+ WW R L + QR+LDERS +
Sbjct: 160 LVGKPLYL---LIAQTLLIDCRKLLPSC--------QTVDWWALRCLFVKQRLLDERSPT 208
Query: 67 LYD 69
+D
Sbjct: 209 CHD 211
>gi|301609908|ref|XP_002934504.1| PREDICTED: tetratricopeptide repeat protein 27 [Xenopus (Silurana)
tropicalis]
Length = 768
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 8/52 (15%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLY 68
++ A+++ +K R+ L++ +LP WW R + +HQ++LDERS L+
Sbjct: 157 LLIARVIFVKLRNKLTEFQMLP--------WWTLRCINVHQQLLDERSPELF 200
>gi|390345962|ref|XP_787826.3| PREDICTED: tetratricopeptide repeat protein 27-like
[Strongylocentrotus purpuratus]
Length = 703
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLL 71
+T WW R L + Q++LDERS LYDL+
Sbjct: 160 KTADWWRLRCLWVQQQVLDERSPQLYDLI 188
>gi|326915394|ref|XP_003204003.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
27-like [Meleagris gallopavo]
Length = 844
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
++ A+++L+ +R LS LP WW R + +HQ++L+ERS L+ L
Sbjct: 161 LLIARVILVNSRHKLSSLQTLP--------WWTLRCVNIHQQLLEERSPELFTL 206
>gi|390348141|ref|XP_001193481.2| PREDICTED: tetratricopeptide repeat protein 27-like
[Strongylocentrotus purpuratus]
Length = 871
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLL 71
+T WW R L + Q++LDERS LYDL+
Sbjct: 207 KTADWWRLRCLWVQQQVLDERSPQLYDLI 235
>gi|60302782|ref|NP_001012585.1| tetratricopeptide repeat protein 27 [Gallus gallus]
gi|82231190|sp|Q5F3K0.1|TTC27_CHICK RecName: Full=Tetratricopeptide repeat protein 27; Short=TPR repeat
protein 27
gi|60098907|emb|CAH65284.1| hypothetical protein RCJMB04_15c1 [Gallus gallus]
Length = 844
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
++ A+++L+ +R LS LP WW R + +HQ++L+ERS L+ L ++
Sbjct: 161 LLIARVVLVNSRHKLSSLQTLP--------WWTLRCVNIHQQLLEERSPELFTLAQM 209
>gi|194748058|ref|XP_001956466.1| GF25224 [Drosophila ananassae]
gi|190623748|gb|EDV39272.1| GF25224 [Drosophila ananassae]
Length = 797
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 23 LLMKTRDLLSDA-TVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKVLCMI 77
LL+ +D+L + V P + + ++WW RL+ +HQ ILD+ ++ LY+ K + ++
Sbjct: 126 LLLVAKDILKNLLEVYPDS--KVLNWWHLRLICLHQHILDDLAAELYEKFKAVAVV 179
>gi|390368934|ref|XP_001199290.2| PREDICTED: tetratricopeptide repeat protein 27-like, partial
[Strongylocentrotus purpuratus]
Length = 438
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLL 71
+T WW R L + Q++LDERS LYDL+
Sbjct: 206 KTADWWRLRCLWVQQQVLDERSPQLYDLI 234
>gi|327262373|ref|XP_003215999.1| PREDICTED: tetratricopeptide repeat protein 27-like [Anolis
carolinensis]
Length = 846
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 22 MLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
+LLM R +L ++ + I+T+ WW R + +HQ++L+ERS L+ + +V
Sbjct: 161 VLLMLARAVLVNSR-HKLETIQTLPWWTLRCVTIHQQLLEERSPELFAVAQV 211
>gi|195022275|ref|XP_001985544.1| GH14446 [Drosophila grimshawi]
gi|193899026|gb|EDV97892.1| GH14446 [Drosophila grimshawi]
Length = 808
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 23 LLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
LL+ + +L DA + + +SWW RL+ +HQ +LD+ +S+LY+ K+
Sbjct: 128 LLLVAQQML-DALIAAQPTSKLLSWWRLRLVCLHQHMLDDLASALYEQFKL 177
>gi|345304876|ref|XP_003428272.1| PREDICTED: tetratricopeptide repeat protein 27 [Ornithorhynchus
anatinus]
Length = 773
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 42 IRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
