BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037392
(389 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356504274|ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 283/392 (72%), Positives = 322/392 (82%), Gaps = 10/392 (2%)
Query: 1 MAARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTW 60
M+ P I ++VNSK G VHPV + + P E+KH +KW +W
Sbjct: 1 MSGEPRPLEIHLRVNSKRGT-----TMVHPVAAAETVEVPIQYPRE--EEVKHYRKWFSW 53
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGA 120
LIP FVVANI MFVITMYVNNCP+NSVSC+A FLGRFSFQPFKENPLLGPSS+TLQKMGA
Sbjct: 54 LIPLFVVANIVMFVITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGA 113
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGF 180
LDVS+VV +HQGWRLITC WLH GVFH+LANML +LVIGIRLEQEFGF+ +GLL++ISGF
Sbjct: 114 LDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGF 173
Query: 181 GGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAV 238
GGSLLSALFIQSNISVGASGALFGLLG MLSELITNW+IY NK LTLV+II INLAV
Sbjct: 174 GGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAV 233
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILW 297
GILPHVDNFAHIGGF++GFLLGFVFLIRPQFGWV QRYA YS + KF YQCILW
Sbjct: 234 GILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILW 293
Query: 298 IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQL 357
+ SL++++VGL++GLV LL+GVDANDHCSWCHYLSCVPTS+WSC TE A+C + Q GNQL
Sbjct: 294 VFSLIILVVGLSVGLVALLQGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCQSNQLGNQL 353
Query: 358 NVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
NVTCSSNGKS+ Y + NP+SSQIQ LCT+LCS
Sbjct: 354 NVTCSSNGKSSTYFMQNPTSSQIQQLCTQLCS 385
>gi|225440378|ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 388
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/392 (75%), Positives = 333/392 (84%), Gaps = 10/392 (2%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVE---EMDRPQGVSAPPPAVYGEIKHSKKWVT 59
AR+ I+I+V SK G N +HPVE P P P VY EIKH KKWV
Sbjct: 2 ARDPSSSIEIRVLSKRGS-----NVIHPVEVDTPPLLPSPSPGPVPVVYREIKHFKKWVP 56
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMG 119
WLIP FVVANI MF ITMYVNNCPKNS+SC+A FLGRFSFQPFKENPLLGPSS TLQKMG
Sbjct: 57 WLIPSFVVANIIMFGITMYVNNCPKNSISCIADFLGRFSFQPFKENPLLGPSSSTLQKMG 116
Query: 120 ALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
ALDVS+VVD+HQGWRLITC WLHGGVFH+LANMLSLLVIGIRLEQEFGF++VGLLY+ISG
Sbjct: 117 ALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISG 176
Query: 180 FGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLA 237
FGGSLLS LFIQ NISVGASGALFGLLG MLSELITNW+IY NK FLTLV+IIAINLA
Sbjct: 177 FGGSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLA 236
Query: 238 VGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILW 297
VGILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGWV Q YA +S + KF TYQCILW
Sbjct: 237 VGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHSTSPKPKFKTYQCILW 296
Query: 298 IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQL 357
+ S++L+I+GLTLGLVMLLRGVDAND CSWCHYLSCVPTS+WSC+TEPA+C + Q GNQL
Sbjct: 297 VASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSCKTEPAYCLSNQIGNQL 356
Query: 358 NVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
N+TCSSNGKS++Y+L++P+SSQIQ LC++LC+
Sbjct: 357 NLTCSSNGKSSIYLLADPTSSQIQGLCSQLCN 388
>gi|363807474|ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycine max]
gi|255644920|gb|ACU22960.1| unknown [Glycine max]
Length = 384
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/386 (72%), Positives = 317/386 (82%), Gaps = 12/386 (3%)
Query: 7 PPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFV 66
P I ++VNSK GG + VHPV V P +KH +KW WLIP FV
Sbjct: 8 PLEIHLRVNSKRGGTT----MVHPVAT-----AVPVQYPREEEGVKHYRKWFAWLIPLFV 58
Query: 67 VANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKV 126
VAN+AMF ITMYVNNCP+NSVSC+A FLGRFSFQPFKENPLLGPSS+TLQKMGALDVS+V
Sbjct: 59 VANVAMFAITMYVNNCPRNSVSCIASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRV 118
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V KHQGWRL+TC WLH GVFH+LANML +LVIGIRLEQEFGF+ +GLL+ ISGFGGSLLS
Sbjct: 119 VHKHQGWRLVTCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFFISGFGGSLLS 178
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
ALFIQSNISVGASGALFGLLG MLSELITNW+IY NK LTLV+II INLAVGILPHV
Sbjct: 179 ALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLAALLTLVIIIVINLAVGILPHV 238
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVL 303
DNFAHIGGF++GFLLGFVFLIRPQFGWV QRYA YS S+ KF YQCILW++SL++
Sbjct: 239 DNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRSKPKFKKYQCILWVLSLII 298
Query: 304 VIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSS 363
++VGL++GLV LLRGVDAND CSWCHYLSCVPTS+WSC TE A+C + Q GNQLNVTCSS
Sbjct: 299 LVVGLSVGLVALLRGVDANDRCSWCHYLSCVPTSKWSCHTEAAYCESNQLGNQLNVTCSS 358
Query: 364 NGKSNLYILSNPSSSQIQSLCTELCS 389
GK + Y + NP+SSQIQ LC++LCS
Sbjct: 359 TGKFSTYFMENPTSSQIQQLCSQLCS 384
>gi|224090695|ref|XP_002309063.1| predicted protein [Populus trichocarpa]
gi|222855039|gb|EEE92586.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/344 (79%), Positives = 308/344 (89%), Gaps = 3/344 (0%)
Query: 48 YGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPL 107
+G+ + KKW WLIP FV+AN+ MF+ITMYVNNCPKN VSC+ARFLGRFSFQPFKENPL
Sbjct: 23 HGKARPFKKWWPWLIPAFVIANVVMFIITMYVNNCPKNYVSCIARFLGRFSFQPFKENPL 82
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS++LQKMGALDV KVVD HQ WRLITCNWLHGGVFH+LANMLSLLVIGIRLEQEFG
Sbjct: 83 LGPSSISLQKMGALDVQKVVDGHQWWRLITCNWLHGGVFHLLANMLSLLVIGIRLEQEFG 142
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
F++VGLLY+ISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY N+ F
Sbjct: 143 FVKVGLLYVISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYANQVAAF 202
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+TLVVIIA+NLA+GILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGW QR A GY S
Sbjct: 203 ITLVVIIAVNLALGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWFSQRRAPLGYIPAS 262
Query: 286 -RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ KF TYQC LWI+SL+L+I GLT+G+V+LLRGVDAN+HCSWCHYLSCVPT +WSC+TE
Sbjct: 263 VKSKFKTYQCALWIISLILLIAGLTIGMVLLLRGVDANEHCSWCHYLSCVPTGKWSCKTE 322
Query: 345 PAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
PA+C +TQ GNQLN+TCSSNGKS++YIL +SSQIQ LCT LC
Sbjct: 323 PAYCLSTQIGNQLNLTCSSNGKSSVYILPGATSSQIQGLCTGLC 366
>gi|449483645|ref|XP_004156648.1| PREDICTED: uncharacterized protein LOC101224387 [Cucumis sativus]
Length = 471
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/390 (69%), Positives = 309/390 (79%), Gaps = 13/390 (3%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
A P IQI S G +HP+E Q + A + E+K +KW+ WLI
Sbjct: 92 AEHHPLDIQIN--------SRQGTAIHPIEA--DGQSLQASGSVAFWEVKQFRKWIPWLI 141
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
P FV+ANI F ITM VNNCPKNSVSC+ARFLGRFSFQ KENPLLGPSS+TL++MGAL+
Sbjct: 142 PSFVIANIVTFFITMSVNNCPKNSVSCIARFLGRFSFQSLKENPLLGPSSLTLRRMGALE 201
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+KVV +Q WRLITC WLH GVFH+LANMLSLLVIGIRLEQEFGFIR+GLLY+ISGFGG
Sbjct: 202 VNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGG 261
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGI 240
SLLS+LFIQSNISVGASGALFGLLG MLSELITNWTIY+NK +TL+VIIAINLAVGI
Sbjct: 262 SLLSSLFIQSNISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTLLVIIAINLAVGI 321
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL-SRRKFMTYQCILWIV 299
LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV QRY S+ + KF YQC+LWI+
Sbjct: 322 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANHKFKIYQCVLWII 381
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNV 359
SL+L+I G T+G+V+L RG DAN HCSWCHYLSCVPTS+WSC +EP +C + Q GNQLN+
Sbjct: 382 SLILLIAGFTVGMVLLSRGFDANRHCSWCHYLSCVPTSKWSCNSEPTYCLSQQVGNQLNL 441
Query: 360 TCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
TCSSNGK YIL N S+S IQ LC+ LC+
Sbjct: 442 TCSSNGKFRTYILPNASNSAIQGLCSSLCN 471
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/365 (75%), Positives = 301/365 (82%), Gaps = 11/365 (3%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVE---EMDRPQGVSAPPPAVYGEIKHSKKWVT 59
AR+ I+I+V SK G N +HPVE P P P VY EIKH KKWV
Sbjct: 2 ARDPSSSIEIRVLSKRGS-----NVIHPVEVDTPPLLPSPSPGPVPVVYREIKHFKKWVP 56
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMG 119
WLIP FVVANI MF ITMYVNNCPKNS+SC+A FLGRFSFQPFKENPLLGPSS TLQKMG
Sbjct: 57 WLIPSFVVANIIMFGITMYVNNCPKNSISCIADFLGRFSFQPFKENPLLGPSSSTLQKMG 116
Query: 120 ALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
ALDVS+VVD+HQGWRLITC WLHGGVFH+LANMLSLLVIGIRLEQEFGF++VGLLY+ISG
Sbjct: 117 ALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISG 176
Query: 180 FGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLA 237
FGGSLLS LFIQ NISVGASGALFGLLG MLSELITNW+IY NK FLTLV+IIAINLA
Sbjct: 177 FGGSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLA 236
Query: 238 VGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILW 297
VGILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGWV Q YA +S + KF TYQCILW
Sbjct: 237 VGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHSTSPKPKFKTYQCILW 296
Query: 298 IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQL 357
+ S++L+I+GLTLGLVMLLRGVDAND CSWCHYLSCVPTS+WSC+TEPA+C +
Sbjct: 297 VASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSCKTEPAYCLMAMAVRAV 356
Query: 358 NVTCS 362
N TCS
Sbjct: 357 N-TCS 360
>gi|297740363|emb|CBI30545.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/320 (81%), Positives = 293/320 (91%), Gaps = 2/320 (0%)
Query: 72 MFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQ 131
MF ITMYVNNCPKNS+SC+A FLGRFSFQPFKENPLLGPSS TLQKMGALDVS+VVD+HQ
Sbjct: 1 MFGITMYVNNCPKNSISCIADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVVDRHQ 60
Query: 132 GWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ 191
GWRLITC WLHGGVFH+LANMLSLLVIGIRLEQEFGF++VGLLY+ISGFGGSLLS LFIQ
Sbjct: 61 GWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSGLFIQ 120
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAH 249
NISVGASGALFGLLG MLSELITNW+IY NK FLTLV+IIAINLAVGILPHVDNFAH
Sbjct: 121 ENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILPHVDNFAH 180
Query: 250 IGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLT 309
IGGF+SGFLLGFVFLIRPQFGWV Q YA +S + KF TYQCILW+ S++L+I+GLT
Sbjct: 181 IGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHSTSPKPKFKTYQCILWVASVILLIIGLT 240
Query: 310 LGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNL 369
LGLVMLLRGVDAND CSWCHYLSCVPTS+WSC+TEPA+C + Q GNQLN+TCSSNGKS++
Sbjct: 241 LGLVMLLRGVDANDRCSWCHYLSCVPTSKWSCKTEPAYCLSNQIGNQLNLTCSSNGKSSI 300
Query: 370 YILSNPSSSQIQSLCTELCS 389
Y+L++P+SSQIQ LC++LC+
Sbjct: 301 YLLADPTSSQIQGLCSQLCN 320
>gi|449440331|ref|XP_004137938.1| PREDICTED: uncharacterized protein LOC101206123 [Cucumis sativus]
Length = 397
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 270/390 (69%), Positives = 309/390 (79%), Gaps = 13/390 (3%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
A P IQI S G +HP+E Q + A + E+K +KW+ WLI
Sbjct: 18 AEHHPLDIQIN--------SRQGTAIHPIEA--DGQSLQASGSVAFWEVKQFRKWIPWLI 67
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
P FV+ANI F ITM VNNCPKNSVSC+ARFLGRFSFQ KENPLLGPSS+TL++MGAL+
Sbjct: 68 PSFVIANIVTFFITMSVNNCPKNSVSCIARFLGRFSFQSLKENPLLGPSSLTLRRMGALE 127
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+KVV +Q WRLITC WLH GVFH+LANMLSLLVIGIRLEQEFGFIR+GLLY+ISGFGG
Sbjct: 128 VNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGG 187
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGI 240
SLLS+LFIQSNISVGASGALFGLLG MLSELITNWTIY+NK +TL+VIIAINLAVGI
Sbjct: 188 SLLSSLFIQSNISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTLLVIIAINLAVGI 247
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL-SRRKFMTYQCILWIV 299
LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV QRY S+ + KF YQC+LWI+
Sbjct: 248 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANHKFKIYQCVLWII 307
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNV 359
SL+L+I G T+G+V+L RG DAN HCSWCHYLSCVPTS+WSC +EP +C + Q GNQLN+
Sbjct: 308 SLILLIAGFTVGMVLLSRGFDANRHCSWCHYLSCVPTSKWSCNSEPTYCLSQQVGNQLNL 367
Query: 360 TCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
TCSSNGK YIL N S+S IQ LC+ LC+
Sbjct: 368 TCSSNGKFRTYILPNASNSAIQGLCSSLCN 397
>gi|225434919|ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 391
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/396 (65%), Positives = 319/396 (80%), Gaps = 18/396 (4%)
Query: 5 ESPP--GIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGV---SAPPPA---VYGEIKHSKK 56
PP I+IK++ + N VHP + P G+ SAPP ++ E + K+
Sbjct: 3 SDPPSSNIEIKIHPRR-----QDNVVHPA--VPSPMGIPAASAPPRQQQHLFSEFRPFKR 55
Query: 57 WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQ 116
W W++P FVVANIAMF+ITM++NNCPKNSVSCVA FLGRFSFQP KENPLLGPSS TL+
Sbjct: 56 WFPWMVPTFVVANIAMFLITMFINNCPKNSVSCVADFLGRFSFQPLKENPLLGPSSSTLE 115
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
KMGAL+VSKVV +HQ WRLI+C WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY+
Sbjct: 116 KMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYV 175
Query: 177 ISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAI 234
+SGFGGS+LS+LFIQS+ISVGASGALFGLLG MLSELITNWTIY NK LTL++II +
Sbjct: 176 VSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIV 235
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQ 293
NLAVGILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGWV QR A G+ A S + K YQ
Sbjct: 236 NLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQ 295
Query: 294 CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQD 353
+LW++SL+L+ VG T+G+VMLLRGV ND CSWCHYLSCVPTS+WSC+++ +C +T
Sbjct: 296 YVLWVMSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTI 355
Query: 354 GNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
GNQLN+TC SNG+SN+Y+L + ++SQ+Q LC++LC+
Sbjct: 356 GNQLNLTCLSNGRSNIYLLPDDNTSQVQQLCSQLCN 391
>gi|147818034|emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
Length = 391
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/396 (65%), Positives = 318/396 (80%), Gaps = 18/396 (4%)
Query: 5 ESPP--GIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGV---SAPPPA---VYGEIKHSKK 56
PP I+IK++ + N VHP + P G+ SAPP ++ E + K+
Sbjct: 3 SDPPSSNIEIKIHPRR-----QDNVVHPA--VPSPMGIPAASAPPRQQQHLFSEFRPFKR 55
Query: 57 WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQ 116
W W++P FVVANIAMF+ITM++NNCPKNSVSCVA FLGRFSFQP KENPLLGPSS TL+
Sbjct: 56 WFPWMVPTFVVANIAMFLITMFINNCPKNSVSCVADFLGRFSFQPLKENPLLGPSSSTLE 115
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
KMGAL+VSKVV +HQ WRLI+C WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY+
Sbjct: 116 KMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYV 175
Query: 177 ISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAI 234
+SGFGGS+LS+LFIQS+ISVGASGALFGLLG MLSELITNWTIY NK LTL++II +
Sbjct: 176 VSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIV 235
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQ 293
NLAVGILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGWV QR A G+ A S + K YQ
Sbjct: 236 NLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAXSVKPKHKMYQ 295
Query: 294 CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQD 353
+LW++SL+L+ VG T+G+VMLLRGV ND CSWCHYLSCVPTS+WSC+++ +C +T
Sbjct: 296 YVLWVMSLILLTVGFTVGMVMLLRGVXGNDXCSWCHYLSCVPTSKWSCKSQQVYCESTTI 355
Query: 354 GNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
GNQLN+TC SNG+SN+Y+L + +SQ+Q LC++LC+
Sbjct: 356 GNQLNLTCLSNGRSNIYLLPDDXTSQVQQLCSQLCN 391
>gi|449455106|ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449473549|ref|XP_004153913.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449508492|ref|XP_004163327.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 383
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/390 (66%), Positives = 307/390 (78%), Gaps = 11/390 (2%)
Query: 3 ARESP-PGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWL 61
AR+ P GI+IKV+S+ G + V P RP G S P +G+ + KKWV WL
Sbjct: 2 ARDKPTAGIEIKVHSRHG-----EHEVQPAAARSRPSGTS---PIEFGQYRPFKKWVPWL 53
Query: 62 IPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGAL 121
+P FVVAN MF I+MYVN+CPKNS SC+ RFLGRFSFQP KENPLLGPSS TL+KMGAL
Sbjct: 54 VPVFVVANSVMFTISMYVNDCPKNSASCIGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 113
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
+V KVV HQ WRLI+C WLH GVFHILANMLSL+ IGIRLEQEFGF+R+G+LYI+SGFG
Sbjct: 114 EVDKVVYGHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFG 173
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
GSL+SALFIQS ISVGASGALFGLLG MLSEL+TNWTIY NK LTL+ II INLAVG
Sbjct: 174 GSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVG 233
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIV 299
+LPHVDNFAHIGGFISGFLLGFVFL+RPQFGWV QR A G S+ S+ K+ YQ +LW+V
Sbjct: 234 VLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNSSTSKSKYKPYQYVLWVV 293
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNV 359
SLVL+I G +GLV L RG + ND CSWCHYLSC+PTS+WSC ++ C T+Q GNQLN+
Sbjct: 294 SLVLLIAGFAVGLVFLFRGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNM 353
Query: 360 TCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
TC SNG+S Y L+N SS++ + +C++LCS
Sbjct: 354 TCLSNGRSGSYSLTNSSSTEAEKICSQLCS 383
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/389 (62%), Positives = 297/389 (76%), Gaps = 5/389 (1%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
AR+ G++IKV + + + N + A + E + K W WL+
Sbjct: 2 ARDRREGLEIKVVNPPA--AATNNVAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLV 59
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
P VVANIA+F I+M++NNCPKNS C+ARFLGRF+FQP KENPLLGPSS+TL+KMGALD
Sbjct: 60 PAIVVANIALFAISMFINNCPKNSAYCLARFLGRFAFQPMKENPLLGPSSLTLEKMGALD 119
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
VS VV KH+ WRL TC WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY+ISGFGG
Sbjct: 120 VSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGG 179
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGI 240
SLLS+LF ++ ISVGASGALFGLLG+MLSEL+TNWTIY NK LTL+ IIAINLAVGI
Sbjct: 180 SLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGI 239
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQCILWIV 299
LPHVDNFAH+GGF SGFLLGFVFLIRPQ+G+ QR GY+A S + K YQ +LWI
Sbjct: 240 LPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWIT 299
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNV 359
SLVL+I G T GLV+LLRG D N HCSWCHYLSC+PTS WSC+++ +C ++Q G Q+N+
Sbjct: 300 SLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCKSQNVYCESSQIGQQMNL 359
Query: 360 TCSSNGKSNLYILSNPSSSQIQSLCTELC 388
TC +NGK+ +Y LSN S+IQ LC++LC
Sbjct: 360 TCITNGKTEMYKLSNDIPSRIQQLCSQLC 388
>gi|356566513|ref|XP_003551475.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/393 (61%), Positives = 299/393 (76%), Gaps = 12/393 (3%)
Query: 1 MAARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTW 60
M P +Q++VNS+ V V M+ ++ + E+KH K+W W
Sbjct: 1 MEGELQPSQVQLRVNSR------QWRKVVNVHSMEIDPSFTSK--VEHREVKHFKEWFPW 52
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGA 120
LIP FV+AN+ +F+ITMYVN+C K +C+A FLGRFSFQPF ENPLLGPS +TL+KMGA
Sbjct: 53 LIPFFVIANVIVFIITMYVNDCSKTLATCIAPFLGRFSFQPFNENPLLGPSLITLRKMGA 112
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGF 180
LD +KVV +HQGWRLITC WLHGGVFH++ANM LLV+GI+LE+EFGF+ +GLL++ISGF
Sbjct: 113 LDANKVVHRHQGWRLITCMWLHGGVFHLVANMFGLLVVGIQLEKEFGFVLIGLLFVISGF 172
Query: 181 GGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAV 238
GGSLLSALFI +SVGASGALFGLLG MLSEL+TNW++Y K T V +IAINLAV
Sbjct: 173 GGSLLSALFIGEKVSVGASGALFGLLGGMLSELLTNWSLYEKKLGALFTFVFVIAINLAV 232
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILW 297
G+LPHVDNFAHIGGF+SGFLLGFVFLIRPQFGW++QR A YS L + KF YQCI W
Sbjct: 233 GVLPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWIKQRNAPQPYSPTLIKPKFNKYQCISW 292
Query: 298 IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR-TEPAFCSTTQDGNQ 356
I++L+L+IVG T GL+ LLRG+DAND+CSWCHYLSCVPTSRW+C + + C T Q GNQ
Sbjct: 293 ILALILLIVGFTTGLIALLRGIDANDYCSWCHYLSCVPTSRWNCNPPKSSSCVTEQIGNQ 352
Query: 357 LNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
LN+ CSSNGKS+ Y + NP+ QI LC +LC+
Sbjct: 353 LNLICSSNGKSSTYYMQNPTDPQIYELCAQLCT 385
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/389 (62%), Positives = 296/389 (76%), Gaps = 7/389 (1%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
AR+ G++IKV + + N V P A + E + K W WL+
Sbjct: 2 ARDRREGLEIKVVNP----PAATNNVSPETSPATATRRRRQQRASFAEFRPFKLWFPWLV 57
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
P VVANIA+F I+M++NNCPKNS C ARFLGRF+FQP KENPLLGPSS+TL+KMGALD
Sbjct: 58 PAIVVANIALFAISMFINNCPKNSAYCSARFLGRFAFQPMKENPLLGPSSLTLEKMGALD 117
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
VS VV KH+ WRL TC WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY+ISGFGG
Sbjct: 118 VSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGG 177
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGI 240
SLLS+LF ++ ISVGASGALFGLLG+MLSEL+TNWTIY NK LTL+ IIAINLAVGI
Sbjct: 178 SLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGI 237
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQCILWIV 299
LPHVDNFAH+GGF SGFLLGFVFLIRPQ+G+ QR Y+A S + K YQ +LWI
Sbjct: 238 LPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRSYAAPSAKSKHKPYQYVLWIT 297
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNV 359
SL+L+I G T+GLV+LLRG D N HCSWCHYLSC+PTS WSC+++ +C ++Q G Q+N+
Sbjct: 298 SLLLLIAGYTVGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCKSQNDYCESSQIGQQMNL 357
Query: 360 TCSSNGKSNLYILSNPSSSQIQSLCTELC 388
TC +NGK+ +Y LSN S++Q LC++LC
Sbjct: 358 TCIANGKTEMYKLSNDIPSRVQQLCSQLC 386
>gi|255584755|ref|XP_002533096.1| KOM, putative [Ricinus communis]
gi|223527108|gb|EEF29288.1| KOM, putative [Ricinus communis]
Length = 408
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/401 (64%), Positives = 302/401 (75%), Gaps = 24/401 (5%)
Query: 9 GIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGV-SAPPPAVY-----------GEIKHSKK 56
GI++ + + GG N VHPV + P S P P V GE + ++
Sbjct: 12 GIKVHHHPRRGGD----NVVHPVGQSPPPLSKGSTPLPVVASHNQQQNVSSAGEFRPFRR 67
Query: 57 WVTWLIPCFVVANIAMFVITMYVNNCPKNSV---SCVARFLGRFSFQPFKENPLLGPSSV 113
W+ WL+P FV AN+ +FV TMYVNNCP NS+ SC+A+FLGRFSFQP KENPLLGPSS
Sbjct: 68 WLPWLVPLFVGANVVLFVTTMYVNNCPSNSMKPESCIAKFLGRFSFQPMKENPLLGPSSS 127
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL+KMGALDV KVVD HQ WRL++C WLH GVFHILANMLSL+ IGIRLEQEFGFIR+GL
Sbjct: 128 TLEKMGALDVDKVVDGHQAWRLLSCMWLHAGVFHILANMLSLVFIGIRLEQEFGFIRIGL 187
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+Y+ISGFGGSLLSALFIQSNISVGASGALFGLLG MLSELITNWTIY NK LTLV+I
Sbjct: 188 VYVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWTIYANKLAALLTLVLI 247
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSA-LSRRKFM 290
I INLAVGILPHVDNFAHIGGF SGFLLGFVFLIRPQFGWV Q+ GY A ++ K
Sbjct: 248 IIINLAVGILPHVDNFAHIGGFFSGFLLGFVFLIRPQFGWVNQKACPPGYIAPPAKSKHK 307
Query: 291 TYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCST 350
TYQ +LW+VS++L+IVG +GLV LLRG + NDHCSWCHY+SCVPTS WSC++ C+
Sbjct: 308 TYQYVLWVVSVILLIVGFAVGLVTLLRGTNLNDHCSWCHYMSCVPTSLWSCKSSRVDCNL 367
Query: 351 TQDGNQLNVTCSSNGKSNLYILSNPS--SSQIQSLCTELCS 389
+Q GN+LN+TC S GKS++ LS S Q LC +LCS
Sbjct: 368 SQFGNELNITCISTGKSHVLSLSADGALSQSQQELCVQLCS 408
>gi|297746062|emb|CBI16118.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/316 (72%), Positives = 275/316 (87%), Gaps = 3/316 (0%)
Query: 77 MYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLI 136
M++NNCPKNSVSCVA FLGRFSFQP KENPLLGPSS TL+KMGAL+VSKVV +HQ WRLI
Sbjct: 1 MFINNCPKNSVSCVADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQVWRLI 60
Query: 137 TCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISV 196
+C WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY++SGFGGS+LS+LFIQS+ISV
Sbjct: 61 SCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQSSISV 120
Query: 197 GASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFI 254
GASGALFGLLG MLSELITNWTIY NK LTL++II +NLAVGILPHVDNFAHIGGF+
Sbjct: 121 GASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILPHVDNFAHIGGFV 180
Query: 255 SGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQCILWIVSLVLVIVGLTLGLV 313
SGFLLGFVFLIRPQFGWV QR A G+ A S + K YQ +LW++SL+L+ VG T+G+V
Sbjct: 181 SGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLILLTVGFTVGMV 240
Query: 314 MLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILS 373
MLLRGV ND CSWCHYLSCVPTS+WSC+++ +C +T GNQLN+TC SNG+SN+Y+L
Sbjct: 241 MLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQLNLTCLSNGRSNIYLLP 300
Query: 374 NPSSSQIQSLCTELCS 389
+ ++SQ+Q LC++LC+
Sbjct: 301 DDNTSQVQQLCSQLCN 316
>gi|356557429|ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 389
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/343 (67%), Positives = 278/343 (81%), Gaps = 8/343 (2%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV--SCVARFLGRFSFQPFKENPLLGPSS 112
K+W WL+P FVVANI +F++TMY+N+CPK+S SCVA FLGRFSFQP KENPL GPSS
Sbjct: 47 KRWFPWLVPTFVVANIVVFIVTMYINDCPKHSFYGSCVASFLGRFSFQPLKENPLFGPSS 106
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
TL+KMGAL+V KV+ +HQ WRL +C WLHGGV H+LANMLSL+ IGIRLEQEFGF+R+G
Sbjct: 107 STLEKMGALEVGKVIHRHQVWRLFSCIWLHGGVVHLLANMLSLVFIGIRLEQEFGFVRIG 166
Query: 173 LLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVV 230
LY+ISGFGGSLLSALFIQ ISVGASGALFGLLG MLSEL+ NWTIY NK LTL+V
Sbjct: 167 FLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIYANKFAALLTLIV 226
Query: 231 IIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS---RR 287
I+ INLAVGILPHVDNFAHIGGF+SGFLLGF+FLIRPQF WV R+ S SA + +
Sbjct: 227 IVVINLAVGILPHVDNFAHIGGFVSGFLLGFIFLIRPQFKWVSSRHRNSHSSAAAPSVKY 286
Query: 288 KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
K YQ LW++S +L+I GL GLV+LLR + ND CSWCHYLSC+PTS+WSC+++ +
Sbjct: 287 KHKPYQYALWVISFILLIAGLVTGLVLLLRSANLNDRCSWCHYLSCIPTSKWSCKSQQLY 346
Query: 348 CSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQI-QSLCTELCS 389
C +TQ GNQLN+TC SNG+S+++ LSN S+S+ Q LC+ LCS
Sbjct: 347 CESTQIGNQLNITCLSNGRSDMFPLSNTSTSEAQQQLCSRLCS 389
>gi|357454153|ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
gi|355486405|gb|AES67608.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
Length = 383
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/345 (65%), Positives = 279/345 (80%), Gaps = 6/345 (1%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV--SCVARFLGRFSFQPFKENPL 107
+ + K+WV WLIP FV AN+ +F+ TMYVN+CP+N+ +CVA FLGRFSFQP KENPL
Sbjct: 37 DFRLFKQWVPWLIPTFVFANVVVFIFTMYVNDCPENAFHGTCVAPFLGRFSFQPLKENPL 96
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
GPSS TLQKMGAL+V KVV +H+GWRL++C WLHGG H+LANMLSLL IGIRLEQEFG
Sbjct: 97 FGPSSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFG 156
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
F+R+G LY+ISGFGGSLLS+LFIQ+ ISVGASGALFGLLG MLSEL NWTIY NK
Sbjct: 157 FVRIGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAAL 216
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
LTL++I+ INLAVG+LPHVDNFAH+GGF SGF LGFV LIRPQF W+ Q+ + SG A S
Sbjct: 217 LTLIIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAFS 276
Query: 286 --RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
+ K++ YQ +LW++S +L+I G G+V+L RGV+ N+ CSWCHYLSCVPTS+WSC+
Sbjct: 277 VKQNKYLPYQYVLWVLSFLLLIAGFIAGMVLLFRGVNLNERCSWCHYLSCVPTSKWSCQE 336
Query: 344 EPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
+ +C TT+ GNQLN+TC SNG+S++Y LSN SSS Q LC++LC
Sbjct: 337 QSIYCETTEFGNQLNITCMSNGRSDIYPLSNTSSSDRQQLCSQLC 381
>gi|30693911|ref|NP_850698.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|332645622|gb|AEE79143.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 394
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/340 (67%), Positives = 274/340 (80%), Gaps = 6/340 (1%)
Query: 51 IKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGP 110
+K + W WLIPCFVVAN+A+FVITMYVNNCPK S C A FLGRFSFQ +ENPLLGP
Sbjct: 58 VKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGP 117
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
SS+TLQ MG LDV KVV +GWRL++CNWLHGGV H+L NML+LL IGIR+E+EFGFIR
Sbjct: 118 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIR 177
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTL 228
+GLLY+ISGFGGS+LSALF++SNISVGASGA+FGLLG MLSE+ NWTIY+NK +TL
Sbjct: 178 IGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTL 237
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
V+I+A+NL +G+LP VDNFAHIGGF +GFLLGFV LIRP +GW+ QR +G A R
Sbjct: 238 VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPGAKPHR- 293
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
F YQ ILW +SL++++ G +GL+ L VD N+HCSWCHYLSCVPTS+WSC EPA C
Sbjct: 294 FKIYQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASC 353
Query: 349 STTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
+TTQ GNQL++TC NGKS YIL+NPS S+I SLC +LC
Sbjct: 354 TTTQLGNQLSMTCLRNGKSASYILANPSDSRINSLCVQLC 393
>gi|356547255|ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 392
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/343 (66%), Positives = 277/343 (80%), Gaps = 8/343 (2%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV--SCVARFLGRFSFQPFKENPLLGPSS 112
K+W WL+P FVVANI +F++TMY+N+CP +S SCVA FLGRFSFQP KENPLLGPSS
Sbjct: 50 KRWFPWLVPTFVVANIVVFIVTMYINDCPNHSFYGSCVASFLGRFSFQPLKENPLLGPSS 109
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
TL+KMGAL+V KV+ HQ WRL +C WLHGGV H+LANMLSL+ IGIRLEQEFGF+R+G
Sbjct: 110 STLEKMGALEVGKVIHGHQVWRLFSCIWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIG 169
Query: 173 LLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVV 230
LY+ISGFGGSLLSALFIQ ISVGASGALFGLLG MLSEL+ NWTIY NK LTL+V
Sbjct: 170 FLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIYANKFAALLTLIV 229
Query: 231 IIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS---RR 287
I+ INLA+G+LPHVDNFAHIGGF+SGF LGF+FLIRPQF WV R+ S +A + +
Sbjct: 230 IVVINLAIGVLPHVDNFAHIGGFVSGFFLGFIFLIRPQFKWVSSRHRNSHSTAAAPSVKY 289
Query: 288 KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
K YQ LW++S +L+I GL GLV+LLRGV+ ND CSWCHYLSCVPTS+WSC+++ +
Sbjct: 290 KHKPYQYALWVISFILLIAGLVTGLVLLLRGVNLNDRCSWCHYLSCVPTSKWSCKSQQLY 349
Query: 348 CSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQI-QSLCTELCS 389
C +TQ NQLN+TC SNG+S+++ LS+ SS + Q LC++LCS
Sbjct: 350 CESTQIRNQLNITCLSNGRSHMFPLSDISSLEAQQQLCSQLCS 392
>gi|224054696|ref|XP_002298351.1| predicted protein [Populus trichocarpa]
gi|222845609|gb|EEE83156.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/328 (68%), Positives = 263/328 (80%), Gaps = 6/328 (1%)
Query: 20 GGSGSGNTVHPVE-EMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMY 78
G G+GN + ++ R V +PPP Y KKWV WL+P FVV+NIA+F+ MY
Sbjct: 3 GREGAGNDIVEIKVHPRRENNVGSPPP--YQNKAVFKKWVPWLVPLFVVSNIAVFIAVMY 60
Query: 79 VNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITC 138
VN+CP NS SCVA LGRFSFQP KENPLLGPSS TL KMGALDV++VV+KHQ WRLI+C
Sbjct: 61 VNDCPTNSGSCVAPSLGRFSFQPLKENPLLGPSSSTLVKMGALDVARVVNKHQSWRLISC 120
Query: 139 NWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGA 198
WLH GVFH++ANMLSLL+IGIRLEQEFGF R+GL+Y+ISGFGGSLLSALFIQ+ ISVGA
Sbjct: 121 IWLHAGVFHVVANMLSLLLIGIRLEQEFGFFRIGLVYVISGFGGSLLSALFIQTGISVGA 180
Query: 199 SGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISG 256
SGALFGLLG MLSELITNWTIY NK TL+ IIAINLAVG+LPHVDN+AHIGGF+SG
Sbjct: 181 SGALFGLLGGMLSELITNWTIYANKSAALTTLLCIIAINLAVGLLPHVDNYAHIGGFLSG 240
Query: 257 FLLGFVFLIRPQFGWVEQRYALSGYSA-LSRRKFMTYQCILWIVSLVLVIVGLTLGLVML 315
F LGFVFLIRPQF W+ Q+ GY A ++ K YQ +LW+VSL+++I+G TLG+V L
Sbjct: 241 FFLGFVFLIRPQFKWINQKACPPGYIAPPAKSKHKAYQYVLWVVSLIVIIIGFTLGMVAL 300
Query: 316 LRGVDANDHCSWCHYLSCVPTSRWSCRT 343
LRGV+ NDHCSWCHYLSCVPTS WSC +
Sbjct: 301 LRGVNVNDHCSWCHYLSCVPTSLWSCNS 328
>gi|297820116|ref|XP_002877941.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323779|gb|EFH54200.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/377 (61%), Positives = 283/377 (75%), Gaps = 14/377 (3%)
Query: 22 SGSGNTVHPVE----EMDRPQGVSAPPPAVYGE----IKHSKKWVTWLIPCFVVANIAMF 73
S + N +HP++ + Q + Y E +K + W +WLIPCFVVAN+ +F
Sbjct: 20 SSNNNNIHPMDLESSSLSGQQRSLNRSRSSYEERGRGVKEFRSWFSWLIPCFVVANVVVF 79
Query: 74 VITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW 133
VITMYVNNCPK S C A FLGRFSFQ +ENPLLGPSS+TLQ MG LDV KVV +GW
Sbjct: 80 VITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGW 139
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RL++CNWLHGGV H+L NML+LL IGIR+E+EFGFIR+GLLY+ISGFGGS+LSALF++SN
Sbjct: 140 RLLSCNWLHGGVVHLLVNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSN 199
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIG 251
ISVGASGA+FGLLG MLSE+ NWTIY+NK +TLV+I+A+NL +G+LP VDNFAHIG
Sbjct: 200 ISVGASGAVFGLLGGMLSEIFINWTIYSNKIVTIITLVIIVAVNLGLGVLPGVDNFAHIG 259
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
GF +GFLLGFV LIRP +GW+ QR A +F YQ ILW +SL+L++ G G
Sbjct: 260 GFSTGFLLGFVLLIRPHYGWINQRNA----PGAKPHRFKMYQGILWTISLLLLVAGFITG 315
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYI 371
L+ L VD N HCSWCHYLSC+PTS+WSC EPA C+TTQ GNQL++TC NGKS YI
Sbjct: 316 LISLFNNVDGNKHCSWCHYLSCIPTSKWSCNREPASCTTTQLGNQLSMTCLRNGKSASYI 375
Query: 372 LSNPSSSQIQSLCTELC 388
L+NPS S+I SLC +LC
Sbjct: 376 LANPSDSRINSLCVQLC 392
>gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa Japonica Group]
gi|62733172|gb|AAX95289.1| Rhomboid family, putative [Oryza sativa Japonica Group]
gi|77552712|gb|ABA95509.1| rhomboid family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645769|dbj|BAF28910.1| Os11g0704800 [Oryza sativa Japonica Group]
Length = 374
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/341 (61%), Positives = 261/341 (76%), Gaps = 4/341 (1%)
Query: 53 HSKKWVTWLIPCFVVANIAMFVITMYVNNCPK-NSVSCVARFLGRFSFQPFKENPLLGPS 111
+ ++W W++ ++ + +F+++MYVN+CP+ NS C A FLGRF+FQP KENPLLGPS
Sbjct: 34 YYRRWTPWIVAAIALSCVVVFLVSMYVNDCPRRNSGDCAAGFLGRFAFQPLKENPLLGPS 93
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
S TL KMGALDV+KVV HQGWRLITC WLH GV H+L NML LL IGIRLEQEFGF+R+
Sbjct: 94 SATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRI 153
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
GL+Y+ISG GGSL+SALFI+S+ISVGASGALFGL+GSMLSELITNW++Y NK LTLV
Sbjct: 154 GLVYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLV 213
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRK 288
+I +NLA+GILP VDNFAHIGG ISGFLLGFV IRPQF W+ QR G A +RK
Sbjct: 214 FVIVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRK 273
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
TYQ ILW+ + +++IVG T+ +V+LLRG +ANDHCSWCHYLSCVPT RW C + P +C
Sbjct: 274 HKTYQYILWLAAAIMLIVGFTVAIVLLLRGYNANDHCSWCHYLSCVPTKRWKCNSSPTYC 333
Query: 349 STTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
+ Q N LN+TC Y++++ + +I LC +LCS
Sbjct: 334 TVMQQANTLNLTCEGTNVHRSYLIADATQDKINQLCNQLCS 374
>gi|357155676|ref|XP_003577199.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 383
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/372 (58%), Positives = 269/372 (72%), Gaps = 5/372 (1%)
Query: 23 GSGNTVHPVEEMDRPQGVSAPP-PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNN 81
G G VE RP+ P P + ++W W++P VA +A F++TM+VN+
Sbjct: 12 GPGAVEVRVERPPRPERPQMRPHPGRLRARPYYRRWTPWVVPAASVACVAAFLVTMFVND 71
Query: 82 CPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNW 140
CP+ V C A FLGRF+FQP +ENPLLGPSS TL KMGALDVSK+V QGWRLITC W
Sbjct: 72 CPRRGVGDCSASFLGRFAFQPLRENPLLGPSSATLLKMGALDVSKIVQGRQGWRLITCIW 131
Query: 141 LHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASG 200
LH GV H+L N+L LL IGIRLEQEFGF+R+GL+Y+ISGFGGSL+SALFI+S+ISVGASG
Sbjct: 132 LHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRSSISVGASG 191
Query: 201 ALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
ALFGL+GSMLSELITNW++Y NK LTLV +I +NLA+GILP VDNFAHIGG ISGFL
Sbjct: 192 ALFGLIGSMLSELITNWSLYANKVAALLTLVFVIVVNLALGILPRVDNFAHIGGLISGFL 251
Query: 259 LGFVFLIRPQFGWVEQRYALSGY-SALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
LGFV IRPQF W+ Q+ G +A +RK TYQ ILW+ ++VL+IVG T+ +V+L R
Sbjct: 252 LGFVVFIRPQFAWINQKRVAPGQETAPVKRKHKTYQYILWLAAVVLLIVGFTVAIVLLFR 311
Query: 318 GVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSS 377
G +ANDHCSWCHYLSCVPT +W C + P C+ Q N L++TC G + Y ++ +
Sbjct: 312 GYNANDHCSWCHYLSCVPTKKWKCNSSPQTCTVMQQPNTLDLTCDGTGTHHSYSIAGATQ 371
Query: 378 SQIQSLCTELCS 389
QI LC LCS
Sbjct: 372 DQISQLCNSLCS 383
>gi|224074883|ref|XP_002304474.1| predicted protein [Populus trichocarpa]
gi|222841906|gb|EEE79453.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/319 (67%), Positives = 262/319 (82%), Gaps = 9/319 (2%)
Query: 31 VEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV--- 87
+E + +G +A P+ Y E K+W +W+IP FVVANIA+F++ MYVN+CPK S+
Sbjct: 6 LERGTKNRGNNANFPSYYVETA-EKQWTSWIIPMFVVANIAVFIVVMYVNDCPKKSLGIE 64
Query: 88 -SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVF 146
SCVA+FLGRFSFQP KENPL GPS+ TL+KMGAL+ +KVV HQGWRLITC WLH GV
Sbjct: 65 GSCVAKFLGRFSFQPLKENPLFGPSAATLEKMGALEWNKVVHGHQGWRLITCMWLHAGVV 124
Query: 147 HILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLL 206
H+LANMLSL+ IGIRLEQ+FGF+RVG++Y++SGFGGS+LS+LFIQ NISVGASGALFGLL
Sbjct: 125 HVLANMLSLIFIGIRLEQQFGFVRVGIIYLVSGFGGSILSSLFIQQNISVGASGALFGLL 184
Query: 207 GSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
G+MLSEL+TNWTIY+NK LTLVVIIAINLAVGILPHVDNFAHIGGF+SGFLLGFVFL
Sbjct: 185 GAMLSELLTNWTIYSNKIAALLTLVVIIAINLAVGILPHVDNFAHIGGFMSGFLLGFVFL 244
Query: 265 IRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDH 324
+RPQFGW E R++ + S+ K YQ +L + + VL+IVG TL LVML +G + NDH
Sbjct: 245 LRPQFGWAENRHSPADARVKSKHK--AYQYVLMLAAAVLLIVGFTLALVMLFKGENGNDH 302
Query: 325 CSWCHYLSCVPTSRWSCRT 343
CSWCHYLSCVPTS+W+CR+
Sbjct: 303 CSWCHYLSCVPTSKWNCRS 321
>gi|226494277|ref|NP_001151264.1| membrane protein [Zea mays]
gi|195645390|gb|ACG42163.1| membrane protein [Zea mays]
Length = 414
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/423 (55%), Positives = 295/423 (69%), Gaps = 43/423 (10%)
Query: 1 MAARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKK---- 56
M R + I V S GGG P E R G P +G +
Sbjct: 1 MPRRGETAVVPIDVASAGGGRGDE----RPKRERXRSHG-----PGRHGPHRSRPPPPPP 51
Query: 57 --------WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSC------------------V 90
W +L+P F+VANI +FV+TMYVN+CP ++ + +
Sbjct: 52 PAFRPFRRWFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWL 111
Query: 91 ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
A LGRF+FQ FKENPL+GPSS TL +MGAL+ SKV H+GWRLITC WLH GV HILA
Sbjct: 112 APELGRFAFQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILA 171
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML 210
NMLSLL+IGIRLE+EFGFIR+G LY+ISG GGSLLS+LF+ SNISVGASGALFGLLGSML
Sbjct: 172 NMLSLLMIGIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSML 231
Query: 211 SELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
SELITNWTIY NK LTLV+II INLAVGILPHVDNFAH+GGF+SGF LGFV L+RPQ
Sbjct: 232 SELITNWTIYENKFAALLTLVMIILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQ 291
Query: 269 FGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSW 327
FG++ Q+ + G+ +++RKF TYQ IL ++S ++++ G T+GLV+L +G +A++HCSW
Sbjct: 292 FGYINQKNSPLGFPMGVTKRKFKTYQVILLVISTMILVSGFTIGLVLLFQGFNASEHCSW 351
Query: 328 CHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQ-IQSLCTE 386
CHY+SCVPTS+WSC +C ++Q GNQLN+TC S GK+ Y+LS+P++S+ I++LC
Sbjct: 352 CHYMSCVPTSKWSCNAPNNYCMSSQLGNQLNLTCESTGKTASYVLSDPNNSEAIKNLCVG 411
Query: 387 LCS 389
LCS
Sbjct: 412 LCS 414
>gi|357134029|ref|XP_003568622.1| PREDICTED: uncharacterized protein LOC100834911 [Brachypodium
distachyon]
Length = 417
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/375 (59%), Positives = 285/375 (76%), Gaps = 22/375 (5%)
Query: 37 PQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARF--- 93
PQ + P E + ++W +L+P F+VANIA+FV+TMY N+CP ++ + A
Sbjct: 43 PQHRNGGHPQPPQEFRPFRRWFPFLVPLFIVANIALFVLTMYENDCPAHAAAAGAAIGGS 102
Query: 94 ---------------LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITC 138
LGRF+FQ ++ENPL+GPSS TL KMGAL+ SKV H+GWRLITC
Sbjct: 103 VGGAGAAQGCLLEPELGRFAFQSYRENPLVGPSSATLLKMGALETSKVAKDHEGWRLITC 162
Query: 139 NWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGA 198
WLH GV HILANMLSLL+IGIRLE+EFGF+R+G LY+ISG GGSLLSALF+ SNISVGA
Sbjct: 163 IWLHAGVIHILANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVSNISVGA 222
Query: 199 SGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISG 256
SGALFGLLGSMLSELITNWTIY NK LTLV+IIAINLAVGILPHVDNFAHIGGFISG
Sbjct: 223 SGALFGLLGSMLSELITNWTIYENKFAALLTLVMIIAINLAVGILPHVDNFAHIGGFISG 282
Query: 257 FLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVML 315
F LGFV LIRPQFG++ Q+ + G S ++ K+ TYQ IL +++L+++I G T+G V+L
Sbjct: 283 FFLGFVLLIRPQFGYINQKNSPLGLSTGPTKCKYKTYQIILLVIALMILISGFTIGFVLL 342
Query: 316 LRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNP 375
++G +A+++CSWCHYLSCVPTS+WSC+ +C ++Q NQLN+TC S GK+ Y+L+NP
Sbjct: 343 MKGFNASENCSWCHYLSCVPTSKWSCKAPSNYCLSSQLENQLNLTCQSTGKTETYVLNNP 402
Query: 376 SSSQ-IQSLCTELCS 389
S+++ I++LC LCS
Sbjct: 403 SNAEAIKNLCLGLCS 417
>gi|224104429|ref|XP_002313433.1| predicted protein [Populus trichocarpa]
gi|222849841|gb|EEE87388.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/292 (73%), Positives = 249/292 (85%), Gaps = 3/292 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVT 114
K WV WL+P FVVAN+A+F+ MYVN+CP NS SCVA LGRFSFQP KENPLLGPSS T
Sbjct: 1 KNWVPWLVPLFVVANVAVFIAVMYVNDCPSNSGSCVAPSLGRFSFQPLKENPLLGPSSST 60
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+KMGALDV++VV KHQ WRLI+C WLH GVFH+LANMLSLL IGIRLEQEFGF+RVGL+
Sbjct: 61 LEKMGALDVNRVVHKHQSWRLISCIWLHAGVFHVLANMLSLLFIGIRLEQEFGFLRVGLV 120
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVII 232
Y+ISGFGGSLLSALFIQ+ ISVGASGALFGLLG MLSELITNWTIY NK LTL+ II
Sbjct: 121 YVISGFGGSLLSALFIQTGISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLLCII 180
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSA-LSRRKFMT 291
A+NLAVG+LPHVDNFAHIGGF+SGF LGFVFLIRPQF W+ Q+ GY A ++ K T
Sbjct: 181 AVNLAVGLLPHVDNFAHIGGFLSGFFLGFVFLIRPQFKWINQKTCPPGYIAPPAQSKHQT 240
Query: 292 YQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
YQ +LW++SL+++I+G TLGLV L RGV+ N++CSWCHYLSCVPTS WSC++
Sbjct: 241 YQYVLWVISLIVLIIGFTLGLVALFRGVNVNNNCSWCHYLSCVPTSLWSCKS 292
>gi|7629998|emb|CAB88340.1| putative protein [Arabidopsis thaliana]
Length = 361
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/340 (65%), Positives = 269/340 (79%), Gaps = 11/340 (3%)
Query: 51 IKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGP 110
+K + W WLIPCFVVAN+A+FVITMYVNNCPK S C A FLGRFSFQ +ENPLLGP
Sbjct: 30 VKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGP 89
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
SS+TLQ MG LDV KVV +GWRL++CNWLHGGV H+L NML+LL IGIR+E +R
Sbjct: 90 SSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRME-----LR 144
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTL 228
+GLLY+ISGFGGS+LSALF++SNISVGASGA+FGLLG MLSE+ NWTIY+NK +TL
Sbjct: 145 IGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTL 204
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
V+I+A+NL +G+LP VDNFAHIGGF +GFLLGFV LIRP +GW+ QR +G A R
Sbjct: 205 VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPGAKPHR- 260
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
F YQ ILW +SL++++ G +GL+ L VD N+HCSWCHYLSCVPTS+WSC EPA C
Sbjct: 261 FKIYQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASC 320
Query: 349 STTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
+TTQ GNQL++TC NGKS YIL+NPS S+I SLC +LC
Sbjct: 321 TTTQLGNQLSMTCLRNGKSASYILANPSDSRINSLCVQLC 360
>gi|326519200|dbj|BAJ96599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/376 (59%), Positives = 275/376 (73%), Gaps = 6/376 (1%)
Query: 18 GGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITM 77
G G+G VE RP P PA + ++W WL+P +A +A+F++TM
Sbjct: 6 AGPDPGTGAVEVRVERPQRPP--VHPNPARLRARPYYRRWTPWLVPAASIACVAVFLVTM 63
Query: 78 YVNNCP-KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLI 136
+VN+CP ++S +C A FLGRF+FQP KENPLLGPSS TL KMGALDVSKVV QGWRLI
Sbjct: 64 FVNDCPNRSSGNCSAGFLGRFAFQPLKENPLLGPSSTTLLKMGALDVSKVVQGRQGWRLI 123
Query: 137 TCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISV 196
TC WLH GV H+L N+L LL IGIRLEQEFGF+R+GL+Y+ISGFGGSL+SALFI+++ISV
Sbjct: 124 TCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRASISV 183
Query: 197 GASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFI 254
GASGALFGL+GSMLSELITNW++Y NK LTLV++I +NLA+GILP VDNFAHIGG I
Sbjct: 184 GASGALFGLIGSMLSELITNWSLYANKVAALLTLVLVIVVNLALGILPRVDNFAHIGGLI 243
Query: 255 SGFLLGFVFLIRPQFGWVEQRYALSG-YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLV 313
SGFLLGFV IRPQF W+ QR G +A + RK TYQ ILWIV+ +L+I+G T+ +V
Sbjct: 244 SGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAERKHKTYQYILWIVAAILLIIGFTVAIV 303
Query: 314 MLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILS 373
ML RG +ANDHCSWCHYLSCVPT +W C + P C+ N LN+TC G YI++
Sbjct: 304 MLFRGYNANDHCSWCHYLSCVPTKKWKCNSSPTTCTAILQANTLNLTCEGKGIHRSYIVA 363
Query: 374 NPSSSQIQSLCTELCS 389
+ +I LC +LCS
Sbjct: 364 EATQDKIDQLCNQLCS 379
>gi|326528413|dbj|BAJ93395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/376 (59%), Positives = 275/376 (73%), Gaps = 6/376 (1%)
Query: 18 GGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITM 77
G G+G VE RP P PA + ++W WL+P +A +A+F++TM
Sbjct: 6 AGPDPGTGAVEVRVERPQRPP--VHPNPARLRARPYYRRWTPWLVPAASIACVAVFLVTM 63
Query: 78 YVNNCP-KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLI 136
+VN+CP ++S +C A FLGRF+FQP KENPLLGPSS TL KMGALDVSKVV QGWRLI
Sbjct: 64 FVNDCPNRSSGNCSAGFLGRFAFQPLKENPLLGPSSTTLLKMGALDVSKVVQGRQGWRLI 123
Query: 137 TCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISV 196
TC WLH GV H+L N+L LL IGIRLEQEFGF+R+GL+Y+ISGFGGSL+SALFI+++ISV
Sbjct: 124 TCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRASISV 183
Query: 197 GASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFI 254
GASGALFGL+GSMLSELITNW++Y NK LTLV++I +NLA+GILP VDNFAHIGG I
Sbjct: 184 GASGALFGLIGSMLSELITNWSLYANKVAALLTLVLVIVVNLALGILPRVDNFAHIGGLI 243
Query: 255 SGFLLGFVFLIRPQFGWVEQRYALSG-YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLV 313
SGFLLGFV IRPQF W+ QR G +A + RK TYQ ILWIV+ +L+I+G T+ +V
Sbjct: 244 SGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAERKHKTYQYILWIVAAILLIIGFTVAIV 303
Query: 314 MLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILS 373
ML RG +ANDHCSWCHYLSCVPT +W C + P C+ N LN+TC G YI++
Sbjct: 304 MLFRGYNANDHCSWCHYLSCVPTEKWKCNSSPTTCTAILQANTLNLTCEGKGIHRSYIVA 363
Query: 374 NPSSSQIQSLCTELCS 389
+ +I LC +LCS
Sbjct: 364 EATQDKIDQLCNQLCS 379
>gi|148906261|gb|ABR16286.1| unknown [Picea sitchensis]
Length = 383
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/384 (57%), Positives = 277/384 (72%), Gaps = 12/384 (3%)
Query: 12 IKVNSKGGGGSGSGNTV-HPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANI 70
+ + KG G GN V HP+++ RP V Y E + +++ + +I FVV NI
Sbjct: 6 MDIERKGSMDWGRGNKVIHPMQDSPRPAAVP------YFEARPNRRRSSCIISLFVVLNI 59
Query: 71 AMFVITMYVNNCPKN-SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDK 129
+F++ M++N+CPK+ SC +FLGRFSFQP KENPL GPSS TL+KMGAL+ KVV +
Sbjct: 60 VIFLVAMFINDCPKDLGDSCTLKFLGRFSFQPLKENPLFGPSSSTLEKMGALEWQKVVKE 119
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
HQGWRLITC WLH GV H+LANMLSL+ IGIRLEQEFGF R+G +Y++S FGGS+LSALF
Sbjct: 120 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQEFGFARIGTVYLVSAFGGSVLSALF 179
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNF 247
Q+ +SVGASGALFGLLG+MLSELITNWTIY +K +TLV II +NLA G+LPHVDNF
Sbjct: 180 NQNGVSVGASGALFGLLGAMLSELITNWTIYASKFAALVTLVFIIVVNLAFGLLPHVDNF 239
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS--RRKFMTYQCILWIVSLVLVI 305
AHIGGFISGFLLGFVFL+RPQFGWV ++ GY S + K YQ IL ++SL+L+I
Sbjct: 240 AHIGGFISGFLLGFVFLMRPQFGWVNRKIIPPGYDVNSVVKSKHNAYQYILGLLSLILLI 299
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNG 365
VG T+GLV+L GV+AN HCSWCHYL CVPTSRWSC C TQ + + C + G
Sbjct: 300 VGFTVGLVLLFHGVNANKHCSWCHYLDCVPTSRWSCNDGVIACQETQSDTEFTLICQNGG 359
Query: 366 KSNLYILSNPSSSQIQSLCTELCS 389
KS +Y N S ++ + LC + CS
Sbjct: 360 KSKIYPFQNISEAKKRQLCLQQCS 383
>gi|326504866|dbj|BAK06724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/375 (56%), Positives = 275/375 (73%), Gaps = 29/375 (7%)
Query: 44 PPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPK----------NSVSCVARF 93
PP E + ++W +L+P F+ ANIA+FV TMYVN+CP +SV A
Sbjct: 44 PPPPSQEFRPFRRWFPFLVPLFIAANIALFVRTMYVNDCPAHAAAAAAAIGDSVGGAAGG 103
Query: 94 ---------------LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITC 138
LGR++FQP+KENPL+GP+S TL +MGAL+ KV H+ WRLITC
Sbjct: 104 SAGAAASRGCMLEPDLGRYAFQPYKENPLVGPTSATLLQMGALETGKVAKDHEWWRLITC 163
Query: 139 NWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGA 198
WLH GV HILANMLSLL+IGIRLE+EFGF+R+G LY+ISG GGSLLSALF+ SNISVGA
Sbjct: 164 IWLHAGVIHILANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVSNISVGA 223
Query: 199 SGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISG 256
SGALFGLLGSMLSELITNWTIY NK LTLV+II INLAVGILPHVDNFAHIGGF+SG
Sbjct: 224 SGALFGLLGSMLSELITNWTIYENKCAALLTLVMIIVINLAVGILPHVDNFAHIGGFVSG 283
Query: 257 FLLGFVFLIRPQFGWVEQRYALSG-YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVML 315
F LGFV L+RPQFG++ Q+ + G +S ++ K+ YQ +L +++LV++I G G V+L