I+T WW R + +HQ++L+ERS +L+ L +V
Sbjct: 174 IQTFPWWTLRCVRVHQQLLEERSPNLFALAQV 205
>gi|449283214|gb|EMC89895.1| Tetratricopeptide repeat protein 27, partial [Columba livia]
Length = 815
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 42 IRTISWWLTRLLLMHQRILDERSSSLYDL 70
++T+SWW R + +HQ++L+ERS L+ L
Sbjct: 149 LQTLSWWTLRYVNIHQQLLEERSPELFTL 177
>gi|194871643|ref|XP_001972878.1| GG15767 [Drosophila erecta]
gi|190654661|gb|EDV51904.1| GG15767 [Drosophila erecta]
Length = 798
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ + WW RL+ +HQ +LD+ ++SLYD K
Sbjct: 145 KVLIWWRLRLICLHQHVLDDLAASLYDQFK 174
>gi|291386951|ref|XP_002709970.1| PREDICTED: tetratricopeptide repeat domain 27 [Oryctolagus
cuniculus]
Length = 847
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
++ A+++L++ R L+ LP WW R + +HQ++L+ERS L+ L
Sbjct: 165 LLVARIILVRVRHRLTAVQSLP--------WWTLRCVNIHQQLLEERSPQLFAL 210
>gi|281208127|gb|EFA82305.1| tetratricopeptide repeat domain 27 [Polysphondylium pallidum PN500]
Length = 844
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 4 GSDLLGKFSYLQDIVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDER 63
G + K ++ Q + A++ L+ L+D G R+ WW R ++ HQR LD
Sbjct: 147 GETIYTKVAHPQLLYLARLCLVDNYQFLAD-------GCRSSCWWSVRAMIYHQRSLDNI 199
Query: 64 S----SSLYDLLKVLCMIY 78
+ S++ + +++C Y
Sbjct: 200 TPTLKSAISERFQIVCRFY 218
>gi|409079430|gb|EKM79791.1| hypothetical protein AGABI1DRAFT_106158 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 897
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 22 MLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDE 62
+ L T+ LLS LP + TI WW R L+HQ++LDE
Sbjct: 152 IFLRLTQILLS----LPYQYLETIQWWRLRFALVHQQVLDE 188
>gi|387019014|gb|AFJ51625.1| Tetratricopeptide repeat protein 27-like [Crotalus adamanteus]
Length = 846
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 8/52 (15%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLY 68
++ A+++L+ +R+ L I+T+ WW R + +HQ++L+E+S L+
Sbjct: 163 LMLARVILVNSRNKLE--------AIQTLPWWTLRCINLHQQLLEEKSPELF 206
>gi|410955497|ref|XP_003984389.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 27
[Felis catus]
Length = 847
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
++ A+++L+ R L+ I+++ WW R + +HQ++L+ERS L+ L
Sbjct: 165 LLLARVILVNVRHKLT--------AIQSLPWWTLRCVSIHQQLLEERSPQLFAL 210
>gi|126303684|ref|XP_001380792.1| PREDICTED: tetratricopeptide repeat protein 27-like [Monodelphis
domestica]
Length = 953
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
++ A+++L+ R S I+T+ WW R + +HQ++L+ERS L+ +
Sbjct: 271 LLLARVILVNLRHKFSS--------IQTLPWWTLRCVNIHQQLLEERSPELFSI 316
>gi|395507127|ref|XP_003757879.1| PREDICTED: tetratricopeptide repeat protein 27 [Sarcophilus
harrisii]
Length = 842
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 42 IRTISWWLTRLLLMHQRILDERSSSLYDL 70
I+T+ WW R + +HQ++L+ERS L+ L
Sbjct: 177 IQTLPWWTLRCVNIHQQLLEERSPELFSL 205
>gi|195128285|ref|XP_002008594.1| GI13581 [Drosophila mojavensis]
gi|193920203|gb|EDW19070.1| GI13581 [Drosophila mojavensis]
Length = 805
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 20 AKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
A++LL+ + L + + P + + I WW RL+ + Q ILD+ +S+LY+ K+
Sbjct: 126 AQLLLIAKQMLKTLSAAQPAS--KVIWWWRLRLVCLQQHILDDLASALYEEFKL 177
>gi|426192628|gb|EKV42564.1| hypothetical protein AGABI2DRAFT_229114 [Agaricus bisporus var.