Sbjct: 284 FFLGFVLLMRPQFGYINQKNSRLGVHSGTTKCKYKPYQIVLLVIALVILICGFITGFVLL 343
Query: 316 LRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNP 375
++G DA+ CSWCHYLSCVPTS+W C+ +C ++Q G+QLN+TC S GK+ Y++++P
Sbjct: 344 MQGFDASQQCSWCHYLSCVPTSKWDCKAPNNYCVSSQLGDQLNLTCQSTGKTETYVINSP 403
Query: 376 SSSQ-IQSLCTELCS 389
++ + +++LC LCS
Sbjct: 404 TNPEAVKNLCLGLCS 418
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 239/299 (79%), Gaps = 4/299 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPK-NSVSCVARFLGRFSFQPFKENPLLGPSSV 113
++W W++ ++ + +F+++MYVN+CP+ NS C A FLGRF+FQP KENPLLGPSS
Sbjct: 36 RRWTPWIVAAIALSCVVVFLVSMYVNDCPRRNSGDCAAGFLGRFAFQPLKENPLLGPSSA 95
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL KMGALDV+KVV HQGWRLITC WLH GV H+L NML LL IGIRLEQEFGF+R+GL
Sbjct: 96 TLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRIGL 155
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+Y+ISG GGSL+SALFI+S+ISVGASGALFGL+GSMLSELITNW++Y NK LTLV +
Sbjct: 156 VYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFV 215
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFM 290
I +NLA+GILP VDNFAHIGG ISGFLLGFV IRPQF W+ QR G A +RK
Sbjct: 216 IVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRKHK 275
Query: 291 TYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS 349
TYQ ILW+ + +++IVG T+ +V+LLRG +ANDHCSWCHYLSCVPT RW C + P +C+
Sbjct: 276 TYQYILWLAAAIMLIVGFTVAIVLLLRGYNANDHCSWCHYLSCVPTKRWKCNSSPTYCT 334
>gi|356575933|ref|XP_003556090.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/336 (62%), Positives = 254/336 (75%), Gaps = 20/336 (5%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPA-VYGEIKHSKKWVTWLIPCFVVANIAMFV 74
GGGG+ + T + SAP + VY H W +WL+P FVVANIA+FV
Sbjct: 6 ESGGGGTKNNRTAE--------ENYSAPESSHVYDSETH---WTSWLVPMFVVANIAVFV 54
Query: 75 ITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKH 130
ITMY+NNCP+N++ CVARFLGRFSFQP +ENPLLGPSS TL KMGAL VV++H
Sbjct: 55 ITMYINNCPRNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRH 114
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
QGWRL TC WLH GV H+LANMLSL+ IGIRLEQ+FGFI++G++Y++SGFGGS+LS+LFI
Sbjct: 115 QGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFI 174
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFA 248
+ +ISVGASGALFGLLG+MLSELITNWTIY+NK +TL+VII INL +GILPHVDNFA
Sbjct: 175 RDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFA 234
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HIGGF+ GFLLGF+ L RPQF W+EQR +G + K+ YQ +LWIVSL+L+I GL
Sbjct: 235 HIGGFLVGFLLGFILLPRPQFSWLEQRRLPAGVGM--KSKYKAYQYVLWIVSLILLIAGL 292
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ LVML RG DHC WC YL+CVPTS+W C +
Sbjct: 293 STALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSND 328
>gi|449452364|ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449495860|ref|XP_004159966.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 327
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/296 (66%), Positives = 244/296 (82%), Gaps = 12/296 (4%)
Query: 54 SKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLG 109
K+W WL+P FVVANIAMF++ MYVNNCP +++ CVA FLGRFSFQP +ENPLLG
Sbjct: 34 EKQWTPWLVPMFVVANIAMFIVVMYVNNCPDSNLGFGDKCVASFLGRFSFQPIRENPLLG 93
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PSS TL K+GAL +KVV +HQGWRL++C WLH G+ H+LANMLSL++IGIRLEQ+FGF+
Sbjct: 94 PSSNTLVKLGALKWNKVVHEHQGWRLLSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFV 153
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLT 227
R+G++Y+++G GGS++S+LFIQ+NISVGASGALFGLLG+MLSEL+TNWTIYTNK T
Sbjct: 154 RIGMIYLVAGVGGSVMSSLFIQNNISVGASGALFGLLGAMLSELLTNWTIYTNKVAALFT 213
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR 287
L+VI+ INLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQF W E+ + G +RR
Sbjct: 214 LIVIVVINLAVGILPHVDNFAHIGGFLTGFLLGFVLLVRPQFKWTERHHLPPG----ARR 269
Query: 288 --KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
K+ TYQ ILW+ + +L++ G TLGLVML RG + N HCSWCHYLSCVPTSRW C
Sbjct: 270 VPKYKTYQYILWLAAAILLVAGFTLGLVMLFRGENGNKHCSWCHYLSCVPTSRWDC 325
>gi|224134785|ref|XP_002321905.1| predicted protein [Populus trichocarpa]
gi|222868901|gb|EEF06032.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 261/348 (75%), Gaps = 27/348 (7%)
Query: 1 MAARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTW 60
M+ ++ G +K S + +P+E+ + H + +W
Sbjct: 1 MSREDTERGGGVKSRGNNSNSYLSSTSTYPIEDTE----------------AHYR--TSW 42
Query: 61 LIPCFVVANIAMFVITMYVNNCPKN-----SVSCVARFLGRFSFQPFKENPLLGPSSVTL 115
L+P FVVAN+A+F++ M +NNCPK+ CVARFLGRFSF+P K+NPL GPSS TL
Sbjct: 43 LVPMFVVANVAVFIVVMCINNCPKHLHTRLEGKCVARFLGRFSFEPLKDNPLFGPSSATL 102
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
+++GAL+ +KVVDKHQGWRLITC WLH G+ H+LANMLSL+ IGIRLEQ+FGF+R+G++Y
Sbjct: 103 ERLGALEWTKVVDKHQGWRLITCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVVY 162
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIA 233
++SGFGGS+LS+LFI++NISVGASGALFGLLG+MLSELITNW+IYTNK LTL+VII
Sbjct: 163 LLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWSIYTNKAAALLTLLVIIV 222
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
INLA+GILPHVDNFAHIGGF+SGFLLGFV L RPQ+GW+E+R SG + K+ +Q
Sbjct: 223 INLAIGILPHVDNFAHIGGFLSGFLLGFVLLPRPQYGWLERRNVPSGVGV--KSKYRAHQ 280
Query: 294 CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
LW++S++L+IVG T+ LVML +G + NDHC WCHYLSCVPTSRW C
Sbjct: 281 YALWLISVILLIVGFTVALVMLFKGENGNDHCHWCHYLSCVPTSRWKC 328
>gi|218187509|gb|EEC69936.1| hypothetical protein OsI_00380 [Oryza sativa Indica Group]
Length = 428
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/362 (60%), Positives = 279/362 (77%), Gaps = 22/362 (6%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-----------------SVSC-VA 91
E + ++W +L+P FVV N+A+FV+TMY+N+CP + S C +
Sbjct: 67 EFRPFRRWFPFLVPLFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCWLE 126
Query: 92 RFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILAN 151
LGRF+FQ +KENPL+GPSS TL KMGAL+ SKV + H+GWRLITC WLH GV HILAN
Sbjct: 127 PELGRFAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHILAN 186
Query: 152 MLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS 211
MLSLL+IGIRLE+EFGF+R+G LY+ISG GGSLLSALF+ SNISVGASGALFGLLGSMLS
Sbjct: 187 MLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSMLS 246
Query: 212 ELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
ELITNWTIY NK LTLV+II INLAVGILPHVDNFAH+GGF SGF LGFV L+RPQF
Sbjct: 247 ELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQF 306
Query: 270 GWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWC 328
G++ Q+ + G ++ K+ TYQ ILW+++ +++I G T+G +++L+G +A++HCSWC
Sbjct: 307 GYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISGFTIGFILVLKGFNASEHCSWC 366
Query: 329 HYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQ-IQSLCTEL 387
HYLSCVPTS+WSC T +C ++Q GNQLN+TC SNGK+ Y L+NP+S++ I+ LC L
Sbjct: 367 HYLSCVPTSKWSCNTPSNYCMSSQLGNQLNLTCESNGKTEAYTLNNPNSTEAIKHLCVHL 426
Query: 388 CS 389
CS
Sbjct: 427 CS 428
>gi|449446051|ref|XP_004140785.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449485528|ref|XP_004157199.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 323
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/294 (65%), Positives = 239/294 (81%), Gaps = 7/294 (2%)
Query: 54 SKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLG 109
+W +WL+P FVVANIA+F++ MY+NNCPK++ CVARFL RFSFQP +ENPL G
Sbjct: 30 ETQWTSWLVPMFVVANIAVFIVVMYINNCPKHNDEFEGKCVARFLERFSFQPLRENPLFG 89
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PS+ TL+KMGAL+ +KVV+KHQ WRLITC WLH GVFH+LANML L+ IG RLEQ+FGF+
Sbjct: 90 PSATTLEKMGALESTKVVNKHQAWRLITCIWLHAGVFHLLANMLCLVFIGTRLEQQFGFV 149
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLT 227
R+G++Y++SGFGGS+LS+L IQ+NISVGASG+LFGLLG+MLSEL TNWTIYTNK T
Sbjct: 150 RIGVIYLVSGFGGSVLSSLLIQNNISVGASGSLFGLLGAMLSELFTNWTIYTNKAAALAT 209
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR 287
L+VII IN +G+LPHV+NFAHIGGF++GFLLGF L RP++GW+EQR L G A
Sbjct: 210 LLVIIFINFGIGLLPHVNNFAHIGGFLTGFLLGFALLPRPKYGWLEQR-NLPGVGAGLSS 268
Query: 288 KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
K+ TYQ +LWIVS+VL+I G T+ LVML R +AND C WCHYL+CVPTSRW C
Sbjct: 269 KYKTYQYVLWIVSVVLLIAGFTIALVMLFREENANDRCHWCHYLNCVPTSRWQC 322
>gi|115450317|ref|NP_001048759.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|108705857|gb|ABF93652.1| membrane protein, putative, expressed [Oryza sativa Japonica Group]
gi|113547230|dbj|BAF10673.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|125542142|gb|EAY88281.1| hypothetical protein OsI_09736 [Oryza sativa Indica Group]
gi|125584694|gb|EAZ25358.1| hypothetical protein OsJ_09173 [Oryza sativa Japonica Group]
gi|215692511|dbj|BAG87931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 251/317 (79%), Gaps = 7/317 (2%)
Query: 31 VEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCP----KNS 86
VE+ R + V P +Y + + ++WV W++P F+VANI +FV+TMY NNCP S
Sbjct: 8 VEKGARRKEVGKVPSPLYPQHEGEREWVPWIVPSFLVANIVVFVLTMYANNCPLHTPPRS 67
Query: 87 VSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVF 146
C+ARFLGRFSFQP ENPLLGPSS TLQKMGAL KVV +HQG+RLIT WLH GV
Sbjct: 68 GKCIARFLGRFSFQPLHENPLLGPSSATLQKMGALVWDKVVHEHQGYRLITSIWLHAGVL 127
Query: 147 HILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLL 206
H++ANMLSL+ IG+RLEQ+FG++R+G +Y++SG GGS+LS+LFI+++ISVGASGALFGLL
Sbjct: 128 HLVANMLSLIFIGLRLEQQFGYVRIGAIYLLSGLGGSVLSSLFIRNHISVGASGALFGLL 187
Query: 207 GSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
G+MLSEL+TNWTIYTNK +TL+ +IA+NLA+GILPHV+NFAHIGGF++GFLLGFV L
Sbjct: 188 GAMLSELLTNWTIYTNKVAAVITLLFVIAVNLALGILPHVNNFAHIGGFLTGFLLGFVLL 247
Query: 265 IRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDH 324
+RP FGW+E RY+L S S +K++ YQ IL ++ LVIVG +G+ ML RG +AND
Sbjct: 248 MRPHFGWME-RYSLPSGSPCSSKKYLVYQWILLAIATALVIVGFAVGMTMLFRGENANDS 306
Query: 325 CSWCHYLSCVPTSRWSC 341
C WCHYLSCVPTSRW+C
Sbjct: 307 CHWCHYLSCVPTSRWTC 323
>gi|414867422|tpg|DAA45979.1| TPA: membrane protein [Zea mays]
Length = 334
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/337 (60%), Positives = 251/337 (74%), Gaps = 24/337 (7%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVI 75
KGG +G G P PP +Y + ++WV WL+P V NI +F +
Sbjct: 9 EKGGRNNGDGKPSPP------------PPGHLYPQRDGEREWVPWLVPLVVAVNIVLFAV 56
Query: 76 TMYVNNCPKNSVS--------CVAR-FLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKV 126
MYVNNCP ++ S CVAR FL RFSFQP ENPLLGPSS TLQK+GAL KV
Sbjct: 57 AMYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKV 116
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V +HQGWRL+TC WLH GV H+LANM+SL++IG+RLEQ+FG++RVG++Y++SG GGS+LS
Sbjct: 117 VREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLS 176
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
+LFI++NISVGASGALFGLLG+MLSEL TNWTIY NK +TL+V+IAINLA+GILPHV
Sbjct: 177 SLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGILPHV 236
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
DNFAHIGGF++GFLLGFV L+RP +GW+ QRYAL + +K++ YQ L V+ VL
Sbjct: 237 DNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRYALPSDVKYTTKKYLAYQWALLAVASVLA 295
Query: 305 IVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++G +GL ML RGV+ANDHC WCHYLSCVPTSRWSC
Sbjct: 296 VIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSC 332
>gi|224053955|ref|XP_002298056.1| predicted protein [Populus trichocarpa]
gi|222845314|gb|EEE82861.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 254/324 (78%), Gaps = 9/324 (2%)
Query: 27 TVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNS 86
T +E + +G S+ P+ Y E K+W +WLIP FVVANI +F++ MYVN+CPK +
Sbjct: 2 TSGDLERGTKNRGNSSNFPSYYVETA-EKQWTSWLIPMFVVANIVVFIVVMYVNDCPKKN 60
Query: 87 V----SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLH 142
+ SCVA+FLGRFSFQP KENPL GPSS TL+KMGAL+ +K+V QGWRLITC WLH
Sbjct: 61 LGSERSCVAKFLGRFSFQPLKENPLFGPSSATLEKMGALEWNKIVRGDQGWRLITCMWLH 120
Query: 143 GGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGAL 202
GV H+LANMLSL+ IGIRLEQ+FGF+RVGL+Y++SGFGGS+ S+LFIQ NISVGASGAL
Sbjct: 121 AGVIHVLANMLSLVFIGIRLEQQFGFVRVGLIYLVSGFGGSIFSSLFIQRNISVGASGAL 180
Query: 203 FGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLG 260
FGLLG+MLSEL+TNWTIY+NK LTL+VIIAINLAVGILPHVDNFAHIGGF +GFLLG
Sbjct: 181 FGLLGAMLSELLTNWTIYSNKIAALLTLMVIIAINLAVGILPHVDNFAHIGGFFTGFLLG 240
Query: 261 FVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVD 320
FV L+RPQFGWVE ++ + S+ K YQ + + + VL+IVG T GLVML +G +
Sbjct: 241 FVLLLRPQFGWVESQHFRADAHVKSKHK--AYQYMFLLAAAVLLIVGFTFGLVMLFKGEN 298
Query: 321 ANDHCSWCHYLSCVPTSRWSCRTE 344
NDHCSWCHYLSCVPTS+W C
Sbjct: 299 GNDHCSWCHYLSCVPTSKWKCENR 322
>gi|195652545|gb|ACG45740.1| membrane protein [Zea mays]
Length = 334
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/337 (59%), Positives = 251/337 (74%), Gaps = 24/337 (7%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVI 75
KGG +G G P PP +Y + ++W+ WL+P V NI +F +
Sbjct: 9 EKGGRNNGDGKPSPP------------PPGHLYPQRDGEREWLPWLVPLVVAVNIVLFAV 56
Query: 76 TMYVNNCPKNSVS--------CVAR-FLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKV 126
MYVNNCP ++ S CVAR FL RFSFQP ENPLLGPSS TLQK+GAL KV
Sbjct: 57 AMYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKV 116
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V +HQGWRL+TC WLH GV H+LANM+SL++IG+RLEQ+FG++RVG++Y++SG GGS+LS
Sbjct: 117 VREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLS 176
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
+LFI++NISVGASGALFGLLG+MLSEL TNWTIY NK +TL+V+IAINLA+GILPHV
Sbjct: 177 SLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGILPHV 236
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
DNFAHIGGF++GFLLGFV L+RP +GW+ QRYAL + +K++ YQ L V+ VL
Sbjct: 237 DNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRYALPSDVKYTTKKYLAYQWALLAVASVLA 295
Query: 305 IVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++G +GL ML RGV+ANDHC WCHYLSCVPTSRWSC
Sbjct: 296 VIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSC 332
>gi|414876345|tpg|DAA53476.1| TPA: hypothetical protein ZEAMMB73_598699 [Zea mays]
Length = 663
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/381 (55%), Positives = 262/381 (68%), Gaps = 42/381 (11%)
Query: 1 MAARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKK---- 56
M R + I V S GGG P E R G P +G +
Sbjct: 1 MPRRGETAVVPIDVASAGGGRGDE----RPKRERHRSHG-----PGRHGPHRSRPPPPPP 51
Query: 57 --------WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSC------------------V 90
W +L+P F+VANI +FV+TMYVN+CP ++ + +
Sbjct: 52 PAFRPFRRWFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWL 111
Query: 91 ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
A LGRF+FQ FKENPL+GPSS TL +MGAL+ SKV H+GWRLITC WLH GV HILA
Sbjct: 112 APELGRFAFQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILA 171
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML 210
NMLSLL+IGIRLE+EFGFIR+G LY+ISG GGSLLS+LF+ SNISVGASGALFGLLGSML
Sbjct: 172 NMLSLLMIGIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSML 231
Query: 211 SELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
SELITNWTIY NK LTLV+II INLAVGILPHVDNFAH+GGF+SGF LGFV L+RPQ
Sbjct: 232 SELITNWTIYENKFAALLTLVMIILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQ 291
Query: 269 FGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSW 327
FG++ Q+ + G+ +++RKF TYQ IL ++S ++++ G T+GLV+L +G +A++HCSW
Sbjct: 292 FGYINQKNSPLGFPMGVTKRKFKTYQVILLVISTMILVSGFTIGLVLLFQGFNASEHCSW 351
Query: 328 CHYLSCVPTSRWSCRTEPAFC 348
CHY+SCVPTS+WSC +C
Sbjct: 352 CHYMSCVPTSKWSCNAPNNYC 372
>gi|194688302|gb|ACF78235.1| unknown [Zea mays]
Length = 336
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/306 (64%), Positives = 243/306 (79%), Gaps = 12/306 (3%)
Query: 47 VYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS--------CVAR-FLGRF 97
+Y + ++WV WL+P V NI +F + MYVNNCP ++ S CVAR FL RF
Sbjct: 30 LYPQRDGEREWVPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRHGGAGSCVARGFLHRF 89
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
SFQP ENPLLGPSS TLQK+GAL KVV +HQGWRL+TC WLH GV H+LANM+SL++
Sbjct: 90 SFQPLSENPLLGPSSATLQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVL 149
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
IG+RLEQ+FG++RVG++Y++SG GGS+LS+LFI++NISVGASGALFGLLG+MLSEL TNW
Sbjct: 150 IGLRLEQQFGYVRVGIIYLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNW 209
Query: 218 TIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
TIY NK +TL+V+IAINLA+GILPHVDNFAHIGGF++GFLLGFVFL+RP +GW+ QR
Sbjct: 210 TIYANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVFLMRPHYGWM-QR 268
Query: 276 YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
YAL + +K++ YQ L V+ VL ++G +GL ML RGV+ANDHC WCHYLSCVP
Sbjct: 269 YALPSDVKYTTKKYLVYQWALLAVASVLAVIGFAIGLGMLFRGVNANDHCGWCHYLSCVP 328
Query: 336 TSRWSC 341
TSRWSC
Sbjct: 329 TSRWSC 334
>gi|222617736|gb|EEE53868.1| hypothetical protein OsJ_00361 [Oryza sativa Japonica Group]
Length = 335
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/335 (62%), Positives = 259/335 (77%), Gaps = 22/335 (6%)
Query: 77 MYVNNCPKN-----------------SVSC-VARFLGRFSFQPFKENPLLGPSSVTLQKM 118
MY+N+CP + S C + LGRF+FQ +KENPL+GPSS TL KM
Sbjct: 1 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 60
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GAL+ SKV + H+GWRLITC WLH GV HILANMLSLL+IGIRLE+EFGF+R+G LY+IS
Sbjct: 61 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 120
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINL 236
G GGSLLSALF+ SNISVGASGALFGLLGSMLSELITNWTIY NK LTLV+II INL
Sbjct: 121 GVGGSLLSALFMVSNISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINL 180
Query: 237 AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCI 295
AVGILPHVDNFAH+GGF SGF LGFV L+RPQFG++ Q+ + G ++ K+ TYQ I
Sbjct: 181 AVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQII 240
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGN 355
LW+++ +++I G T+G +++L+G +A++HCSWCHYLSCVPTS+WSC T +C ++Q GN
Sbjct: 241 LWVIATLILISGFTIGFILVLKGFNASEHCSWCHYLSCVPTSKWSCNTPNNYCMSSQLGN 300
Query: 356 QLNVTCSSNGKSNLYILSNPSSSQ-IQSLCTELCS 389
QLN+TC SNGK+ Y L+NP+S++ I+ LC LCS
Sbjct: 301 QLNLTCESNGKTEAYTLNNPNSTEAIKHLCVHLCS 335
>gi|242040475|ref|XP_002467632.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
gi|241921486|gb|EER94630.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
Length = 335
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/340 (57%), Positives = 248/340 (72%), Gaps = 22/340 (6%)
Query: 13 KVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAM 72
+ + + GG +G G ++ PQ PP GE ++WV W +P NI +
Sbjct: 5 RYDVEKGGRNGEG------KQRYSPQAEHLYPPQRDGE----REWVPWFVPLVAAVNIVL 54
Query: 73 FVITMYVNNCPKNS---------VSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDV 123
F + MYVNNCP ++ FL RFSFQP ENPLLGPSS TLQK+GAL
Sbjct: 55 FAVAMYVNNCPAHASRRGGGGAGACVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVW 114
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
KVV +HQGWRL+TC WLH GV H+LANM+SL++IG+RLEQ+FG++R+G++Y++SG GGS
Sbjct: 115 DKVVQEHQGWRLVTCIWLHAGVAHLLANMVSLVLIGLRLEQQFGYVRIGIIYLVSGVGGS 174
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGIL 241
+LS+LF+++ ISVGASGALFGLLG+MLSEL TNWTIY+NK +TL+++IAINLA+GIL
Sbjct: 175 VLSSLFVRNTISVGASGALFGLLGAMLSELFTNWTIYSNKAAALVTLLIVIAINLAIGIL 234
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSL 301
PHVDNFAHIGGF++GFLLGFVFL+RP +GW+ QRY L + +K++ YQ L V+
Sbjct: 235 PHVDNFAHIGGFLTGFLLGFVFLMRPHYGWM-QRYVLPSDVKYTSKKYLAYQWALLAVAS 293
Query: 302 VLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
VL +VG +GL ML RGV+ANDHC WCHYLSCVPTSRWSC
Sbjct: 294 VLAVVGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSC 333
>gi|357114368|ref|XP_003558972.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 331
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 243/323 (75%), Gaps = 15/323 (4%)
Query: 33 EMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCP--------- 83
E QG P +Y + + ++W WL+P +VANI +F ITMY NNCP
Sbjct: 8 EKGGKQGGKVVPAPLYPQHEGEREWTPWLVPSILVANIVVFAITMYYNNCPAHNANTGTR 67
Query: 84 ---KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNW 140
K CVA FLGRFSFQP ++NPLLGPSS TL+KMGAL KVV HQGWRL++C W
Sbjct: 68 GGSKQQQQCVAGFLGRFSFQPLRQNPLLGPSSATLEKMGALVWDKVVHSHQGWRLLSCMW 127
Query: 141 LHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASG 200
LH G+ H+LANMLSLL IG+RLEQ+FG++R+G +Y++SG GGS+LS+LFI+++ISVGASG
Sbjct: 128 LHAGILHLLANMLSLLFIGLRLEQQFGYVRIGAIYLLSGIGGSVLSSLFIRTSISVGASG 187
Query: 201 ALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
ALFGLLG+MLSEL+TNWTIYTNK +TL+ +I +NL +GILPHV+NFAHIGGF++GFL
Sbjct: 188 ALFGLLGAMLSELLTNWTIYTNKVAAVMTLLFVITVNLVLGILPHVNNFAHIGGFLAGFL 247
Query: 259 LGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRG 318
LGFV L+RP +GW+E RY+L + + RK++ YQ +L V+L+L ++G GL M+ RG
Sbjct: 248 LGFVVLMRPHYGWME-RYSLPAGTPCTSRKYLLYQWVLMAVALLLGVIGFAAGLAMVFRG 306
Query: 319 VDANDHCSWCHYLSCVPTSRWSC 341
V+AN C WCHYLSCVPT+RW+C
Sbjct: 307 VNANSSCHWCHYLSCVPTARWTC 329
>gi|115480259|ref|NP_001063723.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|52076044|dbj|BAD46497.1| putative membrane protein [Oryza sativa Japonica Group]
gi|52077312|dbj|BAD46353.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113631956|dbj|BAF25637.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|125564435|gb|EAZ09815.1| hypothetical protein OsI_32104 [Oryza sativa Indica Group]
gi|125606379|gb|EAZ45415.1| hypothetical protein OsJ_30065 [Oryza sativa Japonica Group]
gi|215700990|dbj|BAG92414.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765558|dbj|BAG87255.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/298 (64%), Positives = 239/298 (80%), Gaps = 9/298 (3%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS---CVARFLGRFSFQPFKENPLL 108
+ +KW WL+P +VA IA+F++ MYVNNCPK+ + CVA FL RFSFQP +ENPLL
Sbjct: 29 RDDRKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALGGCVAGFLRRFSFQPLRENPLL 88
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPSS TLQKMGALD +KVV +HQGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF
Sbjct: 89 GPSSATLQKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 148
Query: 169 IRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
+R+G +Y++SGFGGS+LSALF+++N ISVGASGALFGLLGSMLSELI NWTIY+NK
Sbjct: 149 VRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAAAI 208
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+TL+ IIAINLA+GILPH DNFAHIGGF++GFLLGFV L RPQFGW+E R+ L +
Sbjct: 209 ITLLFIIAINLAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWME-RHELPQTN--Q 265
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ +LW+V+ VL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 266 PPKYKAYQYVLWVVAFVLLLVGFVVSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 323
>gi|356534153|ref|XP_003535622.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 369
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/345 (60%), Positives = 258/345 (74%), Gaps = 19/345 (5%)
Query: 13 KVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPA-VYGEIKHSKKWVTWLIPCFVVANIA 71
+ + + GGG N + SAP + VY H W +WL+P FVVANIA
Sbjct: 3 RRDLESGGGVTKNNR-------SAEENYSAPESSHVYDSETH---WTSWLVPMFVVANIA 52
Query: 72 MFVITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVV 127
+FVITMY+NNCP+N++ CVARFLGRFSFQP +ENPLLGPSS TL KMGAL VV
Sbjct: 53 VFVITMYINNCPRNNIRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVV 112
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
++HQGWRL+TC WLH GV H+LANMLSL+ IGIRLEQ+FGFI++G++Y++SGFGGS+LS+
Sbjct: 113 NRHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSS 172
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVD 245
LFI+ +ISVGASGALFGLLG+MLSELITNWTIY+NK +TL+VII INL +GILPHVD
Sbjct: 173 LFIRDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVD 232
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
NFAHIGGF+ G LLGF+ L RPQFGW+EQR +G + K+ T+Q +L +VSL+L+I
Sbjct: 233 NFAHIGGFLVGLLLGFILLPRPQFGWLEQRRLPAGVQM--KSKYKTHQYVLGVVSLILLI 290
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCST 350
GL+ LVML RG DHC WC YL+CVPTS+W C + A C +
Sbjct: 291 AGLSTALVMLFRGEKGYDHCHWCRYLTCVPTSKWDCGGDAAACES 335
>gi|125532680|gb|EAY79245.1| hypothetical protein OsI_34361 [Oryza sativa Indica Group]
Length = 332
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/315 (60%), Positives = 249/315 (79%), Gaps = 6/315 (1%)
Query: 32 EEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV---S 88
E + + S A Y + + ++WV WL+P +VAN+ +F + MYVNNCP ++ +
Sbjct: 17 REGEEERCGSPAAVAQYPQREGEREWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGA 76
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
CVA FL RFSFQP ENPLLGPSS TLQKMGAL KVV +HQGWRL+TC WLH GV H+
Sbjct: 77 CVAGFLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHL 136
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS 208
LANMLSL++IG+RLEQ+FG++R+G++Y++SG GGS+LS+LFI+++ISVGASGALFGLLG+
Sbjct: 137 LANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGA 196
Query: 209 MLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
MLSEL TNWTIYTNK +TL+++IAINLA+GILPHVDNFAHIGGF++GFLLGF+FL+R
Sbjct: 197 MLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMR 256
Query: 267 PQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCS 326
P +GW+ QRY L + +K++ YQ IL V+ VL ++G +GL ML RGV+AN+ C
Sbjct: 257 PHYGWM-QRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCH 315
Query: 327 WCHYLSCVPTSRWSC 341
WCHYLSC+PTSRW+C
Sbjct: 316 WCHYLSCIPTSRWTC 330
>gi|110430670|gb|ABG73460.1| membrane protein [Oryza brachyantha]
Length = 326
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/300 (64%), Positives = 240/300 (80%), Gaps = 9/300 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS---CVARFLGRFSFQPFKENP 106
E + +KW WL+P +VA IA+F++ MYVNNCPK+ + CVA FL RFSFQP +ENP
Sbjct: 30 EGRDERKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALGGCVAGFLRRFSFQPLRENP 89
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
LLGPSS TLQKMGALD +KVV +HQGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+F
Sbjct: 90 LLGPSSPTLQKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQF 149
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK-- 223
GF+R+G +Y++SGFGGS+LSALF+++N ISVGASGALFGLLGSMLSELI NWTIY+NK
Sbjct: 150 GFVRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAA 209
Query: 224 HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSA 283
+TL+ IIAINLA+GILPH DNFAHIGGF++GFLLGFV L RPQFGW+E R+ L +
Sbjct: 210 AIITLLFIIAINLAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWME-RHELPQTN- 267
Query: 284 LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ +LW+V+ VL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 268 -QPPKYKAYQYVLWVVAFVLLLVGFVVSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCDT 326
>gi|255539517|ref|XP_002510823.1| KOM, putative [Ricinus communis]
gi|223549938|gb|EEF51425.1| KOM, putative [Ricinus communis]
Length = 325
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/318 (61%), Positives = 247/318 (77%), Gaps = 10/318 (3%)
Query: 31 VEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN----- 85
+E D +G + E K ++ W +WL+P FVVAN+++F+I MY+NNCP +
Sbjct: 6 IERGDGVKGYQTSSSSYLIEYKETQ-WTSWLVPMFVVANVSVFIIVMYMNNCPDHFHPRF 64
Query: 86 SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGV 145
CVARFLGRFSF+P ++NPL GPSS TL KMGAL KVV HQGWRL+TC WLH G+
Sbjct: 65 EGKCVARFLGRFSFEPLRDNPLFGPSSATLTKMGALQWEKVVHGHQGWRLVTCIWLHAGI 124
Query: 146 FHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGL 205
H+LANML L+ IG+RLEQ+FGF+R+G++Y++SGF GS+LS+LFI+++ISVGASGALFGL
Sbjct: 125 IHLLANMLCLVFIGVRLEQQFGFVRIGIIYLVSGFAGSVLSSLFIRNSISVGASGALFGL 184
Query: 206 LGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVF 263
LG+MLSELITNWT+YTNK LTL+VIIAINLA+GILPHVDNFAHIGGF+SGFLLGF+
Sbjct: 185 LGAMLSELITNWTLYTNKAAALLTLLVIIAINLAIGILPHVDNFAHIGGFLSGFLLGFIL 244
Query: 264 LIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND 323
L RPQFGW+E + + S + K+ YQ +LW+V+L L+IVGL + LVML RG + ND
Sbjct: 245 LARPQFGWLESQNVPA--SVGVKSKYKGYQYVLWLVALALLIVGLVVALVMLFRGENGND 302
Query: 324 HCSWCHYLSCVPTSRWSC 341
C WCHYLSCVPTSRW C
Sbjct: 303 RCHWCHYLSCVPTSRWKC 320
>gi|449460471|ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/319 (64%), Positives = 254/319 (79%), Gaps = 11/319 (3%)
Query: 32 EEMDRPQGVSAPPPAVYGEIKH----SKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV 87
+++R + PP Y + K+W +WL+P FVVAN+AMF++ MYVNNCPK+S+
Sbjct: 4 RDLERGGAKTNKPPGNYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSL 63
Query: 88 ---SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGG 144
CVARFLGRFSF+P + NPL GPSS TLQK+GAL+ K+V HQ WRLIT WLH G
Sbjct: 64 GSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAG 123
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFG 204
V H+LANMLSL+ IGIRLEQ+FGFIRVG+LY++SG GGS+LS+LFIQ+NISVGASGALFG
Sbjct: 124 VIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGALFG 183
Query: 205 LLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
LLG+MLSEL+TNWTIYT+K +TL+VII INLAVGILPHVDNFAHIGGF++GFLLGF+
Sbjct: 184 LLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFI 243
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
L+RPQFGW+E+R+ + A+ + K YQ IL V+L L+IVG T+GLVML RG + N
Sbjct: 244 LLLRPQFGWIERRHLPANSRAVPKHKL--YQYILCFVALALLIVGFTIGLVMLFRGENGN 301
Query: 323 DHCSWCHYLSCVPTSRWSC 341
+HCSWCHYLSCVPTS+W C
Sbjct: 302 NHCSWCHYLSCVPTSKWEC 320
>gi|302776526|ref|XP_002971421.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
gi|300160553|gb|EFJ27170.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
Length = 379
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/347 (58%), Positives = 255/347 (73%), Gaps = 16/347 (4%)
Query: 4 RESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIP 63
RE+ P + I+ KG S G +V+PV P + Y E+ ++WLIP
Sbjct: 3 REAAPPLDIE--RKGSFSSHRGRSVYPV-----------PASSSYEEMPPRASRISWLIP 49
Query: 64 CFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDV 123
FVVAN+ +F++TMYVNNCPKNS +C FL R SF+ ++NPLLGPSS TL+KMGAL+
Sbjct: 50 LFVVANVIVFIVTMYVNNCPKNSFNCRLTFLKRLSFESLRDNPLLGPSSETLKKMGALNS 109
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ VV +HQGWRLI+C WLH GV H+LANM+ LL+IGIRLE+EFGF+++GLLY++SGFGGS
Sbjct: 110 TLVVKRHQGWRLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLLYLLSGFGGS 169
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGIL 241
LLSALFIQ ISVGASGALFGLLG+M+SELITNW+IY+NK +TLV+II INLAVGIL
Sbjct: 170 LLSALFIQDRISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLVIIIGINLAVGIL 229
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE-QRYALSGYSALSRRKFMTYQCILWIVS 300
PHVDNFAHIGGF+SGFLLGFV L+RPQ GWV Q +A A + + YQ +L IV+
Sbjct: 230 PHVDNFAHIGGFVSGFLLGFVLLMRPQLGWVRHQGHAGMPGGAPVKSRHKIYQIVLLIVA 289
Query: 301 LVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
++L++ G + + +L + VD N CSWCHYLSCVPTS W+C F
Sbjct: 290 VLLLVAGYSTAIALLYKEVDVNKKCSWCHYLSCVPTSHWNCNGSKTF 336
>gi|449494245|ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/319 (64%), Positives = 254/319 (79%), Gaps = 11/319 (3%)
Query: 32 EEMDRPQGVSAPPPAVYGEIKH----SKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV 87
+++R + PP Y + K+W +WL+P FVVAN+AMF++ MYVNNCPK+S+
Sbjct: 4 RDLERGGAKTNNPPGNYSNSYYQETSEKQWTSWLVPMFVVANVAMFIVVMYVNNCPKHSL 63
Query: 88 ---SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGG 144
CVARFLGRFSF+P + NPL GPSS TLQK+GAL+ K+V HQ WRLIT WLH G
Sbjct: 64 GSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLITGIWLHAG 123
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFG 204
V H+LANMLSL+ IGIRLEQ+FGFIRVG+LY++SG GGS+LS+LFIQ+NISVGASGALFG
Sbjct: 124 VIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISVGASGALFG 183
Query: 205 LLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
LLG+MLSEL+TNWTIYT+K +TL+VII INLAVGILPHVDNFAHIGGF++GFLLGF+
Sbjct: 184 LLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFI 243
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
L+RPQFGW+E+R+ + A+ + K YQ IL V+L L+IVG T+GLVML RG + N
Sbjct: 244 LLLRPQFGWIERRHLPANSRAVPKHKL--YQYILCFVALALLIVGFTIGLVMLFRGENGN 301
Query: 323 DHCSWCHYLSCVPTSRWSC 341
+HCSWCHYLSCVPTS+W C
Sbjct: 302 NHCSWCHYLSCVPTSKWEC 320
>gi|224122384|ref|XP_002318821.1| predicted protein [Populus trichocarpa]
gi|222859494|gb|EEE97041.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/299 (64%), Positives = 238/299 (79%), Gaps = 9/299 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-----SVSCVARFLGRFSFQPFKE 104
E + W +WL+P FVVA++ +F++ MY+NNCPK+ C ARFLGRFSF+P K+
Sbjct: 1 EDAEAHYWTSWLVPMFVVAHVVVFIVVMYINNCPKHLHTRFEGKCAARFLGRFSFEPLKD 60
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL GPSS TL++ GAL+ +KVV KHQGWRLI+C WLH G+ H+LANMLSL+ IGIRLEQ
Sbjct: 61 NPLFGPSSATLERFGALEWTKVVHKHQGWRLISCIWLHAGIIHLLANMLSLVFIGIRLEQ 120
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK- 223
+FGF+R+G++Y++SGFGGS+LS+LFI+++ISVGASGALFGLLG+MLSELITNW+IYTNK
Sbjct: 121 QFGFVRIGIVYLLSGFGGSVLSSLFIRNSISVGASGALFGLLGAMLSELITNWSIYTNKT 180
Query: 224 -HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS 282
TL+VI AINLA+GILP VDNFAHIGGF+SGFLLGFV L R Q+GW +R SG
Sbjct: 181 AALFTLLVITAINLAIGILPRVDNFAHIGGFLSGFLLGFVLLPRSQYGWQGRRNLPSGVG 240
Query: 283 ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
S+ K YQ LW+VS+ L+IVG T+ LVML +G + NDHC WCHYLSCVPTSRW C
Sbjct: 241 FKSKLK--AYQYALWLVSVALLIVGFTVALVMLFKGKNGNDHCHWCHYLSCVPTSRWKC 297
>gi|242042499|ref|XP_002468644.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
gi|241922498|gb|EER95642.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
Length = 326
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 243/305 (79%), Gaps = 8/305 (2%)
Query: 44 PPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS-----CVARFLGRFS 98
P +Y + + ++WV W++P F VANI +FVITMYVNNCP ++ + CVARFLGRFS
Sbjct: 21 PSPLYPQHEGEREWVPWIVPVFFVANITVFVITMYVNNCPTHTTTPRDAKCVARFLGRFS 80
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
FQP ++NPLLGPSS TL KMGAL KVV HQGWRL++ WLH GV H++ANML LL +
Sbjct: 81 FQPLRQNPLLGPSSATLTKMGALVWEKVVHHHQGWRLLSSMWLHAGVLHLVANMLCLLFV 140
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G+RLEQ+FG++R+G +YI+SG GG++LS+LFI+++ISVGASGALFGLLG+MLSELITNWT
Sbjct: 141 GMRLEQQFGYVRIGAIYILSGLGGAVLSSLFIRNHISVGASGALFGLLGAMLSELITNWT 200
Query: 219 IYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
IYTNK TL+ + A+NL +GILPHV+NFAHIGGF++GFLLG V L+RP FGW+E RY
Sbjct: 201 IYTNKAVAVATLLFVAAVNLVLGILPHVNNFAHIGGFLAGFLLGLVVLMRPHFGWME-RY 259
Query: 277 ALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPT 336
++ + + RK++ YQ IL V+L+L++VG +G+ M+ RG +AND C WCHYLSCVPT
Sbjct: 260 SMPAGAPCTARKYLAYQWILLAVALLLLVVGFAVGMAMVFRGSNANDSCHWCHYLSCVPT 319
Query: 337 SRWSC 341
+RW+C
Sbjct: 320 ARWNC 324
>gi|359490352|ref|XP_003634078.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 324
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/292 (64%), Positives = 239/292 (81%), Gaps = 8/292 (2%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPS 111
+W +WL+P FVVAN+A+FV+ MY+NNCPK + CVA FLGRFSFQP KENPL GPS
Sbjct: 30 QWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPS 89
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
S TL+K+GAL+ KVV KHQGWRL+TC WLH G+ H+L NMLSL++IGIRLEQ+FGF+R+
Sbjct: 90 SKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRI 149
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
G++Y++SGFGGS+LS+LFIQ++ISVGASGALFGLLG+MLSELITNW++YTN+ LTL+
Sbjct: 150 GVIYLLSGFGGSVLSSLFIQNSISVGASGALFGLLGAMLSELITNWSMYTNRAAALLTLL 209
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
VI+A+NL VGILP V+NFAHIGGF++GF LGF+ + RPQFGW+E R + + K+
Sbjct: 210 VIVAVNLTVGILPRVNNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPADVRV--KSKY 267
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ + W+VSLVL+I G T+GLVML +G + ++HC WCHYLSCVPTS W C
Sbjct: 268 KAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSEHCHWCHYLSCVPTSSWKC 319
>gi|225455416|ref|XP_002279077.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297741091|emb|CBI31822.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/292 (64%), Positives = 239/292 (81%), Gaps = 8/292 (2%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPS 111
+W +WL+P FVVAN+A+FV+ MY+NNCPK + CVA FLGRFSFQP KENPL GPS
Sbjct: 31 QWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPS 90
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
S TL+K+GAL+ KVV KHQGWRL+TC WLH G+ H+L NMLSL++IGIRLEQ+FGF+R+
Sbjct: 91 SKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRI 150
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
G++Y++SGFGGS+LS+LFIQ++ISVGASGALFGLLG+MLSELITNW++YTN+ LTL+
Sbjct: 151 GVIYLLSGFGGSVLSSLFIQNSISVGASGALFGLLGAMLSELITNWSMYTNRAAALLTLL 210
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
VI+A+NL VGILP V+NFAHIGGF++GF LGF+ + RPQFGW+E R + + K+
Sbjct: 211 VIVAVNLTVGILPRVNNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPADVRV--KSKY 268
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ + W+VSLVL+I G T+GLVML +G + ++HC WCHYLSCVPTS W C
Sbjct: 269 KAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSEHCHWCHYLSCVPTSSWKC 320
>gi|326514946|dbj|BAJ99834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/301 (62%), Positives = 238/301 (79%), Gaps = 10/301 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS----CVARFLGRFSFQPFKEN 105
E +KW WL+P +VA +A+FV+ M+VN+CP++ + CVA FL RFSFQP +EN
Sbjct: 24 ESAGDRKWWPWLVPTVIVACVAVFVVEMWVNDCPRHGSALGGGCVAGFLRRFSFQPLREN 83
Query: 106 PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQE 165
PLLGPSS TL KMGALD +KVV +HQGWRLI+C WLH G+ H++ +MLSLL IGIRLEQ+
Sbjct: 84 PLLGPSSTTLGKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVDMLSLLFIGIRLEQQ 143
Query: 166 FGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK- 223
FGF+R+G +Y++SGFGGS++SALF+++N ISVGASGALFGLLGSMLSEL+ NWTIY+NK
Sbjct: 144 FGFVRIGAIYLLSGFGGSVMSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKV 203
Query: 224 -HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS 282
+TL+ IIAIN+A+GILPH DNFAHIGGF++GFLLGFV L RPQFGW+E R L +
Sbjct: 204 AAIITLLFIIAINVAIGILPHADNFAHIGGFLTGFLLGFVLLARPQFGWLE-RSELPHTN 262
Query: 283 ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
K+ YQ +LW+V+ VL++VG T+ LVML +G + ND C WCHYL+CVPTSRW C
Sbjct: 263 --QPPKYKPYQYVLWVVAFVLLLVGFTISLVMLFKGKNGNDGCHWCHYLNCVPTSRWKCD 320
Query: 343 T 343
T
Sbjct: 321 T 321
>gi|115477653|ref|NP_001062422.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|42408095|dbj|BAD09236.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113624391|dbj|BAF24336.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|215686417|dbj|BAG87702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201559|gb|EEC83986.1| hypothetical protein OsI_30137 [Oryza sativa Indica Group]
gi|222640971|gb|EEE69103.1| hypothetical protein OsJ_28172 [Oryza sativa Japonica Group]
Length = 323
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 236/300 (78%), Gaps = 11/300 (3%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV-----SCVARFLGRFSFQPFKENP 106
++W WL+P +VA I +F++ M+VN+CP++ SCVA FL +F+FQP +ENP
Sbjct: 27 DEERRWWPWLVPTVLVACIVVFLVEMFVNDCPRHGSPLRGESCVAGFLHQFAFQPLRENP 86
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
LLGPSS TL+KMGALD +KVV +HQ WRLI+C WLH G+ H++ NMLSLL IG+RLEQ+F
Sbjct: 87 LLGPSSATLEKMGALDWAKVVHQHQAWRLISCIWLHAGLIHLIVNMLSLLFIGLRLEQQF 146
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK-- 223
GF+R+G++Y++SGFGGS+LS LF+++N ISVGASGALFGLLGSMLSELI NWTIY+NK
Sbjct: 147 GFVRIGIIYLLSGFGGSVLSVLFLRNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAA 206
Query: 224 HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSA 283
+TL+ IIAINLA+GILPH DNFAHIGGF++GFLLGFV L RPQFGW+E R+ L +
Sbjct: 207 AIITLLFIIAINLAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWME-RHELPQTN- 264
Query: 284 LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
RK+ YQ +LW V+L L++VG + LVML +G + ND C WCHYL+C+PTSRW C T
Sbjct: 265 -QPRKYRAYQYVLWAVALFLLLVGFVIALVMLFKGKNGNDGCHWCHYLNCIPTSRWKCST 323
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 236/296 (79%), Gaps = 7/296 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCP---KNSVSCV-ARFLGRFSFQPFKENPL 107
+ ++WV W++P FV AN+A+F + MY NNCP + CV A FL RF+FQP +NPL
Sbjct: 27 EEEREWVPWIVPVFVAANVALFAVAMYANNCPAHARGRRKCVGAGFLRRFAFQPLSQNPL 86
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS TLQK+GAL KVV +HQGWRL+TC WLH GV H+LANMLSL+++G+RLEQ+FG
Sbjct: 87 LGPSSATLQKLGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFG 146
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
F+RVG++Y++SG GGS++S+LFI+ NISVGASGALFGLLG+MLSEL TNWTIYTNK
Sbjct: 147 FVRVGVIYLVSGVGGSVMSSLFIRDNISVGASGALFGLLGAMLSELFTNWTIYTNKAAAL 206
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+TL+ +IA+NLA+GILPHVDNFAHIGGF++GFLLGFV L+RP +GW QRY L
Sbjct: 207 VTLLFVIAVNLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWA-QRYVLPSSVKDV 265
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
RKF+ YQ L V+ VLV+VGL +G+ ML RGV+ N+HC WCHYLSCVPT+RWSC
Sbjct: 266 GRKFLAYQWALLAVASVLVVVGLAVGMAMLFRGVNGNEHCQWCHYLSCVPTARWSC 321
>gi|302765296|ref|XP_002966069.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
gi|300166883|gb|EFJ33489.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
Length = 335
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/293 (64%), Positives = 234/293 (79%), Gaps = 3/293 (1%)
Query: 58 VTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
++WLIP FVVAN+ +F++TMYVNNCPKNS +C FL R SF+ ++NPLLGPSS TL+K
Sbjct: 8 ISWLIPLFVVANVIVFIVTMYVNNCPKNSFNCRLTFLKRLSFESLRDNPLLGPSSETLKK 67
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGAL+ + VV KHQGWRLI+C WLH GV H+LANM+ LL+IGIRLE+EFGF+++GLLY++
Sbjct: 68 MGALNSTLVVKKHQGWRLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLLYLL 127
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SGFGGSLLSALFIQ ISVGASGALFGLLG+M+SELITNW+IY+NK +TLV+II IN
Sbjct: 128 SGFGGSLLSALFIQDRISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLVIIIGIN 187
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE-QRYALSGYSALSRRKFMTYQC 294
LAVGILPHVDNFAHIGGF+SGFLLGFV L+RPQ GWV Q +A A + + YQ
Sbjct: 188 LAVGILPHVDNFAHIGGFVSGFLLGFVLLMRPQLGWVRHQGHAGMPGGAPVKSRHKIYQI 247
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
+L IV+++L++ G + + +L + VD N CSWCHYLSCVPTS W+C F
Sbjct: 248 VLLIVAVLLLVAGYSTAIALLYKEVDVNKKCSWCHYLSCVPTSHWNCNGSKTF 300
>gi|145329975|ref|NP_001077973.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|77999982|dbj|BAE46872.1| Rhomboid family protein AtRBL1 [Arabidopsis thaliana]
gi|330253109|gb|AEC08203.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 346
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/338 (58%), Positives = 235/338 (69%), Gaps = 33/338 (9%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
AR+ G++IKV + + + N + A + E + K W WL+
Sbjct: 2 ARDRREGLEIKVVNPPA--AATNNVAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLV 59
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
P VVANIA+F I+M++NNCPKNS C+ARFLGRF+FQP KENPLLGPSS+TL+KMGALD
Sbjct: 60 PAIVVANIALFAISMFINNCPKNSAYCLARFLGRFAFQPMKENPLLGPSSLTLEKMGALD 119
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
VS VV KH+ WRL TC WLH GVFH+LANMLSL+ IGIRLEQEFGF+R+GLLY+ISGFGG
Sbjct: 120 VSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGG 179
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK------------------- 223
SLLS+LF ++ ISVGASGALFGLLG+MLSEL+TNWTIY NK
Sbjct: 180 SLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSI 239
Query: 224 -----------HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV 272
LTL+ IIAINLAVGILPHVDNFAH+GGF SGFLLGFVFLIRPQ+G+
Sbjct: 240 MSLVFLHLQFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYF 299
Query: 273 EQRYALSGYSALS-RRKFMTYQCILWIVSLVLVIVGLT 309
QR GY+A S + K YQ +LWI SLVL+I G T
Sbjct: 300 NQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLIAGYT 337
>gi|255537321|ref|XP_002509727.1| conserved hypothetical protein [Ricinus communis]
gi|223549626|gb|EEF51114.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/292 (63%), Positives = 220/292 (75%), Gaps = 30/292 (10%)
Query: 54 SKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLG 109
K+W +WLIP FVVANIA+F+ MYVNNCPKN++ +CVA+FLGR SFQP KENPL G
Sbjct: 30 DKQWTSWLIPTFVVANIAVFIAVMYVNNCPKNNLGFEGNCVAKFLGRLSFQPLKENPLFG 89
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PSS TL+ MGAL+ +KVV HQGWRLITC WLH GV H+LANMLSL+ IGIRLEQ+FGF+
Sbjct: 90 PSSSTLENMGALEWNKVVHGHQGWRLITCMWLHAGVVHLLANMLSLIFIGIRLEQQFGFV 149
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
RVGL+Y+++GFGGS+LSALFIQ NISVGAS LTLV
Sbjct: 150 RVGLIYLLAGFGGSILSALFIQRNISVGASA------------------------LLTLV 185
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
+IIAINLAVGILPHVDNFAHIGGF++GF LGFV L+RPQFGW E R+ + SR K
Sbjct: 186 IIIAINLAVGILPHVDNFAHIGGFLTGFFLGFVILLRPQFGWYESRHLPADARVKSRHK- 244
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ ++++VL++ G T+GLVML RGV+ NDHCSWCHYLSCVPTS+W C
Sbjct: 245 -AYQYAFLLIAVVLLVAGFTVGLVMLFRGVNGNDHCSWCHYLSCVPTSKWKC 295
>gi|297810841|ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319141|gb|EFH49563.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 253/350 (72%), Gaps = 16/350 (4%)
Query: 1 MAARESPPGIQIKVNSKG-GGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVT 59
MA + ++ +G G G N + P P V+ +G+ S +W +
Sbjct: 1 MAVGDDDLENRMSAKDRGIGSRGGDRNRIGPP-----PLPVALSSSTEFGDNALSSRWTS 55
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVS------CVARFLGRFSFQPFKENPLLGPSSV 113
WL+P FVVAN+A+FV+ M+VNNCPK+ S CVARFLGR SF+P + NPL GPSS
Sbjct: 56 WLVPMFVVANVAIFVVAMFVNNCPKHFESHRLRGNCVARFLGRLSFEPLRTNPLFGPSSH 115
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL+K+GAL+ SKVV+K +GWRL+TC WLH GV H+ ANMLSL+ IGIRLEQ+FGF+R+G+
Sbjct: 116 TLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLIFIGIRLEQQFGFVRIGV 175
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+Y++SG GGS+LS+LFI+++ISVGASGALFGLLGSMLSEL TNWTIY+NK LTL+ +
Sbjct: 176 IYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFV 235
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMT 291
I INLA+GILPHVDNFAH+GGF++GFLLGF+ L RPQF W+ + + G R K+
Sbjct: 236 ILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLARVHMPQGTPL--RYKYKP 293
Query: 292 YQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ +LW++SLVL+I G + L+ML RG + NDHC WC YL CVPTS W C
Sbjct: 294 YQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCRYLRCVPTSSWRC 343
>gi|297837099|ref|XP_002886431.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
gi|297332272|gb|EFH62690.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/300 (63%), Positives = 237/300 (79%), Gaps = 10/300 (3%)
Query: 48 YGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN----SVSCVARFLGRFSFQPFK 103
Y E W +WLIP VVAN+A+F+ M+VN+CPK + CVARFLGRFSFQP K
Sbjct: 22 YDESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGANKECVARFLGRFSFQPLK 81
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
ENPL GPSS TL+KMGAL+ KVV +HQGWRL++C WLH G+ H+L NMLSL+ IGIRLE
Sbjct: 82 ENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLE 141
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
Q+FGFIRVGL+Y+ISG GGS+LS+LF+Q +ISVGASGALFGLLG+MLSEL+TNWTIY NK
Sbjct: 142 QQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANK 201
Query: 224 --HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGY 281
+TL+ IIAINLA+G+LP VDNFAHIGGF++GF LGFV L+RPQ+GW R
Sbjct: 202 AAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASRTN---- 257
Query: 282 SALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++ ++RK+ YQ L++V++VL++VGLT+ VML +G + N HC WCHYLSC PTS+W+C
Sbjct: 258 TSRTKRKYSMYQYALFVVAVVLLVVGLTVASVMLFKGENGNKHCKWCHYLSCFPTSKWTC 317
>gi|326532882|dbj|BAJ89286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/299 (61%), Positives = 234/299 (78%), Gaps = 10/299 (3%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCP------KNSVSCV-ARFLGRFSFQPFKE 104
+ ++WV W++P FV AN+A+F + MY NNCP ++ CV A L RF+F+P +
Sbjct: 26 EEEREWVPWIVPVFVAANVALFAVAMYANNCPAHARGGRSGRRCVGAGLLRRFAFEPLSQ 85
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPLLGPSS TLQK+GAL KVV + QGWRL+TC WLH GV H+LANMLSL+++G+RLEQ
Sbjct: 86 NPLLGPSSATLQKLGALVWEKVVHEQQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQ 145
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK- 223
+FGF+RVG++Y++SG GGS++S+LFI+ NISVGASGALFGLLG+MLSEL TNWTIYTNK
Sbjct: 146 QFGFVRVGVIYLVSGVGGSVMSSLFIRDNISVGASGALFGLLGAMLSELFTNWTIYTNKA 205
Query: 224 -HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS 282
+TL+ +IA+NLA+GILPHVDNFAHIGGF++GFLLGFV L+RP +GW QRY L
Sbjct: 206 AALVTLLFVIAVNLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWA-QRYVLPSSV 264
Query: 283 ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
RKF+ YQ L + VLV+VGL +G+ ML RGV+ N+HC WCHYLSCVPT+RWSC
Sbjct: 265 KDVGRKFLAYQWALLAAASVLVVVGLAVGMAMLFRGVNGNEHCQWCHYLSCVPTARWSC 323
>gi|356559853|ref|XP_003548211.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/307 (63%), Positives = 242/307 (78%), Gaps = 11/307 (3%)
Query: 41 SAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGR 96
+AP VY H W +WL+P FV N+ +FV+ MY+N+CP+ ++ CVARFLGR
Sbjct: 25 AAPTSYVYDPEVH---WTSWLVPLFVAVNVVVFVVAMYLNDCPRKNLGFEGECVARFLGR 81
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
FSFQP +ENPL GPSS TL KMGAL VV+ HQ WRL+TC WLH GV H+ ANMLSL+
Sbjct: 82 FSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLV 141
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+LFI++NISVGASGALFGLLG+MLSELITN
Sbjct: 142 FIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITN 201
Query: 217 WTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
W+IYTNK TL+ II INLA+G+LPHVDNFAHIGGF++GFLLGF+ L+RPQFGW+EQ
Sbjct: 202 WSIYTNKAAALFTLLFIIVINLAIGMLPHVDNFAHIGGFLTGFLLGFILLLRPQFGWLEQ 261
Query: 275 RYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
R +G + K+ YQ +LWIVS +L+IVGL++ LVML RG + DHC WCHYL+CV
Sbjct: 262 RRPPAGVRL--KSKYKAYQYVLWIVSAILLIVGLSIALVMLFRGENGYDHCHWCHYLTCV 319
Query: 335 PTSRWSC 341
PTS+W C
Sbjct: 320 PTSKWKC 326
>gi|15221690|ref|NP_176500.1| rhomboid -like 2 [Arabidopsis thaliana]
gi|12323258|gb|AAG51610.1|AC010795_14 membrane protein, putative; 61952-60281 [Arabidopsis thaliana]
gi|28393358|gb|AAO42103.1| putative membrane protein [Arabidopsis thaliana]
gi|28827620|gb|AAO50654.1| putative membrane protein [Arabidopsis thaliana]
gi|77999980|dbj|BAE46871.1| Rhomboid family protein AtRBL2 [Arabidopsis thaliana]
gi|332195937|gb|AEE34058.1| rhomboid -like 2 [Arabidopsis thaliana]
Length = 317
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/300 (63%), Positives = 239/300 (79%), Gaps = 10/300 (3%)
Query: 48 YGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN----SVSCVARFLGRFSFQPFK 103
Y E W +WLIP VVAN+A+F+ M+VN+CPK + CVARFLGRFSFQP K
Sbjct: 22 YEESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVARFLGRFSFQPLK 81
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
ENPL GPSS TL+KMGAL+ KVV +HQGWRL++C WLH G+ H+L NMLSL+ IGIRLE
Sbjct: 82 ENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLE 141
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
Q+FGFIRVGL+Y+ISG GGS+LS+LF+Q +ISVGASGALFGLLG+MLSEL+TNWTIY NK
Sbjct: 142 QQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANK 201
Query: 224 --HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGY 281
+TL+ IIAINLA+G+LP VDNFAHIGGF++GF LGFV L+RPQ+GW R
Sbjct: 202 AAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASRTN---- 257
Query: 282 SALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++ ++RK+ YQ +L++VS+VL++VGLT+ LVML +G + N HC WCHYLSC PTS+W+C
Sbjct: 258 TSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLFKGENGNKHCKWCHYLSCFPTSKWTC 317
>gi|226494811|ref|NP_001140268.1| uncharacterized protein LOC100272312 [Zea mays]
gi|194698764|gb|ACF83466.1| unknown [Zea mays]
gi|195610418|gb|ACG27039.1| membrane protein [Zea mays]
gi|413919340|gb|AFW59272.1| membrane protein [Zea mays]
Length = 340
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/309 (59%), Positives = 233/309 (75%), Gaps = 10/309 (3%)
Query: 38 QGVSAPPPAVYGE--IKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR-FL 94
G PP Y + H + +WL+P V+AN+ MFV+ M+ NNCP++ CV R FL
Sbjct: 35 NGPYTPPSPFYYDPAAAHGRHHWSWLVPLVVIANVLMFVLVMFYNNCPRSGGDCVGRGFL 94
Query: 95 GRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLS 154
RFSFQP KENPLLGP++ TLQ+ GALD KVV +Q WRL +C WLH G+ H+LANM+S
Sbjct: 95 RRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMIS 154
Query: 155 LLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI 214
L+ IG+RLEQ+FGF +VGL+Y++SGFGGS+LS FI+ +SVGASGALFGLLG+MLSELI
Sbjct: 155 LIFIGVRLEQQFGFWKVGLVYLVSGFGGSVLSVFFIRKGVSVGASGALFGLLGAMLSELI 214
Query: 215 TNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV 272
TNW+IYTN+ L L++I AINLA+GILPHVDNFAHIGGF +GFLLGFV LI+PQFGW+
Sbjct: 215 TNWSIYTNRFAAMLNLIIIAAINLALGILPHVDNFAHIGGFATGFLLGFVLLIQPQFGWL 274
Query: 273 EQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLS 332
EQ + A ++ K+ YQ IL + +LVL+ G +GLVM+ RG + NDHCSWCHYL+
Sbjct: 275 EQPFG-----AKTKSKYKAYQIILLLAALVLLAAGFAVGLVMVFRGENGNDHCSWCHYLT 329
Query: 333 CVPTSRWSC 341
CVPTS W C
Sbjct: 330 CVPTSSWKC 338
>gi|225426828|ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297742575|emb|CBI34724.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/332 (62%), Positives = 255/332 (76%), Gaps = 18/332 (5%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVI 75
+GGG GN HP P S+ Y E + W +WLIP FVVAN+A+FV+
Sbjct: 7 ERGGGMKNRGNNGHP------PGYYSS---TYYAEASETH-WTSWLIPMFVVANVAVFVV 56
Query: 76 TMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQ 131
MYVN+CPK + +CVA+FL R SFQP +ENPL GPSS TL+K+G L+ +KVV Q
Sbjct: 57 VMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQ 116
Query: 132 GWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ 191
GWRL+TC WLH GV H+LANMLSL+ IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+LFIQ
Sbjct: 117 GWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQ 176
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAH 249
NISVGASGALFGLLG+MLSELITNW+IYTNK TLVVIIAINLAVGILPHVDNFAH
Sbjct: 177 HNISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFAH 236
Query: 250 IGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLT 309
IGGF++GFLLGF+ L+RPQFGWV++++ + S+ K YQ W+V++ L+IVG T
Sbjct: 237 IGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARVKSKHK--VYQYAFWLVAMALLIVGFT 294
Query: 310 LGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+GLVML RG + NDHCSWCHYLSCVPTS+W C
Sbjct: 295 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 326
>gi|18409916|ref|NP_566989.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|119360121|gb|ABL66789.1| At3g53780 [Arabidopsis thaliana]
gi|332645621|gb|AEE79142.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 270
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/273 (65%), Positives = 220/273 (80%), Gaps = 6/273 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MG LDV KVV +GWRL++CNWLHGGV H+L NML+LL IGIR+E+EFGFIR+GLLY+I
Sbjct: 1 MGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLI 60
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SGFGGS+LSALF++SNISVGASGA+FGLLG MLSE+ NWTIY+NK +TLV+I+A+N
Sbjct: 61 SGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVN 120
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
L +G+LP VDNFAHIGGF +GFLLGFV LIRP +GW+ QR +G A R F YQ I
Sbjct: 121 LGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQR---NGPGAKPHR-FKIYQGI 176
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGN 355
LW +SL++++ G +GL+ L VD N+HCSWCHYLSCVPTS+WSC EPA C+TTQ GN
Sbjct: 177 LWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASCTTTQLGN 236
Query: 356 QLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
QL++TC NGKS YIL+NPS S+I SLC +LC
Sbjct: 237 QLSMTCLRNGKSASYILANPSDSRINSLCVQLC 269
>gi|217072548|gb|ACJ84634.1| unknown [Medicago truncatula]
gi|388512075|gb|AFK44099.1| unknown [Medicago truncatula]
Length = 326
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 243/306 (79%), Gaps = 9/306 (2%)
Query: 42 APPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRF 97
A PP G + W +WL+P FVVAN+ +FV+ MY+NNCP ++ +CV +FLGRF
Sbjct: 21 AVPPTSSGYDPETS-WTSWLVPMFVVANLVVFVVAMYINNCPSKNLGFDGACVLKFLGRF 79
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
SFQP KENPLLGPSS TL KMGAL VV+ HQGWRL++C WLH G+ H+ ANM+SL+
Sbjct: 80 SFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQGWRLVSCIWLHAGIIHLAANMISLVF 139
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
IGIRLEQ+FGF+R+G++Y++SGFGGS+LSALFI+ +ISVGASGALFGLLG+MLSELITNW
Sbjct: 140 IGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRKSISVGASGALFGLLGAMLSELITNW 199
Query: 218 TIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
+IYTNK +TL+ II INL +G+LPHVDNFAHIGGF++GFLLGF+FL RPQFGW+ QR
Sbjct: 200 SIYTNKVAALMTLLFIIVINLVIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQR 259
Query: 276 YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+ +G + K+ YQ +LW+VSLVL+I GL +GLVMLLRG DHC WCHYL+CVP
Sbjct: 260 HVPAGVRL--KSKYKVYQYVLWVVSLVLLIAGLCIGLVMLLRGESGYDHCHWCHYLTCVP 317
Query: 336 TSRWSC 341
TS+W C
Sbjct: 318 TSKWKC 323
>gi|357165337|ref|XP_003580349.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 343
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/293 (60%), Positives = 225/293 (76%), Gaps = 9/293 (3%)
Query: 53 HSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-SVSCVAR-FLGRFSFQPFKENPLLGP 110
K+ TWL+P V+AN+AMF++ MY N+CP++ + CV R L RFSFQP KENPL GP
Sbjct: 54 QEKQHRTWLVPLVVLANVAMFIVVMYYNDCPRSGNGDCVGRGVLRRFSFQPLKENPLFGP 113
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S+ TL K G LD KVV ++ WRL T WLH G+ H+ ANM+SL+ +G+RLEQ+FGF +
Sbjct: 114 SATTLGKYGGLDRYKVVRGNEAWRLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGFWK 173
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTL 228
VGL+Y++SG GGS+LS LFI++ +SVGASGALFGLLG+MLSELITNW+IYTN+ L
Sbjct: 174 VGLVYLVSGLGGSILSVLFIRNGVSVGASGALFGLLGAMLSELITNWSIYTNRIAAMANL 233
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
++I AINLA+GILPHVDNFAHIGGF +GFLLGFV LI+P+FGW+EQ + A S+ K
Sbjct: 234 IIIAAINLALGILPHVDNFAHIGGFATGFLLGFVLLIQPRFGWLEQPFG-----AKSKSK 288
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ Q IL +V+L+L I G +GL+M+ RGV+ NDHCSWCHYL+CVPTS W C
Sbjct: 289 YTACQIILLVVALILSIAGFAVGLLMVFRGVNGNDHCSWCHYLTCVPTSSWKC 341
>gi|363808368|ref|NP_001242000.1| uncharacterized protein LOC100784671 [Glycine max]
gi|255639055|gb|ACU19828.1| unknown [Glycine max]
Length = 330
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/307 (62%), Positives = 240/307 (78%), Gaps = 11/307 (3%)
Query: 41 SAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGR 96
+AP VY H W +WL+P FV N+ +F + MYVN+CP+ ++ CVARFLGR
Sbjct: 26 AAPTSYVYDPEVH---WTSWLVPLFVAVNVVVFFVVMYVNDCPRKNLGFEGDCVARFLGR 82
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
FSFQP +ENPL GPSS TL KMGAL VV+ HQ WRL+TC WLH GV H+ ANMLSL+
Sbjct: 83 FSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLV 142
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+LFI++NISVGASGALFGLLG+MLSELITN
Sbjct: 143 FIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITN 202
Query: 217 WTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
W+IYTNK TL+ II INLA+G+LPHVD+FAHIGGF+SGFLLGF+ L+RPQFGW+EQ
Sbjct: 203 WSIYTNKAAALFTLLFIIVINLAIGMLPHVDDFAHIGGFLSGFLLGFILLLRPQFGWLEQ 262
Query: 275 RYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
+ +G + K+ YQ +LWIVS +L+IVGL++ LVML RG DHC WCHYL+CV
Sbjct: 263 QRLHAGVHL--KSKYKAYQYVLWIVSAILLIVGLSIALVMLFRGESGYDHCHWCHYLTCV 320
Query: 335 PTSRWSC 341
PTS+W C
Sbjct: 321 PTSKWKC 327
>gi|242074036|ref|XP_002446954.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
gi|241938137|gb|EES11282.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
Length = 340
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/303 (62%), Positives = 232/303 (76%), Gaps = 9/303 (2%)
Query: 43 PPPAVYGEIK-HSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR-FLGRFSFQ 100
P P Y H + +WL+P V+AN+AMFV+ M+ NNCP+ CV R FL RFSFQ
Sbjct: 41 PSPFYYDHAAAHERHHWSWLVPLVVIANVAMFVVVMFYNNCPRGGGDCVGRGFLRRFSFQ 100
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
P KENPLLGP++ TLQK GALD KVV +Q WRL +C WLH G+ H+LANM+SL+ IG+
Sbjct: 101 PLKENPLLGPTAATLQKYGALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMISLIFIGV 160
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
RLEQ+FGF RVGL+Y++SGFGGS+LS LFI+ +SVGASGALFGLLG+MLSELITNW+IY
Sbjct: 161 RLEQQFGFWRVGLVYLVSGFGGSVLSVLFIRKGVSVGASGALFGLLGAMLSELITNWSIY 220
Query: 221 TNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
TN+ L L++I AINLA+GILPHVDNFAHIGGF +GFLLGFV LI+PQFGW+EQ Y
Sbjct: 221 TNRFAAMLNLIIIAAINLALGILPHVDNFAHIGGFATGFLLGFVLLIQPQFGWLEQPYG- 279
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
+ ++ K+ YQ IL I +LVL+ GL +GLVM+ RG + NDHC WCHYL+CVPTS
Sbjct: 280 ----SKTKSKYKAYQIILLIAALVLLAAGLAVGLVMVFRGENGNDHCGWCHYLTCVPTSS 335
Query: 339 WSC 341
W C
Sbjct: 336 WKC 338
>gi|297849660|ref|XP_002892711.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338553|gb|EFH68970.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 228/296 (77%), Gaps = 7/296 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNS----VSCVARFLGRFSFQPFKENPL 107
+ +W +WL P VVAN+A+F++ M++N+CPK + CVA+FLGRFSFQP +ENPL
Sbjct: 13 RGDTQWTSWLTPTIVVANVAIFIVVMFINDCPKTTRGANEDCVAKFLGRFSFQPLRENPL 72
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS TL+K+GALD KVV ++ WRLIT WLH G+FH+ NM +++ GIRLEQ+FG
Sbjct: 73 LGPSSSTLEKLGALDWRKVVQGNEKWRLITAMWLHAGIFHLFTNMFNVIFFGIRLEQQFG 132
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
F+R+GL+Y+ISGFGGS+LSALF+Q++ISVGASGAL GL+G+MLSEL+ NWTIY +K
Sbjct: 133 FLRIGLIYLISGFGGSILSALFLQNSISVGASGALLGLIGAMLSELVINWTIYESKLCAL 192
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+++ IIA++LA+G+LP VDNFAHIGG ++GF LGF+ LI+PQ GW E R + S Y A +
Sbjct: 193 FSILFIIALDLAIGLLPWVDNFAHIGGLLTGFFLGFILLIQPQLGWEESRNS-SQYGARA 251
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ K+ Q +L+ ++ VLV+ LT+G+VML +G + N HC WCH L C PTS+WSC
Sbjct: 252 KSKYNPCQYVLFFIAAVLVVASLTIGIVMLFKGENGNKHCKWCHRLDCYPTSKWSC 307
>gi|194703068|gb|ACF85618.1| unknown [Zea mays]
gi|195643104|gb|ACG41020.1| membrane protein [Zea mays]
gi|219888419|gb|ACL54584.1| unknown [Zea mays]
gi|224031257|gb|ACN34704.1| unknown [Zea mays]
gi|414591379|tpg|DAA41950.1| TPA: membrane protein [Zea mays]
Length = 327
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/301 (63%), Positives = 234/301 (77%), Gaps = 10/301 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKEN 105
E + +KW WL+P +VA IA+FV+ MY NNCPKN CVA FL RFSFQP +EN
Sbjct: 30 EGEEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLREN 89
Query: 106 PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQE 165
PLLGPSS TL+KMGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+
Sbjct: 90 PLLGPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQ 149
Query: 166 FGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK- 223
FGF+R+G +Y++SGFGGS+LSALF+++N ISVGASGALFGLLGSMLSEL+ NWTIY+NK
Sbjct: 150 FGFVRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKA 209
Query: 224 -HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS 282
+TL+ IIA+NLA+GILPH DNFAHIGGF +GFLLGFV L RPQFGW+E
Sbjct: 210 AAIITLLFIIALNLAIGILPHADNFAHIGGFATGFLLGFVLLARPQFGWMEHHELPQTNQ 269
Query: 283 ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
K+ YQ ILW+V+LVL++VG + LVML +G + ND C WCHYL+CVPTS+W C
Sbjct: 270 P---PKYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCN 326
Query: 343 T 343
T
Sbjct: 327 T 327
>gi|326529191|dbj|BAK00989.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 227/299 (75%), Gaps = 12/299 (4%)
Query: 54 SKKWVTWLIPCFVVANIAMFVITMYVNNCPKN------SVSCVARFLGRFSFQPFKENPL 107
++W WL+P + A +++F + MY+N+CP++ CVA FL +FSFQP +ENPL
Sbjct: 31 ERQWWPWLVPTVLGACVSVFAVEMYLNDCPRHGSTLGGDAPCVAGFLRQFSFQPLRENPL 90
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS TL+KMGALD +KVV +HQ WRL +C WLH G+ H++ NM+SLL IGIRLEQ+FG
Sbjct: 91 LGPSSATLEKMGALDWAKVVHQHQWWRLFSCVWLHAGLIHLIVNMMSLLFIGIRLEQQFG 150
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--H 224
F+R+G++Y++SGFGGS+LSALF++++ ISVGASGALFGLLGSMLSELI NWTIY+NK
Sbjct: 151 FVRIGIIYLLSGFGGSVLSALFLRNHYISVGASGALFGLLGSMLSELIMNWTIYSNKAAA 210
Query: 225 FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
TL+ IIAINLA+GILPH DNFAHIGGF+SGFL GFV L RPQFGW+E R+ L
Sbjct: 211 ITTLLFIIAINLAIGILPHADNFAHIGGFVSGFLFGFVLLARPQFGWME-RHELP--QTD 267
Query: 285 SRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ LW +L+ ++VG +GL ML +G + ND C WC YL+CVPTSRW C T
Sbjct: 268 QPPKYKMYQYALWGAALLFLLVGYVVGLAMLFKGKNGNDGCHWCRYLNCVPTSRWKCST 326
>gi|3461845|gb|AAC33231.1| hypothetical protein [Arabidopsis thaliana]
Length = 372
Score = 363 bits (932), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 235/364 (64%), Gaps = 59/364 (16%)
Query: 3 ARESPPGIQIKVNSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLI 62
AR+ G++IKV + + + N + A + E + K W WL+
Sbjct: 2 ARDRREGLEIKVVNPPA--AATNNVAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLV 59
Query: 63 PCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVT-------- 114
P VVANIA+F I+M++NNCPKNS C+ARFLGRF+FQP KENPLLGPSS+T
Sbjct: 60 PAIVVANIALFAISMFINNCPKNSAYCLARFLGRFAFQPMKENPLLGPSSLTWVTLKIST 119
Query: 115 ------------------LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
L+KMGALDVS VV KH+ WRL TC WLH GVFH+LANMLSL+
Sbjct: 120 LFLKIPHLIEIRVSEFEILEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLI 179
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
IGIRLEQEFGF+R+GLLY+ISGFGGSLLS+LF ++ ISVGASGALFGLLG+MLSEL+TN
Sbjct: 180 FIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTN 239
Query: 217 WTIYTNK------------------------------HFLTLVVIIAINLAVGILPHVDN 246
WTIY NK LTL+ IIAINLAVGILPHVDN
Sbjct: 240 WTIYANKVAKSSLVKQAALSMNDVSIMSLVFLHLQFAALLTLIFIIAINLAVGILPHVDN 299
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRKFMTYQCILWIVSLVLVI 305
FAH+GGF SGFLLGFVFLIRPQ+G+ QR GY+A S + K YQ +LWI SLVL+I
Sbjct: 300 FAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLI 359
Query: 306 VGLT 309
G T
Sbjct: 360 AGYT 363
>gi|294845|gb|AAA02747.1| membrane protein [Saccharum hybrid cultivar H65-7052]
Length = 325
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/300 (63%), Positives = 236/300 (78%), Gaps = 9/300 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS---CVARFLGRFSFQPFKENP 106
E +KW WL+P +VA IA+FV+ MY NNCPK+ CVA FL RFSFQP +ENP
Sbjct: 29 EGPEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGGCVAGFLRRFSFQPLRENP 88
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
LLGPSS TL+KMGALD +K+V + QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+F
Sbjct: 89 LLGPSSSTLEKMGALDWNKIVHQDQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQF 148
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK-- 223
GF+R+G +Y++SGFGGS+LSALF+++N ISVGASGALFGLLGSMLSEL+ NWTIY+NK
Sbjct: 149 GFVRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKAA 208
Query: 224 HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSA 283
+TL+ IIA+NLA+GILPHVDNFAHIGGF +GFLLGFV L RPQF W+E R+ L +
Sbjct: 209 AIITLLFIIALNLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWME-RHELPQTN- 266
Query: 284 LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ ILW+V+LVL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 267 -QPPKYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 325
>gi|15222058|ref|NP_172735.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|145323878|ref|NP_001077528.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|334182523|ref|NP_001184975.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|17529034|gb|AAL38727.1| putative membrane protein [Arabidopsis thaliana]
gi|20259083|gb|AAM14257.1| putative membrane protein [Arabidopsis thaliana]
gi|332190800|gb|AEE28921.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190801|gb|AEE28922.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190802|gb|AEE28923.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
Length = 307
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 223/296 (75%), Gaps = 7/296 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPL 107
+ +W WL P VVAN+++F++ MY N+CPK + CVA+ L RFSFQP +ENP
Sbjct: 13 RGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPF 72
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS TL+K+GALD KVV ++ WRLIT WLH G+ H++ NM +++ GIRLEQ+FG
Sbjct: 73 LGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFG 132
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
FIR+GL+Y+ISGFGGS+LSALF+Q +ISVGASGAL GL+G+MLSEL+TNWTIY +K
Sbjct: 133 FIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCAL 192
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
L+ + IIAINLA+G+LP VDNFAHIGG ++GF LGF+ L++PQ GW E R + S Y A +
Sbjct: 193 LSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNS-SQYGARA 251
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
R K+ Q +L+ V+ VLV+ GLT+GLVML G + N HC WCH L C PTS+WSC
Sbjct: 252 RSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307
>gi|9502383|gb|AAF88090.1|AC025417_18 T12C24.28 [Arabidopsis thaliana]
Length = 302
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 223/296 (75%), Gaps = 7/296 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPL 107
+ +W WL P VVAN+++F++ MY N+CPK + CVA+ L RFSFQP +ENP
Sbjct: 8 RGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPF 67
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS TL+K+GALD KVV ++ WRLIT WLH G+ H++ NM +++ GIRLEQ+FG
Sbjct: 68 LGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFG 127
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
FIR+GL+Y+ISGFGGS+LSALF+Q +ISVGASGAL GL+G+MLSEL+TNWTIY +K
Sbjct: 128 FIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCAL 187
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
L+ + IIAINLA+G+LP VDNFAHIGG ++GF LGF+ L++PQ GW E R + S Y A +
Sbjct: 188 LSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNS-SQYGARA 246
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
R K+ Q +L+ V+ VLV+ GLT+GLVML G + N HC WCH L C PTS+WSC
Sbjct: 247 RSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 302
>gi|357159526|ref|XP_003578474.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 330
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 235/296 (79%), Gaps = 10/296 (3%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLGP 110
+KW WL+P +VA IA+FV+ M+VN+CP++ + CV FL RFSFQP +ENPLLGP
Sbjct: 38 RKWWPWLVPTVIVACIAVFVVEMWVNDCPRHGSALGGGCVVGFLRRFSFQPLRENPLLGP 97
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
SS TL KMGALD +KVV +HQGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF+R
Sbjct: 98 SSATLGKMGALDWNKVVHEHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 157
Query: 171 VGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HFLT 227
+G +Y++SGFGGS+LSALF++SN ISVGASGALFGLLGSMLSELI NWTIY+NK +T
Sbjct: 158 IGAIYLLSGFGGSVLSALFLRSNYISVGASGALFGLLGSMLSELIMNWTIYSNKVAAIIT 217
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR 287
L+ IIAIN+A+GILPH DNFAHIGGF++GFLLGFV L RPQFGW+E R L +
Sbjct: 218 LLFIIAINMAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWME-RNELPHTN--QPP 274
Query: 288 KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ +LW+V+L+L++VG LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 275 KYKAYQYVLWVVALLLLLVGFVTSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 330
>gi|115483002|ref|NP_001065094.1| Os10g0521900 [Oryza sativa Japonica Group]
gi|113639703|dbj|BAF27008.1| Os10g0521900, partial [Oryza sativa Japonica Group]
Length = 338
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/251 (67%), Positives = 212/251 (84%), Gaps = 3/251 (1%)
Query: 93 FLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANM 152
FL RFSFQP ENPLLGPSS TLQKMGAL KVV +HQGWRL+TC WLH GV H+LANM
Sbjct: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
Query: 153 LSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSE 212
LSL++IG+RLEQ+FG++R+G++Y++SG GGS+LS+LFI+++ISVGASGALFGLLG+MLSE
Sbjct: 147 LSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSE 206
Query: 213 LITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFG 270
L TNWTIYTNK +TL+++IAINLA+GILPHVDNFAHIGGF++GFLLGF+FL+RP +G
Sbjct: 207 LFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYG 266
Query: 271 WVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHY 330
W+ QRY L + +K++ YQ IL V+ VL ++G +GL ML RGV+AN+ C WCHY
Sbjct: 267 WM-QRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHY 325
Query: 331 LSCVPTSRWSC 341
LSC+PTSRW+C
Sbjct: 326 LSCIPTSRWTC 336
>gi|115459992|ref|NP_001053596.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|38344377|emb|CAE02252.2| OSJNBb0032E06.11 [Oryza sativa Japonica Group]
gi|113565167|dbj|BAF15510.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|215704480|dbj|BAG93914.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 219/289 (75%), Gaps = 13/289 (4%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNS--VSCVAR-FLGRFSFQPFKENPLLGPSSVTL 115
TW++P V+AN+AMFV+ MY NNCP N CV R FL R SFQP +ENP+LGPS+ TL
Sbjct: 59 TWVVPLVVIANVAMFVVVMYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATL 118
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
+K GALD VV +Q WRL T WLH G+ H+ ANM+SLL+IGIRLEQ+FGF +VGL+Y
Sbjct: 119 RKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVY 178
Query: 176 IISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
++SGFGGS+LS LFI N I+VGASGALFGLLG+MLSELITNWTIY+N+ + L++I
Sbjct: 179 LVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNLIIIA 238
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY 292
AINLA+GILP VDNFAHIGGF +GFLLGFV LI+PQFGW EQ + ++ K+ +
Sbjct: 239 AINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ-------VSSAKSKYNAF 291
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
Q IL +S+ L+I G GLV + +GVD N HCSWCHYL+CVPTS W C
Sbjct: 292 QIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 340
>gi|116310009|emb|CAH67035.1| OSIGBa0139P06.8 [Oryza sativa Indica Group]
gi|218195395|gb|EEC77822.1| hypothetical protein OsI_17028 [Oryza sativa Indica Group]
Length = 342
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 219/289 (75%), Gaps = 13/289 (4%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNS--VSCVAR-FLGRFSFQPFKENPLLGPSSVTL 115
TW++P V+AN+AMFV+ MY NNCP N CV R FL R SFQP +ENP+LGPS+ TL
Sbjct: 59 TWVVPLVVIANVAMFVVVMYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATL 118
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
+K GALD VV +Q WRL T WLH G+ H+ ANM+SLL+IGIRLEQ+FGF +VGL+Y
Sbjct: 119 RKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLLIGIRLEQQFGFWKVGLVY 178
Query: 176 IISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
++SGFGGS+LS LFI N I+VGASGALFGLLG+MLSELITNWTIY+N+ + L++I
Sbjct: 179 LVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNLIIIA 238
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY 292
AINLA+GILP VDNFAHIGGF +GFLLGFV LI+PQFGW EQ + ++ K+ +
Sbjct: 239 AINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ-------VSSAKSKYNAF 291
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
Q IL +S+ L+I G GLV + +GVD N HCSWCHYL+CVPTS W C
Sbjct: 292 QIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 340
>gi|226504776|ref|NP_001142335.1| membrane protein [Zea mays]
gi|194708266|gb|ACF88217.1| unknown [Zea mays]
gi|224034285|gb|ACN36218.1| unknown [Zea mays]
gi|414886370|tpg|DAA62384.1| TPA: membrane protein [Zea mays]
Length = 324
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/297 (63%), Positives = 231/297 (77%), Gaps = 9/297 (3%)
Query: 53 HSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV---SCVARFLGRFSFQPFKENPLLG 109
+KW WL+P +VA IA+FV+ MY NNCPK+ CVA FL RFSFQP +ENPLLG
Sbjct: 31 EERKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGDCVAGFLRRFSFQPLRENPLLG 90
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PSS TL+KMGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF+
Sbjct: 91 PSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFV 150
Query: 170 RVGLLYIISGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
R+G +Y++SGFGGS+LSALF++ S ISVGASGALFGLLGSMLSEL+ NWTIY+NK +
Sbjct: 151 RIGAIYLLSGFGGSVLSALFLRNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAII 210
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
TL+ IIA+NLA+GILPHVDNFAHIGGF +GFLLGFV L RPQF W+E
Sbjct: 211 TLLFIIALNLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWMESHELPHTNQP--- 267
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ ILW+V+LVL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 268 PKYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 324
>gi|242049912|ref|XP_002462700.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
gi|241926077|gb|EER99221.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
Length = 325
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 189/297 (63%), Positives = 235/297 (79%), Gaps = 9/297 (3%)
Query: 53 HSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS---CVARFLGRFSFQPFKENPLLG 109
+KW WL+P +VA IA+FV+ MY NNCPKN CVA FL RFSFQP +ENPLLG
Sbjct: 32 EDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGCVAGFLRRFSFQPLRENPLLG 91
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PSS TL+KMGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF+
Sbjct: 92 PSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFV 151
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
R+G +Y++SGFGGS+LSALF+++N ISVGASGALFGLLGSMLSEL+ NWTIY+NK +
Sbjct: 152 RIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAII 211
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
TL+ I+A+NLA+GILPH DNFAHIGGF +GFLLGFV L RPQF W+E R+ L +
Sbjct: 212 TLLFIVALNLAIGILPHADNFAHIGGFATGFLLGFVLLARPQFSWME-RHELPQTN--QP 268
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
K+ YQ ILW+V+LVL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 269 PKYKAYQYILWVVALVLLLVGFVVSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 325
>gi|226532718|ref|NP_001149879.1| membrane protein [Zea mays]
gi|194700888|gb|ACF84528.1| unknown [Zea mays]
gi|195635233|gb|ACG37085.1| membrane protein [Zea mays]
gi|414864370|tpg|DAA42927.1| TPA: membrane protein [Zea mays]
Length = 322
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 173/301 (57%), Positives = 234/301 (77%), Gaps = 4/301 (1%)
Query: 44 PPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCP-KNSVSCVARFLGRFSFQPF 102
P +Y + + ++WV WL+P VA+I +FV+TMY NNCP +++ CVARFLGRFSFQP
Sbjct: 21 PSPLYPQHEGEREWVPWLVPVIFVASITVFVVTMYANNCPARDTNKCVARFLGRFSFQPL 80
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
++NPL GPSS TL KMGAL KVV +HQGWRL++ WLH GV H++ANML LL IG+RL
Sbjct: 81 RQNPLFGPSSATLTKMGALVWEKVVHRHQGWRLLSSMWLHAGVIHLVANMLCLLFIGMRL 140
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN 222
EQ+FG++R+G +Y++SG GG++LS+L +++ ++VGASGAL GLLG+MLSEL+TNWTIYTN
Sbjct: 141 EQQFGYVRIGAIYVLSGVGGAVLSSLVVRNRVTVGASGALLGLLGAMLSELLTNWTIYTN 200
Query: 223 K--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG 280
K TL+ + A+NL +G+LPHVDN AH+GGF++GFLLGFV L+RP GW+E RY L
Sbjct: 201 KAAAVATLLSVAAVNLVLGVLPHVDNLAHLGGFLAGFLLGFVVLMRPHLGWME-RYGLPA 259
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWS 340
+ + RK++ YQ L V++++++VG G+ ML RG +AND C WCHYLSCVPT+RW+
Sbjct: 260 GAPCTARKYLAYQWTLLAVAIIILLVGFAAGMAMLFRGANANDSCHWCHYLSCVPTARWN 319
Query: 341 C 341
C
Sbjct: 320 C 320
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/262 (64%), Positives = 206/262 (78%), Gaps = 4/262 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPK-NSVSCVARFLGRFSFQPFKENPLLGPSSV 113
++W W++ ++ + +F+++MYVN+CP+ NS C A FLGRF+FQP KENPLLGPSS
Sbjct: 36 RRWTPWIVAAIALSCVVVFLVSMYVNDCPRRNSGDCAAGFLGRFAFQPLKENPLLGPSSA 95
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL KMGALDV+KVV HQGWRLITC WLH GV H+L NML LL IGIRLEQEFGF+R+GL
Sbjct: 96 TLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRIGL 155
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+Y+ISG GGSL+SALFI+S+ISVGASGALFGL+GSMLSELITNW++Y NK LTLV +
Sbjct: 156 VYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFV 215
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFM 290
I +NLA+GILP VDNFAHIGG ISGFLLGFV IRPQF W+ QR G A +RK
Sbjct: 216 IVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRKHK 275
Query: 291 TYQCILWIVSLVLVIVGLTLGL 312
TYQ ILW+ + +++IVG +
Sbjct: 276 TYQYILWLAAAIMLIVGHRRAM 297
>gi|242079729|ref|XP_002444633.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
gi|241940983|gb|EES14128.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
Length = 332
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/308 (61%), Positives = 234/308 (75%), Gaps = 23/308 (7%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS--------CVAR-FLGRFSFQPF 102
+ ++W WL+P +VA IA+F M+VN+CP++ + CVA L RFSFQP
Sbjct: 32 EEERRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSALGGGAGSGCVAAGLLRRFSFQPL 91
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
+ENPL GPSS TL+KMGAL+ +KVV +HQGWRLI+C WLH G+ H++ NMLSLL IGIRL
Sbjct: 92 RENPLFGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRL 151
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT 221
EQ+FGF+R+G++Y+ISGFGGS+LSALF+ SN ISVGASGALFGLLGSMLSELI NWTIY+
Sbjct: 152 EQQFGFVRIGVIYLISGFGGSVLSALFLHSNYISVGASGALFGLLGSMLSELIMNWTIYS 211
Query: 222 NK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
NK +TL+ IIAINLA+GILPH DNFAHIGGF SGFLLGFV L RPQFGW+E+
Sbjct: 212 NKAAAIITLLFIIAINLAIGILPHADNFAHIGGFASGFLLGFVLLARPQFGWMER----- 266
Query: 280 GYSALSRR----KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
S L + K+ YQ +LW+ +L+L++VG + LVML +G + ND C WCHYL+CVP
Sbjct: 267 --SELPQTNQPPKYKLYQYVLWVAALLLLVVGFVIILVMLFKGKNGNDSCHWCHYLNCVP 324
Query: 336 TSRWSCRT 343
TSRW C T
Sbjct: 325 TSRWKCDT 332
>gi|413925083|gb|AFW65015.1| hypothetical protein ZEAMMB73_264327 [Zea mays]
Length = 322
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/318 (58%), Positives = 233/318 (73%), Gaps = 13/318 (4%)
Query: 36 RPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR--- 92
+ G P + G ++W WL+P +VA IA+F M+VN+CP++ +
Sbjct: 8 KAAGYYQYPTSYAGAADEERRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSTLGGGAGC 67
Query: 93 ----FLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
L RFSFQP +ENPL GPSS TL+KMGAL+ +KVV +HQGWRLI+C WLH G+ H+
Sbjct: 68 VAAGLLRRFSFQPLRENPLFGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGLVHL 127
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLG 207
+ NMLSLL IGIRLEQ+FGF+R+G++Y+ISGFGGS+LSALF+ SN +SVGASGALFGLLG
Sbjct: 128 VVNMLSLLFIGIRLEQQFGFVRIGVIYLISGFGGSVLSALFLHSNYVSVGASGALFGLLG 187
Query: 208 SMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLI 265
SMLSELI NWTIY+NK +TL+ II INLA+GILPH DNFAHIGGF SGFL+GFV L
Sbjct: 188 SMLSELIINWTIYSNKAAAIITLLFIIVINLAIGILPHADNFAHIGGFASGFLIGFVLLA 247
Query: 266 RPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHC 325
RPQFGW+E R L S K+ +YQ +LW+ +L+L++VG + LVML G + ND C
Sbjct: 248 RPQFGWME-RSELPQTS--QPPKYKSYQYVLWVAALLLLVVGFAIILVMLFTGKNGNDSC 304
Query: 326 SWCHYLSCVPTSRWSCRT 343
WCHYL+CVPTSRW C T
Sbjct: 305 HWCHYLNCVPTSRWKCDT 322
>gi|15240744|ref|NP_196342.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|7546703|emb|CAB87281.1| membrane protein [Arabidopsis thaliana]
gi|16648762|gb|AAL25572.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|20466143|gb|AAM19993.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|332003744|gb|AED91127.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 346
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 254/350 (72%), Gaps = 16/350 (4%)
Query: 1 MAARESPPGIQIKVNSKG-GGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVT 59
MA + ++ +G G G N + P P V+ +G+ S +W +
Sbjct: 1 MAVGDDDLENRMSAKDRGIGSRGGDRNRIGPP-----PLPVALSSSTEFGDNALSSRWTS 55
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVS------CVARFLGRFSFQPFKENPLLGPSSV 113
WL+P FVVAN+A+FV+ M+VNNCP + S CVA+FLGR SF+P + NPL GPSS
Sbjct: 56 WLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSH 115
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL+K+GAL+ SKVV+K +GWRL+TC WLH GV H+ ANMLSL+ IGIRLEQ+FGF+R+G+
Sbjct: 116 TLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGV 175
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+Y++SG GGS+LS+LFI+++ISVGASGALFGLLGSMLSEL TNWTIY+NK LTL+ +
Sbjct: 176 IYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFV 235
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMT 291
I INLA+GILPHVDNFAH+GGF++GFLLGF+ L RPQF W+ + + G R K+ T
Sbjct: 236 ILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPL--RYKYKT 293
Query: 292 YQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ +LW++SLVL+I G + L+ML RG + NDHC WCHYL CVPTS W C
Sbjct: 294 YQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRC 343
>gi|326488163|dbj|BAJ89920.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499095|dbj|BAK06038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 230/306 (75%), Gaps = 14/306 (4%)
Query: 45 PAVYG-EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-----SVSCVAR-FLGRF 97
P YG E + ++ TWL+P V+AN+AMF++ MY N+CP+N + CV R L RF
Sbjct: 40 PFYYGQEAERERQHHTWLVPLVVLANVAMFIVVMYYNDCPRNGRGGAAADCVGRGVLRRF 99
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
SFQP KENPL GPSS TL K G LD KVV ++ WRL T WLH G+ H+ ANM+SL+
Sbjct: 100 SFQPLKENPLFGPSSATLGKYGGLDRYKVVHGNEAWRLETSTWLHAGLIHLGANMISLIF 159
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
+G+RLEQ+FGF +VGL+Y+ SG GGS+LS LFI++ +SVGASGALFGLLG+MLSELITNW
Sbjct: 160 VGVRLEQQFGFWKVGLVYLFSGLGGSVLSVLFIRNGVSVGASGALFGLLGAMLSELITNW 219
Query: 218 TIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
TIYTN+ L++I AINLA+GILPHVDNFAHIGGF++GFLLGFV LI+P+FGW+EQ
Sbjct: 220 TIYTNRLAAMANLIIIAAINLALGILPHVDNFAHIGGFLTGFLLGFVLLIQPRFGWLEQP 279
Query: 276 YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+ ++ K+ Q +L +++L+L I GL +GL+M+ RGV+ NDHCSWCHY++CVP
Sbjct: 280 FG-----GKTKSKYTACQIVLLVLALLLAIAGLAVGLLMVFRGVNGNDHCSWCHYITCVP 334
Query: 336 TSRWSC 341
TS W C
Sbjct: 335 TSHWKC 340
>gi|357148757|ref|XP_003574883.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 321
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 234/306 (76%), Gaps = 13/306 (4%)
Query: 48 YGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-------SVSCVARFLGRFSFQ 100
YG ++ ++W WL+P + A + +F + MY N+CP++ CVA FL RF+FQ
Sbjct: 19 YGVVREERQWWPWLVPAVLGACVTVFAVEMYNNDCPRHGSTLGGGDAPCVAGFLRRFAFQ 78
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
P +ENPLLGPSS TL+K+GALD +KVV +HQGWRLI+C WLH G+ H++ NMLSLL IGI
Sbjct: 79 PLRENPLLGPSSATLEKLGALDWAKVVHQHQGWRLISCIWLHAGLIHLIVNMLSLLFIGI 138
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTI 219
RLEQ+FGF+R+G++Y++SGFGGS+LSALF++++ ISVGASGALFGLLGSMLSELI NWTI
Sbjct: 139 RLEQQFGFVRIGIIYLLSGFGGSVLSALFLRNHYISVGASGALFGLLGSMLSELIMNWTI 198
Query: 220 YTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYA 277
Y+NK +TL+ II INLA+GILPH DNFAHIGGF+SGFL+GFV L RPQFGW+E R
Sbjct: 199 YSNKAAAIITLLFIIVINLAIGILPHADNFAHIGGFVSGFLIGFVLLARPQFGWME-RNE 257
Query: 278 LSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
L K+ TYQ +LW V+L+L++VG + L +L +G + ND C WC YL+CVPTS
Sbjct: 258 LP--QTDQPPKYKTYQYVLWGVALLLLLVGYVVTLALLFKGKNGNDGCHWCRYLNCVPTS 315
Query: 338 RWSCRT 343
RW C T
Sbjct: 316 RWKCGT 321
>gi|22122915|gb|AAM92298.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/315 (54%), Positives = 232/315 (73%), Gaps = 9/315 (2%)
Query: 32 EEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV---S 88
E + + S A Y + + ++WV WL+P +VAN+ +F + MYVNNCP ++ +
Sbjct: 17 REGEEERCGSPAAVAQYPQREGEREWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGA 76
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
CV +E P + KMGAL KVV +HQGWRL+TC WLH GV H+
Sbjct: 77 CVRIPPPLLLPASLREP---APRPLLRHKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHL 133
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS 208
LANMLSL++IG+RLEQ+FG++R+G++Y++SG GGS+LS+LFI+++ISVGASGALFGLLG+
Sbjct: 134 LANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGA 193
Query: 209 MLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
MLSEL TNWTIYTNK +TL+++IAINLA+GILPHVDNFAHIGGF++GFLLGF+FL+R
Sbjct: 194 MLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMR 253
Query: 267 PQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCS 326
P +GW+ QRY L + +K++ YQ IL V+ VL ++G +GL ML RGV+AN+ C
Sbjct: 254 PHYGWM-QRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCH 312
Query: 327 WCHYLSCVPTSRWSC 341
WCHYLSC+PTSRW+C
Sbjct: 313 WCHYLSCIPTSRWTC 327
>gi|357444041|ref|XP_003592298.1| Rhomboid family member [Medicago truncatula]
gi|355481346|gb|AES62549.1| Rhomboid family member [Medicago truncatula]
Length = 314
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/299 (58%), Positives = 225/299 (75%), Gaps = 20/299 (6%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCP-------KNSVSCVARFLGRFSFQPFKENPL 107
++ +WL+P FV NI +F++ M +NNCP K+ CVARFL RFSFQPF+ENPL
Sbjct: 26 RESCSWLVPAFVFVNIVVFIVVMGINNCPNTTFGFHKHHHHCVARFLHRFSFQPFRENPL 85
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
LGPSS+TL KMGAL VV +HQ WRL TC WLH G+ H+L+NML L++IGIRLEQ+FG
Sbjct: 86 LGPSSLTLIKMGALRWVNVVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFG 145
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF 225
F+++GL+Y++SGFGGS+ S++FI+++ISVGAS ALFGLLG+M+SEL+TNWTIY+NK
Sbjct: 146 FVKIGLIYLLSGFGGSVFSSIFIRNSISVGASSALFGLLGAMISELLTNWTIYSNKVMAL 205
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
LTL+V+IAINL +G+LP VDN AHIGG + GFLLGF+ L RPQ+ V L
Sbjct: 206 LTLLVMIAINLTIGLLPRVDNLAHIGGLVVGFLLGFILLPRPQYDGV-----------LR 254
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ K+ YQ +L IVSLVL+ GL+ GLVML RG + DHC WCHYL+CVP+SRW C +
Sbjct: 255 KSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFRGENGYDHCHWCHYLTCVPSSRWECNSN 313
>gi|242056443|ref|XP_002457367.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
gi|241929342|gb|EES02487.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
Length = 338
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/272 (61%), Positives = 212/272 (77%), Gaps = 21/272 (7%)
Query: 57 WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSC------------------VARFLGRFS 98
W +L+P F++AN+ +FV+TMYVN+CP ++ + +A LGRF+
Sbjct: 67 WFPFLVPLFILANVVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCLLAPELGRFA 126
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
FQ FKENPL+GP+S TL +MGAL+ SKV H+GWRLITC WLH GV HILANMLSLL+I
Sbjct: 127 FQSFKENPLIGPTSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVIHILANMLSLLMI 186
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
GIRLE+EFGFIR+G LY+ISG GGSLLS+LF+ SNISVGASGALFGLLGSMLSELITNWT
Sbjct: 187 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSMLSELITNWT 246
Query: 219 IYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
IY NK LTLV+II INLAVGILPHVDNFAH+GGF+SGF LGFV LIRPQFG++ Q+
Sbjct: 247 IYENKFAALLTLVMIIVINLAVGILPHVDNFAHLGGFMSGFCLGFVLLIRPQFGYINQKN 306
Query: 277 ALSGYSA-LSRRKFMTYQCILWIVSLVLVIVG 307
+ G+ A ++++KF YQ +L +++ ++++ G
Sbjct: 307 SPLGFPAGVTKQKFKIYQIVLLVIATMMIVSG 338
>gi|356575935|ref|XP_003556091.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/334 (52%), Positives = 216/334 (64%), Gaps = 63/334 (18%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPA-VYGEIKHSKKWVTWLIPCFVVANIAMFV 74
GGGG+ + T + SAP + VY H W +WL+P FVVANIA+FV
Sbjct: 6 ESGGGGTKNNRTAE--------ENYSAPESSHVYDSETH---WTSWLVPMFVVANIAVFV 54
Query: 75 ITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKH 130
ITMY+NNCP+N++ CVARFLGRFSFQP +ENPLLGPSS TL KMGAL VV++H
Sbjct: 55 ITMYINNCPRNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRH 114
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
QGWRL TC WLH GV H+LANMLSL+ IGIRLEQ+FGFI++G++Y++SGFGGS+LS+LFI
Sbjct: 115 QGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFI 174
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHI 250
+ +ISVGASGALFGLLG+MLSELITNWTIY+NK
Sbjct: 175 RDHISVGASGALFGLLGAMLSELITNWTIYSNK--------------------------- 207
Query: 251 GGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTL 310
F W+EQR +G S K+ YQ +LWIVSL+L+I GL+
Sbjct: 208 ------------------FSWLEQRRLPAGVGMKS--KYKAYQYVLWIVSLILLIAGLST 247
Query: 311 GLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
LVML RG DHC WC YL+CVPTS+W C +
Sbjct: 248 ALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSND 281
>gi|414867424|tpg|DAA45981.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 254
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/237 (65%), Positives = 197/237 (83%), Gaps = 3/237 (1%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
LQK+GAL KVV +HQGWRL+TC WLH GV H+LANM+SL++IG+RLEQ+FG++RVG++
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
Y++SG GGS+LS+LFI++NISVGASGALFGLLG+MLSEL TNWTIY NK +TL+V+I
Sbjct: 79 YLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVI 138
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY 292
AINLA+GILPHVDNFAHIGGF++GFLLGFV L+RP +GW+ QRYAL + +K++ Y
Sbjct: 139 AINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRYALPSDVKYTTKKYLAY 197
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS 349
Q L V+ VL ++G +GL ML RGV+ANDHC WCHYLSCVPTSRWSC ++C+
Sbjct: 198 QWALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSCGNSQSYCT 254
>gi|242072091|ref|XP_002451322.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
gi|241937165|gb|EES10310.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
Length = 292
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 211/293 (72%), Gaps = 22/293 (7%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGALDV KVV QGWRLITC WLH GV H+L NML L++IGIRLEQEFGF+R+GL+Y+I
Sbjct: 1 MGALDVPKVVHGRQGWRLITCMWLHAGVVHLLINMLCLVIIGIRLEQEFGFVRIGLVYLI 60
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SGFGGSL+SALFIQSN+SVGASGALFGL+GSMLSELITNW++Y NK +TLV++I +N
Sbjct: 61 SGFGGSLMSALFIQSNVSVGASGALFGLIGSMLSELITNWSLYANKVAALVTLVLVIVVN 120
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS---------- 285
LA+G+LP VDNFAHIGG ISGFLLGFVF IRPQF W+ Q +S +
Sbjct: 121 LALGLLPRVDNFAHIGGLISGFLLGFVFFIRPQFAWLTQHRRVSAAAQPDGQPPAAAPTP 180
Query: 286 ------RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+RK TYQ +LW+ + VL++VG T+ V+L RG +AN+HC WCHYLSCVPT RW
Sbjct: 181 PPVVSVKRKHKTYQYVLWLAAAVLLVVGFTVATVLLFRGYNANEHCPWCHYLSCVPTKRW 240
Query: 340 SCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYIL---SNPSSSQIQSLCTELCS 389
C P C+ T N L V C + GK+ Y++ ++ S +I LC +LC+
Sbjct: 241 KCDASPTTCTGTLQENTLTVVC-AGGKNQTYVVASAADASQDRINDLCNQLCT 292
>gi|125575434|gb|EAZ16718.1| hypothetical protein OsJ_32194 [Oryza sativa Japonica Group]
Length = 253
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 194/229 (84%), Gaps = 3/229 (1%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
LQKMGAL KVV +HQGWRL+TC WLH GV H+LANMLSL++IG+RLEQ+FG++R+G++
Sbjct: 24 LQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGII 83
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
Y++SG GGS+LS+LFI+++ISVGASGALFGLLG+MLSEL TNWTIYTNK +TL+++I
Sbjct: 84 YLVSGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVI 143
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY 292
AINLA+GILPHVDNFAHIGGF++GFLLGF+FL+RP +GW+ QRY L + +K++ Y
Sbjct: 144 AINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPSSVKYTSKKYLAY 202
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
Q IL V+ VL ++G +GL ML RGV+AN+ C WCHYLSC+PTSRW+C
Sbjct: 203 QWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYLSCIPTSRWTC 251
>gi|255586755|ref|XP_002533997.1| KOM, putative [Ricinus communis]
gi|223526008|gb|EEF28386.1| KOM, putative [Ricinus communis]
Length = 229
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 200/223 (89%), Gaps = 3/223 (1%)
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
+++GLLY+ISGFGGSL+S+LFIQ+NISVGASGALFGLLG+MLSELITNWTIYTNK F+
Sbjct: 6 VKIGLLYVISGFGGSLMSSLFIQTNISVGASGALFGLLGAMLSELITNWTIYTNKVAAFV 65
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS- 285
TL++IIAINLAVGILPHVDNFAHIGGF+SGFLLGFVFLIRPQFGWV QRY GYS S
Sbjct: 66 TLLIIIAINLAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYVPPGYSPASV 125
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEP 345
+ KF YQ ILWI+SL++V+ GLTLGLV+LLRGVDANDHCSWCHYLSCVPTSRWSC TEP
Sbjct: 126 KPKFKAYQRILWIISLIVVVAGLTLGLVLLLRGVDANDHCSWCHYLSCVPTSRWSCNTEP 185
Query: 346 AFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
A C ++Q G+QLNVTC++NGKS++Y L + ++SQI+ LCT+LC
Sbjct: 186 ASCLSSQMGSQLNVTCTTNGKSSVYRLPDATNSQIEGLCTQLC 228
>gi|212722852|ref|NP_001132594.1| uncharacterized protein LOC100194066 [Zea mays]
gi|194694850|gb|ACF81509.1| unknown [Zea mays]
Length = 248
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/229 (67%), Positives = 193/229 (84%), Gaps = 3/229 (1%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
LQK+GAL KVV +HQGWRL+TC WLH GV H+LANM+SL++IG+RLEQ+FG++RVG++
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
Y++SG GGS+LS+LFI++NISVGASGALFGLLG+MLSEL TNWTIY NK +TL+V+I
Sbjct: 79 YLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVI 138
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY 292
AINLA+GILPHVDNFAHIGGF++GFLLGFV L+RP +GW+ QRYAL + +K++ Y
Sbjct: 139 AINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRYALPSDVKYTTKKYLAY 197
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
Q L V+ VL ++G +GL ML RGV+ANDHC WCHYLSCVPTSRWSC
Sbjct: 198 QWALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSC 246
>gi|297743435|emb|CBI36302.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 198/259 (76%), Gaps = 6/259 (2%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS--CVAR-FLGRFSFQPFKENPLLGPS 111
K W WL+P F +AN+A FV +MYVNNCP+ + + CV +LGRFSFQP ENPL GPS
Sbjct: 31 KSWFPWLVPVFFMANVATFVYSMYVNNCPEKTGADRCVFNSYLGRFSFQPLSENPLFGPS 90
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
TL+K+GAL+ VV + + WRL++C WLH G H++ANMLSLL IG++LEQEFGF+R+
Sbjct: 91 PTTLEKLGALEKKLVVQEGEEWRLVSCIWLHAGAIHLIANMLSLLFIGVKLEQEFGFLRI 150
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
GLLY+ISGFGGSLLSAL +Q +ISVGASGALFGLLG+MLSEL NWTIY NK +TL+
Sbjct: 151 GLLYVISGFGGSLLSALHLQKSISVGASGALFGLLGAMLSELFMNWTIYANKCAALMTLM 210
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS-RRK 288
++ +NLAVG LPHVD+ AHIGGF+SGFLLGF+ L+RPQ+G+V ++Y GY + K
Sbjct: 211 FVVVLNLAVGFLPHVDSSAHIGGFLSGFLLGFILLVRPQYGYVSRKYIPPGYDGKRVKSK 270
Query: 289 FMTYQCILWIVSLVLVIVG 307
YQ +LW+ +LV +I G
Sbjct: 271 HKWYQYLLWVAALVALIFG 289
>gi|110289433|gb|ABG66197.1| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
gi|215686404|dbj|BAG87689.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/226 (65%), Positives = 191/226 (84%), Gaps = 3/226 (1%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGAL KVV +HQGWRL+TC WLH GV H+LANMLSL++IG+RLEQ+FG++R+G++Y++