bisporus H97]
Length = 895
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 37 LPVNGIRTISWWLTRLLLMHQRILDE 62
LP + TI WW R L+HQ++LDE
Sbjct: 163 LPYKYLETIQWWRLRFALVHQQVLDE 188
>gi|345559788|gb|EGX42920.1| hypothetical protein AOL_s00215g869 [Arthrobotrys oligospora ATCC
24927]
Length = 978
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 41 GIRTISWWLTRLLLMHQRILDERSSSLYD 69
G+ T WW R+ HQRIL E SSSL++
Sbjct: 182 GLITAKWWRVRVNFAHQRILREVSSSLHE 210
>gi|348574580|ref|XP_003473068.1| PREDICTED: tetratricopeptide repeat protein 27-like [Cavia
porcellus]
Length = 847
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
++ A+++L+ R L+ I+++ WW R + +HQ++L+ERS L+ L
Sbjct: 165 LLIARIILVNIRHKLT--------AIQSLPWWTLRCVNIHQQLLEERSPQLFAL 210
>gi|24666194|ref|NP_649026.1| CG5290 [Drosophila melanogaster]
gi|7293921|gb|AAF49283.1| CG5290 [Drosophila melanogaster]
gi|256355232|gb|ACU68947.1| FI02004p [Drosophila melanogaster]
Length = 798
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ + WW RL+ +HQ +LD+ ++SLY+ K
Sbjct: 145 KVLIWWRLRLICLHQHVLDDLAASLYEQFK 174
>gi|54650676|gb|AAV36917.1| RE04643p [Drosophila melanogaster]
Length = 798
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ + WW RL+ +HQ +LD+ ++SLY+ K
Sbjct: 145 KVLIWWRLRLICLHQHVLDDLAASLYEQFK 174
>gi|195379156|ref|XP_002048346.1| GJ13919 [Drosophila virilis]
gi|194155504|gb|EDW70688.1| GJ13919 [Drosophila virilis]
Length = 803
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 20 AKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLLKV 73
A+ LL+ + L + + P + + + WW R++ +HQ ILD+ +S+LY+ K+
Sbjct: 126 AQFLLIAKQMLDTLISAQPTS--KLLCWWRLRVVCLHQHILDDLASALYEQFKL 177
>gi|240995623|ref|XP_002404634.1| tetratricopeptide repeat protein, putative [Ixodes scapularis]
gi|215491636|gb|EEC01277.1| tetratricopeptide repeat protein, putative [Ixodes scapularis]
Length = 834
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 17 IVFAKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLY 68
++ AK L+ R LLS + T WW R +HQ +L +RS SLY
Sbjct: 156 LIVAKAFLLNCRGLLSACS--------TADWWAYRCAFVHQLVLLDRSFSLY 199
>gi|195591217|ref|XP_002085339.1| GD12360 [Drosophila simulans]
gi|194197348|gb|EDX10924.1| GD12360 [Drosophila simulans]
Length = 798
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ + WW RL+ +HQ +LD+ ++SLY+ K
Sbjct: 145 KVLIWWRLRLICLHQHVLDDLAASLYEQFK 174
>gi|195356572|ref|XP_002044734.1| GM11644 [Drosophila sechellia]
gi|194134422|gb|EDW55938.1| GM11644 [Drosophila sechellia]
Length = 798
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 43 RTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ + WW RL+ +HQ +LD+ ++SLY+ K
Sbjct: 145 KVLIWWRLRLICLHQHVLDDLAASLYEQFK 174
>gi|296415626|ref|XP_002837487.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633359|emb|CAZ81678.1| unnamed protein product [Tuber melanosporum]
Length = 929
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 22 MLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDLL 71
+LL + +L+ + + + + T+ WW R+ +HQRIL E +++L++ +
Sbjct: 161 LLLAFGKVVLNSSVLKKDSKLETLPWWRVRVNFLHQRILSEATATLHNAI 210
>gi|74207725|dbj|BAE40106.1| unnamed protein product [Mus musculus]
Length = 847
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 179 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 212
>gi|148706495|gb|EDL38442.1| tetratricopeptide repeat domain 27, isoform CRA_c [Mus musculus]
Length = 855
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 187 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 220
>gi|148706496|gb|EDL38443.1| tetratricopeptide repeat domain 27, isoform CRA_d [Mus musculus]
Length = 846
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 179 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 212
>gi|26326891|dbj|BAC27189.1| unnamed protein product [Mus musculus]
Length = 847
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 179 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 212
>gi|344288761|ref|XP_003416115.1| PREDICTED: tetratricopeptide repeat protein 27 [Loxodonta africana]
Length = 843
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 20 AKMLLMKTRDLLSDATVLPVNGIRTISWWLTRLLLMHQRILDERSSSLYDL 70
A+++L+ R L+ LP WW R + +HQ++L+ERS L+ L
Sbjct: 164 ARVILVNVRHKLTAVQSLP--------WWTLRYVNIHQQLLEERSPQLFAL 206
>gi|164519039|ref|NP_690030.3| tetratricopeptide repeat protein 27 [Mus musculus]
gi|152112334|sp|Q8CD92.2|TTC27_MOUSE RecName: Full=Tetratricopeptide repeat protein 27; Short=TPR repeat
protein 27
Length = 847
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 179 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 212
>gi|26340040|dbj|BAC33683.1| unnamed protein product [Mus musculus]
Length = 847
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 39 VNGIRTISWWLTRLLLMHQRILDERSSSLYDLLK 72
+ ++++ WW R + +HQ++L+ERS L+ L K
Sbjct: 179 LTALQSLPWWTLRYVNIHQQLLEERSPQLFALAK 212
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.141 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,069,851,366
Number of Sequences: 23463169
Number of extensions: 32504744
Number of successful extensions: 78424
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 78351
Number of HSP's gapped (non-prelim): 103
length of query: 78
length of database: 8,064,228,071
effective HSP length: 49
effective length of query: 29
effective length of database: 6,914,532,790
effective search space: 200521450910
effective search space used: 200521450910
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)