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SG GGS+LS+LFI+++ISVGASGALFGLLG+MLSEL TNWTIYTNK +TL+++IAIN
Sbjct: 61 SGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAIN 120
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
LA+GILPHVDNFAHIGGF++GFLLGF+FL+RP +GW+ QRY L + +K++ YQ I
Sbjct: 121 LAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWM-QRYVLPSSVKYTSKKYLAYQWI 179
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L V+ VL ++G +GL ML RGV+AN+ C WCHYLSC+PTSRW+C
Sbjct: 180 LLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYLSCIPTSRWTC 225
>gi|147777535|emb|CAN75940.1| hypothetical protein VITISV_040961 [Vitis vinifera]
Length = 292
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/302 (59%), Positives = 226/302 (74%), Gaps = 26/302 (8%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSK----KWVTWLIPCFVVANIA 71
+GGG GN HP P Y +++ W +WLIP FVVAN+A
Sbjct: 7 ERGGGMKNRGNNGHP--------------PGYYSSTYYAEASETHWTSWLIPMFVVANVA 52
Query: 72 MFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVV 127
+FV+ MYVN+CPK + +CVA+FL R SFQP +ENPL GPSS TL+K+G L+ +KVV
Sbjct: 53 VFVVVMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVV 112
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
QGWRL+TC WLH GV H+LANMLSL+ IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+
Sbjct: 113 YGDQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSS 172
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVD 245
LFIQ NISVGASGALFGLLG+MLSELITNW+IYTNK TLVVIIAINLAVGILPHVD
Sbjct: 173 LFIQHNISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVD 232
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
NFAHIGGF++GFLLGF+ L+RPQFGWV++++ + S+ K YQ + W+V++ L+I
Sbjct: 233 NFAHIGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARVQSKHK--VYQYVFWLVAMALLI 290
Query: 306 VG 307
VG
Sbjct: 291 VG 292
>gi|255635820|gb|ACU18258.1| unknown [Glycine max]
Length = 239
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/243 (65%), Positives = 190/243 (78%), Gaps = 18/243 (7%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPA-VYGEIKHSKKWVTWLIPCFVVANIAMFV 74
GGGG+ + T + SAP + VY H W +WL+P FVVANIA+FV
Sbjct: 6 ESGGGGTKNNRTAE--------ENYSAPESSHVYDSETH---WTSWLVPMFVVANIAVFV 54
Query: 75 ITMYVNNCPKNSVS----CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKH 130
ITMY+NNCP+N++ CVARFLGRFSFQP +ENPLLGPSS TL KMGAL VV++H
Sbjct: 55 ITMYINNCPRNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRH 114
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
QGWRL TC WLH GV H+LANMLSL+ IGIRLEQ+FGFI++G++Y++SGFGGS+LS+LFI
Sbjct: 115 QGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFI 174
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFA 248
+ +ISVGASGALFGLLG+MLSELITNWTIY+NK +TL+VII INL +GILPHVDNFA
Sbjct: 175 RDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFA 234
Query: 249 HIG 251
HIG
Sbjct: 235 HIG 237
>gi|297799698|ref|XP_002867733.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313569|gb|EFH43992.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/312 (53%), Positives = 218/312 (69%), Gaps = 7/312 (2%)
Query: 35 DRPQGVSAPPPAVYGEIKHSK----KWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCV 90
+ P+G P GE + +W +W+IP V+AN+ +F++ MY N+CP S C+
Sbjct: 8 EDPEGGRRRDPNNGGETTTATTPDLRWRSWIIPIVVIANVVVFIVVMYFNDCPHKSHHCL 67
Query: 91 ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
A+FLGRFSF+ FK NPLLGPSS TL+KMGAL K+V K Q WRL TC WLH GV H+LA
Sbjct: 68 AKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVWRLFTCMWLHAGVIHLLA 127
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML 210
NM + IG+RLEQ+FGF+RVG +Y++SGF GS+LS LF+Q+ ISVGAS ALFGLLG+ML
Sbjct: 128 NMCCVAFIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLQNAISVGASSALFGLLGAML 187
Query: 211 SELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
SEL+ NWT Y NK + L+VI+ +NL +G LP VDNFAHIGGF+ GFLLGF+ LI PQ
Sbjct: 188 SELLINWTTYDNKGVALVMLLVIVGVNLGLGTLPPVDNFAHIGGFLGGFLLGFLLLIHPQ 247
Query: 269 FGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWC 328
F W E R +L + + K+ T Q +L I++ ++ + G T GLV+L RG + N +C WC
Sbjct: 248 FEWEENRVSLMP-GTIVKPKYNTCQLVLCIIASIVFVAGFTSGLVILFRGDNLNRYCKWC 306
Query: 329 HYLSCVPTSRWS 340
H LS S+W+
Sbjct: 307 HKLSYSSKSQWT 318
>gi|356559855|ref|XP_003548212.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/305 (53%), Positives = 203/305 (66%), Gaps = 54/305 (17%)
Query: 41 SAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGR 96
+AP VY H W +WL+P FV N+ +FV+ MY+N+CP+ ++ CVARFLGR
Sbjct: 25 AAPTSYVYDPEVH---WTSWLVPLFVAVNVVVFVVAMYLNDCPRKNLGFEGECVARFLGR 81
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
FSFQP +ENPL GPSS TL KMGAL VV+ HQ WRL+TC WLH GV H+ ANMLSL+
Sbjct: 82 FSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIWLHAGVVHLAANMLSLV 141
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+LFI++NISVGASGALFGLLG+MLSELITN
Sbjct: 142 FIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITN 201
Query: 217 WTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
W+IYTNK FGW+EQR
Sbjct: 202 WSIYTNK---------------------------------------------FGWLEQRR 216
Query: 277 ALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPT 336
+G S K+ YQ +LWIVS +L+IVGL++ LVML RG + DHC WCHYL+CVPT
Sbjct: 217 PPAGVRLKS--KYKAYQYVLWIVSAILLIVGLSIALVMLFRGENGYDHCHWCHYLTCVPT 274
Query: 337 SRWSC 341
S+W C
Sbjct: 275 SKWKC 279
>gi|124359588|gb|ABD28718.2| Protein secE/sec61-gamma protein; Rhomboid-like protein [Medicago
truncatula]
Length = 324
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/290 (53%), Positives = 208/290 (71%), Gaps = 19/290 (6%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPK--NSVSCV-ARFLGRFSFQPFKENPLLGPSS 112
+W +WL+P F +ANIAMFV +MY+N+CP N C+ ++LG+FSFQPF ENPLLGPS
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSV 89
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
TL+ +GAL+ VV +++ WR ITC +LH GV H+LANM SLL IG+RLE EFGF+++G
Sbjct: 90 RTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIG 149
Query: 173 LLYIISGFGGSLLSALFI-----QSNISVGASGALFGLLGSMLSELITNWTIYTN----- 222
+LY++SGFGGSLLS L + + +SVGASGALFGLLG+MLSEL+TNWTIY N
Sbjct: 150 VLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKGEKP 209
Query: 223 -----KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYA 277
K +L++II +NLAVG +PHVDN AHIGGF+SGF LGFV L+RPQFG+V +Y
Sbjct: 210 LTVQFKALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYI 269
Query: 278 LSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSW 327
GY A + K+ YQ ++S++ +++G GL L G ++ND S+
Sbjct: 270 PPGYDAKRKSKYKGYQYFFLVLSVITLLIGYAYGLATLYIG-ESNDVFSY 318
>gi|359492423|ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
vinifera]
Length = 379
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/341 (46%), Positives = 224/341 (65%), Gaps = 6/341 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSV 113
K+ +W+I FVV +I F TM+VN+C +NS C + LGR SFQP ENPLLGPSS
Sbjct: 39 KREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKVLGRLSFQPLWENPLLGPSSS 98
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL +MGAL + + + HQ WRL TC WLH G H++ N+ S++ +GI LEQEFG +R+G+
Sbjct: 99 TLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGM 158
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+YI+S F GSL++ LF+Q + +VG+SGALFGLLGSMLS LI NW +YT+K L+++
Sbjct: 159 VYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLV 218
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF-GWVEQRYALSGYSALS--RRK 288
IN A+G+LP+VDNF+++GGFISG LLGFV L P+ E++ YS R K
Sbjct: 219 AVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEKKGGFFDYSVKKSIRLK 278
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
+ +L VS VL + L +V +L G+D N +CSWC Y++CVP++RWSC T+ C
Sbjct: 279 QKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNRWSCNTKVTAC 338
Query: 349 STTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
T ++ +L VTC ++ ++ S +++ LC +CS
Sbjct: 339 QTMENAGRLTVTCMGKDNFRVFPFTSFSETRLHDLCDLICS 379
>gi|356557245|ref|XP_003546928.1| PREDICTED: rhomboid-related protein 3-like [Glycine max]
Length = 324
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 210/302 (69%), Gaps = 19/302 (6%)
Query: 31 VEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCP---KNSV 87
+ +++ + +PPP + + W WL+P +A IAMFV TMY N+CP V
Sbjct: 8 LSDVEAARNPPSPPPTFH--VPLPSMWFPWLVPLIFLATIAMFVYTMYENDCPAYLDEEV 65
Query: 88 SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFH 147
+++LGRFSFQPF+ENPLLGP+ TL+ +GAL+ VVD+++ WR +C +LH GV H
Sbjct: 66 CLFSQYLGRFSFQPFRENPLLGPAIRTLRLLGALEKELVVDQNEVWRFFSCMFLHAGVVH 125
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN----ISVGASGALF 203
+LANM SLL IG+RLE+EFGF+++GLLY++SGFGGS+LS L ++ + +SVGASGALF
Sbjct: 126 LLANMFSLLFIGVRLEKEFGFLKIGLLYVLSGFGGSVLSVLHLKESEANTVSVGASGALF 185
Query: 204 GLLGSMLSELITNWTIYTNK----------HFLTLVVIIAINLAVGILPHVDNFAHIGGF 253
GLLG+MLSEL+TNW+IY NK +L++I+ +NLAVG LPHVDN AH+GGF
Sbjct: 186 GLLGAMLSELLTNWSIYANKVLYPCLLQCAALTSLLIIVGLNLAVGFLPHVDNSAHVGGF 245
Query: 254 ISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLV 313
++G+ LGFV L+RPQ+G+V ++Y GY + K+ YQ I+S++++++G GL
Sbjct: 246 LAGYFLGFVLLMRPQYGYVNRKYIPPGYDVKRKSKYKWYQYFFLIMSVIILLLGYAYGLA 305
Query: 314 ML 315
L
Sbjct: 306 KL 307
>gi|225455418|ref|XP_002279126.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 278
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/290 (54%), Positives = 201/290 (69%), Gaps = 51/290 (17%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPS 111
+W +WL+P FVVAN+A+FV+ MY+NNCPK + CVA FLGRFSFQP KENPL GPS
Sbjct: 31 QWTSWLVPMFVVANVAVFVVAMYINNCPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPS 90
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
S TL+K+GAL+ KVV KHQGWRL+TC WLH G+ H+L NMLSL++IGIRLEQ+FGF+R+
Sbjct: 91 SKTLEKLGALEWKKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRI 150
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVI 231
G++Y++SGFGGS+LS+LFIQ++ISVGASGALFGLLG+MLSELITNW++YTN+
Sbjct: 151 GVIYLLSGFGGSVLSSLFIQNSISVGASGALFGLLGAMLSELITNWSMYTNR-------- 202
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMT 291
FGW+E R + + K+
Sbjct: 203 -------------------------------------FGWIEGRNLPADVRV--KSKYKA 223
Query: 292 YQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
YQ + W+VSLVL+I G T+GLVML +G + ++HC WCHYLSCVPTS W C
Sbjct: 224 YQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSEHCHWCHYLSCVPTSSWKC 273
>gi|225426830|ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 281
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/330 (51%), Positives = 214/330 (64%), Gaps = 61/330 (18%)
Query: 16 SKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVI 75
+GGG GN HP P S+ Y E + W +WLIP FVVAN+A+FV+
Sbjct: 7 ERGGGMKNRGNNGHP------PGYYSS---TYYAEASETH-WTSWLIPMFVVANVAVFVV 56
Query: 76 TMYVNNCPKNSV----SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQ 131
MYVN+CPK + +CVA+FL R SFQP +ENPL GPSS TL+K+G L+ +KVV Q
Sbjct: 57 VMYVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQ 116
Query: 132 GWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ 191
GWRL+TC WLH GV H+LANMLSL+ IGIRLEQ+FGF+R+G++Y++SGFGGS+LS+LFIQ
Sbjct: 117 GWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQ 176
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIG 251
NISVGASGALFGLLG+MLSELITNW+IYTNK
Sbjct: 177 HNISVGASGALFGLLGAMLSELITNWSIYTNK---------------------------- 208
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
FGWV++++ + A + K YQ W+V++ L+IVG T+G
Sbjct: 209 -----------------FGWVKRQHRPA--DARVKSKHKVYQYAFWLVAMALLIVGFTVG 249
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
LVML RG + NDHCSWCHYLSCVPTS+W C
Sbjct: 250 LVMLFRGENGNDHCSWCHYLSCVPTSKWKC 279
>gi|168030936|ref|XP_001767978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680820|gb|EDQ67253.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/318 (53%), Positives = 219/318 (68%), Gaps = 14/318 (4%)
Query: 40 VSAPPPAVYGEI------KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN---SVSCV 90
VS PP Y +H + W + + VVANI + V+ MY NNCP N CV
Sbjct: 4 VSPPPDGSYSSYVATPAKRHKRCWPIFTLGA-VVANIIVLVVVMYENNCPANIGYGRKCV 62
Query: 91 -ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHIL 149
R SFQP+ ENPLLGPSS TLQKMG L VVD+ QGWRL++C WLH GVFH+L
Sbjct: 63 LGSSFKRMSFQPWSENPLLGPSSATLQKMGGLRTDLVVDQKQGWRLMSCVWLHAGVFHLL 122
Query: 150 ANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSM 209
NM++LLV GI LE++FGFIR+GLLY+ISG GGSLLS+LF + ISVGASGALFGLLG+
Sbjct: 123 VNMIALLVFGIELERDFGFIRIGLLYLISGLGGSLLSSLFNHNAISVGASGALFGLLGAT 182
Query: 210 LSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRP 267
SELITNW+ Y ++ L+++ +NLA+G+LP VDNFAHIGGF++GFLLGF+ L++
Sbjct: 183 TSELITNWSRYRSRCSQLFQLIIVTGVNLAIGLLPRVDNFAHIGGFVTGFLLGFILLMKE 242
Query: 268 QFGWVEQRYALS-GYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCS 326
Q+ +V++ L ++F TYQ IL +VSL+L+I G G V L GVDA + CS
Sbjct: 243 QYRYVQRSTLLDPRMDPQHVKRFKTYQFILLLVSLLLLIAGFAGGFVALYSGVDAYNRCS 302
Query: 327 WCHYLSCVPTSRWSCRTE 344
WCHYL+CVP+S W+C ++
Sbjct: 303 WCHYLNCVPSSHWTCDSQ 320
>gi|317106731|dbj|BAJ53227.1| JHL06P13.7 [Jatropha curcas]
Length = 311
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/273 (54%), Positives = 197/273 (72%), Gaps = 6/273 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPK--NSVSCV-ARFLGRFSFQPFKENPLL 108
+ ++W WL+P AN+ MF+ TMY N+CP + C+ +LGR+SFQPFKEN +L
Sbjct: 28 QKQEQWTPWLVPLIFAANVTMFIYTMYDNDCPTYTGTDKCLFYEYLGRYSFQPFKENAVL 87
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPS +TL+ +GALD +V + WR +C WLH GV H+L NM+SLL IGI LEQEFGF
Sbjct: 88 GPSVITLELLGALDPLRVERNGEAWRFFSCIWLHAGVLHLLTNMISLLFIGIPLEQEFGF 147
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFL 226
+R+GLLY++SGFGGSL+SAL + NISVGASGALFGLLGSMLSEL NWT Y N K
Sbjct: 148 LRIGLLYVMSGFGGSLMSALSPEPNISVGASGALFGLLGSMLSELFLNWTTYVNKCKAVT 207
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
+L++II +NL+ G++PHVDN AHIGGF+SGFLLGF+ L+RPQ+G+V +RY +GY + +
Sbjct: 208 SLLLIIGLNLSFGLIPHVDNSAHIGGFLSGFLLGFILLMRPQYGYVSRRYIPAGYDMIKK 267
Query: 287 R-KFMTYQCILWIVSLVLVIVGLTLGLVMLLRG 318
+ K YQ +L+I++ V +I GL M G
Sbjct: 268 KPKHKCYQYLLFIIASVALIFWYLWGLDMFYNG 300
>gi|357455203|ref|XP_003597882.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
gi|355486930|gb|AES68133.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
Length = 345
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/311 (50%), Positives = 208/311 (66%), Gaps = 40/311 (12%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPK--NSVSCV-ARFLGRFSFQPFKENPLLGPSS 112
+W +WL+P F +ANIAMFV +MY+N+CP N C+ ++LG+FSFQPF ENPLLGPS
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSV 89
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
TL+ +GAL+ VV +++ WR ITC +LH GV H+LANM SLL IG+RLE EFGF+++G
Sbjct: 90 RTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIG 149
Query: 173 LLYIISGFGGSLLSALFI-----QSNISVGASGALFGLLGSMLSELITNWTIYTNK---- 223
+LY++SGFGGSLLS L + + +SVGASGALFGLLG+MLSEL+TNWTIY NK
Sbjct: 150 VLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKVLYN 209
Query: 224 ---------------------------HFLTLVVIIAINLAVGILPHVDNFAHIGGFISG 256
+L++II +NLAVG +PHVDN AHIGGF+SG
Sbjct: 210 DIFCCLERKREKIHGVGVCAKGQCSCAALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSG 269
Query: 257 FLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLL 316
F LGFV L+RPQFG+V +Y GY A + K+ YQ ++S++ +++G GL L
Sbjct: 270 FFLGFVILMRPQFGYVNNKYIPPGYDAKRKSKYKGYQYFFLVLSVITLLIGYAYGLATLY 329
Query: 317 RGVDANDHCSW 327
G ++ND S+
Sbjct: 330 IG-ESNDVFSY 339
>gi|297847644|ref|XP_002891703.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337545|gb|EFH67962.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 197/289 (68%), Gaps = 9/289 (3%)
Query: 37 PQGVSAPPPAVYGEIKHS--KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVA-RF 93
P PPP + + WV WL+P + AN F TMYVN+CP S C+
Sbjct: 9 PDIEHGPPPPARPQFRPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARSDECLLFDV 68
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
LGR SFQP KEN LLGPS TL+K+GAL+ ++V++ + WRLI+C WLHGG H++ANM+
Sbjct: 69 LGRLSFQPIKENMLLGPSIPTLRKLGALE-RRLVEEGERWRLISCIWLHGGFLHLMANMI 127
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ--SNISVGASGALFGLLGSMLS 211
SL+ IG+RLEQEFGF+R+G LY+ISG GGSL+S L +SVGASGALFGLLG+MLS
Sbjct: 128 SLMCIGMRLEQEFGFMRIGALYVISGLGGSLMSCLTDSQGERVSVGASGALFGLLGAMLS 187
Query: 212 ELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
ELITNWTIY NK +TLV+II +NL+VG LP VDN AH GGF++GF LGFV L+RPQ+
Sbjct: 188 ELITNWTIYENKCTALMTLVLIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQY 247
Query: 270 GWVEQRYALSGYSALSRR-KFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
G+V +Y GY ++ K YQ IL SL +++VG G LLR
Sbjct: 248 GYVSPKYIPPGYDMKHKKSKHKCYQHILMYTSLAVLLVGFIAGYTKLLR 296
>gi|15219034|ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
gi|5903047|gb|AAD55606.1|AC008016_16 F6D8.20 [Arabidopsis thaliana]
gi|332194705|gb|AEE32826.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
Length = 309
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/289 (52%), Positives = 195/289 (67%), Gaps = 9/289 (3%)
Query: 37 PQGVSAPPPAVYGEIKHS--KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVA-RF 93
P + PPP + WV WL+P + AN F TMYVN+CP S C+
Sbjct: 9 PDIENGPPPPARPHFRPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARSDECLLFDV 68
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
LGR SFQP KEN LLGPS TL+K+GAL+ ++V++ + WRLI+C WLHGG H++ANM+
Sbjct: 69 LGRLSFQPIKENMLLGPSIPTLRKLGALE-RRLVEEGERWRLISCIWLHGGFLHLMANMI 127
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ--SNISVGASGALFGLLGSMLS 211
SL+ IG+RLEQEFGF+R+G LY+ISG GGSL+S L +SVGASGALFGLLG+MLS
Sbjct: 128 SLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLTDSQGERVSVGASGALFGLLGAMLS 187
Query: 212 ELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
ELITNWTIY NK +TL++II +NL+VG LP VDN AH GGF++GF LGFV L+RPQ+
Sbjct: 188 ELITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQY 247
Query: 270 GWVEQRYALSGYSALSRR-KFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
G+V +Y GY ++ K YQ I SL +++ G G LLR
Sbjct: 248 GYVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFIAGYTKLLR 296
>gi|222629393|gb|EEE61525.1| hypothetical protein OsJ_15827 [Oryza sativa Japonica Group]
Length = 301
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 10/235 (4%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P S L+K GALD VV +Q WRL T WLH G+ H+ ANM+SLL+IGIRLEQ+FGF
Sbjct: 72 PCSWWLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFW 131
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
+VGL+Y++SGFGGS+LS LFI N I+VGASGALFGLLG+MLSELITNWTIY+N+ +
Sbjct: 132 KVGLVYLVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMV 191
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
L++I AINLA+GILP VDNFAHIGGF +GFLLGFV LI+PQFGW EQ + ++
Sbjct: 192 NLIIIAAINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQVSS-------AK 244
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
K+ +Q IL +S+ L+I G GLV + +GVD N HCSWCHYL+CVPTS W C
Sbjct: 245 SKYNAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 299
>gi|356518507|ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 373
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 212/338 (62%), Gaps = 8/338 (2%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
TW++ FV+ I +F+ TM VN+C NS CV + LGRFSFQP ENPLLGPS L +
Sbjct: 36 TWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQALGRFSFQPLPENPLLGPSQSKLDE 95
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGAL S + + HQ WRL T +LH GVFH+L N+ S++ +G+ LE FG IR+G++Y +
Sbjct: 96 MGALRRSLLTEHHQTWRLFTFPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGIIYAL 155
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
S F GSL+++LF+Q+ +VGASGAL+GLLG++LSEL+ NW ++NK +LV + N
Sbjct: 156 SAFVGSLVASLFLQNMPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCN 215
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE-QRYALSGYSALSRRKFMTYQC 294
+G LP+VDNFA IGGFISGFLLG VFL+ PQ V + L Y S K Q
Sbjct: 216 FVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKGGLIDYGVKSCIKLKLKQK 275
Query: 295 ----ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCST 350
+L IVSL+L + L LV +L G++ N +C+WC Y+ C+P + W C+ C T
Sbjct: 276 LDRPVLRIVSLILFSLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKDTETSCET 335
Query: 351 TQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
QL +TC NG ++ +N S ++ LC +C
Sbjct: 336 MVSNAQLTMTCIGNGNFRVFPFTNISRARFNDLCNLIC 373
>gi|15236387|ref|NP_194038.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
gi|3292833|emb|CAA19823.1| putative membrane protein [Arabidopsis thaliana]
gi|7269154|emb|CAB79262.1| putative membrane protein [Arabidopsis thaliana]
gi|332659302|gb|AEE84702.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
Length = 313
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 210/294 (71%), Gaps = 3/294 (1%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
GE +W +W+IP V+AN+ +FV+ MY N+CP S C+A+FLGRFSF+ FK NPLL
Sbjct: 21 GETTPDMQWRSWIIPIVVIANVVVFVVVMYYNDCPHKSHRCLAKFLGRFSFESFKSNPLL 80
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPSS TL+KMGAL K+V K Q WRL+TC WLH GV H+LANM + IG+RLEQ+FGF
Sbjct: 81 GPSSSTLEKMGALAWGKIVHKRQVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGF 140
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
+RVG +Y++SGF GS+LS LF++ ISVGAS ALFGLLG+MLSEL+ NWT Y NK +
Sbjct: 141 VRVGTIYLVSGFCGSILSCLFLEDAISVGASSALFGLLGAMLSELLINWTTYDNKGVAIV 200
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
L+VI+ +NL +G LP VDNFAHIGGF GFLLGF+ LI PQF W E + +L + +
Sbjct: 201 MLLVIVGVNLGLGTLPPVDNFAHIGGFFGGFLLGFLLLIHPQFEWEENQVSLMP-GTIVK 259
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWS 340
K+ T Q +L IV+ ++ + G T GLV+L RG N +C WCH LS S+W+
Sbjct: 260 PKYNTCQLVLCIVASIVFVAGFTSGLVILFRGDSLNRYCKWCHKLSYSSKSQWT 313
>gi|84468346|dbj|BAE71256.1| hypothetical protein [Trifolium pratense]
Length = 184
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/184 (71%), Positives = 157/184 (85%), Gaps = 3/184 (1%)
Query: 209 MLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
MLSELITNW++Y NK LTLV+II +NLA+GILPHVDNFAHIGGF++GFLLGFVFLIR
Sbjct: 1 MLSELITNWSMYDNKIAALLTLVIIIGVNLAIGILPHVDNFAHIGGFLTGFLLGFVFLIR 60
Query: 267 PQFGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHC 325
PQFGW+ QRYA YS ++ KF YQCILW++SL+++IVGL++GL LLRGVDAN HC
Sbjct: 61 PQFGWINQRYARVEYSPTRAKPKFKKYQCILWVLSLIILIVGLSVGLDALLRGVDANKHC 120
Query: 326 SWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCT 385
SWCHYLSCVPTS+WSC TEPA+C + Q GNQLNVTCSSNGKS Y++ +PSSSQIQ LCT
Sbjct: 121 SWCHYLSCVPTSKWSCHTEPAYCLSNQLGNQLNVTCSSNGKSTTYLMQDPSSSQIQQLCT 180
Query: 386 ELCS 389
+LC+
Sbjct: 181 QLCN 184
>gi|302141893|emb|CBI19096.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/301 (49%), Positives = 203/301 (67%), Gaps = 6/301 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSV 113
K+ +W+I FVV +I F TM+VN+C +NS C + LGR SFQP ENPLLGPSS
Sbjct: 39 KREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKVLGRLSFQPLWENPLLGPSSS 98
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL +MGAL + + + HQ WRL TC WLH G H++ N+ S++ +GI LEQEFG +R+G+
Sbjct: 99 TLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGM 158
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
+YI+S F GSL++ LF+Q + +VG+SGALFGLLGSMLS LI NW +YT+K L+++
Sbjct: 159 VYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLV 218
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF-GWVEQRYALSGYSALS--RRK 288
IN A+G+LP+VDNF+++GGFISG LLGFV L P+ E++ YS R K
Sbjct: 219 AVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEKKGGFFDYSVKKSIRLK 278
Query: 289 FMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
+ +L VS VL + L +V +L G+D N +CSWC Y++CVP++RWSC T+ C
Sbjct: 279 QKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNRWSCNTKVTAC 338
Query: 349 S 349
Sbjct: 339 Q 339
>gi|356507686|ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 368
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 214/339 (63%), Gaps = 10/339 (2%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
TW++ FV+ I +F+ TM VN+C NS CV + LGRFSFQP ENPLLGPS L +
Sbjct: 31 TWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQPLGRFSFQPLPENPLLGPSQSKLDE 90
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGAL + + + HQ WRL T +LH G+FH+L N+ S++ +G+ LE FG IR+G++Y +
Sbjct: 91 MGALRWNLLTEHHQTWRLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGIIYAL 150
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
S F GSL+++LF+Q+ +VGASGAL+GLLG++LSEL+ NW ++NK +LV + N
Sbjct: 151 SAFVGSLVASLFLQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCN 210
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR------YALSGYSALSRRKF 289
+G LP+VDNFA +GGFISGFLLG VFL+ PQ V Y + Y L ++
Sbjct: 211 FVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQPVAPNKGGLIDYGVKSYVKLKLKEK 270
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS 349
+ + +L IVSL+L + L LV +L G++ + +C+WC Y+ C+P + W C+ C
Sbjct: 271 LD-RPVLRIVSLILFSLLLAGCLVAVLHGINISSYCTWCPYVDCIPFTSWHCKDTETSCE 329
Query: 350 TTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
T QL +TC NG ++ +N S ++ LC +C
Sbjct: 330 TMVSNAQLTMTCIGNGNFRVFPFTNISRARFNDLCNLIC 368
>gi|168027788|ref|XP_001766411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682320|gb|EDQ68739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/284 (53%), Positives = 203/284 (71%), Gaps = 6/284 (2%)
Query: 66 VVANIAMFVITMYVNNCPKNSV---SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALD 122
VVAN+ +F+I MY NNCP N + CV R SFQP+ +NPLLGPSS TLQ+MG L
Sbjct: 25 VVANVIIFIIVMYDNNCPANIIPPDRCVLGSFRRMSFQPWNQNPLLGPSSATLQRMGGLM 84
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
VVD+ QGWRL++C WLH GVFH++ NM +LL+ GI+LE+EFG IRVGLLY+ISG GG
Sbjct: 85 TFLVVDQQQGWRLMSCVWLHAGVFHLVINMTALLIFGIQLEKEFGIIRVGLLYLISGLGG 144
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT--LVVIIAINLAVGI 240
LLS LF ISVGASGALFGL G+ L+ELITNW+ + N+ LT L+++ A+N ++G+
Sbjct: 145 GLLSTLFNSHAISVGASGALFGLAGATLAELITNWSHFHNRCSLTWQLIIVAAVNFSIGL 204
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS-GYSALSRRKFMTYQCILWIV 299
+P VDNFAHIGGFI+G LLGFV L++ Q+G+V QR + +R+F YQ +L++
Sbjct: 205 MPRVDNFAHIGGFITGLLLGFVLLMKEQYGYVWQRDLVDPNIERPMKRRFKVYQIVLFVA 264
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
S++L+I G G + L VD N+ C WC ++CVP+ RWSC +
Sbjct: 265 SILLLITGFIAGFIALYNNVDINEICRWCRRINCVPSPRWSCNS 308
>gi|332148745|dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]
Length = 385
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 207/342 (60%), Gaps = 9/342 (2%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS-CVARFLGRFSFQPFKENPLLGPSSVT 114
K TWL+ FV+ I +F +TM VN+C NS C A+ LGRFSFQ ENP+LGPS+ T
Sbjct: 45 KRDTWLVSVFVLLQIVLFAVTMGVNDCSGNSHGHCSAKLLGRFSFQSLSENPMLGPSAST 104
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+ MG L + + H+ WR++T WLH G+FH+ N+ SL+ +GI +EQ+FG +R+ ++
Sbjct: 105 LEHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVI 164
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVII 232
Y +SG GSL + LF+++ S+ + A FGL+G+MLS L NW +Y +K + I
Sbjct: 165 YFLSGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIFTIF 224
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV----EQRYALSGYSALSRRK 288
+N +G LP +DNFA+IGGFISGFLLGFV L +PQ + + + + +R K
Sbjct: 225 TVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLK 284
Query: 289 FMTYQCILWIVSLVLVIVGLTLG-LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
+ +L I+ L LV G+ G L+ GV+ N HC WC Y+ CVPT +WSC
Sbjct: 285 EQFDRPVLRIICL-LVFCGILAGVLLAACWGVNLNRHCHWCRYVDCVPTKKWSCSDMTTS 343
Query: 348 CSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
C QL +TC +NGK ++ +N S ++ + LCT +CS
Sbjct: 344 CEAMVSDAQLTLTCMANGKFRIFPFTNISQARTEDLCTLVCS 385
>gi|195622898|gb|ACG33279.1| membrane protein [Zea mays]
Length = 226
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 185/229 (80%), Gaps = 6/229 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF+R+G +Y++
Sbjct: 1 MGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLL 60
Query: 178 SGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAI 234
SGFGGS+LSALF++ S ISVGASGALFGLLGSMLSEL+ NWTIY+NK +TL+ IIA+
Sbjct: 61 SGFGGSVLSALFLRNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIIAL 120
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
NLA+GILPHVDNFAHIGGF +GFLLGFV L RPQF W+E + L + K+ YQ
Sbjct: 121 NLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWMES-HELPHTN--QPPKYKAYQY 177
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
ILW+V+LVL++VG + LVML +G + ND C WCHYL+CVPTS+W C T
Sbjct: 178 ILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKCNT 226
>gi|255545576|ref|XP_002513848.1| KOM, putative [Ricinus communis]
gi|223546934|gb|EEF48431.1| KOM, putative [Ricinus communis]
Length = 389
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 211/343 (61%), Gaps = 7/343 (2%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGP 110
K ++ TWLI FV+ ++ F+ TM VN+C NS C + LGR SFQP ENPLLGP
Sbjct: 47 KSRRRRDTWLISIFVIIHLGAFIATMIVNDCSTNSYGDCAIKTLGRLSFQPLSENPLLGP 106
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S+ TL KMGAL + V++ HQ WRL +C WLH G+ H++ +++ ++ +GI LEQEFG +R
Sbjct: 107 SASTLDKMGALRRTLVIE-HQTWRLFSCPWLHAGLIHLIIDLIGVIFLGIYLEQEFGPLR 165
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV- 229
VG++YI+S F GSL++ALF++ + V +SGA GLLG+ S L+ NW +TNK L+
Sbjct: 166 VGIIYILSAFFGSLVTALFVRDSPVVSSSGAQLGLLGATFSALVRNWKSHTNKVAAVLIH 225
Query: 230 -VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYA---LSGYSALS 285
+ A N+ +G+LP+ DN+++IGG ISGFLLGFV L PQ + + + G ++
Sbjct: 226 FFVFACNVMLGLLPYADNYSNIGGLISGFLLGFVLLYTPQLRKLAPKKSGLYDDGLKSVL 285
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEP 345
K + +L VSL+L V L LV L+G++ + +C WC Y C+P+ WSC
Sbjct: 286 NLKQKLDRPVLRTVSLLLFSVLLVGFLVAALQGINISHYCKWCGYFDCIPSKSWSCNDVT 345
Query: 346 AFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
C +L +TC SNG + +N S ++ + LCT +C
Sbjct: 346 TSCEIMSSDAELTLTCMSNGNFKVLPFANMSEARTRDLCTLIC 388
>gi|186520951|ref|NP_001119182.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|332003745|gb|AED91128.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 299
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 215/348 (61%), Gaps = 59/348 (16%)
Query: 1 MAARESPPGIQIKVNSKG-GGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVT 59
MA + ++ +G G G N + P P V+ +G+ S +W +
Sbjct: 1 MAVGDDDLENRMSAKDRGIGSRGGDRNRIGPP-----PLPVALSSSTEFGDNALSSRWTS 55
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVS------CVARFLGRFSFQPFKENPLLGPSSV 113
WL+P FVVAN+A+FV+ M+VNNCP + S CVA+FLGR SF+P + NPL GPSS
Sbjct: 56 WLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSH 115
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL+K+GAL+ SKVV+K +GWRL+TC WLH GV H+ ANMLSL+ IGIRLEQ+FGF+R+G+
Sbjct: 116 TLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGV 175
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
+Y++SG GGS+LS+LFI+++ISVGASGALFGLLGSMLSEL TNWTIY+NK
Sbjct: 176 IYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNK---------- 225
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
F W+ + + G R K+ TYQ
Sbjct: 226 -----------------------------------FKWLAREHMPQGTPL--RYKYKTYQ 248
Query: 294 CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+LW++SLVL+I G + L+ML RG + NDHC WCHYL CVPTS W C
Sbjct: 249 YLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRC 296
>gi|168067654|ref|XP_001785725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662631|gb|EDQ49460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 162/316 (51%), Positives = 214/316 (67%), Gaps = 13/316 (4%)
Query: 41 SAPP-----PAVYGEI-KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN---SVSCV- 90
S PP P+ Y KH K VVANI +F++ MY NNCP +CV
Sbjct: 6 SPPPHNGNYPSYYAPPRKHEKSHWPIFTLVAVVANIIVFIVVMYENNCPAKIGPGRTCVL 65
Query: 91 ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
R SFQP+ ENPLLGPSS TL KMG L VVD+ +GWRL++C WLH GVFH+L
Sbjct: 66 GSSFKRMSFQPWSENPLLGPSSATLVKMGGLRTVLVVDQKEGWRLMSCVWLHAGVFHLLV 125
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML 210
NM+++LV+G+ LE+ FGFIRVG+LY+ SG GGSLLS+LF Q+ +SVGASGALFGLLG +
Sbjct: 126 NMIAVLVLGLPLEKTFGFIRVGVLYLASGLGGSLLSSLFNQNGVSVGASGALFGLLGGTI 185
Query: 211 SELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
S++I NW++Y+N L L+++ AINLA+G+LP VDNFAHIGGF++G LLG V L++ Q
Sbjct: 186 SDVIINWSLYSNYCGVLLNLIILAAINLAIGLLPLVDNFAHIGGFLTGLLLGCVLLMKTQ 245
Query: 269 FGWVEQRYALS-GYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSW 327
G+V +R L + +F +Q IL+I+S +++I G G V L VDA+ CSW
Sbjct: 246 HGYVPRRDLLDPNMERPVKNRFNAFQIILFIISALVLIAGFIGGFVALYNRVDAHKKCSW 305
Query: 328 CHYLSCVPTSRWSCRT 343
CHYL+CVP+S W+C +
Sbjct: 306 CHYLNCVPSSHWTCDS 321
>gi|255553147|ref|XP_002517616.1| KOM, putative [Ricinus communis]
gi|223543248|gb|EEF44780.1| KOM, putative [Ricinus communis]
Length = 303
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 197/269 (73%), Gaps = 5/269 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS---CVARFLGRFSFQPFKENPLLGPS 111
+KW +WL+P NI +FV TMYVN+CP + + + LGRFSFQP +EN +LGPS
Sbjct: 32 EKWRSWLVPVIFSVNITIFVYTMYVNDCPAKTGADKCLLYDLLGRFSFQPLQENAVLGPS 91
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
+TL+++GALD +V + WR +C WLH GV H+ NM+SLL IGIRLE+EFGF+R+
Sbjct: 92 VITLERLGALDPMAIVKNGEAWRFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFGFLRI 151
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
GLLY++SGFGGSL+S+L + +ISVGASGAL GLLGSMLSEL+ NWTIY NK TL+
Sbjct: 152 GLLYVLSGFGGSLMSSLRRKPSISVGASGALLGLLGSMLSELLMNWTIYANKCSAISTLL 211
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
+IIA+NLA G++PHVDN AHIGGF+SGFLLGF+ L+RPQ+G+V RY GY+ + K
Sbjct: 212 LIIALNLAFGLIPHVDNSAHIGGFLSGFLLGFILLMRPQYGYVSSRYIPVGYNIKKKSKH 271
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRG 318
YQ +L I +LV++IVG GL L G
Sbjct: 272 KCYQYLLLITALVVLIVGYIWGLAALYGG 300
>gi|147766525|emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
Length = 448
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 200/330 (60%), Gaps = 23/330 (6%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSV 113
K+ +W+I FVV +I F TM+VN+C +NS C + LGR SFQP ENPLLGPSS
Sbjct: 39 KREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKVLGRLSFQPLWENPLLGPSSS 98
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL +MGAL + + + HQ WRL TC WLH G H++ N+ S++ +GI LEQEFG
Sbjct: 99 TLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFG------ 152
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVI 231
LF+Q + +VG+SGALFGLLGSMLS LI NW +YT+K L+++
Sbjct: 153 -----------PPXLFLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLV 201
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV-EQRYALSGYSALSRRKFM 290
IN A+G+LP+VDNF+++GGFISG LLGFV L P+ + E++ Y +
Sbjct: 202 AVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMXEKKGGFFDYXVKKSXRLX 261
Query: 291 TY--QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFC 348
+ +L VS VL + L +V +L G+D N +CSWC Y++CVP++RWSC T+ C
Sbjct: 262 QKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNRWSCNTKVTAC 321
Query: 349 STTQDGNQLNVTCSSNGKSNLYILSNPSSS 378
T ++ +L VTC Y L PS++
Sbjct: 322 QTMENAGRLTVTCMGKDNFRHYDLVIPSTT 351
>gi|302782782|ref|XP_002973164.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
gi|300158917|gb|EFJ25538.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
Length = 286
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 194/279 (69%), Gaps = 10/279 (3%)
Query: 61 LIPCFVVANIAMFVITMYVNNCP--KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKM 118
++P FV+ANI +F+ITMY N+CP + C+ L RFSFQP +NPLLGPSS TL +M
Sbjct: 7 IVPIFVIANIVVFIITMYRNDCPAHQTEYRCILPGLKRFSFQPLSQNPLLGPSSNTLLRM 66
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GAL+ V +GWRL++C WLH GVFH+L NML LL +G+++EQEFGF+++G +Y+I+
Sbjct: 67 GALESELVTSGREGWRLVSCIWLHAGVFHLLLNMLGLLTLGLQMEQEFGFLKLGFVYLIA 126
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--TLVVIIAINL 236
GFGGSLLSALF++ ISVGASGALFGL+G++LSEL+ NW+ + F LVV+ INL
Sbjct: 127 GFGGSLLSALFLRLTISVGASGALFGLMGALLSELLINWSHHERSWFTLSQLVVLFIINL 186
Query: 237 AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR----RKFMTY 292
A+G +PHVDN+AH+GG ISG LLGF+ L RP W Q + Y SR Y
Sbjct: 187 ALGKMPHVDNYAHLGGCISGILLGFILLQRPPLTWPTQPHL--PYQPPSRPWRIYSLPKY 244
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYL 331
+ ++W+++L L++V + L+ML RGVD C WC L
Sbjct: 245 KFVIWVIALNLLVVLYVVALIMLFRGVDVRKKCKWCRQL 283
>gi|297842567|ref|XP_002889165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335006|gb|EFH65424.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 190/299 (63%), Gaps = 9/299 (3%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
TWL+ FV+ I +F +TM VN+C +NS C A+ LGRFSFQP ENP+LGPS+ TL+
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDCSRNSHGHCAAKLLGRFSFQPLSENPMLGPSASTLEH 107
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MG L + + + H+ WR++T WLH G+FH+ N+ SL+ +GI +EQ+FG +R+ ++Y++
Sbjct: 108 MGGLSWNTLTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYLL 167
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SG GSL + LF+++ S+ + A FGL+G+MLS L NW +YT K + + I +N
Sbjct: 168 SGIMGSLFAVLFVRNISSISSGAAFFGLIGAMLSALAKNWNLYTGKISALVIIFTIFTVN 227
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR----KFMT 291
+ +G LP +DNFA+IGGFISGFLLGFV L +PQ + + + + R K
Sbjct: 228 ILIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDTNRSTRLKDQF 287
Query: 292 YQCILWIVSLVLVIVGLTLG-LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS 349
+ +L I+ LV V G+ G L+ + GV+ N HC WC Y+ CVPT+RWSC C
Sbjct: 288 DRPVLRIICLV-VFCGMLAGVLLAVCWGVNLNRHCHWCRYVDCVPTNRWSCSDMTTSCE 345
>gi|167999275|ref|XP_001752343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696738|gb|EDQ83076.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 204/337 (60%), Gaps = 6/337 (1%)
Query: 58 VTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSVTLQ 116
V W+ F +A+ + ++TM+ N+CP ++ +C+ +F+ QPF ENPLLGPS+ TL
Sbjct: 3 VPWISMAFTIAHTVILIVTMHQNDCPSHTQTACLNPSFHKFAMQPFDENPLLGPSAKTLL 62
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
+GAL+ + +GWRL++ WLH GV HI +L++GI LE++ GF++VG++YI
Sbjct: 63 SLGALESDLITKSREGWRLLSAMWLHAGVLHIAGTASGMLLLGIPLERQLGFVKVGVVYI 122
Query: 177 ISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAI 234
+SGF GS++SAL + +SVGASGA GLLG+ LS +I NW Y ++ + ++ A+
Sbjct: 123 LSGFLGSVISALMVHGRVSVGASGAFMGLLGATLSSIIVNWKSYRHRSRALMGVMFFTAL 182
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
N G++P DNF HIGG + GFL+G +F I+ F + L++RK +
Sbjct: 183 NAVFGLMPLADNFMHIGGAVMGFLIGNLFFIKQNFRCWKSSMVYDRNDMLAKRKNIIILD 242
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF-CSTTQD 353
I+W++S+ +I T+GL L G++ ++ CSWC YL+C P+ W C + C+ +
Sbjct: 243 IVWLLSIGALIAASTMGLFALFSGMEISNGCSWCQYLTCAPSKFWKCSGDRHLGCNLSSV 302
Query: 354 GNQLNVTCSSNGKSNLYIL--SNPSSSQIQSLCTELC 388
G+ L VTC+S + + +N +S+IQ LC + C
Sbjct: 303 GSGLRVTCASGQYFDYSTVRYANKLTSEIQGLCIKAC 339
>gi|357461731|ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]
gi|355490195|gb|AES71398.1| Rhomboid family member [Medicago truncatula]
Length = 332
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 208/332 (62%), Gaps = 10/332 (3%)
Query: 66 VVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVS 124
V+ + F+ TM VN+C NS C LGRFSFQP ENPLLGPS L +MGAL +
Sbjct: 2 VLIQLGFFIATMLVNDCFTNSHGDCTFPSLGRFSFQPLAENPLLGPSMSKLDEMGALQKN 61
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
+ ++HQ WRL T +LH G+FH++ N+ S++ +GIRLEQEFG +R+G++YI+S F G+L
Sbjct: 62 FLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGAL 121
Query: 185 LSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILP 242
+++LF+Q+ VG+SGALFGLLG++LSEL+ NW +T K + V I N +G LP
Sbjct: 122 MASLFLQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLGFLP 181
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWV------EQRYALSGYSALSRRKFMTYQCIL 296
+VDNF+ IGGFISGFLLG V L PQF V + Y L Y L ++ + + +
Sbjct: 182 YVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLKSYIKLKLKQKLD-RPVS 240
Query: 297 WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQ 356
IVSL+L + L L+ +L G++ N +C+WC Y+ C+P + W C+ FC T
Sbjct: 241 RIVSLILFTLLLAGCLLAVLYGININSYCTWCPYVDCIPFTSWHCKDRETFCETMVSNAH 300
Query: 357 LNVTCSSNGKSNLYILSNPSSSQIQSLCTELC 388
L +TC NG ++ +N S ++I LC +C
Sbjct: 301 LTMTCLGNGNFKVFHYTNISRARINDLCNLIC 332
>gi|168024910|ref|XP_001764978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683787|gb|EDQ70194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 192/325 (59%), Gaps = 20/325 (6%)
Query: 48 YGEIKHSKKWVT-WLIPCFVVANIAMFVITMYVNNCPKNSVS-----CVARFLGRFSFQP 101
YG+ + ++ T WLIP + ++ F++ M NNC + + C+ F+ RF FQP
Sbjct: 26 YGQKREIERGQTSWLIPALALIHLIAFILVMSHNNCDRKGSNGGENVCIFNFVRRFPFQP 85
Query: 102 FKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIR 161
ENPLLGPS+++L GAL+ V +GWR++T LH G+FH++ N+ L +G++
Sbjct: 86 LSENPLLGPSAISLLDFGALESELVGRAGEGWRMLTTLSLHAGIFHLVGNLAGLFYVGLQ 145
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI-- 219
LE+EFGF++V L+Y ++GF G+L S LF+ +SVGASGA GL+G+ L+E++ NW +
Sbjct: 146 LEREFGFLKVMLIYYLAGFAGALASVLFMHGRVSVGASGATMGLIGARLAEVVMNWNVSK 205
Query: 220 YTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV--EQRYA 277
+ + ++ + L G+LP +DNF H+GGF++G LLG V LIRPQ WV EQ +
Sbjct: 206 HRTRSIVSTSFFLVGTLVYGLLPLMDNFMHLGGFLTGSLLGNVLLIRPQAEWVNYEQCFP 265
Query: 278 LSGYSAL---SRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
Y +R K Q +LWIVSL +++ G L G+DA CSWCHY++C+
Sbjct: 266 AVVYDVDDLPARSKHSRGQKVLWIVSLNILVAGYIAAAFALYTGMDARRRCSWCHYMACI 325
Query: 335 PTSRWSCR-------TEPAFCSTTQ 352
PT W C PA S T+
Sbjct: 326 PTDLWKCHGNRNIVCDNPALSSHTR 350
>gi|145337690|ref|NP_177909.2| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
gi|332197915|gb|AEE36036.1| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
Length = 351
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 183/299 (61%), Gaps = 9/299 (3%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNSVS-CVARFLGRFSFQPFKENPLLGPSSVTLQK 117
TWL+ FV+ I +F +TM VN+C NS C A+ LGRFSFQ ENP+LGPS+ TL+
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDCSGNSHGHCSAKLLGRFSFQSLSENPMLGPSASTLEH 107
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MG L + + H+ WR++T WLH G+FH+ N+ SL+ +GI +EQ+FG +R+ ++Y +
Sbjct: 108 MGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFL 167
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
SG GSL + LF+++ S+ + A FGL+G+MLS L NW +Y +K + I +N
Sbjct: 168 SGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVN 227
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV----EQRYALSGYSALSRRKFMT 291
+G LP +DNFA+IGGFISGFLLGFV L +PQ + + + + +R K
Sbjct: 228 FLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQF 287
Query: 292 YQCILWIVSLVLVIVGLTLG-LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS 349
+ +L I+ L LV G+ G L+ GV+ N HC WC Y+ CVPT +WSC C
Sbjct: 288 DRPVLRIICL-LVFCGILAGVLLAACWGVNLNRHCHWCRYVDCVPTKKWSCSDMTTSCE 345
>gi|215768970|dbj|BAH01199.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/202 (62%), Positives = 162/202 (80%), Gaps = 4/202 (1%)
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAH 249
SNISVGASGALFGLLGSMLSELITNWTIY NK LTLV+II INLAVGILPHVDNFAH
Sbjct: 3 SNISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAH 62
Query: 250 IGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVGL 308
+GGF SGF LGFV L+RPQFG++ Q+ + G ++ K+ TYQ ILW+++ +++I G
Sbjct: 63 LGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISGF 122
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSN 368
T+G +++L+G +A++HCSWCHYLSCVPTS+WSC T +C ++Q GNQLN+TC SNGK+
Sbjct: 123 TIGFILVLKGFNASEHCSWCHYLSCVPTSKWSCNTPNNYCMSSQLGNQLNLTCESNGKTE 182
Query: 369 LYILSNPSSSQ-IQSLCTELCS 389
Y L+NP+S++ I+ LC LCS
Sbjct: 183 AYTLNNPNSTEAIKHLCVHLCS 204
>gi|357142172|ref|XP_003572482.1| PREDICTED: uncharacterized protein LOC100827999 [Brachypodium
distachyon]
Length = 364
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 186/291 (63%), Gaps = 15/291 (5%)
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNS----VSCVARFLGRFSFQPFKENPLLGPSSVTLQ 116
+P + +++F I MYVN+CP N+ SCVA GR SFQP ENPLLGPS TL+
Sbjct: 79 FVPYVICVCVSVFSIVMYVNDCPGNTPGAAASCVAAGFGRVSFQPIHENPLLGPSYATLE 138
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
KMGALD +KVV HQ RL TC W+H G+ H+ LSL G+R EQ+FGF+R+ ++Y+
Sbjct: 139 KMGALDWAKVVHGHQISRLFTCFWVHAGLIHLFVTQLSLCSFGVRFEQQFGFLRIVIIYL 198
Query: 177 ISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIA 233
+SG GGS+LSALF+ + ++SVGASG + GL+G+M+SE+ NW Y+N+ L +I
Sbjct: 199 LSGLGGSVLSALFLPAGSVSVGASGPVLGLIGAMVSEIAINWNAYSNRKPALAILGLIAV 258
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRP-QFGWVEQRYALSGYSALSRRKFMTY 292
IN+ +GI PH DNF +IGGF++GFLLGF+ L P + G++ Q + K+ +Y
Sbjct: 259 INMVMGIFPHTDNFTNIGGFLTGFLLGFLVLADPARIGFLPQS------RTSEQPKYKSY 312
Query: 293 QCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
++ SL+L++VG + L +L G + +L+CVPTS W C +
Sbjct: 313 HYAVFGASLLLLLVGFAVALTVLFEGKNGGGGGGGL-FLNCVPTSGWKCSS 362
>gi|414867426|tpg|DAA45983.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 184
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 146/175 (83%), Gaps = 3/175 (1%)
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
+RVG++Y++SG GGS+LS+LFI++NISVGASGALFGLLG+MLSEL TNWTIY NK +
Sbjct: 9 VRVGIIYLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALV 68
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
TL+V+IAINLA+GILPHVDNFAHIGGF++GFLLGFV L+RP +GW+ QRYAL +
Sbjct: 69 TLLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWM-QRYALPSDVKYTT 127
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+K++ YQ L V+ VL ++G +GL ML RGV+ANDHC WCHYLSCVPTSRWSC
Sbjct: 128 KKYLAYQWALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSC 182
>gi|414886371|tpg|DAA62385.1| TPA: hypothetical protein ZEAMMB73_763535 [Zea mays]
Length = 211
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 145/175 (82%), Gaps = 4/175 (2%)
Query: 53 HSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV---SCVARFLGRFSFQPFKENPLLG 109
+KW WL+P +VA IA+FV+ MY NNCPK+ CVA FL RFSFQP +ENPLLG
Sbjct: 31 EERKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGDCVAGFLRRFSFQPLRENPLLG 90
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PSS TL+KMGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+FGF+
Sbjct: 91 PSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFV 150
Query: 170 RVGLLYIISGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTNK 223
R+G +Y++SGFGGS+LSALF++ S ISVGASGALFGLLGSMLSEL+ NWTIY+NK
Sbjct: 151 RIGAIYLLSGFGGSVLSALFLRNSYISVGASGALFGLLGSMLSELLMNWTIYSNK 205
>gi|449522305|ref|XP_004168167.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 380
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 190/318 (59%), Gaps = 13/318 (4%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
T ++ FV+ +I F+ M VN+C NS C LGR SFQP ENPLLGPS+ TL+K
Sbjct: 62 TCVVSVFVLLHIVAFIAMMLVNDCWSNSHQDCAFGVLGRMSFQPLAENPLLGPSASTLEK 121
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MG L + + Q WRL T +H G+ H++ N+ S++ +GI+LE E+G +R G++Y++
Sbjct: 122 MGGLQRKSLTEYRQIWRLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYLL 181
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL---VVIIAI 234
S + G+L++ALF Q++ SVG+SGALFGLLG+M+S +I NW +YT++ FL L + + AI
Sbjct: 182 SAYTGTLVAALFAQNSPSVGSSGALFGLLGAMISGIIRNWKLYTDR-FLALGSVLAVFAI 240
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLI-------RPQFGWVEQRYALSGYSALSRR 287
N +G+LP++DNFA++GG ++G LLGF+ L + Q Y Y L +
Sbjct: 241 NFGLGLLPYIDNFANVGGLVAGVLLGFIILFTLQDRQEKAQTKGYSLSYGFKNYFNLEMK 300
Query: 288 KFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAF 347
+ + + IL SL L + L+ + D N +C WC Y+ CVP +W C+
Sbjct: 301 QKLD-KPILRCTSLFLFALLFCGSLIGVAFEFDLNQYCIWCRYIDCVPFMKWHCKDVAFS 359
Query: 348 CSTTQDGNQLNVTCSSNG 365
C+ +L +TC + G
Sbjct: 360 CAAMVSDQELTLTCLTTG 377
>gi|168040858|ref|XP_001772910.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675821|gb|EDQ62312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 192/329 (58%), Gaps = 20/329 (6%)
Query: 31 VEEMDRPQGVSAPP----PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN- 85
V + D +PP P + KH ++ +P ++ NI +F++ MY NNCP +
Sbjct: 31 VHDHDEHTFEPSPPVPQKPQPFNPKKH--RYFPIAVPVIMIGNIVVFIMMMYYNNCPDHI 88
Query: 86 --SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHG 143
CV ++ SFQP+ ENP+LGP + + K G L S V DK QGWRL++ L+G
Sbjct: 89 QPGRKCVGAWMKPMSFQPWDENPMLGPRAAAILKWGGLLSSLVTDKGQGWRLVSSIALNG 148
Query: 144 GVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALF 203
GVF ++AN+ +LL +G+R+E F F RV ++Y SGFGG++LS LFIQ + V AS A+
Sbjct: 149 GVFQLIANLTALLGVGLRIETYFWFTRVAIIYATSGFGGNVLSTLFIQDQVFVSASAAVM 208
Query: 204 GLLGSMLSELITNW--TIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
GL+G+ L++++TNW T + L++ I+L G++P VDNFA+ GGF +GF LGF
Sbjct: 209 GLIGASLADVLTNWDMTEWKLLKLTDLLLFSLISLGFGLMPQVDNFANAGGFFTGFCLGF 268
Query: 262 VFLIRPQFGWVEQRY--ALSGYSALSR-------RKFMTYQCILWIVSLVLVIVGLTLGL 312
V L+RPQ G+ + R+ L + S+ + Q + I++ ++VI L G
Sbjct: 269 VLLMRPQRGFKDTRHLSQLEAFIVNSQDPDLPPVKMHNKKQRSMQILASIVVIGLLAAGT 328
Query: 313 VMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
V+L + N CSWC Y +CVP +W+C
Sbjct: 329 VVLFINMKVNKGCSWCRYAACVPDLKWTC 357
>gi|6573780|gb|AAF17700.1|AC009243_27 F28K19.7 [Arabidopsis thaliana]
Length = 735
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 197/365 (53%), Gaps = 41/365 (11%)
Query: 56 KWVTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVARF--LGRFSFQPFKENPLLGPSS 112
K TWL+ FV+ I +F +TM VN+C NS VS + F + S + +N
Sbjct: 45 KRDTWLVSVFVLLQIVLFAVTMGVNDCSGNSHVSKIDEFQLIHSVSISDYSDNR------ 98
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
Q MG L + + H+ WR++T WLH G+FH+ N+ SL+ +GI +EQ+FG +R+
Sbjct: 99 ---QHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIA 155
Query: 173 LLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFL---- 226
++Y +SG GSL + LF+++ S+ + A FGL+G+MLS L NW +Y + K FL
Sbjct: 156 VIYFLSGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKVKDFLWFCF 215
Query: 227 -----------------TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
+ I +N +G LP +DNFA+IGGFISGFLLGFV L +PQ
Sbjct: 216 VSCYLLLIAFLIISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQL 275
Query: 270 GWV----EQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLL-RGVDANDH 324
+ + + + +R K + +L I+ L LV G+ G+++ GV+ N H
Sbjct: 276 RQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICL-LVFCGILAGVLLAACWGVNLNRH 334
Query: 325 CSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSLC 384
C WC Y+ CVPT +WSC C QL +TC +NGK ++ +N S ++ + LC
Sbjct: 335 CHWCRYVDCVPTKKWSCSDMTTSCEAMVSDAQLTLTCMANGKFRIFPFTNISQARTEDLC 394
Query: 385 TELCS 389
T CS
Sbjct: 395 TLSCS 399
>gi|449466454|ref|XP_004150941.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 374
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 195/343 (56%), Gaps = 13/343 (3%)
Query: 33 EMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNS-VSCVA 91
+M P+ + + + T ++ FV+ +I F+ M VN+C NS C
Sbjct: 9 KMHIPKNLDELKIPFFKSSSRRPRGDTCVVSVFVLLHIVAFIAMMLVNDCWSNSHQDCAF 68
Query: 92 RFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILAN 151
LGR SFQP ENPLLGPS+ TL+KMG L + + Q WRL T +H G+ H++ N
Sbjct: 69 GVLGRMSFQPLAENPLLGPSASTLEKMGGLQRKSLTEYRQIWRLFTFPCMHAGLIHLVIN 128
Query: 152 MLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS 211
+ S++ +GI+LE E+G +R G++Y++S + G+L++ALF Q++ SVG+SGALFGLLG+M+S
Sbjct: 129 LGSVIFVGIQLELEYGPVRTGIIYLLSAYTGTLVAALFAQNSPSVGSSGALFGLLGAMIS 188
Query: 212 ELITNWTIYTNKHFLTL---VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLI--- 265
+I NW +YT++ FL L + + AIN +G+LP++DNFA++GG ++G LLGF+ L
Sbjct: 189 GIIRNWKLYTDR-FLALGSVLAVFAINFGLGLLPYIDNFANVGGLVAGVLLGFIILFTLQ 247
Query: 266 ----RPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDA 321
+ Q Y Y L ++ + + IL SL L + L+ + D
Sbjct: 248 DRQEKAQTKGYSLSYGFKNYFNLEMKQKLD-KPILRCTSLFLFALLFCGSLIGVAFEFDL 306
Query: 322 NDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSN 364
N +C WC Y+ CVP +W C+ C+ + L ++ S
Sbjct: 307 NQYCIWCRYIDCVPFMKWHCKDVAFSCALHCQIHMLRISISQT 349
>gi|54290319|dbj|BAD61123.1| putative membrane protein [Oryza sativa Japonica Group]
gi|54290396|dbj|BAD61266.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 148/192 (77%), Gaps = 18/192 (9%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN-----------------SVSC-VA 91
E + ++W +L+P FVV N+A+FV+TMY+N+CP + S C +
Sbjct: 62 EFRPFRRWFPFLVPFFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCWLE 121
Query: 92 RFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILAN 151
LGRF+FQ +KENPL+GPSS TL KMGAL+ SKV + H+GWRLITC WLH GV HILAN
Sbjct: 122 PELGRFAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHILAN 181
Query: 152 MLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS 211
MLSLL+IGIRLE+EFGF+R+G LY+ISG GGSLLSALF+ SNISVGASGALFGLLGSMLS
Sbjct: 182 MLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSMLS 241
Query: 212 ELITNWTIYTNK 223
ELITNWTIY NK
Sbjct: 242 ELITNWTIYENK 253
>gi|168001759|ref|XP_001753582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695461|gb|EDQ81805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 196/346 (56%), Gaps = 20/346 (5%)
Query: 15 NSKGGGGSGSGNTVHPVEEMDRPQGVSAPPPAVYGE----IKHSKKWVTWLIPCFVVANI 70
+ + G G V D + P P V + I ++ +P +V +I
Sbjct: 13 SPRDGARPGDNRGEFRVRVHDHDEHSFEPTPEVPQKPQPFIPRKHRYFPIAVPVIMVGSI 72
Query: 71 AMFVITMYVNNCPKN---SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVV 127
+F++ M N+CPK+ CV +L SFQP+ ENP+LGP + K G ++ S V
Sbjct: 73 VVFIMMMLYNDCPKHIAPGEKCVGEWLKPLSFQPWDENPMLGPRWRAIMKWGGVESSLVT 132
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
K +GWRL++ ++GGV ++ N+++LL++G+R+E F F +VG++Y +SGFGG++LS
Sbjct: 133 KKKEGWRLLSSIAVNGGVLQLIMNLIALLIVGLRMELYFWFFKVGIIYTMSGFGGNVLST 192
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVD 245
LFIQ+ + V AS AL GL+G+ +++ NW + K F+ L+V I+ G++P VD
Sbjct: 193 LFIQNQLFVSASAALLGLIGASFADIFINWDVVERKALKFVDLIVFGLISFGFGLMPQVD 252
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL----------SRRKFMTYQCI 295
NFA++GG +GF LGFVFL+RPQ G+ + R+ LS A + Q +
Sbjct: 253 NFANVGGLFTGFCLGFVFLLRPQRGYKDTRH-LSQLEAFIVNNQDPDLPPVKMHNKRQRV 311
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ +++ +L++ L G V+L V N CSWCHY +CVP +W+C
Sbjct: 312 MQLLAGLLLVGLLAAGTVLLFLEVKVNKGCSWCHYAACVPNLKWTC 357
>gi|224066895|ref|XP_002302267.1| predicted protein [Populus trichocarpa]
gi|222843993|gb|EEE81540.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 177/326 (54%), Gaps = 51/326 (15%)
Query: 59 TWLIPCFVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSS----- 112
T +I FV+ ++ +F+ITM VN+C NS C + LGR SFQP ENP LGPS+
Sbjct: 53 TCVIFAFVIIHLVVFLITMAVNDCGYNSHGDCAFKALGRMSFQPLLENPFLGPSASAPIF 112
Query: 113 ----------------------VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
+L KMGA+ + ++ +HQ WRL C LH GVFH +
Sbjct: 113 SPCLRMSRPVYWKPNAVVDKTEESLDKMGAIRKT-LLAEHQTWRLFMCPLLHAGVFHFMI 171
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML 210
N+L ++ +GI LE+EFG IR G++Y++S F G+L++A+F++ + +V +SGALFGLLG+ +
Sbjct: 172 NLLCIIFLGIYLEKEFGSIRTGIIYMLSAFSGTLVTAIFVRDSPAVCSSGALFGLLGATV 231
Query: 211 SELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
S L NW YTNK LTL + NL +G+LP++DN++ IG ISGFLLG V P+
Sbjct: 232 SALTRNWKFYTNKVAALLTLFFVAGFNLMLGLLPYMDNYSSIGSMISGFLLGLVLFYTPK 291
Query: 269 FGWVEQ-RYALSGYSALSRRKFMTYQCILWIVSLVL-VIVGLTLGLVMLLRGVDANDHCS 326
V Q + L Y S W L V+ +L L LL
Sbjct: 292 LRQVAQNKIGLCEYGVKSSFN--------WKQKLDRPVLRSASLILFSLL---------- 333
Query: 327 WCHYLSCVPTSRWSCRTEPAFCSTTQ 352
WC Y C+P RWSC + C T++
Sbjct: 334 WCRYTDCIPYKRWSCNDLTSSCETSK 359
>gi|413920155|gb|AFW60087.1| hypothetical protein ZEAMMB73_684125, partial [Zea mays]
Length = 191
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 117/140 (83%), Gaps = 1/140 (0%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR-FLGRFSFQPFKENPLLGPSSV 113
++W WL+ VA +A+F++TMYVN+CP ++ +C A FLGRF+FQP +ENPLLGPSS
Sbjct: 52 RRWSPWLVSGATVACVAIFLVTMYVNDCPTHNSNCAAAGFLGRFAFQPLRENPLLGPSSA 111
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL KMGALDV+KVV QGWRLITC WLH GV H+L NML LLV+GIRLEQEFGF+R+GL
Sbjct: 112 TLVKMGALDVAKVVHGRQGWRLITCMWLHAGVVHLLINMLCLLVVGIRLEQEFGFVRIGL 171
Query: 174 LYIISGFGGSLLSALFIQSN 193
+Y+ISGFGGSL+SALFIQS+
Sbjct: 172 VYLISGFGGSLMSALFIQSS 191
>gi|125524408|gb|EAY72522.1| hypothetical protein OsI_00383 [Oryza sativa Indica Group]
Length = 265
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/156 (69%), Positives = 131/156 (83%), Gaps = 3/156 (1%)
Query: 152 MLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS 211
MLSLL+IGIRLE+EFGF+R+G LY+ISG GGSLLSALF+ SNISVGASGALFGLLGSMLS
Sbjct: 1 MLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSMLS 60
Query: 212 ELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
ELITNWTIY NK LTLV+II INLAVGILPHVDNFAH+GGF SGF LGFV L+RPQF
Sbjct: 61 ELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQF 120
Query: 270 GWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLV 304
G++ Q+ + G ++ K+ TYQ ILW+++ +++
Sbjct: 121 GYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLII 156
>gi|356547428|ref|XP_003542114.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Glycine max]
Length = 258
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 139/219 (63%), Gaps = 31/219 (14%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+ +GAL+ + V D+++GWR +C +LH GV H+LANM LL IGIRLE+EFGF+++G L
Sbjct: 14 LRPLGALEKNLVEDQNEGWRFFSCMFLHAGVVHLLANMFGLLFIGIRLEKEFGFLKIGFL 73
Query: 175 YIISGFGGSLLSALFIQ----SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
++S FGGSLLS L +Q S +SV AS ALFGLLG+MLSEL+TNW+IY NK
Sbjct: 74 CMLSDFGGSLLSFLHLQESGVSTVSVDASSALFGLLGAMLSELLTNWSIYANKCLFVKRQ 133
Query: 231 IIA--------------INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
I+ +NLAVG LP VDN AHIGG ++G+ LGF+ L+RPQ+ +V +Y
Sbjct: 134 ILTHAYFSVLLLLIIVGLNLAVGFLPRVDNSAHIGGLLAGYFLGFILLMRPQYXYVNXKY 193
Query: 277 ALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVML 315
YQ I+S++++++G GL L
Sbjct: 194 K-------------WYQYFFLIMSVIILLLGYACGLAKL 219
>gi|357142169|ref|XP_003572481.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Brachypodium distachyon]
Length = 239
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 128/193 (66%), Gaps = 15/193 (7%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI----- 169
L+KMGALD +KV +HQGW LI+C WLH G+ + NML LL IGI LEQ FGF+
Sbjct: 21 LEKMGALDWAKVFHQHQGWHLISCIWLHAGLIRLFVNMLXLLFIGIHLEQXFGFVVSLAR 80
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK-----H 224
G++Y++SGFGGS+ S L I VGASGAL L SMLS+LI WT+Y+NK
Sbjct: 81 SHGIIYLLSGFGGSVQSVLLQNHYIFVGASGAL--XLCSMLSDLIVKWTVYSNKVSSCPV 138
Query: 225 FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
+TL+ I+ INLA+ I+PH D FA IGGF++ F +GFV L RP+FGW+ +R+ L +
Sbjct: 139 IITLLFIVLINLAIXIVPHADXFACIGGFVARFFVGFVLLARPKFGWM-KRHELPQTN-- 195
Query: 285 SRRKFMTYQCILW 297
K+ T Q +LW
Sbjct: 196 QPPKYKTXQYVLW 208
>gi|111278466|gb|ABH09088.1| putative membrane protein [Artemisia annua]
Length = 140
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 113/142 (79%), Gaps = 4/142 (2%)
Query: 205 LLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
LLG+MLSEL+TNWTIY NK TL++II +NLAVG+LPHVDNFAHIGGF++GFLLGFV
Sbjct: 1 LLGAMLSELLTNWTIYANKAAALFTLLIIILVNLAVGMLPHVDNFAHIGGFLTGFLLGFV 60
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
L+RPQF W ++R+ L A SR K+ YQ + W++SL+L++VG T+GLVML +G + N
Sbjct: 61 LLLRPQFAW-QERHNLP-VEARSRSKYTVYQYVFWLLSLILLVVGFTVGLVMLFKGENGN 118
Query: 323 DHCSWCHYLSCVPTSRWSCRTE 344
HCSWCHYLSCVPTSRW C +
Sbjct: 119 KHCSWCHYLSCVPTSRWRCDNQ 140
>gi|293334937|ref|NP_001169173.1| hypothetical protein [Zea mays]
gi|223975303|gb|ACN31839.1| unknown [Zea mays]
gi|414864371|tpg|DAA42928.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
gi|414864372|tpg|DAA42929.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
Length = 148
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 44 PPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCP-KNSVSCVARFLGRFSFQPF 102
P +Y + + ++WV WL+P VA+I +FV+TMY NNCP +++ CVARFLGRFSFQP
Sbjct: 21 PSPLYPQHEGEREWVPWLVPVIFVASITVFVVTMYANNCPARDTNKCVARFLGRFSFQPL 80
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
++NPL GPSS TL KMGAL KVV +HQGWRL++ WLH GV H++ANML LL IG+RL
Sbjct: 81 RQNPLFGPSSATLTKMGALVWEKVVHRHQGWRLLSSMWLHAGVIHLVANMLCLLFIGMRL 140
Query: 163 EQEFGFIR 170
EQ+FG+ R
Sbjct: 141 EQQFGYGR 148
>gi|110289434|gb|ABB47903.2| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
Length = 250
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/106 (72%), Positives = 97/106 (91%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGAL KVV +HQGWRL+TC WLH GV H+LANMLSL++IG+RLEQ+FG++R+G++Y++
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
SG GGS+LS+LFI+++ISVGASGALFGLLG+MLSEL TNWTIYTNK
Sbjct: 61 SGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNK 106
>gi|212275536|ref|NP_001130569.1| uncharacterized protein LOC100191668 [Zea mays]
gi|194689512|gb|ACF78840.1| unknown [Zea mays]
gi|414591380|tpg|DAA41951.1| TPA: hypothetical protein ZEAMMB73_621528 [Zea mays]
Length = 173
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 4/123 (3%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV----SCVARFLGRFSFQPFKEN 105
E + +KW WL+P +VA IA+FV+ MY NNCPKN CVA FL RFSFQP +EN
Sbjct: 30 EGEEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLREN 89
Query: 106 PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQE 165
PLLGPSS TL+KMGALD +K+V ++QGWRLI+C WLH G+ H++ NMLSLL IGIRLEQ+
Sbjct: 90 PLLGPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQ 149
Query: 166 FGF 168
FGF
Sbjct: 150 FGF 152
>gi|299471469|emb|CBN79420.1| Protein secE/sec61-gamma protein; Rhomboid-like protein [Ectocarpus
siliculosus]
Length = 766
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 13/237 (5%)
Query: 100 QPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIG 159
+ +ENP GPS TL + GA +VD WRLI+ +LH GV H L NML L +G
Sbjct: 443 ESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVG 502
Query: 160 IRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI 219
+E+ FG+ RV +Y++SG G+++SA+F+ + + VGASGA+FG+ G++ ++L NW++
Sbjct: 503 AMVERVFGWWRVASIYLVSGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSV 562
Query: 220 YTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYA 277
+ + F L ++ A+N+ +G++P +DNFAH GG + G +G L V++R
Sbjct: 563 NQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLL-------VQKRED 615
Query: 278 LSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
G R YQ L +V+ V V + LGL +L D + C WC +SCV
Sbjct: 616 DRG----DRLNKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCV 668
>gi|413920157|gb|AFW60089.1| hypothetical protein ZEAMMB73_222778 [Zea mays]
Length = 194
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 123/195 (63%), Gaps = 15/195 (7%)
Query: 209 MLSELITNWTIYTNKHFLTLVVIIAI--NLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
MLSELITNW++Y NK L +++ I NLA+G+LP VDNFAHIGG +SGFLLGFV +R
Sbjct: 1 MLSELITNWSLYANKVAALLTLLLVILSNLALGLLPRVDNFAHIGGLVSGFLLGFVVFVR 60
Query: 267 PQFGWVEQRY-----------ALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVML 315
P W+ Q+ A +A +RK TYQ +LW+ + L++ GLT V+L
Sbjct: 61 PHLDWLTQQQRSGGGGQGQQQAPPPVAAARKRKHRTYQYVLWLAAAALLVAGLTAATVLL 120
Query: 316 LRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCS-TTQDGNQLNVTCSSNGKSNLYILSN 374
RG DAN HC WCHYLSCVPT RW C P C+ TTQ+ N L+V C G + Y+++
Sbjct: 121 FRGYDANQHCPWCHYLSCVPTRRWRCDGSPTTCTATTQENNTLSVVCEG-GSNRTYVVAA 179
Query: 375 PSSSQIQSLCTELCS 389
S +I+ LC +LC+
Sbjct: 180 ASQDRIKDLCNQLCT 194
>gi|388506462|gb|AFK41297.1| unknown [Lotus japonicus]
Length = 136
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 105/135 (77%), Gaps = 4/135 (2%)
Query: 209 MLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
ML+ELITNWTIY+NK LTL+VII INLA+GILPHVDNFAHIGGF+ G LLGF+ L R
Sbjct: 1 MLAELITNWTIYSNKVMALLTLLVIIVINLAIGILPHVDNFAHIGGFLVGLLLGFILLPR 60
Query: 267 PQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCS 326
PQFGW+EQR+ +G + K+ YQ +L I SL+L++ GLT+ LVMLLRG + NDHC
Sbjct: 61 PQFGWLEQRHLPAGVRL--KSKYKAYQYVLLIASLILLVAGLTVALVMLLRGENGNDHCH 118
Query: 327 WCHYLSCVPTSRWSC 341
WC Y++ VPTS+W C
Sbjct: 119 WCRYITSVPTSKWEC 133
>gi|413919341|gb|AFW59273.1| hypothetical protein ZEAMMB73_333041 [Zea mays]
Length = 273
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 38 QGVSAPPPAVYGE--IKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR-FL 94
G PP Y + H + +WL+P V+AN+ MFV+ M+ NNCP++ CV R FL
Sbjct: 35 NGPYTPPSPFYYDPAAAHGRHHWSWLVPLVVIANVLMFVLVMFYNNCPRSGGDCVGRGFL 94
Query: 95 GRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLS 154
RFSFQP KENPLLGP++ TLQ+ GALD KVV +Q WRL +C WLH G+ H+LANM+S
Sbjct: 95 RRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAWRLESCTWLHAGLIHLLANMIS 154
Query: 155 LLVIGIRLEQEFGFIR 170
L+ IG+RLEQ+FGF +
Sbjct: 155 LIFIGVRLEQQFGFCK 170
>gi|268637931|ref|XP_002649151.1| rhomboid family protein [Dictyostelium discoideum AX4]
gi|256012943|gb|EEU04099.1| rhomboid family protein [Dictyostelium discoideum AX4]
Length = 489
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 163/297 (54%), Gaps = 38/297 (12%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLG 109
+++ K++V + I + ++ MF+ + N F+P+K NP G
Sbjct: 228 DMEPPKQFVPYFIIAISLIDLVMFIWEIIYNG----------------GFEPWKTNPWFG 271
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+S TL +GA S ++ + WR T +LH G+FH L NM++ L +G++LE+ +G
Sbjct: 272 PNSYTLLDVGA-KYSPLILNGEWWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERAYGGH 330
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLT 227
R+ +Y++ G G+L SA+ + +++ VGASGA+FG LG +L++LI NW++ +F +
Sbjct: 331 RIVPIYLLCGVAGNLCSAIMLPNSVQVGASGAIFGFLGVLLTDLIRNWSVLAKPWLNFGS 390
Query: 228 LVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
L+ I + AVG+ LP VDNFAH+GGFI+G L +FL +L+
Sbjct: 391 LLFSIITSFAVGLFLPGVDNFAHLGGFIAGILTAAIFL-----------------PSLTP 433
Query: 287 RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
++ + + +L ++ + L + V+ + +DA++ C C Y++C+ W C+T
Sbjct: 434 KRAIGKRLLLLMIVIPLTVALFVALFVVFYKNIDADEWCFGCKYITCLQVLSW-CKT 489
>gi|224008324|ref|XP_002293121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971247|gb|EED89582.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 257
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 144/258 (55%), Gaps = 26/258 (10%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
F+P NP++GPS+ TL ++GA + +V +++ WRL++ LH GV H L NM +L
Sbjct: 11 KFEPLSVNPMIGPSAETLLRLGAKESYLIVQENEIWRLVSPMVLHAGVIHFLLNMFALWY 70
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
+G +EQ GF + +++ GG++LSA+F+ I+VGASG +FGL+G+ +S+++ NW
Sbjct: 71 VGKAIEQIHGFFPAVVQFVVPAVGGTILSAIFLPEYITVGASGGIFGLIGACISDIVMNW 130
Query: 218 TIYTNK----------HFLTLVVI---IAINLAVGILPHVDNFAHIGGFISGFLLGF--V 262
+ N+ H LVV+ I +N VG+ P VDNF H+GG I GFL G +
Sbjct: 131 NLLFNEFVNERGVRLSHARVLVVLFLDIVVNCLVGLTPFVDNFTHLGGMILGFLCGLSTI 190
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
L+ P+F + ++R + L R F L++ + G+ + ++L G
Sbjct: 191 QLVSPRF-FGDERQRFYKFKLLFFRSF----------GLLVSMAGIIVSSIVLFSGDGET 239
Query: 323 DHCSWCHYLSCVPTSRWS 340
+ C+ C Y+SC+ W+
Sbjct: 240 NPCTSCTYMSCIAFPPWT 257
>gi|219109878|ref|XP_002176692.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411227|gb|EEC51155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 669
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 148/277 (53%), Gaps = 28/277 (10%)
Query: 82 CPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWL 141
C N ++ +A ++ + ENP++GPS+ TL +MGA D +V +GWRL+T L
Sbjct: 341 CTANMIASIA--ANDWTVESLDENPMIGPSAATLIRMGAKDSYLIVHAGEGWRLLTSTIL 398
Query: 142 HGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGA 201
H G+ H NML+L +G +E G+I +++ S GG +LSA+F+ I+VGASG
Sbjct: 399 HAGLVHYFINMLALWFVGGAIEMSHGWISAMIIFSSSAIGGIILSAIFLPEFITVGASGG 458
Query: 202 LFGLLGSMLSELITNWTIYTN--------KHFLTLVVI-----IAINLAVGILPHVDNFA 248
+FG +G+ L+++I NW + + KH T+VV+ IA+N +G+ P+VDNF
Sbjct: 459 IFGFIGACLADIIMNWKLLFDGLLDENGKKHQHTMVVVVLLFDIALNSIIGLTPYVDNFT 518
Query: 249 HIGGFISGFLLGFVFLIR--PQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
H+GG GFL G + R F +E+ + + + R +++ +V
Sbjct: 519 HLGGMAYGFLCGLSTIERLSKDFFGLEESWMVRAKNFCVR-----------FFGIIVTVV 567
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
+ + ++L+ G C+ C +LSCVP W ++
Sbjct: 568 FICVTAIILMGGDGVTTPCTNCSWLSCVPFPPWQSQS 604
>gi|223998534|ref|XP_002288940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976048|gb|EED94376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 239
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 141/248 (56%), Gaps = 10/248 (4%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
L + +P NP++GPS+ TL KMGA S +V++ + +RL + LH G+ H NM+
Sbjct: 1 LNGWKVEPLSVNPMIGPSAETLIKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYFLNMM 60
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
+L IG +EQ GF ++++I GG+++SA+F+ ISVGASG +FGL+G+ ++++
Sbjct: 61 ALWFIGKAVEQCHGFAAAAIIFVIPAVGGTIMSAIFLPEYISVGASGGIFGLIGACIADI 120
Query: 214 ITNWTIYTNKHFLT-LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWV 272
NW++ +KH L L+ I IN VG+ P VDNF H+GG + GFL G + R +
Sbjct: 121 CINWSLLFSKHVLLWLLFDIVINCLVGLTPFVDNFTHLGGMVYGFLCGLSTIER-----L 175
Query: 273 EQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLS 332
+ + SR + + + I+S+VL++V L L+ CS C Y+S
Sbjct: 176 STDFFGIATTFCSRLRNVIVRFSGLILSVVLIMVTTAL----LVESDGGASPCSGCRYVS 231
Query: 333 CVPTSRWS 340
CVP W+
Sbjct: 232 CVPFPPWA 239
>gi|440793889|gb|ELR15060.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+P NP GP + TL +GA DV K+V+ ++ WR T +LH G+ H+ N++ L
Sbjct: 203 FEPISVNPFFGPDAETLIALGAKDVPKIVEDYEVWRFFTPIFLHAGLIHLALNLIFQLQC 262
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
LE++ GF+RVGL+YI+SGFGG+L S+LF+ ISVGASGALFGL+G + + NW+
Sbjct: 263 -FMLERQMGFVRVGLVYIVSGFGGNLASSLFLPRLISVGASGALFGLVGMIFVVIFRNWS 321
Query: 219 IYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ + ++ + L +++AI+L +G+LP+VDNFAH+GG ++G + +
Sbjct: 322 LVVSPCRNLVVLCIMVAISLFLGLLPNVDNFAHVGGLVTGLVASLI 367
>gi|328866134|gb|EGG14520.1| beta-lactamase family protein [Dictyostelium fasciculatum]
Length = 490
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 15 NSKGGGGSGSGNTVHPVEEMDRPQGVSA-----------PPPAVYGEIKHSKKWVTWLIP 63
S G GG GS HP + + +G+S+ PPPA +++ + I
Sbjct: 190 TSMGKGGKGS----HPSRQSNLSRGISSYALKNEADGMGPPPAP------PQQYTPYFII 239
Query: 64 CFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDV 123
+ + + + + +N F+P+K NP GPS+ TL +GA
Sbjct: 240 LVSIIDTCLLIWEIVLNG----------------GFEPWKTNPWFGPSASTLLNVGA-KY 282
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ ++ + WR + +LH G+FH+L N+ + L IG++LE+ +G R+ +Y++ G G+
Sbjct: 283 APLILYGEWWRFFSPIFLHVGIFHLLMNLGTQLRIGMQLERSYGAHRIVPIYLLCGVMGN 342
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGI- 240
L S++F+ ++ VGASG++FG LG +L++L NW+ + + +LV I + AVG+
Sbjct: 343 LCSSIFLPLSVQVGASGSIFGFLGVLLADLARNWSALASPYLNCCSLVFTIITSFAVGLF 402
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVS 300
LP VDNFAH GGF+ G L G +FL +L+ +K + + L I++
Sbjct: 403 LPGVDNFAHFGGFVMGILTGLIFL-----------------PSLTPKKAVGKRLCLIIIA 445
Query: 301 LVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+ + + V+ R +D D C C Y++C+ W
Sbjct: 446 IPITVAAFIALFVVFYRQIDTKDWCPGCKYITCLEVLPW 484
>gi|357453409|ref|XP_003596981.1| Membrane protein [Medicago truncatula]
gi|355486029|gb|AES67232.1| Membrane protein [Medicago truncatula]
Length = 220
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 134/264 (50%), Gaps = 55/264 (20%)
Query: 77 MYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRL 135
MY NCP + SC+A FLG SFQP +NPLLG S +TL KMG + K H
Sbjct: 1 MYEYNCPSIAPHSCLASFLGILSFQPITQNPLLGSSPLTLVKMGTMYFKKSDRLHH---- 56
Query: 136 ITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNIS 195
++FG++R+ +L+ +SG G SL SALFI +++S
Sbjct: 57 ----------------------------KKFGYVRIEILHTMSGMGSSLFSALFIPTSVS 88
Query: 196 VGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLA-VGILPHVDNFAHIGGFI 254
VG SGA+ GL+G LS+LI ++ NK TL+ I I V I+ +NF IGG I
Sbjct: 89 VGVSGAIMGLVGGTLSDLI----MHPNKSIWTLIGAIIIRSGLVLIISQANNFGIIGGLI 144
Query: 255 SGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVM 314
+ LLG+V LI + +F Q L + S VL+ + L G+V+
Sbjct: 145 TEILLGYVLLISRK-----------------HSRFAPCQQALRVNSSVLLTIRLMGGMVL 187
Query: 315 LLRGVDANDHCSWCHYLSCVPTSR 338
L+GV +DHCSW HYL CVP R
Sbjct: 188 FLKGVAMSDHCSWYHYLRCVPIKR 211
>gi|219126391|ref|XP_002183442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405198|gb|EEC45142.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 137/258 (53%), Gaps = 27/258 (10%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
L + F+P + NP+ GPS+ TL KMGAL + D+ + +R+ LH G+ H + NML
Sbjct: 7 LNDWRFEPIRSNPMFGPSAETLIKMGALYAPYIHDEQEWFRIFVPIVLHAGIIHYVINML 66
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
++ +IG +E+ G+++ L+++IS GG++ SAL + S ISVGASG +FGLLG L+++
Sbjct: 67 AIGLIGRSVERVHGWLKTALIFLISSVGGNIASALLMPSAISVGASGGIFGLLGLCLADV 126
Query: 214 ITNWTIYTNKH------------FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
NW + + L+ +A+N+++G+ P++DNFAH+GGF+ GF G
Sbjct: 127 CANWHVIQASRDDPSYSFPIRSVVVWLIFEVALNVSIGLTPYIDNFAHMGGFLYGFTFGL 186
Query: 262 VFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ----CILWIVSLVLVIVGLTLGLVMLLR 317
+ R L G + + + ++ + V +++ + +
Sbjct: 187 AIVQR-----------LGGKAFYPKMEIQVHRIRKTAYRFCGLTVTLLLLALTSWKLWIN 235
Query: 318 GVDANDHCSWCHYLSCVP 335
D CSWC YLSC P
Sbjct: 236 DGDDPSPCSWCRYLSCAP 253
>gi|397602203|gb|EJK58107.1| hypothetical protein THAOC_21791 [Thalassiosira oceanica]
Length = 618
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 15/196 (7%)
Query: 86 SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGV 145
+V V+ +L + +P NP++GPS+ TL KMGA S +V++ + +RL + LH G+
Sbjct: 308 AVLVVSFWLNGWEVEPLSVNPMIGPSAETLLKMGAKQTSLIVNQGEWYRLFSPMVLHAGL 367
Query: 146 FHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGL 205
H L NM++L IG +EQ GF +L+II GG++LSALF+ ISVGASG +FGL
Sbjct: 368 IHYLLNMMALWFIGKAVEQCHGFAAAAILFIIPAVGGTILSALFLPEYISVGASGGIFGL 427
Query: 206 LGSMLSELITNWTIYTNKH---------------FLTLVVIIAINLAVGILPHVDNFAHI 250
+G+ +++++ NW + +KH + L+ I IN VG+ P VDNF H+
Sbjct: 428 IGACVADILINWRLLFSKHVNSTKDGTRFRHIKVLMYLLFDIVINCLVGLTPFVDNFTHL 487
Query: 251 GGFISGFLLGFVFLIR 266
GG + GF+ G + R
Sbjct: 488 GGMVYGFMCGLSTIER 503
>gi|297719639|ref|NP_001172181.1| Os01g0147300 [Oryza sativa Japonica Group]
gi|255672873|dbj|BAH90911.1| Os01g0147300 [Oryza sativa Japonica Group]
Length = 121
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 96/119 (80%), Gaps = 3/119 (2%)
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAH 249
SNISVGASGALFGLLGSMLSELITNWTIY NK LTLV+II INLAVGILPHVDNFAH
Sbjct: 3 SNISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAH 62
Query: 250 IGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS-ALSRRKFMTYQCILWIVSLVLVIVG 307
+GGF SGF LGFV L+RPQFG++ Q+ + G ++ K+ TYQ ILW+++ +++I G
Sbjct: 63 LGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLILISG 121
>gi|390343899|ref|XP_003725988.1| PREDICTED: inactive rhomboid protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 888
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q +RL +LH G+FH + + + + I LE+ G+ R+ ++YI SG GG+L SA+
Sbjct: 675 DQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSAIL 734
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNF 247
I VG +GA FGLL ++ E+ NW I N K L L+ II + A+G+LP +DNF
Sbjct: 735 IPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLPWIDNF 794
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
AH+GGFI G L F+FL FG ++ +R++ I +V +VL++
Sbjct: 795 AHLGGFICGIFLSFIFLPYICFGEFDR----------NRKR------IQMVVCIVLLVGF 838
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
TLG V+ + CSWC YL+CVP + C
Sbjct: 839 FTLGFVLFY--IRPITECSWCQYLNCVPITEDFC 870
>gi|390343897|ref|XP_783490.3| PREDICTED: inactive rhomboid protein 1-like isoform 2
[Strongylocentrotus purpuratus]
Length = 887
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q +RL +LH G+FH + + + + I LE+ G+ R+ ++YI SG GG+L SA+
Sbjct: 674 DQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSAIL 733
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNF 247
I VG +GA FGLL ++ E+ NW I N K L L+ II + A+G+LP +DNF
Sbjct: 734 IPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLPWIDNF 793
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
AH+GGFI G L F+FL FG ++ +R++ I +V +VL++
Sbjct: 794 AHLGGFICGIFLSFIFLPYICFGEFDR----------NRKR------IQMVVCIVLLVGF 837
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
TLG V+ + CSWC YL+CVP + C
Sbjct: 838 FTLGFVLFY--IRPITECSWCQYLNCVPITEDFC 869
>gi|440797932|gb|ELR19006.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 49/301 (16%)
Query: 41 SAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQ 100
S+P PA+ + K W +++ A+IA ++ + N +
Sbjct: 200 SSPAPAL---VAKPKYWPVFIL-LVTAADIAGLILELAWNG----------------GVE 239
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
F++NP GP+S TL+ +GA +++K++ WR T +LH G+ H+L N+L +G
Sbjct: 240 DFQDNPFFGPTSETLKTLGAKWTLAILEKNEAWRFFTAMFLHVGIVHLLINILR---VGW 296
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
LE++ GF R+G +YI+SGF G+L S +F+ + I+VGASGA FGL G ++++LI NW I
Sbjct: 297 TLERQIGFWRIGPIYILSGFAGNLASCIFLPNTITVGASGAAFGLAGVLVADLILNWGIV 356
Query: 221 TNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG 280
L + ++ P +DNFAHIGG + GFL G V L
Sbjct: 357 GLALALAVGLL----------PGLDNFAHIGGLVQGFLAGLVL--------------LPS 392
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDH--CSWCHYLSCVPTSR 338
+A + + + ++ ++ + + L +GLV++ V+ ND C C + C+P
Sbjct: 393 LAARVKHCYRLLRWLIILLIPPINALLLAIGLVVVYYNVNPNDPTWCDVCTTIDCIPVLS 452
Query: 339 W 339
W
Sbjct: 453 W 453
>gi|281203068|gb|EFA77269.1| mitochondrial substrate carrier family protein [Polysphondylium
pallidum PN500]
Length = 800
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 137/247 (55%), Gaps = 22/247 (8%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+P+K NP GPS+ L GA + + + WR + +LH G+FH+L N+++ + +
Sbjct: 571 FEPWKTNPWFGPSATVLLNAGA-KYTPAMLAGEWWRFFSPIFLHVGIFHLLMNLMTQVRV 629
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G++LE+ +G R+ +Y++ G G+L SA+F+ ++ GASGA+FG LG ++++L NW+
Sbjct: 630 GMQLERAYGAHRIVPIYLLCGVMGNLCSAIFLPQSVQAGASGAIFGFLGVLVTDLFRNWS 689
Query: 219 IYTNKHF--LTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
+ + +L+ I I+ AVG+ LP VDNFAH GGF+ G + +FL
Sbjct: 690 LLASPFMNCCSLMFTIIISFAVGLFLPGVDNFAHFGGFVMGIMSSLIFL----------- 738
Query: 276 YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+L+ ++ + + L ++++ + + V+ R ++ + C C Y++C+
Sbjct: 739 ------PSLTPKRAIGKRVCLILIAIPITVATFIALFVVFYRQIETSSWCPGCKYITCLQ 792
Query: 336 TSRWSCR 342
W C+
Sbjct: 793 FLSW-CK 798
>gi|219110511|ref|XP_002177007.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411542|gb|EEC51470.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 23/261 (8%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
L + F P NPL GPS+ L GA + +VD Q +R+ T +LH G+ H NML
Sbjct: 7 LNGWKFAPLDVNPLFGPSAQALLDAGARQTALIVDDGQWFRIFTPIFLHAGLVHYGINML 66
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
+ IG +E+ G I +L+ I G GG++L A+F+ +SVGASG +FGL+G L+++
Sbjct: 67 AFWFIGGAIEETHGIINTIVLFFIPGIGGNILGAIFLPQYVSVGASGGIFGLIGGCLADI 126
Query: 214 ITNWTIYTNKHF----LT----------LVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
NW I K + LT LV+ I IN+ +G+ P++DNF H+GG + G L
Sbjct: 127 FLNWNILFIKEYEDDTLTWRKNAVAIAWLVLDIVINVVLGLTPYIDNFTHLGGLVYGLLC 186
Query: 260 GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV 319
GF +I P A+ + + + I+ + L+L + + + ++L
Sbjct: 187 GFS-MIEP--------LAVGFFGVHTSPLGKLRKIIVRFMGLILSVFLIVITTIVLATSD 237
Query: 320 DANDHCSWCHYLSCVPTSRWS 340
+ C C Y+SCVP W
Sbjct: 238 VGENPCQGCRYISCVPFPWWK 258
>gi|255586757|ref|XP_002533998.1| conserved hypothetical protein [Ricinus communis]
gi|223526009|gb|EEF28387.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Query: 26 NTVHPVEEMDRPQ-GVSAPPPAVYGEIKH-SKKWVTWLIPCFVVANIAMFVITMYVNNCP 83
N VHPVE PQ S P VY ++KH SKKW W+IP FV+ANI MFVITMYVNNCP
Sbjct: 24 NAVHPVEIDTPPQLPSSTQSPLVYTQVKHHSKKWKPWIIPSFVIANIVMFVITMYVNNCP 83
Query: 84 KNSVSCVARFLGRFSFQPFKENPLLGPSSVT 114
KNSVSCVA FLGRFSFQPFKENPLLGPSS T
Sbjct: 84 KNSVSCVASFLGRFSFQPFKENPLLGPSSNT 114
>gi|219110513|ref|XP_002177008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411543|gb|EEC51471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 570
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 138/270 (51%), Gaps = 34/270 (12%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
L + F P NPL+GPSS L +GA S ++++ Q +R++T +LH G+ H L NML
Sbjct: 246 LSGWRFAPLNINPLIGPSSEQLIDLGARQTSLILEEGQWFRIVTPIFLHAGIVHYLTNML 305
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
+ IG +E+ G +L+ I G GG++L A F+ ISVGASG FG++G +++
Sbjct: 306 AFWFIGGAIEEAHGIATAIVLFFIPGVGGNILGATFLPQYISVGASGGTFGMIGGYFADI 365
Query: 214 ITNWTIYTNKHFLTLVV---------------IIAINLAVGILPHVDNFAHIGGFISGFL 258
+ NW I ++ V+ IIA+ L +G+ P +DNF H+G G L
Sbjct: 366 VLNWNILCSRDHDEDVLNWRKNIAAIARLAIGIIAL-LVLGVTPFIDNFTHLGALCYGLL 424
Query: 259 LGFVFLIRPQFGWVEQRYALSG-YSALSRRKF--MTYQCILWIVSLVLVIVGLTLGLVML 315
G +F I P L G L RK + ++ I IVS+ L+++ ++
Sbjct: 425 CG-LFAIEP--------VPLEGSIVRLPSRKMSDLLFRQIGAIVSVFLLVI-----TSVV 470
Query: 316 LRGVDANDH-CSWCHYLSCVPTSRWSCRTE 344
L ++ +D C C YLSCVP W+ E
Sbjct: 471 LNSMNVDDSPCHGCQYLSCVPFPWWTEADE 500
>gi|260943073|ref|XP_002615835.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
gi|238851125|gb|EEQ40589.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
Length = 596
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 34/295 (11%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G +V Q +R++T +LH G HI NML L +G +E++ G+++ G++Y+ S
Sbjct: 259 GVREVDGEFIPDQWYRVVTPIFLHAGFLHIAFNMLLQLTMGAAVERQIGWLKFGVIYMAS 318
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHF----LTLV 229
G G LL A F I S GASGALFG++ + + I N +Y K + +V
Sbjct: 319 GIAGFLLGANFSPDGIASTGASGALFGIIATNMLLFIFSGRKNTNMYGTKRYGLFMAVMV 378
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYA-----------L 278
+ ++ A+G+LP +DNF+HIGGF G LL V L P +V+ Y L
Sbjct: 379 FEVLVSFALGLLPGLDNFSHIGGFCMGLLLSVVLLQDPSHVYVDGVYTYEPDTRTWQLFL 438
Query: 279 SGYSALSR-RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV------DANDHCSWCHYL 331
+ ++ +++ + ++ +W+V V+ + L +L R + D + CSWC Y+
Sbjct: 439 NNWNPMNKWHDKVAWKATVWMVLRVICLTLAILFFALLFRNLYSKGMRDEGNKCSWCKYI 498
Query: 332 SCVPTSRW------SCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYI-LSNPSSSQ 379
+C+P W + TEPA + + + + L+ + S L ++NP++ +
Sbjct: 499 NCIPVHDWCDQGQVTVTTEPATPTASSNPSPLSTLVIPSADSTLPASINNPNNKR 553
>gi|320163557|gb|EFW40456.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1087
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 29/229 (12%)
Query: 128 DKHQGWRLITCNWLHGGVFH-ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
D Q +R I+ +LH G+ H I + V+G ++E+ G++R L++ ISG GG ++S
Sbjct: 883 DPAQWYRFISPIFLHVGIIHFIFVAIFENSVVG-QVERSAGWLRTALIFFISGIGGDIIS 941
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
A+F+ + +VG +GALFG LG + EL +W + + L++++ I L +G+LP V
Sbjct: 942 AIFVPNQPTVGGTGALFGFLGVLFVELFQSWQLCRRPVVELIKLILLVVIALVIGLLPWV 1001
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
DN+AHIGGF G + G +FL FG +QR R++ IL +V + L+
Sbjct: 1002 DNWAHIGGFFFGVVAGIIFLPYIVFGKWDQR----------RKR------ILLVVCIPLL 1045
Query: 305 IVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQD 353
I+ LV+ ++ + CSWC Y CVP + P FC T+QD
Sbjct: 1046 IMMFIASLVVFY-ALNVPNFCSWCRYADCVPFT-------PDFC-TSQD 1085
>gi|448114817|ref|XP_004202673.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359383541|emb|CCE79457.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 524
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 122/246 (49%), Gaps = 25/246 (10%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G + HQ +R+IT +LH G HI+ N+L +G +E+ G I+ L+YI S
Sbjct: 265 GIPEADSKYKPHQWYRIITPIFLHAGFIHIIFNLLLQTTMGATIERHIGLIKYFLIYIPS 324
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKH---FLT-LV 229
G G LL A F I S GASGALFG+L + L I N IY K FLT LV
Sbjct: 325 GIAGFLLGANFSPDGISSTGASGALFGILATDLILFIYCGRKNTNIYGTKKFGLFLTFLV 384
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR-- 287
I ++ +G+LP +DNF+HIGGF G L V + P F +V+ + + ++
Sbjct: 385 AEIIVSFVLGLLPGMDNFSHIGGFAMGILTSVVLIPDPFFVYVDGIIIYNAHDNTLQQFL 444
Query: 288 ----KFMTYQ----------CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSC 333
F Y+ C++ V LVL I+ + L + N+HCSWC Y++C
Sbjct: 445 NNWNPFYNYEDKIPYRFYLWCLVRTVCLVLAILFIALLVKNFYSSDSPNEHCSWCKYINC 504
Query: 334 VPTSRW 339
+P W
Sbjct: 505 IPVHGW 510
>gi|397645545|gb|EJK76880.1| hypothetical protein THAOC_01334 [Thalassiosira oceanica]
Length = 326
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 143/271 (52%), Gaps = 35/271 (12%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++GPS+ TL +GA D +V + + WRL+T LH G+ H NM +L + +E
Sbjct: 1 MIGPSAETLVALGAKDSFLIVVEQEVWRLVTSGVLHAGLIHYFINMFALFYVAKAVESVH 60
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN---- 222
GF V L++IS GG++LSA+F+ I+VGASG + GL+G+ LS++I NW + N
Sbjct: 61 GFWAVSTLFVISSTGGTILSAIFLPQYITVGASGGILGLIGACLSDIILNWNLLFNDFVN 120
Query: 223 ----------KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF--VFLIRPQFG 270
K + L++ + +N+ +G+ P VDN++H+GG + GFL G + ++ P+F
Sbjct: 121 PERRSRFAHAKVLVVLLLDVVVNIIIGMTPFVDNWSHVGGMMYGFLCGLSTIHMVSPRFF 180
Query: 271 WVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHY 330
E+R + + +T + + ++V + G ++L G + C C Y
Sbjct: 181 GDERRS--------HKYRLVTLRSVGFLVG----VAGFISSSIVLFSGDGVTNLCPDCTY 228
Query: 331 LSCVPTSRWSCRTEPAFCSTTQDGNQLNVTC 361
+ +SR + F + Q GN+L V+C
Sbjct: 229 SKSIVSSRCT------FQTPNQSGNRL-VSC 252
>gi|432868050|ref|XP_004071386.1| PREDICTED: inactive rhomboid protein 1-like [Oryzias latipes]
Length = 860
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L +++ + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 657 QFYRLWLSLFLHAGILHCLVSVVFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 716
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F+ L+ ++ G+LP +DNFA
Sbjct: 717 PYRAEVGPAGSQFGILACLFVELFQSWQILAEPWRAFIKLLCVVIFLFIFGLLPWIDNFA 776
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ +LV VGL
Sbjct: 777 HISGFISGFFLSFAFLPYISFGRMD-----------------LYRKRCQIIVFLLVFVGL 819
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 820 FSGLVVLFYVYPIK--CDWCEFLTCIPFTDKFC 850
>gi|301623881|ref|XP_002941242.1| PREDICTED: rhomboid family member 1-like [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L ++ + I LE+ G+ R+ ++YI+SG G+L SA+F+
Sbjct: 652 QVYRLWLSLFLHAGVLHCLVSVCFQMTILRDLEKLAGWHRISIIYILSGITGNLTSAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLFAVVIFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H GF+SGF L F FL FG KF Y+ I+ +L+ GL
Sbjct: 772 HFAGFVSGFFLSFAFLPYISFG-----------------KFDMYRKRCQIIIFLLIFFGL 814
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC YL+C+P + C
Sbjct: 815 FSGLVVLFYVYPIK--CEWCEYLTCIPFTDKFC 845
>gi|448112251|ref|XP_004202049.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359465038|emb|CCE88743.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 122/235 (51%), Gaps = 25/235 (10%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
HQ +R++T +LH G HI+ N+L +G +E+ GFI+ L+Y+ SG G LL + F
Sbjct: 331 HQWYRIVTPIFLHAGFIHIIFNLLLQTTMGATIERHIGFIKYFLIYMPSGIAGFLLGSNF 390
Query: 190 IQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKH---FLT-LVVIIAINLAVGI 240
I S GASGALFG+L + L I N IY K FLT LV I I+ +G+
Sbjct: 391 SPDGIASTGASGALFGILAADLIMFIYCGRKNTNIYGTKKFGLFLTFLVAEIIISFVLGL 450
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR------KFMTYQ- 293
LP +DNF+HIGGF G L V + P F +V+ + + +++ F Y+
Sbjct: 451 LPGMDNFSHIGGFAMGILTSVVLIPDPFFIYVDGIITYNAHDNTAQQFLNNWNPFYHYED 510
Query: 294 ---------CILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
C++ IV LVL I+ + L L N HCSWC Y++C+P W
Sbjct: 511 KIPYRFYLWCVVRIVCLVLAILFIALLLKNFYSSDSPNQHCSWCKYINCIPVHGW 565
>gi|345564498|gb|EGX47460.1| hypothetical protein AOL_s00083g396 [Arthrobotrys oligospora ATCC
24927]
Length = 482
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 128/260 (49%), Gaps = 34/260 (13%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL ++ +LQ++ D Q WR I ++H G+ HI N+L L +G +E+
Sbjct: 213 NPL---AACSLQQLCGFQDFSTPD--QWWRFILPMFMHAGLIHIAFNLLIQLRLGTDMER 267
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTN- 222
E G IR ++YI SG G +L F Q S GASGALFG+L +L +L W +
Sbjct: 268 EIGIIRFAIVYISSGIFGFVLGGNFAPQGLASTGASGALFGILALVLLDLFYTWKQRESP 327
Query: 223 -KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRP-----QFGWVEQRY 276
K + L++ AI+ +G+LP VDNFAHIGGF+ G LG F+ P + G E
Sbjct: 328 VKDLIFLIIDFAISFVLGLLPGVDNFAHIGGFLMGLALGLAFMRSPPALQSKLGKGESYN 387
Query: 277 ALS-------GYSALSR------RKFMTYQCILWIVS---LVLVIVGLTLGLVMLLRGVD 320
++S G L R R + + W++ L L I+ TL LLR
Sbjct: 388 SMSSAAIQNQGLRRLLRDPVGFFRGRNPFWWVWWLLRAGMLALAIISFTL----LLRNFY 443
Query: 321 -ANDHCSWCHYLSCVPTSRW 339
N C WC Y +C+P S W
Sbjct: 444 IYNGECKWCRYFTCLPVSNW 463
>gi|118098129|ref|XP_414944.2| PREDICTED: inactive rhomboid protein 1 [Gallus gallus]
Length = 853
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 650 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 709
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 710 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 769
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG KF Y+ I+ L+ + L
Sbjct: 770 HISGFISGFFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLIFIAL 812
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 813 FSGLVILFYFYPIK--CEWCEFLTCIPFTDKFC 843
>gi|224069971|ref|XP_002196233.1| PREDICTED: inactive rhomboid protein 1 [Taeniopygia guttata]
Length = 857
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG KF Y+ I+ L+ + L
Sbjct: 774 HISGFISGFFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLIFIAL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 817 FSGLVILFYFYPIK--CEWCEFLTCIPFTDKFC 847
>gi|326929278|ref|XP_003210794.1| PREDICTED: rhomboid family member 1-like [Meleagris gallopavo]
Length = 769
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 566 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 625
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 626 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 685
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG KF Y+ I+ L+ + L
Sbjct: 686 HISGFISGFFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLIFIAL 728
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
GLV+L C WC +L+C+P + C
Sbjct: 729 FSGLVILFYFYPIK--CEWCEFLTCIPFTDKFCE 760
>gi|357448921|ref|XP_003594736.1| Rhomboid family member [Medicago truncatula]
gi|355483784|gb|AES64987.1| Rhomboid family member [Medicago truncatula]
Length = 190
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 94/144 (65%), Gaps = 9/144 (6%)
Query: 65 FVVANIAMFVITMYVNNCPKNSV-SCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDV 123
FVVAN +F++TMY NNCP + SC+A L +FSF+ K+NPLL KMGA+
Sbjct: 54 FVVANSVIFILTMYENNCPSIAPHSCLASLLDKFSFESIKQNPLL-------VKMGAMYF 106
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+K +RL T WLH G +L NM ++L GI LE+++G +++ +L+ ISG GGS
Sbjct: 107 TKSDRLQHIYRLFTSLWLHAGAVDLLINMFNILYYGISLERKYGSVQIAILHNISGIGGS 166
Query: 184 LLSALF-IQSNISVGASGALFGLL 206
L SALF I +N+SVGASGA+ L+
Sbjct: 167 LFSALFIIPANVSVGASGAIMSLV 190
>gi|348509157|ref|XP_003442118.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 858
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 714
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL W I + F L+ ++ A G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQCWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 774
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ +LV VGL
Sbjct: 775 HISGFISGFFLSFAFLPYVSFGRMD-----------------MYRKRCQIIIFLLVFVGL 817
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC L+C+P + C
Sbjct: 818 FSGLVVLFYVYPIK--CEWCELLTCIPFTDKFC 848
>gi|50426743|ref|XP_461969.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
gi|49657639|emb|CAG90439.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
Length = 610
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 129/244 (52%), Gaps = 29/244 (11%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
V HQ +R+IT +LH G HIL N+L + +G +E+ GFI+ ++Y++ G G
Sbjct: 281 DDVYKPHQWYRVITPMFLHAGFLHILFNLLLQVTMGASIERSIGFIKYAIIYLMCGISGF 340
Query: 184 LLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHF----LTLVVIIAI 234
LL A F + I S GASGALFG++ + + + N IY K + +++ I I
Sbjct: 341 LLGANFSPNGIASTGASGALFGVVATNIIMFVYCGKKNTNIYGTKKYGLFIFIMIMEIVI 400
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRY-----A 277
+L +G+LP +DNF+HIGGF G L+ + L P +V+ Q++
Sbjct: 401 SLVLGLLPGMDNFSHIGGFAMGILMAILLLPDPFLVYVDGIITYHARDDTMQQFRNNWNP 460
Query: 278 LSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDA--NDHCSWCHYLSCVP 335
+ + +F + C + +VSLVL IV + L + G + +++CSWC Y++C+P
Sbjct: 461 IYNWEDKIPSRFYIW-CGIRVVSLVLAIVYIALLVKNFFNGGENPIDNNCSWCKYINCLP 519
Query: 336 TSRW 339
+ W
Sbjct: 520 VNGW 523
>gi|395515582|ref|XP_003761980.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Sarcophilus harrisii]
Length = 858
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 714
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 774
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG KF Y+ I+ ++ +GL
Sbjct: 775 HISGFISGFFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQIIFLGL 817
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 818 LSGLVILFYFXPIR--CEWCEFLTCIPFTDKFC 848
>gi|50345116|ref|NP_001002228.1| inactive rhomboid protein 1 [Danio rerio]
gi|82184057|sp|Q6GMF8.1|RHDF1_DANRE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|49257555|gb|AAH74097.1| Zgc:91984 [Danio rerio]
Length = 857
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + ELI +W I + F L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ ++V +GL
Sbjct: 774 HISGFISGFFLSFAFLPYISFGRLD-----------------MYRKRCQIIIFLVVFLGL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC L+C+P + C
Sbjct: 817 FAGLVVLFYVHPIK--CEWCELLTCIPFTDKFC 847
>gi|291002015|ref|XP_002683574.1| predicted protein [Naegleria gruberi]
gi|284097203|gb|EFC50830.1| predicted protein [Naegleria gruberi]
Length = 168
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKH-QGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
NPL+GP TL ++GA + ++ + Q +RL+T +LHGG+ H+ NM+ + + + LE
Sbjct: 1 NPLIGPPEATLVQLGAKQGTLIISPNWQVYRLLTPIFLHGGIVHLCLNMMWQMSVMLPLE 60
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN- 222
+ +G I V +Y+ISG GG+LLSALF+ ++VGAS +LFG+LG + ++L NW +
Sbjct: 61 RHWGCIFVCFIYLISGVGGNLLSALFLPEIVTVGASSSLFGILGGIYADLWMNWRYMPSP 120
Query: 223 -KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIR 266
+ F+ + + + + VG++P +DNFAH+GG + GFL +F+ R
Sbjct: 121 KRDFILITIQVVAQVIVGLIPWIDNFAHVGGLLVGFLSTMIFIPR 165
>gi|345312945|ref|XP_003429322.1| PREDICTED: inactive rhomboid protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 599
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 396 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRISIIYLLSGVTGNLASAIFL 455
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 456 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 515
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG +F Y+ I+ LV +GL
Sbjct: 516 HISGFISGFFLSFAFLPYISFG-----------------RFDLYRKRCQIIVFQLVFLGL 558
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLN 358
GLV+L C+WC +L+C+P + FC + QL+
Sbjct: 559 LAGLVILFYFYPIR--CAWCEFLTCLPFTD-------KFCEKYELDTQLH 599
>gi|119175195|ref|XP_001239866.1| hypothetical protein CIMG_09487 [Coccidioides immitis RS]
gi|392870060|gb|EAS28616.2| DHHC zinc finger membrane protein [Coccidioides immitis RS]
Length = 485
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 20/260 (7%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
++ + +Q +R I +LH G+ HI N+L+ LVIG +E+ G+ R ++Y SG G
Sbjct: 227 INDKDEPNQWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFG 286
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+ F I S GASG+LFG+L + +L+ W + L +++ +AI+ +G
Sbjct: 287 FVFGGNFAAPGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVLG 346
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKFMTY-- 292
+LP +DNF+HIGGF+ G LG + +R + G ++ G A S +KF+
Sbjct: 347 LLPGLDNFSHIGGFLMGLALGICLMRSPDTLRERIGATTPYMSVDGSPAESAKKFIKEPV 406
Query: 293 -----QCILWIVSLVL---VIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTSRWSCRT 343
+ LW +L +VG+ + ++LL CSWC YLSC+P W C
Sbjct: 407 GFFKGRKPLWWAWWLLRAGALVGILIAFILLLNNFYKYRSECSWCKYLSCLPIKNW-CDV 465
Query: 344 EPAFCSTTQDGNQLNVTCSS 363
+TT N+ + S+
Sbjct: 466 GNIGTTTTSPNNRRGLLVSA 485
>gi|384495876|gb|EIE86367.1| hypothetical protein RO3G_11078 [Rhizopus delemar RA 99-880]
Length = 396
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 20/214 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +RL+ ++H G+ H L NML+ L +G+ LE+ G R LLY+ SG G +LSA+
Sbjct: 194 NQSFRLVLPIFMHAGIIHFLVNMLTHLRLGVDLEKALGTPRYALLYMASGIWGFVLSAML 253
Query: 190 IQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDN 246
Q+ + S G SGALFGL+G M +++ NW I + ++ + L++ I+L +G+LP +DN
Sbjct: 254 SQNLSASTGCSGALFGLIGYMFIDVLVNWKILPHPVRNLMNLLMSTVISLVLGLLPGLDN 313
Query: 247 FAHIGGFISGFLLG-FVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
FAHIGGF G L+G V +RP A R K +T+ IL +V+LVL+I
Sbjct: 314 FAHIGGFTVGILMGMLVAPMRPM--------------ATPRVKIITW--ILRVVALVLLI 357
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
V + + L D + C C YLSC+P S W
Sbjct: 358 VLFVVTIRELYSVYDPSTICPNCKYLSCLPVSNW 391
>gi|291190666|ref|NP_001167164.1| Rhomboid-like protease 4 [Salmo salar]
gi|223648418|gb|ACN10967.1| Rhomboid-like protease 4 [Salmo salar]
Length = 788
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++L + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 585 QFYRLWLSLFLHAGILHCLVSVLFQMTILRDLEKLAGWLRISIIYIVSGITGNLASAIFL 644
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ + G+LP +DNFA
Sbjct: 645 PYRAEVGPAGSQFGILACLFVELFQSWQILERPWRAFTKLLCVVLFLFSFGLLPWIDNFA 704
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISG L F FL FG + Y+ + I +LV +GL
Sbjct: 705 HISGFISGLFLSFAFLPYISFG-----------------RLDMYRKRVQICVFLLVFLGL 747
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GL +L C WC YL+C+P + C
Sbjct: 748 FSGLAVLFYVHPVK--CEWCEYLTCIPLTDKFC 778
>gi|303314767|ref|XP_003067392.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107060|gb|EER25247.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320037727|gb|EFW19664.1| rhomboid family membrane protein [Coccidioides posadasii str.
Silveira]
Length = 485
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 22/264 (8%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G++D + +Q +R I +LH G+ HI N+L+ LVIG +E+ G+ R ++Y S
Sbjct: 225 GSIDDKD--EPNQWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYAS 282
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G + F I S GASG+LFG+L + +L+ W + L +++ +AI+
Sbjct: 283 GIFGFVFGGNFAAPGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAIS 342
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKFM 290
+G+LP +DNF+HIGGF+ G LG + +R + G ++ G A S +KF+
Sbjct: 343 FVLGLLPGLDNFSHIGGFLMGLALGICLMRSPDTLRERIGSTTPYMSVDGSPAESAKKFI 402
Query: 291 TY-------QCILWIVSLVL---VIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTSRW 339
+ LW +L +VG+ + ++LL CSWC YLSC+P W
Sbjct: 403 KEPVGFFKGRKPLWWAWWLLRAGALVGILIAFILLLNNFYKYRSECSWCKYLSCLPIKNW 462
Query: 340 SCRTEPAFCSTTQDGNQLNVTCSS 363
C +TT N+ + S+
Sbjct: 463 -CDVGNIGTTTTSPNNRRGLLVSA 485
>gi|348585385|ref|XP_003478452.1| PREDICTED: inactive rhomboid protein 1-like [Cavia porcellus]
Length = 856
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISG L F FL FG KF Y+ I+ V +GL
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 816 LAGLVILFYFYPVR--CEWCEFLTCIPFTDKFC 846
>gi|47226109|emb|CAG04483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 626
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 21/212 (9%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RL +LH GV H L +++ + + +E+ G++RV ++Y++SG G+L SA+F+
Sbjct: 426 RLWLSLFLHAGVLHCLVSVVFQMTVLRDIEKLVGWLRVSIIYMLSGITGNLASAIFLPYR 485
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
VG +G+ FG+L + EL +W I + F L+ I + G+LP +DNFAHI
Sbjct: 486 AEVGPAGSQFGILACLFVELFQSWPILERPWRAFAKLLAISTFFFSFGLLPWIDNFAHIC 545
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
GF+SGF L F FL +S R+ Y L I +LV VGL
Sbjct: 546 GFVSGFFLSFAFL-----------------PYISFRRSDMYLKRLQICVFLLVFVGLLSA 588
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
L++L C WC YL+C+P + C T
Sbjct: 589 LLVLFYVYPVK--CEWCEYLTCIPITDMFCET 618
>gi|398408343|ref|XP_003855637.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
gi|339475521|gb|EGP90613.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
Length = 496
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 37/274 (13%)
Query: 85 NSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGG 144
+SVSC L FS +NP +G G+LD D Q WR I +LH G
Sbjct: 212 DSVSCQLSDLCGFSAD---KNPRVG---------GSLDDQPAPD--QWWRFIVPIFLHAG 257
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALF 203
+ HI N+L L +G +E+ G IR +LY +G G +L F + I S G SG+LF
Sbjct: 258 IIHIAFNLLLQLTLGRDVEKLVGSIRFAILYFAAGIFGFVLGGNFAATGIASTGCSGSLF 317
Query: 204 GLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
G+L L +L+ W T+ K + ++V + I A+G+LP +DNF+HIGGF+ G +LG
Sbjct: 318 GILAITLLDLLYTWKERTSPVKDLMFILVDMVIAFALGLLPGLDNFSHIGGFLMGLVLGV 377
Query: 262 VFLIRP-QFGWVEQRYALSGYSALSRRK----------------FMTYQCI--LWIVSLV 302
L P + + Y++++R++ F + + LWI
Sbjct: 378 CLLRSPSEIARRKDDVDDVAYTSVARQEKRGDGLRRFAKSPLGFFQKRRGVWWLWIAIRG 437
Query: 303 LVIVGLTLGLVMLLRGVDA-NDHCSWCHYLSCVP 335
++G + ++LL+ + CSWC YLSC+P
Sbjct: 438 AALLGALIAFILLLKNFYVWKNTCSWCKYLSCLP 471
>gi|308198230|ref|XP_001386926.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
gi|149388924|gb|EAZ62903.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+IT +LH G HI+ N+L + +G +E+ G ++ ++Y+ SG G LL A F
Sbjct: 298 QWYRVITPIFLHAGFLHIIFNLLLQITMGSSIERHIGVLKYAIIYLSSGIAGFLLGANFT 357
Query: 191 QSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGIL 241
I S GASGALFG++ + + I N +Y +H++ + I I I+L +G+L
Sbjct: 358 PQGIASTGASGALFGIVATNILLFIYCGRKNTNLYGTRHYVLFICIMVGEIIISLVLGLL 417
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRR------KFMTYQ-- 293
P +DNF+HIGGF G L VFL P F +++ G + + F ++
Sbjct: 418 PGLDNFSHIGGFAMGVLTAVVFLPDPFFVYIDGIITYKGNATTWEQFVNAWNPFYAWEDK 477
Query: 294 --------CILWIVSLVLVIVGLTLGLVMLLRGVDAND-HCSWCHYLSCVPTSRW 339
C +V LVL IV L + + ++ + CSWC Y++C+P + W
Sbjct: 478 IPLRFYIWCGFRVVCLVLAIVYLAMLIKNFFTNTESPESRCSWCKYINCIPVNGW 532
>gi|57088635|ref|XP_547222.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Canis lupus
familiaris]
Length = 856
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W + + F L ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISG L F FL FG KF Y+ I+ +V +GL
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 816 LAGLVILFYFYPVR--CEWCEFLTCIPFTDKFC 846
>gi|241950141|ref|XP_002417793.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641131|emb|CAX45507.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 666
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 140/279 (50%), Gaps = 38/279 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G HI+ N+L + +G +E+ G I+ ++YI SG GG LL A F
Sbjct: 314 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGIIKYAIIYISSGIGGFLLGANFT 373
Query: 191 QSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGIL 241
I S GASGALFG++ + + I N +Y KH+ + I I I+L +G+L
Sbjct: 374 PQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGLL 433
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALSRRKF 289
P +DNF+HIGGF G L V L P + +++ Q++ + S
Sbjct: 434 PGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSIEDK 493
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRG-----VDANDHCSWCHYLSCVPTSRWSCRTE 344
+ + +W V+ +V + + LV+L + +D ++C WC Y +C+P W C
Sbjct: 494 IPSRFYVWCGVRVIALVLMIIYLVLLCKNFFNNDIDRGNNCKWCKYFNCIPVKGW-C--- 549
Query: 345 PAFCSTTQDGNQLNVTCSSNGKSNLYILSNPSSSQIQSL 383
D Q++VT S+N +N ++PSS+ + ++
Sbjct: 550 --------DIGQVSVTSSTNTDTNPNTTASPSSTTVPTM 580
>gi|432952307|ref|XP_004085050.1| PREDICTED: inactive rhomboid protein 1-like, partial [Oryzias
latipes]
Length = 627
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RL +LH G+ H L +M + + LE+ G++R+ ++Y++SG G+L SA+F+
Sbjct: 424 RLWLALFLHAGILHCLVSMFFQMTVLRDLEKLAGWLRISIIYMLSGITGNLASAIFLPYR 483
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
VG +G+ FG+L + EL +W I + F L+ I + G+LP +DNFAHI
Sbjct: 484 AEVGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLPWIDNFAHIC 543
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL--T 309
GF+SGF L F FL Y G+S R++ + I +L+ VGL T
Sbjct: 544 GFVSGFFLSFAFL----------PYISFGHSDAFRKR-------VQICVFLLIFVGLFST 586
Query: 310 LGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
L ++ + + C WC YL+C+P + C
Sbjct: 587 LAVLFYIYPIK----CDWCEYLTCIPITDKLCE 615
>gi|258566790|ref|XP_002584139.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905585|gb|EEP79986.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 489
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 19/236 (8%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + +Q +R I +LH G+ HI N+L+ ++IG +E+ G+ R ++Y SG G
Sbjct: 223 IDDKPEPNQWFRFIIPIFLHAGLIHIGVNLLAQMIIGADMERNIGWWRFAIVYYASGIFG 282
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+ F I S GASG+LFG+L + EL+ W + + LT+++ + I+ +G
Sbjct: 283 FVFGGNFAAPGIASTGASGSLFGILALCVLELLYKWNTISRPVTYLLTMILAVVISFVLG 342
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
+LP +DNF+HIGGF+ G +LG L +R + G +++G + ++F+
Sbjct: 343 LLPGLDNFSHIGGFLMGLVLGVCLLRSPDTLRERIGVSTPYLSVNGAPSRDAKQFIRQPI 402
Query: 295 IL----------WIVSLVLVIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTSRW 339
W + V +VG+ + ++L+ CSWC YLSC+P W
Sbjct: 403 GFFKGRKPLWWGWWLLRVGALVGILVAFILLINNFYKYRSECSWCKYLSCLPIKNW 458
>gi|351711230|gb|EHB14149.1| Rhomboid family member 1 [Heterocephalus glaber]
Length = 857
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 131 QGWRLITCNWLHGG-VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q +RL +LH G + H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F
Sbjct: 653 QFYRLWLSLFLHAGQILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 712
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNF 247
+ VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNF
Sbjct: 713 LPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNF 772
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
AHI GFISG L F FL FG KF Y+ I+ V +G
Sbjct: 773 AHISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLG 815
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L GLV+L C WC +L+C+P + C
Sbjct: 816 LLAGLVILFYFYPVR--CEWCEFLTCIPFTDKFC 847
>gi|326672347|ref|XP_691851.4| PREDICTED: rhomboid family member 1-like [Danio rerio]
Length = 909
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 706 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 765
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L ++ A G+LP +DNFA
Sbjct: 766 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFTKLSCVVLFLFAFGLLPWIDNFA 825
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SGF L F FL FG ++ Y+ L I+ + + VG+
Sbjct: 826 HICGFVSGFFLSFAFLPYISFGRMD-----------------MYRKRLQILVALTLFVGI 868
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
V+L C WC +L+C+P + C
Sbjct: 869 FSSFVVLFYVYPVK--CEWCEFLTCIPLTDKFC 899
>gi|326430143|gb|EGD75713.1| hypothetical protein PTSG_07830 [Salpingoeca sp. ATCC 50818]
Length = 628
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 117/217 (53%), Gaps = 20/217 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +RL T ++H G ++ M G ++E + GF+R L+Y ISG GG+ ++A+F
Sbjct: 429 NQWFRLFTSLFIHAGAIQLVIIMSIQWYAGRQIETQAGFLRTFLVYFISGVGGTTIAAIF 488
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNF 247
+ ++ GA+ A++GLLG +L EL+ W + L LV IIA L VG LP +DN+
Sbjct: 489 SPNLVTTGANPAVYGLLGCVLVELLQTWQLLEKPWLQLLKLVAIIAFLLLVGTLPFLDNW 548
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+H+GGF G + G VFL FG + ++R++ + + C +++G
Sbjct: 549 SHVGGFAFGVVAGIVFLPYITFGEWD----------VARKRLLFFVCF-------PLLIG 591
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTS-RWSCRT 343
+ + + + + CSWC Y++C+P S SC T
Sbjct: 592 MFIAAFVTFYQIQNTNFCSWCDYVNCIPYSPDLSCNT 628
>gi|330924089|ref|XP_003300510.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
gi|311325347|gb|EFQ91395.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 133/276 (48%), Gaps = 36/276 (13%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q WR IT +LH G+ HI NML +G +E+E G +R L+Y +G G +L
Sbjct: 264 EPNQWWRFITPIFLHAGIIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLGG 323
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
+ + SVG SG+LFG+L + +L+ NW+ + K L L++ +AI +G+LP +
Sbjct: 324 NYAPEGLTSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLPGL 383
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ-----FGWVEQRYA------LSGYSALSRRK----- 288
DNF+HIGGF G +LG + PQ G E YA L+ + S+ K
Sbjct: 384 DNFSHIGGFCMGLVLGICIIHSPQSLRARTGMNEPPYATVDTQPLAPTAEESKNKIAAFA 443
Query: 289 -----FMTYQCILWIVSLVLVIVGLT---LGLVMLLRG-VDANDHCSWCHYLSCVPTSRW 339
F + LW VL GL +G V+LLR + + C WC +LSC+P
Sbjct: 444 KQPVGFFKGRKPLWWAWWVLRAGGLVAVFIGFVLLLRNFYEWRNTCGWCKHLSCLPVKTN 503
Query: 340 SCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILSNP 375
+C D LN T +S +N L P
Sbjct: 504 GVN----WC----DMGSLNFTTTSTTPNNKRGLEGP 531
>gi|189207869|ref|XP_001940268.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976361|gb|EDU42987.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 542
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 122/236 (51%), Gaps = 28/236 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q WR IT +LH G+ HI NML +G +E+E G +R L+Y +G G +L
Sbjct: 262 EPNQWWRFITPIFLHAGLIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLGG 321
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
+ + SVG SG+LFG+L + +L+ NW+ + K L L++ +AI +G+LP +
Sbjct: 322 NYAPEGLTSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLPGL 381
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ-----FGWVEQRYA------LSGYSALSRRK----- 288
DNF+HIGGF G +LG + PQ G E YA L+ + S+ K
Sbjct: 382 DNFSHIGGFCMGLVLGICIIHSPQSLRARTGMNEPPYATVDTQPLAPTAEESKTKISAFA 441
Query: 289 -----FMTYQCILWIVSLVLVIVGLT---LGLVMLLRGV-DANDHCSWCHYLSCVP 335
F + LW VL GL +G ++LLR + + CSWC +LSC+P
Sbjct: 442 KQPVGFFKGRKPLWWAWWVLRAGGLVAVFIGFILLLRNFYEWRNTCSWCKHLSCLP 497
>gi|190346548|gb|EDK38656.2| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 27/239 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ Q +R+IT +LH G HI+ N+L + +G +E++ G I+ ++Y++SG GG +L A
Sbjct: 305 EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSGIGGFVLGA 364
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAV 238
F + I S G SGALFG++ + + + N +Y KH++ + I I ++ +
Sbjct: 365 NFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLTEIVVSFVL 424
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL------SRRKFMTY 292
G+LP +DNF+H+GGF G L + L P F +V+ SG ++ + F +
Sbjct: 425 GLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDSIWDEFVNNWNPFYNW 484
Query: 293 QC------ILWI----VSLVLVIVGLTLGLVMLL--RGVDANDHCSWCHYLSCVPTSRW 339
+ +W V LVL ++ + L +V +D + C+WC Y +C+P + W
Sbjct: 485 ESKIPSRVYMWFGVRAVCLVLAVLYMALLIVNFFGKPELDNDKSCAWCKYFNCIPVNGW 543
>gi|344302219|gb|EGW32524.1| hypothetical protein SPAPADRAFT_61590 [Spathaspora passalidarum
NRRL Y-27907]
Length = 555
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 138/313 (44%), Gaps = 71/313 (22%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDV---------------------SKVVDKH----- 130
F QP+ NP+LGPS+ L MGA V S VD +
Sbjct: 129 FQTQPYF-NPMLGPSTYLLINMGARYVPCMHQVLGITNDTTISFPCANSTTVDTYVCNLA 187
Query: 131 ------------------QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
Q +R+ +LH G HI+ N+L + +G +E+ G ++
Sbjct: 188 ELCGLSGIPIEKNAFIPDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGGSIERNIGILKYA 247
Query: 173 LLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLT 227
++YI SG G LL A F I S GASGALFG++ + + + N +Y KH+
Sbjct: 248 IIYIASGIAGFLLGANFTPVGIASTGASGALFGIVATNMILFVYTGKKNTNMYGTKHYTL 307
Query: 228 LVVI----IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE---------- 273
+ I I ++ +G+LP +DNF+HIGGF G L+ VFL P + +V+
Sbjct: 308 FIFIMIGEIVVSFVLGLLPGLDNFSHIGGFAMGILMAIVFLKDPYWVYVDGIIVYRKGRD 367
Query: 274 --QRYALSGYSALSRRKFMTYQCILWI----VSLVLVIVGLTLGLVMLLR-GVDANDHCS 326
Q++ + + + +WI V+ L IV + + + G+D D C
Sbjct: 368 TLQQFIDHWNPMYAIEDKIRTRFYIWIGARVVAFALAIVYFAVLIKNFFKSGIDRGDTCH 427
Query: 327 WCHYLSCVPTSRW 339
WC Y++C+P W
Sbjct: 428 WCKYINCIPVHGW 440
>gi|146418118|ref|XP_001485025.1| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 27/239 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ Q +R+IT +LH G HI+ N+L + +G +E++ G I+ ++Y++SG GG +L A
Sbjct: 305 EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSGIGGFVLGA 364
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAV 238
F + I S G SGALFG++ + + + N +Y KH++ + I I ++ +
Sbjct: 365 NFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLTEIVVSFVL 424
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL------SRRKFMTY 292
G+LP +DNF+H+GGF G L + L P F +V+ SG ++ + F +
Sbjct: 425 GLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDSIWDEFVNNWNPFYNW 484
Query: 293 QC------ILWI----VSLVLVIVGLTLGLVMLL--RGVDANDHCSWCHYLSCVPTSRW 339
+ +W V LVL ++ + L +V +D + C+WC Y +C+P + W
Sbjct: 485 ESKIPSRVYMWFGVRAVCLVLAVLYMALLIVNFFGKPELDNDKSCAWCKYFNCIPVNGW 543
>gi|342874669|gb|EGU76647.1| hypothetical protein FOXB_12836 [Fusarium oxysporum Fo5176]
Length = 572
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 23/239 (9%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D+++ + +Q +R IT ++H G+ HI+ N+L L I +E G +R L+Y+ +G
Sbjct: 320 DINQSPEPNQWYRFITSIFMHAGLIHIIFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIF 379
Query: 182 GSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ + SVGASGALFG++ +L +L+ +W N K L +++ + I +
Sbjct: 380 GNIMGGNYAPPGQPSVGASGALFGIIALVLLDLLYSWKDRRNPVKDLLFIILDMVIAFVL 439
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL------------------IRPQFGWVEQRYALSG 280
G+LP +DNF HIGGF+ G LG L + PQ G + +
Sbjct: 440 GLLPGLDNFVHIGGFLMGLSLGVCVLHSPNSLRRRMGQELSYAAVSPQTGETPPHFFKNP 499
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
RK + + W+V +++ + + +V+L +D C WC YL+C+P + W
Sbjct: 500 VGFFKGRKPLWWA--WWLVRAAFLVMIIVVFIVLLNNFYKYHDTCEWCKYLNCLPINDW 556
>gi|449275966|gb|EMC84691.1| Rhomboid family member 1 [Columba livia]
Length = 774
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 571 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 630
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 631 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 690
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG KF Y+ I+ L+ + L
Sbjct: 691 HISGFISGFFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQLIFIAL 733
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
GLV+L C WC +L+C+P + C
Sbjct: 734 FSGLVILFYFYPIK--CEWCEFLTCIPFTDKFCE 765
>gi|348502086|ref|XP_003438600.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 865
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RL +LH G+ H L ++L + + +E+ G++R+ ++Y++SG G+L SA+F+
Sbjct: 665 RLWLSLFLHAGILHCLVSVLFQMTVLRDIEKLAGWLRISIIYMLSGITGNLASAIFLPYR 724
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
VG +G+ FG+L + EL +W I + F L+ I + G+LP +DNFAHI
Sbjct: 725 AEVGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLPWIDNFAHIC 784
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
GF+SGF L F FL Y G S + R++ I +L+ +GL
Sbjct: 785 GFVSGFFLSFAFLP----------YISFGRSDMYRKRVQ-------ICVFLLIFLGLFSA 827
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L +L C WC YL+C+P + C
Sbjct: 828 LAVLFYIYPVK--CDWCEYLTCIPITDKFC 855
>gi|326435850|gb|EGD81420.1| hypothetical protein PTSG_02140 [Salpingoeca sp. ATCC 50818]
Length = 1498
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 23/206 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G H+ +L + +E+ G++R+ +Y+++G GG L+SA F
Sbjct: 1297 QWYRLYLAMFLHVGFVHLFFVVLMQHSFAVEIEKLAGWLRMFFIYMLAGIGGYLVSANFT 1356
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
+S GAS AL+GLLG + EL +W + + K FL L +I + LAVG+LP++DN++
Sbjct: 1357 PYQVSTGASPALYGLLGCLFVELFQSWQLLESPKKEFLKLFLIAIVALAVGLLPYIDNWS 1416
Query: 249 HIGGFISGFLLGFVFLIRPQFG-WVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
H+GGF G L VFL FG W +R++ + + +V+L+ V
Sbjct: 1417 HLGGFAFGILSSIVFLPYITFGKW-----------DAARKRTLILIALPGLVALITV--- 1462
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSC 333
L +++ R ++ CSWC L+C
Sbjct: 1463 --LSILLATRTIN----CSWCGLLNC 1482
>gi|407927474|gb|EKG20366.1| Peptidase S54 rhomboid [Macrophomina phaseolina MS6]
Length = 557
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 174/395 (44%), Gaps = 91/395 (23%)
Query: 52 KHSKK---WVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
+H+KK W + IP +VV + + I +++ +N+V + + + SF NP++
Sbjct: 167 RHNKKKDGWFSGKIP-WVVYTLTVVQIAVFIGEVIRNAVLTGSPIMIKPSF-----NPMI 220
Query: 109 GPSSVTLQKMGAL----------------------------------------------D 122
GPSS MGA +
Sbjct: 221 GPSSYVYINMGARFVPCMRQMGGGNEITITPDIAFPCPNTTTGASECSLSTLCGMTGIPE 280
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + +Q +R I +LHGG+ HI NML + +G +E+ G IR L+Y +G G
Sbjct: 281 SNGELHPNQWYRFIVPIFLHGGLIHIGFNMLVQVTVGRDMEKLIGSIRFFLVYFAAGIFG 340
Query: 183 SLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++L A + + + SVGASGA+FG++ L +L+ +W N + L +++ + I +G
Sbjct: 341 NVLGANYAPNGSPSVGASGAIFGIIALTLLDLLYHWKERLNPKRELLFIMLDVVIAFVLG 400
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQ-----FGWVEQRYAL----SGYSALSRRKFM 290
+LP +DNFAHIGGFI G LG L PQ G E Y+ L K
Sbjct: 401 LLPGLDNFAHIGGFIMGLGLGISILHSPQALRERIGVDEPPYSAVPNPKQGEGLDNPKAF 460
Query: 291 TYQCI------------LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
T Q I W++ +I+ + +V+L +++ C WC YLSC+P S
Sbjct: 461 TKQPIGFFKGRKPLWWAWWLIRAAFIIIVIVAFIVLLNNFYVSHNTCKWCKYLSCIPVSN 520
Query: 339 WSCRTEPAFCSTTQDGNQLNVTCSSNGKSNLYILS 373
W C D L +T S++ K +L+ L
Sbjct: 521 W-C-----------DMGNLELTNSTSSKRDLFGLE 543
>gi|440634935|gb|ELR04854.1| hypothetical protein GMDG_07079 [Geomyces destructans 20631-21]
Length = 515
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 29/248 (11%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R IT +LH G+ HI N+L + IG +EQ G IR L+Y+ SG G +L F
Sbjct: 257 NQWFRFITPMFLHAGLIHIGFNLLLQVTIGREMEQSIGHIRFALMYLSSGIFGFVLGGNF 316
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDN 246
S I S GASG+LFG++ ML EL+ W+ N + + + I I+ +G+LP +DN
Sbjct: 317 AASGISSTGASGSLFGIIALMLLELLYTWSERPNPWRDLAFVCLDIVISFVLGLLPGLDN 376
Query: 247 FAHIGGFISGFLLGFVFL-----------IRPQFGWVEQRYALSGYSALSR--------- 286
F+HIGGF+ G +G L P + V +R +G S +SR
Sbjct: 377 FSHIGGFLMGLAIGICILHSPTSLTRKVGAEPPYETVGKR--GTGPSEVSRFVKAPLGFF 434
Query: 287 --RKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
RK + + + W++ +I+ L L +V+L CSWC YLSC+P W + E
Sbjct: 435 KARKPLWW--VWWLIRAAALILILVLFIVLLNNFYKYQKECSWCKYLSCLPVKDWCEQGE 492
Query: 345 PAFCSTTQ 352
F S Q
Sbjct: 493 LNFQSKAQ 500
>gi|396485661|ref|XP_003842225.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
gi|312218801|emb|CBX98746.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
Length = 549
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 130/246 (52%), Gaps = 32/246 (13%)
Query: 122 DVSKVVDK----HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
DV+ D+ +Q WR I +LH G+ HI NML L +G +E+E G +R L+Y
Sbjct: 258 DVTDFRDRSREPNQWWRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKEIGPLRFTLVYFA 317
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
+G G +L + + SVGASG+LFG+L L +L+ NW+ + K L L++ +AI
Sbjct: 318 AGIFGFVLGGNYAADGLASVGASGSLFGILALTLLDLLYNWSTRRSPVKDLLFLLLDVAI 377
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYAL----------- 278
+G+LP +DNF+HIGGF+ G +LG L +R + G E YA
Sbjct: 378 AFVLGLLPGLDNFSHIGGFLMGLVLGICLLHSPESLRARTGTDEPPYATVDTQPLAPTAT 437
Query: 279 ---SGYSALSRRK---FMTYQCILWIVSLVLV--IVGLTLGLVMLLRG-VDANDHCSWCH 329
S ++ L++ F + + W LV +V + +G ++LLR + + CSWC
Sbjct: 438 ETKSKFAVLTKSPLGFFKGRKPLWWAWWLVRAGGLVAVFIGFILLLRNFYEWRNTCSWCK 497
Query: 330 YLSCVP 335
+L+C+P
Sbjct: 498 HLTCLP 503
>gi|449551010|gb|EMD41974.1| hypothetical protein CERSUDRAFT_79578 [Ceriporiopsis subvermispora
B]
Length = 460
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 60/282 (21%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGAL---------------------DVSKVVDK------- 129
SF+P NP+LGPSS L +GA D + DK
Sbjct: 182 SFKPVV-NPMLGPSSSALINVGARFPPCMKVVEGVPLNTLLPCLNDTANPPDKVCSLEDV 240
Query: 130 -----------HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
+Q +R IT +LH G+ H L NML+ L ++E+E G I +LY+ S
Sbjct: 241 CGFGGFHDETPNQWFRFITPIFLHAGIIHYLLNMLAQLTATAQVEREMGSISFLILYMAS 300
Query: 179 GFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWT-IYT-NKHFLTLVVIIAIN 235
G G++L F + + SVGASGA+FG + +L +W IY + + +++ + I
Sbjct: 301 GIFGNVLGGNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYIYQPGRKLVYMLIELVIG 360
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
+AVG +P+VDNFAHIGG + G L+G + Y + S R + ++
Sbjct: 361 IAVGFIPYVDNFAHIGGLVMGLLVGMLL------------YPIISPSTRHRTIVICFRIA 408
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
+++VL +V L+ + CSWC YLSC+PTS
Sbjct: 409 AIPIAVVLYVV-----LIRNFYTSNPYAACSWCRYLSCIPTS 445
>gi|330818784|ref|XP_003291518.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
gi|325078290|gb|EGC31949.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
Length = 202
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 20/214 (9%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ + WR + +LH G+FH L NM + L +G++LE+ +G R+ +Y++ G G+L SA+
Sbjct: 3 QGEWWRFFSPIFLHVGIFHYLMNMATQLRVGMQLERAYGGHRIVPIYLLCGVMGNLCSAI 62
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--TLVVIIAINLAVGI-LPHVD 245
+ ++ VGASGA+FG LG +L++LI NW + + TL I + AVG+ LP VD
Sbjct: 63 MLPQSVQVGASGAIFGFLGVLLADLIRNWGVLARPYLNCGTLAFTIITSFAVGLFLPGVD 122
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
N+AH GGFI G L G++FL +L+ A+ +R + + I V L + +
Sbjct: 123 NYAHFGGFIMGILTGWIFLP-----------SLTPKRAIGKRLLLLFVAIPLTVGLFVAL 171
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
++ + + ++ C C YL+C+ W
Sbjct: 172 ------FIVFYKNISPSEWCYGCKYLTCLEFLSW 199
>gi|408397516|gb|EKJ76658.1| hypothetical protein FPSE_03208 [Fusarium pseudograminearum CS3096]
Length = 570
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 23/239 (9%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D+++ + +Q +R IT ++H G+ HI+ N+L L I +E G +R L+Y+ +G
Sbjct: 322 DINQSPEPNQWYRFITSIFMHAGIIHIVFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIF 381
Query: 182 GSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ + SVGASGALFG++ +L +L+ +W + K L +V+ + I +
Sbjct: 382 GNIMGGNYAPPGQPSVGASGALFGIIALVLLDLLYSWKDRRSPVKDLLFIVLDMVIAFVL 441
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL------------------IRPQFGWVEQRYALSG 280
G+LP +DNF HIGGF+ G LG L + PQ G + +
Sbjct: 442 GLLPGLDNFVHIGGFLMGLSLGVCVLHSPNSLRRRMGDGLSYAAVSPQTGETPPHFFKNP 501
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
RK + + W+V +++ + + +V+L +D C WC YL+C+P + W
Sbjct: 502 VGFFKGRKPLWW--AWWLVRAAFLVMIIVVFIVLLNNFYKYHDTCEWCKYLNCLPINDW 558
>gi|340370736|ref|XP_003383902.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 399
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 19/216 (8%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+ ++H GV ++ + L +GI++E+ GF+R+ L+Y ISG GG+L+SA+FI
Sbjct: 190 QTWRLVLSLFIHLGVIDVIVIGIIQLYLGIKIERTAGFLRIALIYFISGIGGNLVSAIFI 249
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFA 248
++ GAS A+FGL ++ EL W I L L+ I+ + LA+G LP +DN A
Sbjct: 250 PYQVTGGASAAVFGLASVLIVELFQVWQIIDKAWLELLKLLSIMLVLLAIGTLPFIDNLA 309
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
+IGG I G +FL FG V+ A +R IL I+ + L+++
Sbjct: 310 NIGGIIFGVPAAIIFLPYITFGKVD---------AWRKR-------ILLIICVPLLLIMF 353
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ ++ D D CS+CHY +C+P + C E
Sbjct: 354 LVCFLLFFFLGDP-DFCSFCHYFNCIPYTSTFCNNE 388
>gi|270012402|gb|EFA08850.1| hypothetical protein TcasGA2_TC006551 [Tribolium castaneum]
Length = 1455
Score = 114 bits (284), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH GV + +L + LE+ G +R+G++YI SG G+L SA+F+
Sbjct: 1247 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1306
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL ++ E++ +W + + N+ L+ I + +G+LP VDN+A
Sbjct: 1307 PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYA 1366
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG- 307
H+ GF+ GFLL + L FG E+R + ++W+ LV G
Sbjct: 1367 HLFGFVFGFLLSYALLPFISFGVYERRKKI---------------VLIWV---CLVSAGV 1408
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
L + LV+L + D C C Y +C+P +R C ++
Sbjct: 1409 LFICLVLLFYIIPVYD-CKICSYFNCIPFTRDFCASQ 1444
>gi|91089053|ref|XP_970266.1| PREDICTED: similar to rhomboid [Tribolium castaneum]
Length = 1486
Score = 114 bits (284), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH GV + +L + LE+ G +R+G++YI SG G+L SA+F+
Sbjct: 1278 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1337
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL ++ E++ +W + + N+ L+ I + +G+LP VDN+A
Sbjct: 1338 PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYA 1397
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG- 307
H+ GF+ GFLL + L FG E+R + ++W+ LV G
Sbjct: 1398 HLFGFVFGFLLSYALLPFISFGVYERRKKI---------------VLIWV---CLVSAGV 1439
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
L + LV+L + D C C Y +C+P +R C ++
Sbjct: 1440 LFICLVLLFYIIPVYD-CKICSYFNCIPFTRDFCASQ 1475
>gi|302911024|ref|XP_003050402.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
gi|256731339|gb|EEU44689.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D+ + +Q +R IT +LH GV HIL N+L L IG +E+ G +R L+YI +G
Sbjct: 323 DIDQSPQPNQWFRFITSIFLHAGVVHILFNLLVQLTIGKDMERAIGPVRFLLVYISAGIF 382
Query: 182 GSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ + S+GASGA+FG++ L +L+ +W + K L + + +AI +
Sbjct: 383 GNIMGGNYAPPGYASMGASGAIFGIIALTLLDLLYSWKDRKSPVKDLLFIFLDMAIAFVL 442
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS-GYSALSRRKFMTYQCIL- 296
G+LP +DNFAHIGGF+ G LG L P + +R YSA+S T
Sbjct: 443 GLLPGLDNFAHIGGFLMGLSLGVCVLHSPNS--LRRRIGQDLSYSAVSPSTGETPAPFFK 500
Query: 297 ----------------WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
W++ +++ + + +V+L R +++ C WC +++C+P W
Sbjct: 501 NPVGFFKGRKPLWWAWWLIRAGFLVMIIVVFIVLLNRFYTSHEVCKWCKHINCLPVKDW 559
>gi|336266774|ref|XP_003348154.1| hypothetical protein SMAC_03999 [Sordaria macrospora k-hell]
gi|380091090|emb|CCC11296.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 555
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 27/242 (11%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ V + +Q WR IT +LH GV HI NML + IG +E+ G IR ++Y+ +G G
Sbjct: 273 MENVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGREMERSIGSIRFFIVYVSAGIFG 332
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++ F + + + GASGALFG++ +L +L+ +W + K L + + I I +G
Sbjct: 333 FVMGGNFAANGMQTTGASGALFGVIALLLLDLLYSWRDRKSPWKDLLFIALDIVIAFVLG 392
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQF------------------GWVEQRYALSGY 281
+LP +DNFAHIGGF++G LG L P G++ Q S +
Sbjct: 393 LLPGLDNFAHIGGFLAGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFF 452
Query: 282 SA----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
S RK + + + W+V + + + + +V+L + CSWC YLSC+P
Sbjct: 453 SNPVGFFKGRKPLWW--VWWLVRAAFLTLIVAIFIVLLNNFYVDHKECSWCKYLSCLPVK 510
Query: 338 RW 339
W
Sbjct: 511 NW 512
>gi|238878377|gb|EEQ42015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 669
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 38/241 (15%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G HI+ N+L + +G +E+ G I+ ++YI SG GG LL A F
Sbjct: 308 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANFT 367
Query: 191 QSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGIL 241
I S GASGALFG++ + + I N +Y KH+ + I I I+L +G+L
Sbjct: 368 PQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGLL 427
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALS---- 285
P +DNF+HIGGF G L V L P + +++ Q++ L+ ++ +
Sbjct: 428 PGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQF-LNNWNPMYSIED 486
Query: 286 --RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND-----HCSWCHYLSCVPTSR 338
R +F + C + I++L+L+I+ LV+L + ND +C WC Y +C+P
Sbjct: 487 KIRSRFFIW-CGVRIIALILMII----YLVLLCKNFFNNDINRGNNCKWCKYFNCIPVKG 541
Query: 339 W 339
W
Sbjct: 542 W 542
>gi|68479248|ref|XP_716303.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46437969|gb|EAK97307.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 38/241 (15%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G HI+ N+L + +G +E+ G I+ ++YI SG GG LL A F
Sbjct: 308 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANFT 367
Query: 191 QSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGIL 241
I S GASGALFG++ + + I N +Y KH+ + I I I+L +G+L
Sbjct: 368 PQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGLL 427
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALS---- 285
P +DNF+HIGGF G L V L P + +++ Q++ L+ ++ +
Sbjct: 428 PGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQF-LNNWNPMYSIED 486
Query: 286 --RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND-----HCSWCHYLSCVPTSR 338
R +F + C + I++L+L+I+ LV+L + ND +C WC Y +C+P
Sbjct: 487 KIRSRFFIW-CGVRIIALILMII----YLVLLCKNFFNNDINRGNNCKWCKYFNCIPVKG 541
Query: 339 W 339
W
Sbjct: 542 W 542
>gi|68479117|ref|XP_716364.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46438031|gb|EAK97368.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 38/241 (15%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G HI+ N+L + +G +E+ G I+ ++YI SG GG LL A F
Sbjct: 308 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANFT 367
Query: 191 QSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGIL 241
I S GASGALFG++ + + I N +Y KH+ + I I I+L +G+L
Sbjct: 368 PQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGLL 427
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALS---- 285
P +DNF+HIGGF G L V L P + +++ Q++ L+ ++ +
Sbjct: 428 PGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQF-LNNWNPMYSIED 486
Query: 286 --RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND-----HCSWCHYLSCVPTSR 338
R +F + C + I++L+L+I+ LV+L + ND +C WC Y +C+P
Sbjct: 487 KIRSRFFIW-CGVRIIALILMII----YLVLLCKNFFNNDINRGNNCKWCKYFNCIPVKG 541
Query: 339 W 339
W
Sbjct: 542 W 542
>gi|327352454|gb|EGE81311.1| rhomboid family membrane protein [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 36/242 (14%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R I +LH G+ HI NM++ L IG +E+ G+ R L+Y SG G +L A
Sbjct: 296 EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA 355
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
F + I S GASG LFG+L +L+ W + +++ I I+ +G+LP +
Sbjct: 356 NFAPAGIASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPGL 415
Query: 245 DNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALS-------------- 285
DNF+HIGGF+ G +LG L +R + G V L Y +S
Sbjct: 416 DNFSHIGGFLVGLVLGISVLRSPDRLRERIGAVTPH--LDPYDPVSASGALGAGDEAGDK 473
Query: 286 RRKFMTYQCI-----------LWIVSLVLVIVGLTLGLVMLLRG-VDANDHCSWCHYLSC 333
++FM Q + LW V +VG+ + ++LL C WC YLSC
Sbjct: 474 AKRFMVKQPVKFFQGRKPLWWLWWVVRAGTLVGIVIAFILLLDNFYKYRSTCGWCRYLSC 533
Query: 334 VP 335
+P
Sbjct: 534 LP 535
>gi|241859201|ref|XP_002416189.1| rhomboid, putative [Ixodes scapularis]
gi|215510403|gb|EEC19856.1| rhomboid, putative [Ixodes scapularis]
Length = 496
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 31/232 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+FH+ ++ L + LE+ G +R ++Y+ SG G+L SA+F+
Sbjct: 290 QFYRLWTSLFLHAGIFHLCITVIVQLFVMRDLEKLAGPVRTAVIYMCSGVAGNLASAIFV 349
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYT--NKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA FGLL + E+I W + + L L A+ +G+LP VDN+A
Sbjct: 350 PYRAEVGPAGAQFGLLACLFVEVIHCWQMLRRPSSALLKLGGGAAVLFLLGLLPWVDNYA 409
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GF+ GFLL + L FG ++ ++ ++W + ++V V L
Sbjct: 410 HVFGFVFGFLLSYALLPFVSFGSYDRTAKVA---------------LIW--ACLIVSVAL 452
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVT 360
LGLV+L V CS+CHYL+C+P +R C D +++N+T
Sbjct: 453 FLGLVVLFY-VHPIYECSFCHYLNCLPLTRDLC-----------DSHRINIT 492
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Query: 100 QPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIG 159
+ K L+ TL +MGA V+ +++ + +RL+T +LHGG+ HI NM +L +IG
Sbjct: 153 EVIKSRNLIDIDIYTLIQMGA-KVNVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIG 211
Query: 160 IRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI 219
+E +G R +Y+IS GGS++S LF ++ISVGASGA+FGLLG+ML +
Sbjct: 212 REVEAVYGSKRYIAIYVISALGGSVVSYLFKPNSISVGASGAIFGLLGAMLIFGLKERDK 271
Query: 220 YTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++ ++ I +N+ +GI +P++DNFAH+GG I G + F+ + F
Sbjct: 272 IGKQYMKNILETIGLNVIIGITIPNIDNFAHLGGLILGTITSFILFKKKNF 322
>gi|336472615|gb|EGO60775.1| hypothetical protein NEUTE1DRAFT_76205 [Neurospora tetrasperma FGSC
2508]
gi|350294152|gb|EGZ75237.1| rhomboid-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 550
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 29/256 (11%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ V + +Q WR IT +LH GV HI NML + IG +E+ G IR ++Y+ +G G
Sbjct: 272 MESVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFG 331
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++ F + + + GASGALFG++ +L +L+ +W + K L + + I I+ +G
Sbjct: 332 FVMGGNFAANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLG 391
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQF------------------GWVEQRYALSGY 281
+LP +DNFAHIGGF++G LG L P G++ Q S +
Sbjct: 392 LLPGLDNFAHIGGFLTGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFF 451
Query: 282 SA----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
S RK + + + W+V + + + + +++L + CSWC YLSC+P
Sbjct: 452 SNPVGFFKGRKPLWW--VWWLVRAAFLTLTVVIFILLLNNFYVDHKECSWCKYLSCLPVK 509
Query: 338 RWSCRTEPAFCSTTQD 353
W C + TTQD
Sbjct: 510 NW-CE-DGNLQITTQD 523
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL MGA V+++++ Q WRLITC +LHGG+ HI NM +L +IG +E +G I+ L
Sbjct: 168 TLVIMGA-KVNELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYIL 226
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
+Y+ S GGS+ S +F ++ISVGASGA+FGL G+ML + N + + L ++
Sbjct: 227 IYLFSALGGSIFSYIFSPNSISVGASGAIFGLFGAMLVFGVKNRHRIGKNYVINLFKVVI 286
Query: 234 INLAVGI-LPHVDNFAHIGGFISG 256
IN+ +G+ + ++DN HIGG ++G
Sbjct: 287 INIFIGVTISNIDNAGHIGGLVAG 310
>gi|449302177|gb|EMC98186.1| hypothetical protein BAUCODRAFT_121073 [Baudoinia compniacensis
UAMH 10762]
Length = 520
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 129/279 (46%), Gaps = 40/279 (14%)
Query: 85 NSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGG 144
+SVSC L FS P NP +G S ++ +Q WR I +LH G
Sbjct: 215 DSVSCTLSELCGFSGVP---NPHVGGS-----------INDKPAPNQWWRFIVPIFLHAG 260
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALF 203
+ HI N+L L +G +E+ G IR ++Y +G G +L F + I S G SG+LF
Sbjct: 261 IIHIAFNLLLQLTLGADVEKLIGSIRFTIVYFAAGIFGFVLGGNFAANGIASCGCSGSLF 320
Query: 204 GLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
G+L L +L+ W K L +++ + I +G+LP +DNF+HIGGF+ G +LG
Sbjct: 321 GILAITLLDLLYTWHQREGPIKDLLFILIDVIIAFVLGLLPGLDNFSHIGGFLMGLVLGV 380
Query: 262 VFLIRPQFGWVEQRYALSGYSALSRRK--------------------FMTYQCILWIVSL 301
L P + YS LS + F + I W+ L
Sbjct: 381 CILRSPTTFSRRTSQDVGRYSGLSNARQSTSGREDGLQSFFRNPIAFFQNRRGIWWVWWL 440
Query: 302 V--LVIVGLTLGLVMLLRGV-DANDHCSWCHYLSCVPTS 337
V +VG +G V+LL+ C+WC YLSC+P +
Sbjct: 441 VRAAALVGCLIGFVLLLKNFYQWRTGCTWCKYLSCLPVT 479
>gi|328773737|gb|EGF83774.1| hypothetical protein BATDEDRAFT_3368, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 118/209 (56%), Gaps = 22/209 (10%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q +R LHGG+ HIL NM L G++LE++ G+ R+ L+YI SG GG + A
Sbjct: 104 DQWFRFFVPIMLHGGIVHILFNMSFQLQTGLQLEKDMGWWRMALIYIGSGVGGFVFGASL 163
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDN 246
+ SVGASG+L+G++ +L +LI NW++ L +V I +L +G+LP++DN
Sbjct: 164 SDVRVPSVGASGSLYGMVACLLLDLIQNWSLIKRPWIELLKMVGNIIFSLLLGMLPYIDN 223
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
AH+GGFI+G LG +F+ + FG ++ RRKF L + +L +IV
Sbjct: 224 LAHVGGFITGICLGILFMPKIYFGKWDK-----------RRKFA-----LMVAALPALIV 267
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+VM D +++C+WC Y +C+P
Sbjct: 268 ---FFVVMTKSFYDGSNNCTWCKYFNCLP 293
>gi|254572129|ref|XP_002493174.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032972|emb|CAY70995.1| Hypothetical protein PAS_chr3_0934 [Komagataella pastoris GS115]
gi|328352810|emb|CCA39208.1| Rhomboid family member 1 [Komagataella pastoris CBS 7435]
Length = 562
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 32/241 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR+IT +LH G HI+ N+L + + +E+ G IR G +Y+ SG G +L + F
Sbjct: 265 QWWRMITPMFLHAGFIHIIFNLLLQMTLAYNIERVIGPIRYGTIYLASGVAGFVLGSNFS 324
Query: 191 QSNI-SVGASGALFGLLGSMLSELITNWTI----------YTNKHFLTLVVIIAINLAV- 238
+ S GASGAL G++ + LIT + ++F ++++ + L +
Sbjct: 325 PVGVSSTGASGALLGVMAVNILLLITTKSTAHFGGVKGKQVPVRNFKVILIVSIVELVII 384
Query: 239 ---GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGW------------VEQRYALSGYSA 283
G+LP +DNFAHIGGF G LLG + P F + Q+ L +S+
Sbjct: 385 FFLGLLPGLDNFAHIGGFAMGLLLGLTLIDDPFFVYDKGYYNKIYTERTSQKEKLKNWSS 444
Query: 284 LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLL-----RGVDANDHCSWCHYLSCVPTSR 338
+ + + +W++ V +V L L+ +G +++D C WC Y++C+P +
Sbjct: 445 HLKTSRHSTKFFIWLLVRVAALVTAILYFYFLIHNFQKKGSESSDSCRWCKYINCLPVNG 504
Query: 339 W 339
W
Sbjct: 505 W 505
>gi|148691816|gb|EDL23763.1| rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I +V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|20071092|gb|AAH27346.1| Rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I +V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|391344354|ref|XP_003746466.1| PREDICTED: inactive rhomboid protein 1-like [Metaseiulus
occidentalis]
Length = 692
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
Query: 85 NSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGG 144
+ VSC++ G F F E+P Q +RL+T +LH G
Sbjct: 451 SQVSCLSDVCGMFPFVRSPESP-----------------------DQIYRLLTSLFLHAG 487
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFG 204
+ H + + + LE+ +G R+G +Y++SG GG+L SA+F+ VG S ALFG
Sbjct: 488 LLHFALTAIVQMWLMRDLERIYGPHRIGAIYMMSGIGGNLASAIFVPYRADVGPSAALFG 547
Query: 205 LLGSMLSELITNWTIYTNKHFLTL--VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
++ ++EL+ W ++ TL V+ I I + G+ P DNF H+ G I GF+L V
Sbjct: 548 IMAIFIAELVKLWDRLLDRKRATLHAVLPILIGIVCGLTPWTDNFGHLFGLIIGFVLAMV 607
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
+Q L + R+ + L SLV+V VGL + +L +
Sbjct: 608 -----PHNSEKQNADLDESQMIEYRRKARRRWCLCAASLVIVFVGLLVWFTIL-----PD 657
Query: 323 DHCSWCHYLSCVP 335
C++CHY +C+P
Sbjct: 658 IQCTFCHYFTCLP 670
>gi|226437617|ref|NP_034247.2| inactive rhomboid protein 1 [Mus musculus]
gi|190360227|sp|Q6PIX5.2|RHDF1_MOUSE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid family member 1
Length = 856
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I +V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|354548360|emb|CCE45096.1| hypothetical protein CPAR2_701000 [Candida parapsilosis]
Length = 664
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 26/250 (10%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R+ +LH G HI+ N+L L +G +E+ G ++ ++YI+SG G LL A F
Sbjct: 315 NQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIGILKYAIIYIVSGISGFLLGANF 374
Query: 190 IQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHF----LTLVVIIAINLAVGI 240
I S GASGALFG++ + + I N +Y H+ ++ I I+L +G+
Sbjct: 375 TPQGIASTGASGALFGIVATNIILFIYAGRKNTNMYGTTHYKLFIFFMICEIIISLVLGL 434
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALSRRK 288
LP +DNF+H+GGF G L + L P + + + Q++ + +
Sbjct: 435 LPGLDNFSHLGGFAMGILTAVLLLKDPFWVYKDGIITYSRDPTTWQQFVNNWNPMYAYED 494
Query: 289 FMTYQCILW----IVSLVLVIVGLTLGLVMLLR-GVDANDHCSWCHYLSCVPTSRWSCRT 343
+ +LW +V+L L+IV L D++++C WC Y +C+P W
Sbjct: 495 KLQIPFLLWCGARVVALALIIVYFALLCKNFFNDNYDSSENCKWCKYFNCIPVKGWCDIG 554
Query: 344 EPAFCSTTQD 353
E S T D
Sbjct: 555 EVTVTSATSD 564
>gi|290991574|ref|XP_002678410.1| predicted protein [Naegleria gruberi]
gi|284092022|gb|EFC45666.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 7/208 (3%)
Query: 105 NPLLGPSSVTLQKMGAL--DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
NP++GP + K GA D+ K D Q WR + ++H V +L N++ LL ++
Sbjct: 137 NPMIGPKEEIVIKFGAKKNDLMKS-DGTQFWRFLVFMFIHQSVLILLFNLMWLLTTVRKI 195
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN 222
E + R+ ++Y+ISG GG LLS++F IS G++ + G++ + LSELI NW + N
Sbjct: 196 EGVWTAPRMFIIYMISGIGGGLLSSVFSFDLISTGSTSCIVGIISASLSELILNWDVVFN 255
Query: 223 --KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG 280
K ++++ + I +G+LP VD FAHIGGF+ GFL G + R Q +E+++
Sbjct: 256 PFKSLFSVIMQLLIFFVIGLLPTVDQFAHIGGFVCGFLTGIMLCARKQKPELEKKWV--K 313
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGL 308
++ ++ R I++ V GL
Sbjct: 314 FTVIASRAVAAVLLIIYFAIFFPVFYGL 341
>gi|157427926|ref|NP_001098870.1| inactive rhomboid protein 1 [Bos taurus]
gi|190360184|sp|A7YWH9.1|RHDF1_BOVIN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|157279163|gb|AAI34589.1| RHBDF1 protein [Bos taurus]
gi|296473636|tpg|DAA15751.1| TPA: rhomboid family 1 [Bos taurus]
Length = 856
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + LV + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|85102797|ref|XP_961391.1| hypothetical protein NCU01305 [Neurospora crassa OR74A]
gi|16944591|emb|CAC18292.2| related to membrane protein [Neurospora crassa]
gi|28922936|gb|EAA32155.1| predicted protein [Neurospora crassa OR74A]
Length = 548
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 29/256 (11%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ V + +Q WR IT +LH GV HI NML + IG +E+ G IR ++Y+ +G G
Sbjct: 272 MESVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFG 331
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++ F + + + GASGALFG++ +L +L+ +W + K L + + I I+ +G
Sbjct: 332 FVMGGNFAANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLG 391
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQF------------------GWVEQRYALSGY 281
+LP +DNFAHIGGF++G LG L P G++ Q S +
Sbjct: 392 LLPGLDNFAHIGGFLAGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFF 451
Query: 282 SA----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
S RK + + W+V + + + + +++L + CSWC YLSC+P
Sbjct: 452 SNPVGFFKGRKPLWW--AWWLVRAAFLTLTVVIFILLLNNFYVDHKECSWCKYLSCLPVK 509
Query: 338 RWSCRTEPAFCSTTQD 353
W C + TTQD
Sbjct: 510 NW-CE-DGNLQITTQD 523
>gi|115387927|ref|XP_001211469.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195553|gb|EAU37253.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 517
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 163/379 (43%), Gaps = 76/379 (20%)
Query: 27 TVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPK-- 84
T P+E +PQ P+ Y +I ++ PC N ++ CP
Sbjct: 157 TGSPIET--KPQFNPMIGPSAYIQINMGSRYT----PCMRNENKVQNSKIEFLMPCPNST 210
Query: 85 -NSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHG 143
N++ C L F+ P NP + G+LD + Q WR I +LH
Sbjct: 211 TNALECTLSELCGFNGVP---NPTVN---------GSLDAKPAPN--QWWRFIIPMFLHS 256
Query: 144 GVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS-NISVGASGAL 202
G+ HI N+L + +G +E+ G+ R GL+Y SG G +L + S G SGAL
Sbjct: 257 GIIHIGFNLLVQMTMGADMERMVGWWRYGLVYFASGIWGFVLGGNYAAPFEASCGCSGAL 316
Query: 203 FGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLG 260
FG+L + +L+ W + + +V+ + I+ +G+LP +DNF+HIGGF+ G LG
Sbjct: 317 FGILALYILDLLYTWKDRASPVVELVIMVLGVGISFVLGLLPGLDNFSHIGGFVMGLALG 376
Query: 261 FVFL-----IRPQFGWVEQRY-ALSG----------YSALSRRKFMTY------------ 292
+ +R + G Y A+SG A S+ FM +
Sbjct: 377 LTLMRSPNALRERIGLARAPYVAMSGGVASTSEGETKPAGSKSSFMDFFKARKAGTATAD 436
Query: 293 ----------QCILW-------IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+ LW + +LV ++G L LV + ++N CSWC+ LSC+P
Sbjct: 437 NPGPVGFFKGRKPLWWAWWLVRLGALVAALIGFILLLVDFYKYHESN--CSWCYRLSCLP 494
Query: 336 TSRWSCRT--EPAFCSTTQ 352
W C+ EP +TT
Sbjct: 495 VKDW-CQQGMEPYKITTTN 512
>gi|354499596|ref|XP_003511894.1| PREDICTED: inactive rhomboid protein 1-like [Cricetulus griseus]
gi|344254275|gb|EGW10379.1| Rhomboid family member 1 [Cricetulus griseus]
Length = 856
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I V + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 846
>gi|169615256|ref|XP_001801044.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
gi|111061058|gb|EAT82178.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
Length = 521
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 35/254 (13%)
Query: 119 GALDVSKVVD-------KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
G D S V D +Q WR I +LH G+ HI NML L +G +E+E G +R
Sbjct: 222 GVPDQSAVTDFRDRSHEPNQWWRFIVPIFLHAGIIHIGFNMLLQLTLGRDMEKEIGPLRF 281
Query: 172 GLLYIISGFGGSLLSALFIQSNIS-VGASGALFGLLGSMLSELITNWTIYTN--KHFLTL 228
L+Y +G G +L + +S VGASG+LFG+L L +L+ W+ + K L L
Sbjct: 282 ALVYFSAGIFGFVLGGNYAADGLSSVGASGSLFGILALTLLDLLYTWSTRRSPVKDLLFL 341
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ-----FGWVEQRYA------ 277
++ IAI +G+LP +DNF+HIGGF+ G +LG L PQ G E YA
Sbjct: 342 LLDIAIAFVLGLLPGLDNFSHIGGFLMGLVLGVCLLHSPQALRERIGVDEPPYATVDTQP 401
Query: 278 LSGYSALSRRK----------FMTYQCILWIVSLVLVIVGLT---LGLVMLLRGV-DAND 323
L+ + S+++ F + LW ++ GL + V+LLR + +
Sbjct: 402 LAPTDSESKQQLSRFAKAPIGFFKARKPLWWAWWLVRAGGLVCAFIAFVLLLRNFYEWRN 461
Query: 324 HCSWCHYLSCVPTS 337
CSWC +L+C+P +
Sbjct: 462 TCSWCKHLTCLPIT 475
>gi|335284752|ref|XP_003124711.2| PREDICTED: inactive rhomboid protein 1-like [Sus scrofa]
Length = 855
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVHPV----RCEWCEFLTCIPFTDKFC 845
>gi|344232848|gb|EGV64721.1| rhomboid-domain-containing protein [Candida tenuis ATCC 10573]
Length = 535
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 27/260 (10%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V D HQ +R+IT ++H G HIL N+L + +G +E+ G ++ ++Y++SG G
Sbjct: 190 VDDAYDPHQWYRIITPIFIHAGFLHILFNLLLQVTMGFSIERAIGSVKYAIIYLLSGVSG 249
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IA 233
LL A F + + S GASG+LFG++ + + I N +Y K F + I I
Sbjct: 250 FLLGANFTPNGVASSGASGSLFGIVATNIVMFIYCGKKNTNMYGTKKFGLFLCIMFGEIV 309
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGY 281
++ +G+LP +DNF+HIGGF G L + L P F + + Q +A +
Sbjct: 310 VSFVLGLLPGLDNFSHIGGFAIGVLSSILLLKDPFFVYEDGIITYQSHLSIWQEFANNWN 369
Query: 282 SALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRG------VDANDHCSWCHYLSCVP 335
+ + + +W VL + + +L+ + + C WC Y+SC+P
Sbjct: 370 PYYNFEDKIVSRFYIWCGVRVLCFALIFVYFALLINNFFGKSILPEENSCHWCKYISCLP 429
Query: 336 TSRWSCRTEPAFCSTTQDGN 355
+ W + E + + + D N
Sbjct: 430 VNGWCEQGELSVQTNSADDN 449
>gi|451847170|gb|EMD60478.1| hypothetical protein COCSADRAFT_40121 [Cochliobolus sativus ND90Pr]
Length = 535
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 129/251 (51%), Gaps = 35/251 (13%)
Query: 119 GALDVSKVVD-------KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
G D S V D +Q WR IT +LH GV HI NML +G +E+E G +R
Sbjct: 254 GVPDQSSVTDFKDRSHEPNQWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRF 313
Query: 172 GLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTL 228
L+Y +G G +L + I SVG SG+LFG+L L +L+ +W+ + K L L
Sbjct: 314 ALVYFSAGIFGFVLGGNYAPDGITSVGCSGSLFGVLALTLLDLLYHWSTRRSPVKDLLFL 373
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA------ 277
++ +AI +G+LP +DNF+HIGGF+ G +LG L +R + G E YA
Sbjct: 374 LLDMAIAFVIGLLPGLDNFSHIGGFLMGLVLGICILHSPEALRKRTGQGEPPYATVDTQP 433
Query: 278 --------LSGYSALSRRK---FMTYQCILWIVSLVLV--IVGLTLGLVMLLRGV-DAND 323
+S +A +++ F + + W LV ++ + +G ++LLR + +
Sbjct: 434 LAPKSESPVSKVTAFAKQPIGFFKGRKPLWWAWWLVRAGSLMAVFIGFILLLRNFYEWRN 493
Query: 324 HCSWCHYLSCV 334
CSWC +LSC+
Sbjct: 494 TCSWCKHLSCL 504
>gi|50547561|ref|XP_501250.1| YALI0B23078p [Yarrowia lipolytica]
gi|49647116|emb|CAG83503.1| YALI0B23078p [Yarrowia lipolytica CLIB122]
Length = 611
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 45/268 (16%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
+++ D + Q WR IT ++H G+ HI NML + +G +E++ G IR +
Sbjct: 335 MKQTPGSDGGSITSGGQWWRFITPIFMHAGIIHIGFNMLLQMTLGADIEKQIGIIRYFFI 394
Query: 175 YIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVI 231
Y G GG L + I S GASG+LFG++ L +L+ NW+I+ N + + ++
Sbjct: 395 YFACGIGGFLFGGNYTPDGIASTGASGSLFGIIAIDLLDLLFNWSIFRNPVRILIIHIIE 454
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL------SGYSALS 285
I ++ +G+LP +DNF+HIGGFI G LLG L P V++ +L S A
Sbjct: 455 IVVSFVLGLLPGLDNFSHIGGFIVGVLLGIAILRSP-LKVVDEGTSLFNQGMSSEEQARL 513
Query: 286 RRKFMTYQ---------------------------------CILWIVSLV-LVIVGLTLG 311
RR+ + Q I ++V L L +VG+ G
Sbjct: 514 RRRQLIQQEEDDKNHLLAVFPKSRDQLDRDIEQFKSRPRRWYIWFLVRLACLALVGVFFG 573
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRW 339
L+ D C WC YLSC+P + W
Sbjct: 574 LLSRDFQNGGGD-CHWCKYLSCLPVNGW 600
>gi|19483909|gb|AAH23469.1| Rhbdf1 protein, partial [Mus musculus]
Length = 621
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 32/232 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 418 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 477
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 478 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 537
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I +V + +
Sbjct: 538 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 580
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLN 358
L ++ V C WC +L+C+P + FC + QL+
Sbjct: 581 LAGLVVLFYFYPV----RCEWCEFLTCIPFTD-------KFCEKYELDAQLH 621
>gi|453087192|gb|EMF15233.1| rhomboid-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 503
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 25/240 (10%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + D Q WR I ++H G+ HI N+L + +G +E G +R +LY S
Sbjct: 239 GSLDDTPAPD--QWWRFIVPIFIHAGIIHIGFNLLLQVTLGRDVELLIGSVRFAILYFAS 296
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G +L F + I S GASG+LFG+L L +L+ W + K + +++ I I
Sbjct: 297 GIFGFILGGNFAATGIASCGASGSLFGILAITLLDLLYTWKDRRSPIKDLMFIIIDILIA 356
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF------GWVEQRYALSGYSALSRRKF 289
+G+LP +DNF+HIGGF+ G +LG L P ++ Y Y
Sbjct: 357 FVLGLLPGLDNFSHIGGFLMGLVLGVCLLRSPAVIARRTSAMIDPVYTHVAYQNDRNASM 416
Query: 290 MTYQCI-------------LWIVSLVLVIVGLTLGLVMLLRGVDA-NDHCSWCHYLSCVP 335
T+ W + +VG+ +G ++LL+ + CSWC YLSC+P
Sbjct: 417 KTFIKDPVGHFKDRRGLWWAWWAVRAIALVGVLVGFILLLKNFYVWRNGCSWCKYLSCLP 476
>gi|452845449|gb|EME47382.1| hypothetical protein DOTSEDRAFT_166397 [Dothistroma septosporum
NZE10]
Length = 505
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 27/241 (11%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD D Q WR I +LH G+ HI N+L + +G +E + G IR +LY S
Sbjct: 231 GSLDQKPEPD--QWWRFIVPIFLHAGIIHIGFNLLLQMTLGRDVELQIGSIRFAILYFAS 288
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G +L F + I S G SG+LFG+L L +L+ +W + K L ++V + I
Sbjct: 289 GIFGFVLGGNFAATGIASTGCSGSLFGILALTLLDLLYHWRERNSPIKDLLFILVDVIIA 348
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIR-------------PQFGWVEQRYALSGYS 282
+G+LP +DNF+HIGGF+ G +LG VFL+R P + ++ +
Sbjct: 349 FVLGLLPGLDNFSHIGGFLMGLVLG-VFLLRSPHAVARRTSQVPPDYTYIPRNEDPQSDG 407
Query: 283 ALSRRK-----FMTYQCILWIVSLV--LVIVGLTLGLVMLLRGVDANDH-CSWCHYLSCV 334
A S K F + + W+ LV ++ + +G ++LL+ H CSWC YLSC+
Sbjct: 408 ARSFIKSPLGFFKDRRGVWWVWWLVRAAALIAVLIGFILLLKNFYVWKHGCSWCKYLSCL 467
Query: 335 P 335
P
Sbjct: 468 P 468
>gi|149239566|ref|XP_001525659.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451152|gb|EDK45408.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 797
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R+ +LH G HI N+L L +G +E+ G ++ L+YI+SG G LL A F
Sbjct: 408 NQWYRIFIPIFLHAGFLHIFFNLLLQLTMGASIERNIGILKYALIYIMSGIAGFLLGANF 467
Query: 190 IQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGI 240
I S GASGALFG++ + + I N +Y KH+ + I I+ +G+
Sbjct: 468 TPQGIASTGASGALFGVVATNIILFIYTGRKNTNMYGTKHYKLFIFFMFCEIVISFVLGL 527
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALSRRK 288
LP +DNF+H+GGF G L + L P + + + Q++ + +
Sbjct: 528 LPGLDNFSHLGGFAMGILSAILLLKDPFWIYNDGIITYRRDPTTWQQFVNNWNPLFAYED 587
Query: 289 FMTYQCILW----IVSLVLVIVGLT-LGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+ + ++W +V+LVL+IV L D +++C WC Y +C+P W
Sbjct: 588 KIPLRFLIWVGVRVVALVLIIVYFVLLAKNFFNNDYDLSENCKWCKYFNCIPVKGW 643
>gi|71795631|ref|NP_001025205.1| inactive rhomboid protein 1 [Rattus norvegicus]
gi|123781648|sp|Q499S9.1|RHDF1_RAT RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|71121786|gb|AAH99777.1| Rhomboid 5 homolog 1 (Drosophila) [Rattus norvegicus]
gi|149052201|gb|EDM04018.1| rhomboid family 1 (Drosophila) [Rattus norvegicus]
Length = 856
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|332844857|ref|XP_510701.3| PREDICTED: inactive rhomboid protein 1 [Pan troglodytes]
gi|410226938|gb|JAA10688.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410253062|gb|JAA14498.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410292752|gb|JAA24976.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410338761|gb|JAA38327.1| rhomboid 5 homolog 1 [Pan troglodytes]
Length = 855
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|190195531|gb|ACE73629.1| rhomboid family 1 (predicted) [Sorex araneus]
Length = 868
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 665 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 724
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 725 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 784
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 785 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 827
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 828 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 858
>gi|190341097|ref|NP_071895.3| inactive rhomboid protein 1 [Homo sapiens]
gi|426380501|ref|XP_004056901.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
gi|190360226|sp|Q96CC6.2|RHDF1_HUMAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid 5 homolog 1; AltName:
Full=Rhomboid family member 1; AltName: Full=p100hRho
gi|66350797|emb|CAI95608.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
gi|119606282|gb|EAW85876.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158255790|dbj|BAF83866.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|15680161|gb|AAH14425.1| Rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 855
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|10438710|dbj|BAB15318.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|325090543|gb|EGC43853.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 530
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
G+LD + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y
Sbjct: 266 QGSLDDKP--EPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFA 323
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
SG G +L A F I S GASG+LFG+ +L+ +W+ +N K L +++ +AI
Sbjct: 324 SGIFGFILGANFAPPGIPSTGASGSLFGIFALTFLDLLYSWSSRSNPVKELLIMLITVAI 383
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR------------------- 275
+ +G+LP +DNF+HIGGF+ G +LG L P + +R
Sbjct: 384 SFVLGLLPGLDNFSHIGGFMVGLVLGISVLRSPDK--LRKRIDSITPHHDPYDPLSASGA 441
Query: 276 --YALSGYSALSRRK--FMTYQCI-----------LWIVSLVLVIVGLTLGLVMLLRG-V 319
A+ K FM Q + W V +VG+ + ++LL
Sbjct: 442 LGAGAGAGDAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVVRAGTLVGILVAFILLLNNFY 501
Query: 320 DANDHCSWCHYLSCVP 335
C WC YLSC+P
Sbjct: 502 KYRSTCGWCKYLSCLP 517
>gi|156378550|ref|XP_001631205.1| predicted protein [Nematostella vectensis]
gi|156218241|gb|EDO39142.1| predicted protein [Nematostella vectensis]
Length = 587
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 29/217 (13%)
Query: 131 QGWRLITCNWLH--------GGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
QG+RL++ +LH G+ H+L N++ ++IG +E E G IR +Y++SG GG
Sbjct: 278 QGYRLMSAVFLHLGNYGNCLHGIIHLLLNLIFQVIIGRMIEIEIGTIRTACIYLVSGLGG 337
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGI 240
SL+S +F VG+SGALFGL+ ML+ + ++ L+ II + A+G
Sbjct: 338 SLVSGVFTPLTPQVGSSGALFGLIALMLAHYCYYYPSLRRPYWNLPILLSIIILCFALGT 397
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVS 300
LP+V NF HIGGF+ G L V R GW +RR C W +
Sbjct: 398 LPYVGNFVHIGGFVFGLLTTVVLTRRGTVGW-------------ARRT----SCRYWSIK 440
Query: 301 LVLVIVGLTLGLV--MLLRGVDANDHCSWCHYLSCVP 335
L+ + + +TL +V +LL V+ + C CH + C+P
Sbjct: 441 LISLALLITLTIVCFLLLYTVENTEFCKNCHLIDCIP 477
>gi|451997902|gb|EMD90367.1| hypothetical protein COCHEDRAFT_1179059 [Cochliobolus
heterostrophus C5]
Length = 535
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 28/235 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q WR IT +LH GV HI NML +G +E+E G +R L+Y +G G +L
Sbjct: 270 EPNQWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGFVLGG 329
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
+ I SVG SG+LFG+L L +L+ NW+ + K + +++ +AI +G+LP +
Sbjct: 330 NYAPDGITSVGCSGSLFGILALTLLDLLYNWSTRRSPVKDLIFILLDMAIAFVIGLLPGL 389
Query: 245 DNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRK----------- 288
DNF+HIGGF+ G +LG + +R + G E YA L+ +
Sbjct: 390 DNFSHIGGFLMGLVLGICIIHSPEALRKRTGQGEPPYATVDTQPLAPKSENPASKVTVFA 449
Query: 289 ------FMTYQCILWIVSLVLV--IVGLTLGLVMLLRGV-DANDHCSWCHYLSCV 334
F + + W+ LV ++ + +G ++LLR + + CSWC +LSC+
Sbjct: 450 KQPIGFFKGRKPLWWVWWLVRAGSLMAVFIGFILLLRNFYEWRNTCSWCKHLSCL 504
>gi|393218506|gb|EJD03994.1| rhomboid-domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 528
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 26/214 (12%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R IT +LH G HI+ NML+ L + +LE+E G L+Y +G G++L F
Sbjct: 306 NQWFRFITPIFLHAGFIHIILNMLAQLYVSAQLEREMGTGGFFLVYFAAGIFGNILGGNF 365
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWTIY--TNKHFLTLVVIIAINLAVGILPHVDN 246
+ SVGASGA+FG + +L +W + + + +++ + + + +G +P+VDN
Sbjct: 366 SLVGVPSVGASGAIFGTVAVSWVDLFAHWKYHYRPSTRLIYMIIELILGIGMGFIPYVDN 425
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
FAH+GGF+ G L+G +F Y + S R +T+ + V LV+V+
Sbjct: 426 FAHLGGFLMGLLVGMIF------------YPV--ISETRRHNMITWGFRIAAVPLVIVL- 470
Query: 307 GLTLGLVMLLRG---VDANDHCSWCHYLSCVPTS 337
V+L R D + C WC YLSC+PT+
Sbjct: 471 -----FVVLTRNFYTTDPSASCGWCRYLSCIPTN 499
>gi|281183140|ref|NP_001162285.1| inactive rhomboid protein 1 [Papio anubis]
gi|190360187|sp|A9L8T6.1|RHDF1_PAPAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|160904112|gb|ABX52099.1| rhomboid 5 homolog 1 (predicted) [Papio anubis]
Length = 855
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>gi|426380485|ref|XP_004056893.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
Length = 876
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 733 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 792
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 793 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 835
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 836 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 866
>gi|397476068|ref|XP_003809433.1| PREDICTED: inactive rhomboid protein 1 [Pan paniscus]
Length = 876
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 733 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 792
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 793 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 835
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 836 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 866
>gi|297697614|ref|XP_002825944.1| PREDICTED: inactive rhomboid protein 1 [Pongo abelii]
Length = 855
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>gi|226289269|gb|EEH44781.1| DHHC zinc finger membrane protein [Paracoccidioides brasiliensis
Pb18]
Length = 519
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 30/243 (12%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y SG G
Sbjct: 264 IKQKPEPNQWFRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFG 323
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+L A F S I S GASG L G+L +L W + +++ IAI+ +G
Sbjct: 324 FILGANFAASGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLG 383
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRP-----------------------QFGWVEQRY 276
+LP +DNF+HIGGF+ G +LG L P + G ++
Sbjct: 384 LLPGLDNFSHIGGFLVGLVLGISLLRSPDRLRRIGASGDPYEPVVASGALVEDGVESKKK 443
Query: 277 ALSGYSALSRRKFMTYQCILWIVSLVL---VIVGLTLGLVMLLRG-VDANDHCSWCHYLS 332
+ + A KF T + LW V ++ +VG+ + ++LL C WC YLS
Sbjct: 444 MKNKFMATKPVKFFTGRKPLWWVWWLVRAGTLVGIVIAFILLLNNFYKYRSKCGWCKYLS 503
Query: 333 CVP 335
C+P
Sbjct: 504 CLP 506
>gi|225555969|gb|EEH04259.1| DHHC zinc finger membrane protein [Ajellomyces capsulatus G186AR]
Length = 540
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
G+LD + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y
Sbjct: 276 QGSLDDKP--EPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFA 333
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
SG G +L A F I S GASG+LFG+ +L+ +W+ +N K L +++ +AI
Sbjct: 334 SGIFGFILGANFAPPGIPSTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITVAI 393
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR------------------- 275
+ +G+LP +DNF+HIGGF+ G +LG L P + +R
Sbjct: 394 SFVLGLLPGLDNFSHIGGFMVGLVLGISVLRSPDK--LRRRIDSITPHHDPYDPLSASGA 451
Query: 276 --YALSGYSALSRRK--FMTYQCI-----------LWIVSLVLVIVGLTLGLVMLLRG-V 319
A+ K FM Q + W V +VG+ + ++LL
Sbjct: 452 LGAGAGAGDAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVVRAGTLVGILVAFILLLNNFY 511
Query: 320 DANDHCSWCHYLSCVP 335
C WC YLSC+P
Sbjct: 512 KYRSTCGWCKYLSCLP 527
>gi|47220058|emb|CAG12206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 894
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YIISG G+L SA+F+
Sbjct: 691 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 750
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F+ L+ ++ A G+LP +DNFA
Sbjct: 751 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFIKLLCVVLFLFAFGLLPWIDNFA 810
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ L R++ I+ +LV VGL
Sbjct: 811 HICGFISGFFLSFAFLPYISFGRMD----------LCRKRCQ-------IIVFLLVFVGL 853
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC L+C+P + C
Sbjct: 854 FSGLVVLFYVYPIK--CEWCELLTCIPFTDKFC 884
>gi|119912793|ref|XP_596084.3| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|297487396|ref|XP_002696211.1| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|296476011|tpg|DAA18126.1| TPA: rhomboid 5 homolog 2-like [Bos taurus]
Length = 825
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SALF+
Sbjct: 622 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 741
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSLV V GL
Sbjct: 742 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSLV-VFAGL 784
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 785 FASLVIWLYIYPI--HWPWVEYLTCFPFTSRFCEKYE 819
>gi|190360186|sp|B1MT31.1|RHDF1_CALMO RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|169246092|gb|ACA51068.1| rhomboid family 1 (predicted) [Callicebus moloch]
Length = 855
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>gi|344292280|ref|XP_003417856.1| PREDICTED: inactive rhomboid protein 1-like [Loxodonta africana]
Length = 856
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 32/232 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILASPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLN 358
+L ++ V C WC +L+C+P + FC + QL+
Sbjct: 816 LGSLVVLFYFYPV----RCEWCEFLTCIPFTD-------KFCEKYELDTQLH 856
>gi|284005108|ref|NP_001164883.1| rhomboid family member 1 [Oryctolagus cuniculus]
gi|218157236|gb|ACK58461.1| rhomboid family 1 (predicted) [Oryctolagus cuniculus]
Length = 856
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
H+ GF+SG L F FL FG KF Y +C + + LV + +
Sbjct: 773 HVSGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|190360185|sp|B0VX73.1|RHDF1_CALJA RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|167427357|gb|ABZ80332.1| rhomboid family 1 (predicted) [Callithrix jacchus]
Length = 855
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|183396440|gb|ACC62115.1| rhomboid family 1 (predicted) [Rhinolophus ferrumequinum]
Length = 856
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG L F FL Y + R +C + I V + +
Sbjct: 773 HISGFVSGLFLSFAFL---------------PYVSFGRFDLYRKRCQILIFQAVFLGLLA 817
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 818 GLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|156404290|ref|XP_001640340.1| predicted protein [Nematostella vectensis]
gi|156227474|gb|EDO48277.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 20/207 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H+L ++ I LE+ G+IR+ ++YI SG GG L+SA+ I
Sbjct: 292 QIYRLWMAIFLHAGIIHLLCTLVFNFTILRDLERMAGWIRISIIYIFSGIGGYLISAILI 351
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFA 248
+ VG SG++FG++ + ELI +W + L L ++ + L VG+LP+VDNFA
Sbjct: 352 PYQVEVGPSGSMFGIIACLFVELIQSWQMVAQPILALLKLCGVVFLLLVVGLLPYVDNFA 411
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GF GF L F+FL FG ++ +R++ + +V+ +VI+
Sbjct: 412 HMAGFCFGFCLAFIFLPYVTFGRFDR----------NRKR------VQILVAFAVVIIMY 455
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP 335
T+G ++ L C C YL+C+P
Sbjct: 456 TVGFIIFLEVQTTT--CYGCTYLNCIP 480
>gi|255728583|ref|XP_002549217.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
gi|240133533|gb|EER33089.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
Length = 680
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R+ +LH G HI+ N+L + +G +E+ G ++ ++YI+SG GG LL A F
Sbjct: 328 NQWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGILKYAIIYIVSGIGGFLLGANF 387
Query: 190 IQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHFLTLVVI----IAINLAVGI 240
I S GASGALFG++ + + I N +Y KH+ + I I I +G+
Sbjct: 388 TPQGIASTGASGALFGIVATNIILFIYTGRKNTNMYGTKHYALFICIMIAEIVITFVLGL 447
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------QRYALSGYSALSRRK 288
LP +DNF+H+GGF G L + L P + + + Q++ + +
Sbjct: 448 LPGLDNFSHLGGFAMGILTSILLLKDPFWVFKDGIITYPKNPSTWQQFKNNWNPLFAIED 507
Query: 289 FMTYQCILW----IVSLVLVIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTSRW 339
+ + I+W I +L L+IV L ++ + CSWC Y +C+P W
Sbjct: 508 KIKNRFIIWCHVRIAALSLIIVYYALLCKNFFNANLNQGNRCSWCRYFNCIPVKGW 563
>gi|395835625|ref|XP_003790777.1| PREDICTED: inactive rhomboid protein 1 [Otolemur garnettii]
Length = 856
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILVRPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|440895146|gb|ELR47408.1| Rhomboid family member 2 [Bos grunniens mutus]
Length = 846
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SALF+
Sbjct: 643 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 702
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 703 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 762
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSLV V GL
Sbjct: 763 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSLV-VFAGL 805
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 806 FASLVIWLYIYPI--HWPWVEYLTCFPFTSRFCEKYE 840
>gi|432843050|ref|XP_004065559.1| PREDICTED: inactive rhomboid protein 2-like [Oryzias latipes]
Length = 821
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H + +++ + I LE+ G+ R+ ++YI+SG G+L SALF+
Sbjct: 614 QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWGRISVIYILSGITGNLASALFL 673
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + ELI W I K FL L+ I+ G+LP +DN A
Sbjct: 674 PYRAEVGPAGSQFGLLACLFVELIQGWQILEKPWKAFLKLLGIVVFLFLCGLLPWIDNIA 733
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG F Y+ + IV +LV VGL
Sbjct: 734 HIFGFLSGLLLSFAFLPYIIFG-----------------TFDKYRKRIMIVISMLVYVGL 776
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
L++ N +W YL+C+P + C
Sbjct: 777 FASLIIWFYIYPIN--LNWLEYLTCLPLTSKFCE 808
>gi|403273152|ref|XP_003928385.1| PREDICTED: inactive rhomboid protein 1 [Saimiri boliviensis
boliviensis]
Length = 852
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 649 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 708
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 709 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 768
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 769 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 811
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 812 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 842
>gi|390471022|ref|XP_003734416.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Callithrix jacchus]
Length = 836
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 633 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 692
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 693 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 752
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 753 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 795
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 796 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 826
>gi|123479365|ref|XP_001322841.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121905694|gb|EAY10618.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 377
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
ENP+ GPS L MGA S V+ WR T +LH G H++ +L + R+E
Sbjct: 135 ENPMFGPSQEVLLLMGAKQAS-VILAGSWWRFFTSMFLHSGAIHLVI-ILIFAIFTSRVE 192
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
++ GF R ++++SG G++LS L + IS GASGA+FG +G + ++L W K
Sbjct: 193 RDTGFWRAFFVFLVSGMYGTILSCLLVPELISCGASGAIFGYIGLLFADLFAGWRSNPKK 252
Query: 224 --HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR-YALSG 280
LV + + + +G+ P +DNF +IGGFI G L + L FG E+ +
Sbjct: 253 GRDLGILVGLTVVGIILGLTPFIDNFNNIGGFIMGLLFALMLLPNLSFGSCERMCHGFIS 312
Query: 281 YSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWS 340
+ A F+ C LV R +D C +C ++C+ R
Sbjct: 313 FLAFPAMTFIFCVC-----------------LVGFYRSIDNVKWCPFCQRITCLNFGRNW 355
Query: 341 C 341
C
Sbjct: 356 C 356
>gi|444727239|gb|ELW67740.1| Inactive rhomboid protein 1 [Tupaia chinensis]
Length = 857
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 144 GVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALF 203
GV H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G+ F
Sbjct: 667 GVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQF 726
Query: 204 GLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
G+L + EL +W + + F L+ ++ A G+LP +DNFAHI GFISG L F
Sbjct: 727 GILACLFVELFQSWQVLARPWRAFFKLLAVVLSLFAFGLLPWIDNFAHISGFISGLFLSF 786
Query: 262 VFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDA 321
FL FG KF Y+ I+ +V + L GLV+L
Sbjct: 787 AFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLCLLAGLVVLFYFSPV 829
Query: 322 NDHCSWCHYLSCVPTSRWSC 341
C WC L+C+P + C
Sbjct: 830 R--CEWCELLTCIPFTDKFC 847
>gi|380488088|emb|CCF37613.1| rhomboid family protein [Colletotrichum higginsianum]
Length = 572
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 124/240 (51%), Gaps = 24/240 (10%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D+++ + +Q +R IT +LH G+ HI N+L + IG +E G IR L+Y+ +G
Sbjct: 324 DINQSPEPNQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIF 383
Query: 182 GSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ A + S GASGALFG++ L +L+ +W + K + +++ I I+ +
Sbjct: 384 GNVMGANYAGVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFILLDIVISFVL 443
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSA---------- 283
G+LP +DNFAHIGGF+ G LG L +R + G + YA +
Sbjct: 444 GLLPGLDNFAHIGGFLMGLALGVCVLHSPNSLRRKMGAEDPSYASMQLNPNQGPPHFLKN 503
Query: 284 ----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
RK + + W+V ++ + + +V+L ++ CSWC YLSC+P + W
Sbjct: 504 PVGFFKGRKPLWW--AWWLVRAGFLLTVVIVFIVLLNNFYIYHNTCSWCKYLSCIPVNNW 561
>gi|310792586|gb|EFQ28113.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 561
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 20/238 (8%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D+++ + +Q +R IT +LH G+ HI N+L + IG +E G IR L+Y+ +G
Sbjct: 313 DINQSPEPNQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEVAIGSIRFFLVYLSAGIF 372
Query: 182 GSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ A + S GASGALFG++ L +L+ +W + K + +++ + I+ +
Sbjct: 373 GNVMGANYAGVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDVVISFVL 432
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYAL------SGYSALSRR 287
G+LP +DNFAHIGGF+ G LG L +R + G + YA G +
Sbjct: 433 GLLPGLDNFAHIGGFLMGLALGVCVLHSPNSLRRRMGAEDPSYASMQLNPNQGPPPFLKN 492
Query: 288 KFMTYQC------ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
++ W+V ++ + + +V+L ++ CSWC YLSC+P + W
Sbjct: 493 PVGFFKGRKPLWWAWWLVRAGFLLTVIIVFIVLLNNFYIYHNTCSWCKYLSCIPVNNW 550
>gi|154276072|ref|XP_001538881.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413954|gb|EDN09319.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 548
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 38/253 (15%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y S
Sbjct: 285 GSLDDRP--EPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERAIGWWRYAVVYFAS 342
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G +L A F + I S GASG+LFG+ +L+ +W+ +N K L +++ IAI+
Sbjct: 343 GIFGFILGANFAPAGIASTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITIAIS 402
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL------------IRPQFGWVEQRYALSGYSA 283
+G+LP +DNF+HIGGF+ G +LG L I P + A A
Sbjct: 403 FVLGLLPGLDNFSHIGGFMVGLVLGISVLRSPDKLRKRIDSITPHHDPYDPLSASGALGA 462
Query: 284 L---------SRRKFMTYQCI-----------LWIVSLVLVIVGLTLGLVMLLRG-VDAN 322
+ FM Q + W V +VG+ + ++LL
Sbjct: 463 GAGAGGAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVIRAGTLVGILVAFILLLNNFYKYR 522
Query: 323 DHCSWCHYLSCVP 335
C WC YLSC+P
Sbjct: 523 STCGWCKYLSCLP 535
>gi|448535206|ref|XP_003870930.1| Rbd1 rhomboid-like protein [Candida orthopsilosis Co 90-125]
gi|380355286|emb|CCG24803.1| Rbd1 rhomboid-like protein [Candida orthopsilosis]
Length = 658
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 26/251 (10%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + D + +Q +R+ +LH G HI+ N+L L +G +E+ G ++ ++
Sbjct: 299 LSGLPTYDDGEKYAPNQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIGILKYAII 358
Query: 175 YIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELI----TNWTIYTNKHF---- 225
YI SG G LL A F I S GASGALFG++ + + I N +Y H+
Sbjct: 359 YIASGISGFLLGANFTPQGIASTGASGALFGIVATNIILFIYTGRKNTNMYGTTHYKLFI 418
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE------------ 273
++ I I+L +G+LP +DNF+H+GGF G L + L P + + +
Sbjct: 419 FFMICEIVISLVLGLLPGLDNFSHLGGFAMGILTAVLLLKDPFWVYKDGIITYTRDPTTW 478
Query: 274 QRYALSGYSALSRRKFMTYQCILW----IVSLVLVIVGLTLGLVMLLR-GVDANDHCSWC 328
Q++ + + + +LW +V+L L+IV L D++++C WC
Sbjct: 479 QQFVNNWNPMYAYEDKLQVPFLLWCGARVVALALIIVYFALLCKNFFNDNYDSSENCKWC 538
Query: 329 HYLSCVPTSRW 339
Y +C+P W
Sbjct: 539 KYFNCIPVKGW 549
>gi|443925758|gb|ELU44527.1| rhomboid family protein [Rhizoctonia solani AG-1 IA]
Length = 1236
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 54/322 (16%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSS--VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVF 146
C+A R P N P++ +++ + K D +Q +R IT +LH G+
Sbjct: 559 CIADIAVRALNHPAGFNNTANPATELCSVETLCGFGEFKGGDPNQWFRFITPIFLHAGII 618
Query: 147 HILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGL 205
H NM + L + ++E+E G +LY +G G++L F + SVGASGA+FG
Sbjct: 619 HFALNMFAQLTLSAQVEREMGSGAFLILYASAGIFGNVLGGNFALVGVPSVGASGAIFGT 678
Query: 206 LGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVF 263
+ M +L+ +W I + L V + I +A+G +P VDNFAH+GGF+ G L V
Sbjct: 679 VAVMWVDLLAHWKIEYRPGRKLAMLCVDLIIGVALGFVPGVDNFAHLGGFLMGLLTAIVL 738
Query: 264 LIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND 323
Y +S K ++ I+WI L ++ V + L V+L+R +D
Sbjct: 739 -----------------YPVISTTK--RHKAIMWICRLAMIPVAVVL-FVVLIRNFYTSD 778
Query: 324 ----------------------HCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTC 361
C WC YLSC+P W+ + + + T+ T
Sbjct: 779 PYAGALFPLGVVALSAHIFFIVACQWCRYLSCIPD--WNHNDDDDYLNWTR-----GCTV 831
Query: 362 SSNGKSNLYILSNPSSSQIQSL 383
+++G L P+ + +++
Sbjct: 832 NTHGTPRLAKFYTPTPANTRAV 853
>gi|426238434|ref|XP_004013158.1| PREDICTED: inactive rhomboid protein 2 [Ovis aries]
Length = 825
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SALF+
Sbjct: 622 QFYRLWLSLFLHAGVVHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W + K FL L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGILACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 741
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSLV V GL
Sbjct: 742 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSLV-VFAGL 784
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 785 FASLVIWLYVYPI--HWPWVEYLTCFPFTSRFCEKYE 819
>gi|346974557|gb|EGY18009.1| rhomboid family membrane protein [Verticillium dahliae VdLs.17]
Length = 567
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 24/240 (10%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D ++ + +Q +R IT +LH G+ HI NML + IG +E G +R L+Y +G
Sbjct: 304 DPNEKGEPNQWFRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIF 363
Query: 182 GSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ A + + S GASGALFG++ +L +W + K + +++ + I +
Sbjct: 364 GNVMGANYAGTGEASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVL 423
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSA---------- 283
G+LP +DNFAHIGGF+ G LG L +R + G+ ++G A
Sbjct: 424 GLLPGLDNFAHIGGFLMGLCLGICVLHSPNSLRRRLGYDTSYATVNGEGAQAGPVPFVKN 483
Query: 284 ----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
RK + + W+V +I+ + + +V+L ++ CSWC YLSC+P + W
Sbjct: 484 PTGFFKGRKPLWW--AWWLVRAAALILVIVVFIVLLNNFYVSHSTCSWCKYLSCLPVNGW 541
>gi|326430116|gb|EGD75686.1| hypothetical protein PTSG_07804 [Salpingoeca sp. ATCC 50818]
Length = 855
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 20/206 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R +LH G H+ +L + +E+ G+ RV +Y+ISG GG ++S LF
Sbjct: 645 QWYRFFLAIFLHAGGIHLFVVLLLQFSLLPDVERIAGWWRVAFIYMISGAGGFVISGLFS 704
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
+ ++VGASGA FG+L +++ EL+ +W L+VII + A+GILP+VDN++
Sbjct: 705 RYQVTVGASGANFGILAALVVELVQSWKFIERPGSELAKLIVIIVLAFAIGILPYVDNYS 764
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HIGGF+ G L FL FG ++ +++ ++ + IV+ +V+
Sbjct: 765 HIGGFLFGMLAALAFLPHITFGTRDK----------AKKHLLSILALGGIVAAFVVL--F 812
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCV 334
T+ + G CS+C YL+CV
Sbjct: 813 TIFYAATIPG------CSFCGYLNCV 832
>gi|149750980|ref|XP_001494786.1| PREDICTED: inactive rhomboid protein 1-like [Equus caballus]
Length = 856
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + V + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|410981852|ref|XP_003997280.1| PREDICTED: inactive rhomboid protein 2 [Felis catus]
Length = 824
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H +++ + I LE+ G+ R+ +++I+SG G+L SALF+
Sbjct: 621 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASALFL 680
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 681 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPWIDNIA 740
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 741 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 783
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 784 FASLVIWLYVYPV--HWPWIEYLTCFPFTSRFCEKYE 818
>gi|429852564|gb|ELA27696.1| rhomboid family membrane protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 606
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
L G V K LD S D Q +R IT +LH G+ HI N+L + IG +E
Sbjct: 343 LCGFGGVPEPKFEGLDQSPEPD--QWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAI 400
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTN--K 223
G IR L+Y+ +G G+++ A + S GASGALFG++ L +L+ +W + K
Sbjct: 401 GSIRFFLVYVSAGIFGNVMGANYAGVMTASTGASGALFGVIALTLLDLLYSWKDRRSPVK 460
Query: 224 HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL-----------IRPQFGWV 272
+ +++ I I+ +G+LP +DNFAHIGGF+ G LG L P + +
Sbjct: 461 DLMFIMLDIVISFVLGLLPGLDNFAHIGGFLMGLALGICVLHSPNSLRRRLGTDPSYASM 520
Query: 273 EQRYALSGYSALSRRK---FMTYQCIL----WIVSLVLVIVGLTLGLVMLLRGVDANDHC 325
+ A G R F + L W+V ++ + + +V+L ++ C
Sbjct: 521 QLNPANQGAGPSFLRNPVGFFKGRKPLWWAWWLVRAGFLLTVIIVFIVLLNNFYVYHNTC 580
Query: 326 SWCHYLSCVPTSRW 339
SWC YLSC+P + W
Sbjct: 581 SWCKYLSCIPVNNW 594
>gi|302421084|ref|XP_003008372.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
gi|261351518|gb|EEY13946.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
Length = 524
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 24/240 (10%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
D ++ + +Q +R IT +LH G+ HI NML + IG +E G +R L+Y +G
Sbjct: 261 DPNEKGEPNQWFRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIF 320
Query: 182 GSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G+++ A + + S GASGALFG++ +L +W + K + +++ + I +
Sbjct: 321 GNVMGANYAGTGEASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVL 380
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSA---------- 283
G+LP +DNFAHIGGF+ G LG L +R + G+ ++G A
Sbjct: 381 GLLPGLDNFAHIGGFLMGLCLGICVLHSPNSLRRRLGYDTSYATVNGEGAQAGPVPFVKN 440
Query: 284 ----LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
RK + + W+V +I+ + + +V+L ++ CSWC YLSC+P + W
Sbjct: 441 PTGFFKGRKPLWWA--WWLVRAAALILVIVVFIVLLNNFYVSHSTCSWCKYLSCLPVNGW 498
>gi|355709783|gb|EHH31247.1| p100hRho [Macaca mulatta]
Length = 855
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
H GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HTSGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>gi|134112822|ref|XP_774954.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257602|gb|EAL20307.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 532
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 23/212 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR I +LH G+ H++ NML +++ ++E+E G I ++Y++ G G +L F
Sbjct: 314 QWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLGGNFT 373
Query: 191 QSNI-SVGASGALFGLLGSMLSELITNWTIYTN---KHFLTLVVIIAINLAVGILPH-VD 245
++ I SVGASGALF +L +L+ +W K FL L + I A+G +P+ VD
Sbjct: 374 RTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFL-LFLEFVIGFAMGYIPNAVD 432
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
AH+GG+ G L G + + RRK++ + C +V+L L+I
Sbjct: 433 GLAHLGGWAMGILCGTIL--------------YPAITETKRRKYVIWGC--RVVALALII 476
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
+ + + + D N+ C WC YL+C+PTS
Sbjct: 477 MAMVMTIKNFYTD-DPNEACEWCKYLACIPTS 507
>gi|410902671|ref|XP_003964817.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 858
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YIISG G+L SA+F+
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 714
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 774
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ ++V +GL
Sbjct: 775 HISGFISGFFLSFAFLPYISFGRMD-----------------LYRKRCQIIVFLMVFLGL 817
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC L+C+P + C
Sbjct: 818 FSGLVVLFYVYPIK--CEWCELLTCIPFTDKFC 848
>gi|400602302|gb|EJP69904.1| rhomboid family protein [Beauveria bassiana ARSEF 2860]
Length = 517
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 26/242 (10%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G D + D Q +R I ++H G+ HI N+L L + +EQ G IR L+Y+ +
Sbjct: 271 GNADQNPAPD--QWYRFIIPIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSIRFFLVYMSA 328
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G ++ F I S GASG+LFG++ L +L+ +W+ + K + ++V + I
Sbjct: 329 GIFGFVMGGNFAAPGIASTGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIIVDMVIA 388
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG--YSAL--------- 284
+G+LP +DNF+HIGGF+ G LG L P +R G YSA+
Sbjct: 389 FVLGLLPGLDNFSHIGGFLMGLALGICVLHSPN---ALRRRLDEGMAYSAVQGGQGVHPP 445
Query: 285 ---SRRKFMTYQCIL----WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
S F + L WIV ++I + + +V+L D C WC YLSC+P
Sbjct: 446 FHKSPVGFFRGRKALWWAWWIVRAAVLITIIVVFIVLLNNFYKLGDQCGWCKYLSCLPIK 505
Query: 338 RW 339
W
Sbjct: 506 DW 507
>gi|410985425|ref|XP_003999023.1| PREDICTED: inactive rhomboid protein 1 [Felis catus]
Length = 856
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W + + F L ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|335297303|ref|XP_003131221.2| PREDICTED: inactive rhomboid protein 2-like [Sus scrofa]
Length = 827
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++++SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L ++ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVCGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 787 FASLVIWLYVYPI--HWPWIEYLTCFPFTSRFCEKYE 821
>gi|301769045|ref|XP_002919912.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 2-like
[Ailuropoda melanoleuca]
Length = 823
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++++SG G+L SA+F+
Sbjct: 620 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 679
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 680 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 739
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 740 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 782
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C+P TSR+ + E
Sbjct: 783 FASLVIWLYVYPIN--WPWVEYLTCLPFTSRFCEKYE 817
>gi|367037003|ref|XP_003648882.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
gi|346996143|gb|AEO62546.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
Length = 516
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 31/238 (13%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+Q +R IT ++H GV HI NML L +G +E+ G IR L+Y+ +G G +L
Sbjct: 272 PNQWFRFITPIFMHAGVIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGFVLGGN 331
Query: 189 FIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVD 245
F + I S GASGALFG++ L +L+ +W N + +V+ + I+ +G+LP +D
Sbjct: 332 FAATGIASTGASGALFGIIALTLLDLLYSWRDRVNPVRDLAFIVLDVVISFVLGLLPGLD 391
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQR------YALS----GYSALSRRK------- 288
NF+HIGGF+ G LG L P + +R YA S G +AL
Sbjct: 392 NFSHIGGFLMGLALGICVLHSPNS--LRRRIGDDVPYASSHVSRGSAALGTPPGFLQNPV 449
Query: 289 -FMTYQCILW-----IVSLVLVIVGLTLGLVMLLRGVD-ANDHCSWCHYLSCVPTSRW 339
F + LW I + LV+V T+ ++LL CSWC YLSC+P S W
Sbjct: 450 GFFKGRKPLWWAWWLIRAGALVVV--TVVFILLLNNFYIYRATCSWCKYLSCLPVSNW 505
>gi|296203262|ref|XP_002748805.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Callithrix
jacchus]
Length = 857
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ A G+LP +DN A
Sbjct: 714 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 774 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
GLV+ L N W +L+C P TSR+ + E
Sbjct: 817 FAGLVLWLYIYPFN--WPWIEHLTCFPFTSRFCEKYE 851
>gi|441659440|ref|XP_004091347.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Nomascus leucogenys]
Length = 855
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEVLTCIPFTDKFC 845
>gi|18463968|gb|AAL73049.1| C16ORF8 [Sphoeroides nephelus]
Length = 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YIISG G+L SA+F+
Sbjct: 570 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 629
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 630 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 689
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ +LV VGL
Sbjct: 690 HISGFISGFFLSFAFLPYISFGRMD-----------------LYRKRCQIIVFLLVFVGL 732
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GL +L C WC L+C+P + C
Sbjct: 733 FSGLAVLFYVYPIK--CDWCELLTCIPFTDKFC 763
>gi|409083166|gb|EKM83523.1| hypothetical protein AGABI1DRAFT_110173 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 493
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
D Q +R IT +LH G+ H L NML + ++E+E G + Y +G G++L
Sbjct: 280 DPSQWFRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFAAGIFGNVLGG 339
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
F I SVGASGA+ G L +LI +W + + + + + + I++A+G +P+V
Sbjct: 340 NFALVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLISIAIGYIPYV 399
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
DNFAHIGGF+ G +G VF Y +S K ++ I W L +
Sbjct: 400 DNFAHIGGFVMGLFVGIVF-----------------YPIISVTK--RHRIISWTFKLAAI 440
Query: 305 IVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
+ + L V+L R +D C+ C YLSC+PTS
Sbjct: 441 PLAVIL-FVVLTRNFYTSDPYAACTGCRYLSCIPTS 475
>gi|403280496|ref|XP_003931753.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 857
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ A G+LP +DN A
Sbjct: 714 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 774 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
GLV+ L N W +L+C P TSR+ + E
Sbjct: 817 FAGLVLWLYIYPFN--WPWIEHLTCFPFTSRFCEKYE 851
>gi|392573734|gb|EIW66872.1| hypothetical protein TREMEDRAFT_34153 [Tremella mesenterica DSM
1558]
Length = 528
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ Q WR + +LH G+ H+L NM + + IG ++E+E G I ++Y+ G G +L
Sbjct: 305 EPDQSWRFVLPIFLHVGIIHLLLNMAAQVTIGAQIEREMGTIPFLMVYMAGGIYGFVLGG 364
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA--INLAVGILPH- 243
F ++ I SVGASGALF + + +L +W +++I + +A+G +P+
Sbjct: 365 NFSRTGIPSVGASGALFAINACVTVDLGLHWKYEPRPKLKAFLLLIEFCVGIAIGYIPNA 424
Query: 244 VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILW---IVS 300
VD AH+GGF G L+G + Y ++S K +++ ++W +++
Sbjct: 425 VDGLAHLGGFAMGLLMGIIL-----------------YPSISETK--SHRNVVWTLRLLA 465
Query: 301 LVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
L L+IV L + D N C WC +LSC+PTS
Sbjct: 466 LPLIIVAFVL-TIRNFYTADPNAACEWCRFLSCIPTS 501
>gi|344291132|ref|XP_003417290.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Loxodonta
africana]
Length = 827
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + ELI +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
LV+ L N W YL+C P + C
Sbjct: 787 FTSLVIWLYVYPIN--WPWVEYLTCFPFTSHFCE 818
>gi|321259830|ref|XP_003194635.1| hypothetical protein CGB_F1590W [Cryptococcus gattii WM276]
gi|317461107|gb|ADV22848.1| hypothetical protein CNBF1190 [Cryptococcus gattii WM276]
Length = 530
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 29/215 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR I +LH G+ H++ NML + ++E+E G I ++Y++ G G +L F
Sbjct: 312 QWWRFILPIFLHVGIIHLIINMLVQITASAQVEREMGTIPFLIVYMLGGIYGFVLGGNFT 371
Query: 191 QSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLT---LVVIIAINLAVGILPH-VD 245
++ I SVGASGALF +L +L+ +W Y + L LV+ + I A+G +P+ VD
Sbjct: 372 RTGIPSVGASGALFATNACVLVDLVLHWK-YEERPKLKACLLVLELGIGFAMGYIPNAVD 430
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
AH+GG+ G L G + + RRK++ + C + V+L++
Sbjct: 431 GLAHLGGWAMGILCGIIL--------------YPAITETKRRKYVVWGCRVVAVALII-- 474
Query: 306 VGLTLGLVMLLRGV---DANDHCSWCHYLSCVPTS 337
+ +VM ++ D N C WC YLSC+PTS
Sbjct: 475 ----MAMVMTIKNFYTDDPNKACEWCKYLSCIPTS 505
>gi|344291130|ref|XP_003417289.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Loxodonta
africana]
Length = 860
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 657 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 716
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + ELI +W + K FL L I+ G+LP +DN A
Sbjct: 717 PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPWIDNIA 776
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 777 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 819
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
LV+ L N W YL+C P + C
Sbjct: 820 FTSLVIWLYVYPIN--WPWVEYLTCFPFTSHFCE 851
>gi|116829774|ref|NP_001070906.1| inactive rhomboid protein 2 [Canis lupus familiaris]
gi|122131675|sp|Q00M95.1|RHDF2_CANFA RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6
gi|85717756|gb|ABC74872.1| rhomboid veinlet-like 6 isoform 1 [Canis lupus familiaris]
Length = 827
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>gi|403280494|ref|XP_003931752.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 828
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ A G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 744
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 745 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 787
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
GLV+ L N W +L+C P TSR+ + E
Sbjct: 788 FAGLVLWLYIYPFN--WPWIEHLTCFPFTSRFCEKYE 822
>gi|296203260|ref|XP_002748804.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Callithrix
jacchus]
Length = 828
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ A G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 744
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 745 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 787
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
GLV+ L N W +L+C P TSR+ + E
Sbjct: 788 FAGLVLWLYIYPFN--WPWIEHLTCFPFTSRFCEKYE 822
>gi|149723286|ref|XP_001493344.1| PREDICTED: inactive rhomboid protein 2-like [Equus caballus]
Length = 827
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>gi|322693699|gb|EFY85550.1| Rhomboid family protein [Metarhizium acridum CQMa 102]
Length = 500
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 153/363 (42%), Gaps = 88/363 (24%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G ++ KK + W+ F V +A+F+ + KN + + + + F NP++
Sbjct: 152 GMLRSDKKRIPWVCYVFTVVQVAVFIGEII-----KNGMLTGSPIMIKPQF-----NPMI 201
Query: 109 GPSSVTLQKMGAL----------------------------------------------- 121
GPS+ L MGA
Sbjct: 202 GPSTQVLINMGARYVPCMHNVKEIQGSSIPVLFLCPNATRSDQFCPLSEVCGFGGVPNPT 261
Query: 122 --DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
+ ++ +Q +R I +LH G+ HI NML + + +EQ G +R L+Y+ +G
Sbjct: 262 FNNANQSPQPNQWFRFIVPIFLHAGLIHIGFNMLLQMTLAKEMEQAIGSVRFFLVYLSAG 321
Query: 180 FGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINL 236
G ++ F I S GASG+LFG++ L +L +WT N K + +++ I I+
Sbjct: 322 IFGFVMGGNFAAPGIASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILDIVISF 381
Query: 237 AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG-----YSALSRRKFMT 291
+G+LP +DNF+HIGGF+ G LG L P R + G YSA++ T
Sbjct: 382 VLGLLPGLDNFSHIGGFLMGLALGVCLLHSPN----ALRRKIDGSDSTSYSAVNTSGDDT 437
Query: 292 YQCIL-----------------WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
L W+V +I + + +V+L + + CSWC YLSC+
Sbjct: 438 APGFLKSPIGFFKGRKPLWWAWWLVRAGFLIAVIIVFIVLLNNFYNGSHSCSWCKYLSCL 497
Query: 335 PTS 337
T+
Sbjct: 498 TTA 500
>gi|260824301|ref|XP_002607106.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
gi|229292452|gb|EEN63116.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
Length = 1084
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H+L +++ + I LE+ G+ R+ ++YI+SG GG+L SA+F+
Sbjct: 876 QFYRLWTSLFLHAGLVHLLLSVIFQMTILRDLEKLAGWGRIAIIYILSGIGGNLASAVFL 935
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA FG++ + E+ +W + + L L +I+ + +G+LP +DNFA
Sbjct: 936 PYQAEVGPAGAHFGVIACLFVEVFQSWQMLQAPWRAILKLSIIVLVLFLLGLLPWIDNFA 995
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFI G LL F FL FG ++ +R++ I IVS +L +
Sbjct: 996 HITGFICGILLSFSFLPYITFGAFDK----------NRKR------IQIIVSFLLFVAFF 1039
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ GLV+L D C C Y++C+P + C+ +
Sbjct: 1040 S-GLVVLFYVRPLTD-CQGCEYVNCIPFDKTFCKYQ 1073
>gi|355716411|gb|AES05601.1| rhomboid 5-like protein 2 [Mustela putorius furo]
Length = 646
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 124/265 (46%), Gaps = 23/265 (8%)
Query: 84 KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLH 142
K S R F F E L L K+ G L Q +RL +LH
Sbjct: 396 KGSCEITTREFCEFMHGYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLSLFLH 455
Query: 143 GGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGAL 202
GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+ VG +G+
Sbjct: 456 AGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQ 515
Query: 203 FGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLG 260
FGLL + EL +W + K FL L ++ G+LP +DN AHI GF+SG LL
Sbjct: 516 FGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFICGLLPWIDNIAHIFGFLSGLLLA 575
Query: 261 FVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVD 320
F FL Y G S R++ L +VSL LV GL LV+ L
Sbjct: 576 FAFL----------PYITFGTSDKYRKR------ALILVSL-LVFAGLFASLVIWLYVYP 618
Query: 321 ANDHCSWCHYLSCVP-TSRWSCRTE 344
H W YL+C+P TSR+ + E
Sbjct: 619 I--HWPWIEYLTCLPFTSRFCEKYE 641
>gi|299470381|emb|CBN78430.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 403
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
NPLLGPS TL +GA ++ ++ + Q WRL+T LHGGV HI N+ S +G L
Sbjct: 202 DSNPLLGPSIETLMALGAKHLT-LIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFL 260
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT---- 218
E+ +G ++Y + G GG+LLS + + VGASGA++ ++G+ LS ++ W
Sbjct: 261 EERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDE 320
Query: 219 IYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRP 267
+V+ + +A + P VD AH+GG ++G L+G+ +P
Sbjct: 321 FAKGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKP 369
>gi|58268562|ref|XP_571437.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227672|gb|AAW44130.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 422
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q WR I +LH G+ H++ NML +++ ++E+E G I ++Y++ G G +L F
Sbjct: 184 DQWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLGGNF 243
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWTIYTN---KHFLTLVVIIAINLAVGILPH-V 244
++ I SVGASGALF +L +L+ +W K FL L + I A+G +P+ V
Sbjct: 244 TRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFL-LFLEFVIGFAMGYIPNAV 302
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
D AH+GG+ G L G + + RRK++ + C +V+L L+
Sbjct: 303 DGLAHLGGWAMGILCGTIL--------------YPAITETKRRKYVIWGCR--VVALALI 346
Query: 305 IVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
I+ + + + D N+ C WC YL+C+PTS
Sbjct: 347 IMAMVMTIKNFYTD-DPNEACEWCKYLACIPTS 378
>gi|295661783|ref|XP_002791446.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280003|gb|EEH35569.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 521
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 119/256 (46%), Gaps = 34/256 (13%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y SG G
Sbjct: 265 IKQKPEPNQWFRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFG 324
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+L A F S I S GASG L G+L +L W + +++ IAI+ +G
Sbjct: 325 FILGANFASSGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLG 384
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRP----QFGWVEQRYA---LSG------------ 280
+LP +DNF+HIGGF+ G +LG L P + G Y SG
Sbjct: 385 LLPGLDNFSHIGGFLVGLVLGISLLRSPDRLRRIGAAGDPYEPVVASGALIEDGVESKKK 444
Query: 281 --------YSALSRRKFMTYQCILWIVSLVL---VIVGLTLGLVMLLRG-VDANDHCSWC 328
+ A KF T + LW V ++ +VG+ + ++LL C WC
Sbjct: 445 KKKKKKNKFMATKPVKFFTGRKPLWWVWWLVRAGTLVGIVIAFILLLNNFYKYRSKCGWC 504
Query: 329 HYLSCVPTSRWSCRTE 344
YLSC+P+ C T
Sbjct: 505 KYLSCLPSVFRLCDTR 520
>gi|169775935|ref|XP_001822434.1| DHHC zinc finger membrane protein [Aspergillus oryzae RIB40]
gi|83771169|dbj|BAE61301.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 518
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 146/345 (42%), Gaps = 70/345 (20%)
Query: 45 PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPK---NSVSCVARFLGRFSFQP 101
P+ Y +I ++ PC + ++ CP N++ C L F P
Sbjct: 175 PSAYIQINMGARYA----PCMKNVDKVQNSPVDFLMPCPNSTTNALECTLSELCGFGGVP 230
Query: 102 FKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIR 161
NP LG G+LD + +Q +R I +LHGG HI N+L + +G+
Sbjct: 231 ---NPHLG---------GSLDDQP--EPNQWYRFIVPIFLHGGFIHIGFNLLCQMTMGVD 276
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIY 220
+E+ G+ R GL+Y SG G +L + S G SGALFG+L + +L W
Sbjct: 277 MERMVGWWRYGLVYFASGIWGFVLGGNYAAPFQPSSGCSGALFGILALFILDLFYTWKER 336
Query: 221 TNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVE 273
+ + +V+ + I+ +G+LP +DNF+HIGGFI G LG + +R + G
Sbjct: 337 PSPFVELIIMVLGVGISFVLGLLPGLDNFSHIGGFIMGLALGLCIMRSPNALRERIGLAR 396
Query: 274 QRY-ALSGYSALSRRK-------------------------------FMTYQCILWIV-- 299
Y A+SG + + F + LW
Sbjct: 397 NPYVAMSGGAGPTSDDENKTTTGPSFVNLFKGRTGPNSSSETAGPLGFFKGRKPLWWAWW 456
Query: 300 -----SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+LV VIVG L +V + +N CSWC+ LSC+P W
Sbjct: 457 LVRAGALVAVIVGFILLIVNFYKYPKSN--CSWCYRLSCLPVHDW 499
>gi|238502587|ref|XP_002382527.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|220691337|gb|EED47685.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|391871078|gb|EIT80244.1| Rhomboid family protein [Aspergillus oryzae 3.042]
Length = 518
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 146/345 (42%), Gaps = 70/345 (20%)
Query: 45 PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPK---NSVSCVARFLGRFSFQP 101
P+ Y +I ++ PC + ++ CP N++ C L F P
Sbjct: 175 PSAYIQINMGARYA----PCMKNVDKVQNSPVDFLMPCPNSTTNALECTLSELCGFGGVP 230
Query: 102 FKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIR 161
NP LG G+LD + +Q +R I +LHGG HI N+L + +G+
Sbjct: 231 ---NPHLG---------GSLDDQP--EPNQWYRFIVPIFLHGGFIHIGFNLLCQMTMGVD 276
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIY 220
+E+ G+ R GL+Y SG G +L + S G SGALFG+L + +L W
Sbjct: 277 MERMVGWWRYGLVYFASGIWGFVLGGNYAAPFQPSSGCSGALFGILALFILDLFYTWKER 336
Query: 221 TNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVE 273
+ + +V+ + I+ +G+LP +DNF+HIGGFI G LG + +R + G
Sbjct: 337 PSPFVELIIMVLGVGISFVLGLLPGLDNFSHIGGFIMGLALGLCIMRSPNALRERIGLAR 396
Query: 274 QRY-ALSGYSALSRRK-------------------------------FMTYQCILWIV-- 299
Y A+SG + + F + LW
Sbjct: 397 NPYVAMSGGAGPTSDDENKTTTGPSFVNLFKGRTGPNSSSETAGPLGFFKGRKPLWWAWW 456
Query: 300 -----SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+LV VIVG L +V + +N CSWC+ LSC+P W
Sbjct: 457 LVRAGALVAVIVGFILLIVNFYKYPKSN--CSWCYRLSCLPVHDW 499
>gi|148234897|ref|NP_001090673.1| inactive rhomboid protein 2 [Xenopus (Silurana) tropicalis]
gi|193806414|sp|A0JPA1.1|RHDF2_XENTR RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2
gi|117558553|gb|AAI27322.1| rhbdf2 protein [Xenopus (Silurana) tropicalis]
Length = 826
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H +++ + + LE+ G++R+ ++YI+SG G+L SALF+
Sbjct: 623 QFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALFL 682
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W I K FL L+ I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLPWIDNIA 742
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG ++ R++ M I+SL LV VGL
Sbjct: 743 HIFGFLSGLLLSFSFLPYITFGTADK----------FRKRAMI------IISL-LVFVGL 785
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
LV+ L N +W YL+C+P + C
Sbjct: 786 FASLVIWLYVYPIN--WAWIEYLTCLPFTNKFCE 817
>gi|198415237|ref|XP_002121328.1| PREDICTED: similar to C16ORF8, partial [Ciona intestinalis]
Length = 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 21/230 (9%)
Query: 115 LQKMGALDVSKVVDK-HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
+Q L +V DK Q +RL LH G+ H L +++ + + +E+ G++R+G+
Sbjct: 175 MQDTCGLIPFRVADKPDQIYRLWLPVMLHAGILHCLVSVVFQMTVLRDMEKLAGWLRIGI 234
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVI 231
+YI SG G+ SA+F+ VG +G+ FG+L + E++ +W + + + LV I
Sbjct: 235 IYIFSGITGNFASAIFLPYRAEVGPAGSHFGILACLFVEVLQSWQLLKSPLRALFKLVAI 294
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMT 291
+ G LP +DNFAHI GFISG LL FV L F +F
Sbjct: 295 TTVLFVFGALPWIDNFAHIFGFISGLLLSFVLLPYITFN-----------------RFDR 337
Query: 292 YQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++ + +V+ + +GL L D CS C Y++C+P + C
Sbjct: 338 HRKRIQVVTCSALFIGLLTALFFFYYIHPITD-CSVCRYINCIPFNEDFC 386
>gi|301769557|ref|XP_002920196.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 1-like
[Ailuropoda melanoleuca]
Length = 855
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 655 RLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYR 714
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
VG +G+ FG+L + EL +W + + F L ++ G+LP +DNFAHI
Sbjct: 715 AEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFAHIS 774
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIVGLT 309
GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 775 GFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQILVFQVVFLGLLAG 817
Query: 310 LGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 818 LVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>gi|357580551|sp|C8VCL5.1|Y0929_EMENI RecName: Full=Uncharacterized rhomboid protein AN10929
gi|259483309|tpe|CBF78591.1| TPA: rhomboid family membrane protein (AFU_orthologue;
AFUA_2G16490) [Aspergillus nidulans FGSC A4]
Length = 503
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 42/259 (16%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD D Q +R I +LH G HI N+L + +G +E+ G+ R GL+Y+ S
Sbjct: 240 GSLDDKPAPD--QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSS 297
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W N + +V+ IA++
Sbjct: 298 GIWGFVLGGNYAGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVS 357
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA------------- 277
+G+LP +DNF+H+GGF G LG + +R + G Y
Sbjct: 358 FVLGLLPGLDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADP 417
Query: 278 ----------LSGYSALSRRKFMTYQCILW-------IVSLVLVIVGLTLGLVMLLRGVD 320
+ G + + F + LW + +LV V++G L +V +
Sbjct: 418 DQNKTSTGSNIGGLGKFNPKGFFAGRKPLWWAWWLVRLGALVAVLIGFILLIVNFYKYPS 477
Query: 321 ANDHCSWCHYLSCVPTSRW 339
+N CSWC+ SC+P + W
Sbjct: 478 SN--CSWCYRFSCLPVNGW 494
>gi|431908742|gb|ELK12334.1| Rhomboid family member 2 [Pteropus alecto]
Length = 847
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H +++ + + LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 644 QFYRLWLSLFLHAGVVHCFVSIIFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIFL 703
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 704 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPWIDNIA 763
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 764 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 806
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L H W YL+C P TSR+ + E
Sbjct: 807 FASLVIWLYVYPI--HWPWIEYLTCFPFTSRFCEKYE 841
>gi|126335253|ref|XP_001364793.1| PREDICTED: rhomboid family member 1-like [Monodelphis domestica]
Length = 857
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFFKLLAVVLFLFTFGLLPWIDNFA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
GFIS F FL FG KF Y+ I+ ++ +GL
Sbjct: 774 TSLGFISAFFSPCPFLPYISFG-----------------KFDLYRKRCQIIVFQIIFLGL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC +L+C+P + C
Sbjct: 817 LSGLVILFYFYPIR--CEWCEFLTCIPFTDKFC 847
>gi|410896139|ref|XP_003961557.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 847
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 140 WLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGAS 199
+LH G+ H L ++ + + +E+ G++RV ++Y++SG G+L S++F+ VG +
Sbjct: 653 FLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIFLPYRAEVGPA 712
Query: 200 GALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGF 257
G+ FG+L + EL +W I + L+ I + G+LP +DNFAHI GF+SGF
Sbjct: 713 GSQFGILACLFVELFQSWQILERPWRALGKLLAISTFLFSFGLLPWIDNFAHICGFVSGF 772
Query: 258 LLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
L F FL Y G S + R++ L I +LV +GL LV+L
Sbjct: 773 FLSFTFLP----------YISFGRSDMYRKR-------LQICVFLLVFLGLLATLVVLFY 815
Query: 318 GVDANDHCSWCHYLSCVPTSRWSC 341
C WC YL+C+P + C
Sbjct: 816 VYPVK--CDWCEYLTCIPITEMFC 837
>gi|348551344|ref|XP_003461490.1| PREDICTED: inactive rhomboid protein 2-like [Cavia porcellus]
Length = 824
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 621 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 680
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 681 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLFAIVLFLFICGLLPWIDNIA 740
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ +L +VSL LV GL
Sbjct: 741 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------VLILVSL-LVFAGL 783
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
LV+ L N W YL+C P + C
Sbjct: 784 FAALVLWLYIYPIN--LPWIEYLTCFPFTSHFCE 815
>gi|290982897|ref|XP_002674166.1| predicted protein [Naegleria gruberi]
gi|284087754|gb|EFC41422.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
NP +GPSS TL +GA K+ ++Q WRL T +H G H+ N+ ++I + E
Sbjct: 219 SNPSIGPSSSTLLLLGAKSAYKIKKEYQLWRLFTPLIMHAGFLHLFMNLFVQVMICMGYE 278
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW-TIYTN 222
+ + + RV +YII+G GG+LLS + + ++SVGASGA+ GL+G+ ++ +I W I T
Sbjct: 279 KTWKWYRVLPIYIIAGVGGNLLSCVALPDSVSVGASGAIMGLIGAKVANIIIRWKKIPTQ 338
Query: 223 KHFLTLV---VIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
+ + II I L +VD H+GG + GF++GF
Sbjct: 339 PKIMQCISVGFIIVITLLWSFSDYVDYAGHLGGLMCGFIIGF 380
>gi|451821413|ref|YP_007457614.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787392|gb|AGF58360.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 332
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F L + L GA + ++DK Q WRL+TC +LH G+ HI NM SL
Sbjct: 155 FLITAFLSGSLFDIDTKVLLDYGA-KYNALIDKGQVWRLLTCAFLHSGLIHIACNMYSLY 213
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
+IG ++EQ +G ++ ++YI+S S LS +ISVGASGA+FGL+G++L+
Sbjct: 214 IIGPQIEQIYGTLKYLIIYIVSSITASALSYFMSPDSISVGASGAIFGLMGALLAFAFIE 273
Query: 217 WTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHI 250
K+ +L+ +I INL +G+ + ++DNFAHI
Sbjct: 274 RNKIQKKYMSSLMQVIIINLFIGLSISNIDNFAHI 308
>gi|226822866|gb|ACO83098.1| rhomboid family 1 (predicted) [Dasypus novemcinctus]
Length = 856
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W + + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLAVVLSLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + + V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
L ++ + V C WC L+C+P
Sbjct: 816 LAGLVVLFYVYPV----RCEWCELLTCIP 840
>gi|359414482|ref|ZP_09206947.1| Rhomboid family protein [Clostridium sp. DL-VIII]
gi|357173366|gb|EHJ01541.1| Rhomboid family protein [Clostridium sp. DL-VIII]
Length = 332
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F + + L GA ++ ++D + WRL+TC +LH G+ HI+ NM SL
Sbjct: 155 FLLTAFISGNIFDIDTRVLIYFGA-KINILIDHGEIWRLLTCAFLHSGLIHIVCNMYSLY 213
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
+IG ++EQ +G + ++Y+IS S+ S + I++GASG +FGL+G++L+ +
Sbjct: 214 IIGPQIEQIYGIRKYLIIYLISCITASISSYFLNPNGIAIGASGGIFGLMGALLAFALIE 273
Query: 217 WTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV--FLIRPQ 268
K +L+ IIAINL +G+ + ++DNFAHIGG + G + G++ L+R +
Sbjct: 274 RNRIQKKFLSSLLQIIAINLFIGLSIKNIDNFAHIGGLVGGIVSGYISYILVRKR 328
>gi|449669475|ref|XP_002160443.2| PREDICTED: inactive rhomboid protein 1-like [Hydra magnipapillata]
Length = 733
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 20/226 (8%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G L K Q +RL +LH G+ H++ ++ I +E G++R L+Y++S
Sbjct: 512 GLLPFVKQDQPDQIYRLWLSLFLHAGILHLVIVLIFNFTILQDIELMAGWLRTALIYLLS 571
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINL 236
G GGSL S++ + + VG SG+ FG++ + E I +W +Y F L ++ +
Sbjct: 572 GIGGSLWSSILLPYSPEVGPSGSCFGIIACLFVEYIQSWQLYKTPWIGFFKLCGLVLVLF 631
Query: 237 AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCIL 296
+G+LP++DNFAHI GF+ GFLL +FL FG ++R R+K I
Sbjct: 632 LIGLLPYIDNFAHIFGFVYGFLLSIIFLPYITFGDWDRR----------RKK------IQ 675
Query: 297 WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
V++V++ + T+G ++ + + H + + +C+P + C+
Sbjct: 676 IAVAIVILFIITTVGFILFYKVQEF--HSAAITFFNCIPITDNFCK 719
>gi|326473553|gb|EGD97562.1| rhomboid family membrane protein [Trichophyton tonsurans CBS
112818]
gi|326480224|gb|EGE04234.1| rhomboid family membrane protein [Trichophyton equinum CBS 127.97]
Length = 497
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y S
Sbjct: 238 GSLDDEP--EPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSS 295
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L F I S GASG LFG+ + +L W +V+ +AI+
Sbjct: 296 GIFGFVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAIS 355
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSAL--SRRK 288
+G+LP +DNF+HIGGF++G +LG L +R + G ++ G + ++K
Sbjct: 356 FVLGLLPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNLGVDEDQKK 415
Query: 289 FMTYQCIL----------WIVSLVLVIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTS 337
F W + ++G+ + ++LL CSWC YLSC+P S
Sbjct: 416 FFKQPVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTTCSWCKYLSCLPIS 475
Query: 338 RW 339
W
Sbjct: 476 NW 477
>gi|29568120|gb|AAO61491.1| C16orf8-like protein [Takifugu rubripes]
Length = 855
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 140 WLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGAS 199
+LH G+ H L ++ + + +E+ G++RV ++Y++SG G+L S++F+ VG +
Sbjct: 661 FLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIFLPYRAEVGPA 720
Query: 200 GALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGF 257
G FG+L + EL NW + F L+ I + G+LP +DNF HI GF+SGF
Sbjct: 721 GNQFGILACLKEELFQNWQNLERPWRAFGKLLAISTFLFSFGLLPWIDNFGHICGFVSGF 780
Query: 258 LLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
L F FL Y G S + R++ L I +LV +GL LV+L
Sbjct: 781 FLSFTFLP----------YISFGRSDMYRKR-------LQICVFLLVFLGLLATLVVLFY 823
Query: 318 GVDANDHCSWCHYLSCVPTSRWSC 341
C WC YL+C+P + C
Sbjct: 824 VYPVK--CDWCEYLTCIPITEMFC 845
>gi|395532997|ref|XP_003768550.1| PREDICTED: inactive rhomboid protein 2 [Sarcophilus harrisii]
Length = 827
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++L + I LE+ G++R+ +++I+SG G+L SA+F+
Sbjct: 623 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWLRIAIIFILSGITGNLASAIFL 682
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + ELI +W + K FL L I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGILACLFVELIQSWQLLEKPWKAFLNLSGIVFFLFICGLLPWIDNIA 742
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G R++ M +VSLV + GL
Sbjct: 743 HIFGFLSGLLLSFAFLP----------YITFGTGDKYRKRAMI------LVSLV-IFAGL 785
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 786 FASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYE 820
>gi|296416368|ref|XP_002837852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633736|emb|CAZ82043.1| unnamed protein product [Tuber melanosporum]
Length = 551
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 112/243 (46%), Gaps = 31/243 (12%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R IT +LH G+ HI NML L +G +E++ G +R ++Y +G G +
Sbjct: 271 EPNQWYRFITPIFLHAGLIHIAFNMLVQLKLGTEMERDIGHLRFAIVYFAAGIFGFVFGG 330
Query: 188 LFIQS-NISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAINLAVGILPHV 244
F + S G SG+LFG+ ML +L+ W K L+V I I +G+LP +
Sbjct: 331 NFAPNGQPSTGCSGSLFGIFALMLLDLLWTWGSRKSPKKDLAFLLVEIIICFVIGLLPGL 390
Query: 245 DNFAHIGGFISGFLLGFVFL-----IRPQFGWVE----------QRYALSGYSAL----- 284
DNF+HIGGF+ G LG L IR + G E YA + +S L
Sbjct: 391 DNFSHIGGFLMGLFLGLTVLHSPPSIRQKIGAGEPPYTPMTTNRPPYAANPHSTLPGGFG 450
Query: 285 ----SRRKFMTYQCIL----WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPT 336
+ F + L W+V + L + +V++ C WC YLSC+P
Sbjct: 451 GFLKNPAGFFKGRKPLWWAWWLVRAATLATALIVMVVLINNFYKYKKTCGWCKYLSCLPV 510
Query: 337 SRW 339
W
Sbjct: 511 LNW 513
>gi|126308402|ref|XP_001368925.1| PREDICTED: rhomboid family member 2-like isoform 1 [Monodelphis
domestica]
Length = 827
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++L + I LE+ G+ R+ +++I+SG G+L S +F+
Sbjct: 624 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + ELI +W + N K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELIQSWQLLENPWKAFLNLSGIVFFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G R++ M +VSLV + GL
Sbjct: 744 HIFGFLSGLLLSFAFLP----------YITFGTGDKYRKRAMI------LVSLV-IFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>gi|346327128|gb|EGX96724.1| rhomboid family membrane protein [Cordyceps militaris CM01]
Length = 601
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 28/238 (11%)
Query: 127 VDKH----QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
D+H Q +R I ++H G+ HI N+L L + +EQ G +R L+Y+ +G G
Sbjct: 357 ADQHPAPDQWYRFIIPIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSVRFFLVYMSAGIFG 416
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++ F I S GASG+LFG++ L +L+ +W+ + K + +++ + I +G
Sbjct: 417 FVMGGNFAAPGIASTGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIILDMVIAFVLG 476
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG--YSAL------------S 285
+LP +DNF+HIGGF+ G LG L P +R G YSA+ S
Sbjct: 477 LLPGLDNFSHIGGFLMGLALGICVLHSPN---ALRRRLDEGTTYSAVQGGTGVHPAFLKS 533
Query: 286 RRKFMTYQCIL----WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
F + L WIV ++I + + +V+L + C WC YLSC+P W
Sbjct: 534 PVGFFKGRKPLWWAWWIVRAAVLITIIAVFIVLLNNFYKLGEQCGWCKYLSCLPIKDW 591
>gi|327300028|ref|XP_003234707.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
gi|326463601|gb|EGD89054.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
Length = 497
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y S
Sbjct: 238 GSLDDKP--EPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSS 295
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L F I S GASG LFG+ + +L W +V+ +AI+
Sbjct: 296 GIFGFVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAIS 355
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSAL--SRRK 288
+G+LP +DNF+HIGGF++G +LG L +R + G ++ G + ++K
Sbjct: 356 FVLGLLPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNFGVDEDQKK 415
Query: 289 FMTYQCIL----------WIVSLVLVIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTS 337
F W + ++G+ + ++LL CSWC YLSC+P S
Sbjct: 416 FFKQPVSFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTTCSWCKYLSCLPIS 475
Query: 338 RW 339
W
Sbjct: 476 NW 477
>gi|109118388|ref|XP_001104817.1| PREDICTED: rhomboid family member 2-like isoform 2 [Macaca mulatta]
Length = 856
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|315042361|ref|XP_003170557.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
gi|311345591|gb|EFR04794.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
Length = 498
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y S
Sbjct: 239 GSLDDKP--EPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSS 296
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L F I S GASG LFG+ + +L W + +++ +AI+
Sbjct: 297 GIFGFVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAIS 356
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKFM 290
+G+LP +DNF+HIGGF++G +LG L +R + G ++ G +
Sbjct: 357 FVLGLLPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNVGADEDQKK 416
Query: 291 TYQCIL------------WIVSLVLVIVGLTLGLVMLLRGV-DANDHCSWCHYLSCVPTS 337
Y+ + W + ++G+ + ++L+ CSWC YLSC+P S
Sbjct: 417 FYKQPVSFFQGRKPLWWGWWLLRAGALIGIIVSFIVLINNFYKYRTTCSWCKYLSCLPIS 476
Query: 338 RW 339
W
Sbjct: 477 NW 478
>gi|355568950|gb|EHH25231.1| hypothetical protein EGK_09013 [Macaca mulatta]
gi|355754404|gb|EHH58369.1| hypothetical protein EGM_08200 [Macaca fascicularis]
Length = 856
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|426346562|ref|XP_004040945.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 856
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|395749487|ref|XP_003778952.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Pongo
abelii]
Length = 833
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 630 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 689
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 690 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 749
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 750 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 792
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 793 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 827
>gi|26324818|dbj|BAC26163.1| unnamed protein product [Mus musculus]
Length = 827
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVPFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>gi|426346560|ref|XP_004040944.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 827
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|393788564|ref|ZP_10376691.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
gi|392654244|gb|EIY47892.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 7/180 (3%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
L P ++ L + GA D + WR +TCN++H G+ HIL NM +L+ IG+ LE F
Sbjct: 59 LFEPKTLELLQWGA-DFGPLTLTGSWWRTLTCNFVHIGIVHILMNMYALVYIGVLLEPMF 117
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ Y+++G ++ S + IS GASGA+FGL G L+ L + ++ L
Sbjct: 118 GTRRMFAAYLLTGLCSAVSSLFWHAETISAGASGAIFGLYGIFLAFLCFHHIEKAQRNAL 177
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
++++ + NL G+ +DN AHIGG ISGF+LGFV+++ E+R L Y +
Sbjct: 178 LSSILIFVGYNLIYGLKEGIDNAAHIGGLISGFILGFVYVM----ALNEKRLKLQKYYTM 233
>gi|119609807|gb|EAW89401.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 851
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 648 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 707
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 708 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 767
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 768 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 810
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 811 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 845
>gi|54311128|gb|AAH16034.2| Rhomboid 5 homolog 2 (Drosophila) [Homo sapiens]
gi|158257702|dbj|BAF84824.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|114670631|ref|XP_511699.2| PREDICTED: inactive rhomboid protein 2 isoform 6 [Pan troglodytes]
Length = 856
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|301069362|ref|NP_078875.4| inactive rhomboid protein 2 isoform 1 [Homo sapiens]
gi|193806488|sp|Q6PJF5.2|RHDF2_HUMAN RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid 5 homolog 2; AltName: Full=Rhomboid family
member 2; AltName: Full=Rhomboid veinlet-like protein 5;
AltName: Full=Rhomboid veinlet-like protein 6
Length = 856
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|158257764|dbj|BAF84855.1| unnamed protein product [Homo sapiens]
Length = 827
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGDLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|119609810|gb|EAW89404.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 827
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|93352558|ref|NP_001005498.2| inactive rhomboid protein 2 isoform 2 [Homo sapiens]
Length = 827
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|109118386|ref|XP_001104742.1| PREDICTED: rhomboid family member 2-like isoform 1 [Macaca mulatta]
Length = 827
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|399220330|ref|NP_001100537.2| rhomboid family member 2 [Rattus norvegicus]
gi|399220332|ref|NP_001257763.1| rhomboid family member 2 [Rattus norvegicus]
Length = 825
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 741
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG RY L +VSL LV GL
Sbjct: 742 HIFGFLSGMLLAFAFLPYITFG-TSDRYRKQA---------------LILVSL-LVFAGL 784
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 785 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 819
>gi|397484236|ref|XP_003813283.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Pan paniscus]
Length = 856
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>gi|397484234|ref|XP_003813282.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Pan paniscus]
Length = 827
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|393248033|gb|EJD55540.1| rhomboid-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 325
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 25/212 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R IT +LH G+ HIL NM + ++ ++E+E G LLY +G G L + +
Sbjct: 126 QWFRFITPIFLHAGIIHILLNMFAQFMLAAQIEREMGSGGFVLLYFAAGIFGCLGANFAL 185
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
+ SVGASGA+FG + + +L +W K + L++ + I + +G +P VDNFA
Sbjct: 186 IGSPSVGASGAIFGTIAVLWVDLFAHWQFEQQPKKKLVFLLIDLLIGIGLGYIPGVDNFA 245
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+GGF G L +FL + +RR ++ I W + ++ + + +
Sbjct: 246 HLGGFFMGLLFAIIFL---------------PVISTTRR----HKTIFWFLRIITIPIAV 286
Query: 309 TLGLVMLLRGV---DANDHCSWCHYLSCVPTS 337
+ V+L+R D CS C YLSC PT+
Sbjct: 287 IM-FVILIRNFYTGDPYSACSGCRYLSCFPTA 317
>gi|114670635|ref|XP_001152047.1| PREDICTED: inactive rhomboid protein 2 isoform 3 [Pan troglodytes]
Length = 827
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|45825436|gb|AAS77567.1| rhomboid veinlet-like 5 [Homo sapiens]
Length = 827
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 787 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 821
>gi|402901170|ref|XP_003913529.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Papio
anubis]
Length = 828
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 744
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 745 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 787
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 788 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 822
>gi|353234818|emb|CCA66839.1| related to membrane protein [Piriformospora indica DSM 11827]
Length = 577
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 34/220 (15%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R IT +LH G+ H L NM + V+ ++E+E G I +LY G G++L
Sbjct: 365 EPNQWFRFITPIFLHAGIIHFLLNMFAQWVLSGQVEREMGSIGFFILYFACGVFGNILGG 424
Query: 188 LF-IQSNISVGASGALFGLLGSMLSELITNWTIYTNK------HFLTLVVIIAINLAVGI 240
F + SVGASGA+ G L + +LI +W I H + LV+++ + G
Sbjct: 425 NFALVGQPSVGASGAIVGTLAVLWVDLIAHWGIEYKPVQKLIGHIINLVLVVGM----GY 480
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVS 300
+P VDNF+H+GG + G + G + L +S K ++ I+W +
Sbjct: 481 IPGVDNFSHLGGLLMGLITGIILL-----------------PIISTTK--RHKMIVWALR 521
Query: 301 LVLVIVGLTLGLVMLLRGV---DANDHCSWCHYLSCVPTS 337
+ ++ + + L V+L+R D + CSWC YLSC+PT+
Sbjct: 522 IAMIPLAIVL-FVVLIRNFYTGDPSKACSWCRYLSCIPTA 560
>gi|264681541|ref|NP_766160.2| inactive rhomboid protein 2 [Mus musculus]
gi|264681547|ref|NP_001161152.1| inactive rhomboid protein 2 [Mus musculus]
gi|81873327|sp|Q80WQ6.1|RHDF2_MOUSE RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6; AltName: Full=Rhomboid-related
protein
gi|30354647|gb|AAH52182.1| Rhomboid 5 homolog 2 (Drosophila) [Mus musculus]
gi|37726547|gb|AAO34122.1| rhomboid-related protein [Mus musculus]
gi|148702639|gb|EDL34586.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 827
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>gi|187934985|ref|YP_001884978.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723138|gb|ACD24359.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
Length = 321
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Query: 130 HQG--WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+QG WRLITC +LHGG+ H+L+NM SL ++G ++E+ FG + +Y S SLLS
Sbjct: 180 YQGEIWRLITCAFLHGGIAHLLSNMYSLYILGPQVERIFGLKKYLCIYFTSAITSSLLSV 239
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDN 246
L ++++SVGASGA+FGLLG++L I + L LV II + L G + +DN
Sbjct: 240 LLNENSVSVGASGAIFGLLGAILIFSIKERHRIKKGYILNLVGIIILILMSGFTIRGIDN 299
Query: 247 FAHIGGFISGFLLGFVFLIRP 267
HIGGF+ G ++G + +I+
Sbjct: 300 LGHIGGFLGGLIMGRILMIKK 320
>gi|148702640|gb|EDL34587.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
Length = 888
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 685 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 744
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 745 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 804
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 805 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 847
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 848 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 882
>gi|406862658|gb|EKD15708.1| rhomboid family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 570
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 141/300 (47%), Gaps = 46/300 (15%)
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIG 159
P +NP+ P S T ++++ ++ W R I +LH G+ HI NML L +G
Sbjct: 272 PDSQNPVY-PGSTTDA------LNEIANQPNQWFRFIVPIFLHAGLIHIGFNMLLQLTLG 324
Query: 160 IRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWT 218
+E G IR L+Y SG G +L F I S GASGALFG++ L +L+ W+
Sbjct: 325 KDMEIAIGPIRYFLVYFSSGIFGFVLGGNFAAVGIASTGASGALFGVIALNLLDLLYTWS 384
Query: 219 IYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGW 271
+ K F +++ I+ +G+LP +DNF+HIGGF+ G LG L +R + G
Sbjct: 385 ERRSPWKDFAFIMLDCVISFGLGLLPGLDNFSHIGGFLMGLALGICILHSPNALRKRIGQ 444
Query: 272 VEQRY---------------ALSGYSALSRRKFMTYQCILWI------VSLVLVIVGLTL 310
+ Y +++G+ F + + W+ SLV V+V
Sbjct: 445 DDPPYVVAPIKAGDGAIPTASMTGFLKNPVGFFKGRKPVWWVWWFVRAGSLVFVLV---- 500
Query: 311 GLVMLLRGVDANDH-CSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLNVTCSSNGKSNL 369
++LLR + CSWC YLSC+ + W S+ + + + S+NGK +L
Sbjct: 501 VFILLLRNFYTDRKTCSWCKYLSCINVNDWCEVGNLELTSSRTN----DTSSSTNGKRDL 556
>gi|149054866|gb|EDM06683.1| rhomboid, veinlet-like 6 (Drosophila) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 595
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 392 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 451
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 452 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 511
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG RY L +VSL LV GL
Sbjct: 512 HIFGFLSGMLLAFAFLPYITFG-TSDRYRKQA---------------LILVSL-LVFAGL 554
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 555 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 589
>gi|440913469|gb|ELR62919.1| Rhomboid family member 1 [Bos grunniens mutus]
Length = 861
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 131 QGWRLITCNWLHGG-------VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
Q +RL +LH G V H L ++ + + LE+ G+ R+ ++Y++SG G+
Sbjct: 651 QFYRLWLSLFLHAGQVTPRGLVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 710
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGIL 241
L SA+F+ VG +G+ FG+L + EL +W I + F L+ ++ G+L
Sbjct: 711 LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL 770
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIV 299
P +DNFAHI GFISG L F FL FG KF Y +C + +
Sbjct: 771 PWIDNFAHISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVF 813
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
LV + + L ++ V C WC +L+C+P + C
Sbjct: 814 QLVFLGLLAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 851
>gi|21595108|gb|AAH31398.1| Rhbdf2 protein, partial [Mus musculus]
Length = 607
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 123/265 (46%), Gaps = 23/265 (8%)
Query: 84 KNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLH 142
K S R F F E+ L L K+ G L Q +R+ +LH
Sbjct: 356 KGSCEITTREYCEFMHGYFHEDATLCSQVHCLDKVCGLLPFLNPEVPDQFYRIWLSLFLH 415
Query: 143 GGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGAL 202
G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+ VG +G+
Sbjct: 416 AGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFLPYRAEVGPAGSQ 475
Query: 203 FGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLG 260
FGLL + EL +W + K F L I+ G+LP +DN AHI GF+SG LL
Sbjct: 476 FGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIAHIFGFLSGMLLA 535
Query: 261 FVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVD 320
F FL Y G S R++ L +VSL LV GL LV+ L
Sbjct: 536 FAFL----------PYITFGTSDKYRKR------ALILVSL-LVFAGLFASLVLWLYIYP 578
Query: 321 ANDHCSWCHYLSCVP-TSRWSCRTE 344
N W YL+C P TSR+ + E
Sbjct: 579 IN--WPWIEYLTCFPFTSRFCEKYE 601
>gi|167517132|ref|XP_001742907.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779531|gb|EDQ93145.1| predicted protein [Monosiga brevicollis MX1]
Length = 323
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ QGWR++T ++H G H+L + L +G+ LE++ G++R+ L+Y+ISG GG+L+SA
Sbjct: 117 NPDQGWRILTALFMHAGAIHLLVMLYVQLSVGVPLERKAGWLRIALIYLISGCGGNLVSA 176
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVD 245
LF+ ++ VGASGA++GL+ + L +L+ W + + T ++ A+ L +G P +D
Sbjct: 177 LFVPNSAQVGASGAVYGLVATALVDLMHCWRLLKSPWVQLGTYLIQTAVLLLLGTTPWLD 236
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFG-WVEQRYAL 278
NFAH+GGF+ G L G VFL FG W + R L
Sbjct: 237 NFAHVGGFLFGLLGGIVFLPYVTFGAWDKFRKRL 270
>gi|378726481|gb|EHY52940.1| hypothetical protein HMPREF1120_01142 [Exophiala dermatitidis
NIH/UT8656]
Length = 524
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 155/372 (41%), Gaps = 90/372 (24%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPS 111
K W + IP +VV +++ IT+++ KNS+ + + F NP++GPS
Sbjct: 118 KKKAGWFSGKIP-WVVYTLSLVQITVFIVEIIKNSIITGSPIMIHPQF-----NPMIGPS 171
Query: 112 SVTLQKMGAL------------DVSKVVD------------------------------- 128
+ MGA D S+ ++
Sbjct: 172 TYVQINMGARFVPCMRVTPGVQDSSEPINWPCPNTTTSDANAASNHCDLKALCGFSGFSN 231
Query: 129 --KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
+Q +R I +LH G+ HI N++ L + +E+ G IR L+Y SG G +L
Sbjct: 232 EHPNQWFRFIVPMFLHAGLVHIAFNLMLQLTMAREMEKAIGSIRFALVYFSSGIFGFVLG 291
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPH 243
F S I S GASG LFG+L L +LI W + + + ++V + I+ +G+LP
Sbjct: 292 GNFAASAIASTGASGCLFGVLALTLLDLIYGWNERRSPVRELMWILVDVLISFVLGLLPG 351
Query: 244 VDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQ------------------------ 274
+DNF+HIGGF+ G +G L +R + G V
Sbjct: 352 LDNFSHIGGFLMGLAMGICILHSPNILRKRNGEVSAAPYRNVGSEPDISNPKNPMLAAST 411
Query: 275 -RYALSGYSALSRRK--FMTYQCILWIVSLVL---VIVGLTLGLVMLLRGV-DANDHCSW 327
A + SA ++ F + LW + ++G+ + V+LL +D CSW
Sbjct: 412 PTTAPADVSAFTKHPLGFFKARKPLWWAWWLFRAGALIGVLVAFVVLLNNFYKYHDTCSW 471
Query: 328 CHYLSCVPTSRW 339
C YLSC+P W
Sbjct: 472 CKYLSCLPIKNW 483
>gi|351696488|gb|EHA99406.1| Rhomboid family member 2 [Heterocephalus glaber]
Length = 855
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L +++ + I LE+ G+ R+ +++++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 712 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFVCGLLPWIDNIA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 772 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 814
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
LV+ L N W YL+C P + C
Sbjct: 815 FASLVLWLYIYPIN--WPWIEYLTCFPFTSHFC 845
>gi|167526511|ref|XP_001747589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774035|gb|EDQ87669.1| predicted protein [Monosiga brevicollis MX1]
Length = 883
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR IT + H V H + +++ G ++E G +R L+Y ISG GG+ ++A+F
Sbjct: 684 QWWRFITPLFFHASVAHAILVLIAQYYYGRKMETHIGAMRSLLIYFISGIGGTCIAAVFS 743
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV---VIIAINLAVGILPHVDNF 247
++SVG + +++G+L L +L +W + ++ L+L +IA+ L VG +VDN+
Sbjct: 744 PLDVSVGTNPSVYGILAVHLVDLFQSWQL-VDRPGLSLAGLGGVIAVLLLVGTTSYVDNW 802
Query: 248 AHIGGFISGFLLGFVFLIRPQFG-WVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
+HIGGF G + G +F+ FG W L+R++ + + C L+LV+
Sbjct: 803 SHIGGFAFGLVSGIIFIPYITFGKW-----------DLARKRLLLFIC----APLLLVMF 847
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ + + + CSWC YL+CVP + C
Sbjct: 848 ---VAAFVTFYQIQNTEFCSWCDYLNCVPYADGMC 879
>gi|384485233|gb|EIE77413.1| hypothetical protein RO3G_02117 [Rhizopus delemar RA 99-880]
Length = 358
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
HQ +RLI ++H GV H L NML+ L +G+ LE+ G R +LY+ SG G +LSA+
Sbjct: 216 HQSFRLILPIFMHAGVIHFLMNMLTHLRLGVDLERALGTPRYVVLYMASGIYGFVLSAML 275
Query: 190 IQS-NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDN 246
Q+ + S G SGALFGL+G M +++ NW + + + ++L+V I+L +G+LP +DN
Sbjct: 276 SQNLSASTGCSGALFGLIGYMFIDVLVNWKVLPHPVRDLMSLLVSTIISLVLGLLPGLDN 335
Query: 247 FAHIG 251
FAHIG
Sbjct: 336 FAHIG 340
>gi|325297592|ref|YP_004257509.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
gi|324317145|gb|ADY35036.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
Length = 963
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
L+ P+ ++L K GA D + WR +TCN++H G+ H+L NM +LL IGI LEQ
Sbjct: 561 LIEPTGISLMKWGA-DFGPLTLTGDWWRTVTCNFIHIGIIHLLMNMYALLYIGIFLEQII 619
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH-- 224
G ++ Y+++G +L S IS GASG++FGL G LS LI N I ++
Sbjct: 620 GSRKLMTAYLLTGLFSALASLTAHPETISAGASGSIFGLYGIFLSYLIFNHKIEKHQRKS 679
Query: 225 -FLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQF 269
++ + NL +G +DN AHIGG +SG +LG +L+ ++
Sbjct: 680 LLFSIGFFVIYNLLLGTKEEGIDNAAHIGGLVSGVILGITYLLADKY 726
>gi|328857613|gb|EGG06729.1| hypothetical protein MELLADRAFT_43423 [Melampsora larici-populina
98AG31]
Length = 517
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 107/213 (50%), Gaps = 28/213 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF- 189
Q +R I +LH GV H N+L + +E++ G IR LLYI SG G +L F
Sbjct: 270 QTFRFILPMFLHAGVIHYAINILVQMTSSALIERQMGSIRFLLLYIPSGIFGFILGGNFS 329
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIY---TNKHFLTLVVIIAINLAVGILPHVDN 246
+ SVGASGA+F ++L +L+ +W+I K F L IIA LA+G++P +DN
Sbjct: 330 LVGQPSVGASGAIFSTHAAVLVDLVAHWSIEDRPARKLFFLLFEIIA-GLALGLIPGIDN 388
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
F+H+GGF G LL + F + Q + L R F T + + ++
Sbjct: 389 FSHLGGFAMGLLLSLIL-----FPVLHQ-------TKLHRISFYTMRLV--------CLL 428
Query: 307 GLTLGLVMLLRGVDAND---HCSWCHYLSCVPT 336
G L +L R +D CSWC YLSC PT
Sbjct: 429 GSILMFSLLYRNFFTDDPAASCSWCRYLSCWPT 461
>gi|90653004|gb|ABD95905.1| RHBDG1 [Homo sapiens]
Length = 862
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 141 LHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASG 200
L G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G
Sbjct: 669 LWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAG 728
Query: 201 ALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
+ FG+L + EL +W I + F L+ ++ G+LP +DNFAHI GFISG
Sbjct: 729 SQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLF 788
Query: 259 LGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIVGLTLGLVMLL 316
L F FL FG KF Y +C + I +V + + L ++ +
Sbjct: 789 LSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGLLAGLVVLFYV 831
Query: 317 RGVDANDHCSWCHYLSCVPTSRWSC 341
V C WC +L+C+P + C
Sbjct: 832 YPV----RCEWCEFLTCIPFTDKFC 852
>gi|14336678|gb|AAK61212.1|AE006462_4 unknown [Homo sapiens]
gi|119606279|gb|EAW85873.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 862
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 141 LHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASG 200
L G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G
Sbjct: 669 LWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAG 728
Query: 201 ALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
+ FG+L + EL +W I + F L+ ++ G+LP +DNFAHI GFISG
Sbjct: 729 SQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLF 788
Query: 259 LGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIVGLTLGLVMLL 316
L F FL FG KF Y +C + I +V + + L ++ +
Sbjct: 789 LSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGLLAGLVVLFYV 831
Query: 317 RGVDANDHCSWCHYLSCVPTSRWSC 341
V C WC +L+C+P + C
Sbjct: 832 YPV----RCEWCEFLTCIPFTDKFC 852
>gi|358055893|dbj|GAA98238.1| hypothetical protein E5Q_04921 [Mixia osmundae IAM 14324]
Length = 1646
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 92/331 (27%), Positives = 139/331 (41%), Gaps = 88/331 (26%)
Query: 58 VTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
V W++ +A IA F + M VN FSF+P NP+LGPS+ L
Sbjct: 1309 VVWILS---LAMIATFAVEM-VNQSKATG--------SPFSFKP-TINPMLGPSTWVLIN 1355
Query: 118 MGAL------DVSKVVDK-----------------------------------HQGWRLI 136
GA V + D +QG+R +
Sbjct: 1356 NGARFDPCMKSVPTITDNPGLQFPCLNNTANPATSLCSLEQICGFGGFDGKVPNQGFRFV 1415
Query: 137 TCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-S 195
++H G+ HI N+L + +E++ G +R LLY +G G +L F + S
Sbjct: 1416 LPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLRFFLLYFPAGIFGFILGGNFALVGLPS 1475
Query: 196 VGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGF 253
VGASGA++G S+ +L+ +W + + K L++ I + +G +P VDNF+HIGGF
Sbjct: 1476 VGASGAIYGTHASVFVDLVAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDNFSHIGGF 1535
Query: 254 ISGFLLGFVFLIRPQFGWVEQR----YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLT 309
G L L+ P ++R Y L SA G+
Sbjct: 1536 AMG--LTCSILLYPVIHHTKRRRVILYTLRAISA----------------------PGIV 1571
Query: 310 LGLVMLLRG---VDANDHCSWCHYLSCVPTS 337
L V+L+R VD N+ C +C Y+SC PT+
Sbjct: 1572 LMFVLLIRNFYTVDPNNACEFCKYISCWPTT 1602
>gi|358055892|dbj|GAA98237.1| hypothetical protein E5Q_04920 [Mixia osmundae IAM 14324]
Length = 1648
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 92/331 (27%), Positives = 139/331 (41%), Gaps = 88/331 (26%)
Query: 58 VTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQK 117
V W++ +A IA F + M VN FSF+P NP+LGPS+ L
Sbjct: 1311 VVWILS---LAMIATFAVEM-VNQSKATG--------SPFSFKP-TINPMLGPSTWVLIN 1357
Query: 118 MGAL------DVSKVVDK-----------------------------------HQGWRLI 136
GA V + D +QG+R +
Sbjct: 1358 NGARFDPCMKSVPTITDNPGLQFPCLNNTANPATSLCSLEQICGFGGFDGKVPNQGFRFV 1417
Query: 137 TCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-S 195
++H G+ HI N+L + +E++ G +R LLY +G G +L F + S
Sbjct: 1418 LPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLRFFLLYFPAGIFGFILGGNFALVGLPS 1477
Query: 196 VGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGF 253
VGASGA++G S+ +L+ +W + + K L++ I + +G +P VDNF+HIGGF
Sbjct: 1478 VGASGAIYGTHASVFVDLVAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDNFSHIGGF 1537
Query: 254 ISGFLLGFVFLIRPQFGWVEQR----YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLT 309
G L L+ P ++R Y L SA G+
Sbjct: 1538 AMG--LTCSILLYPVIHHTKRRRVILYTLRAISA----------------------PGIV 1573
Query: 310 LGLVMLLRG---VDANDHCSWCHYLSCVPTS 337
L V+L+R VD N+ C +C Y+SC PT+
Sbjct: 1574 LMFVLLIRNFYTVDPNNACEFCKYISCWPTT 1604
>gi|67900700|ref|XP_680606.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
gi|40742518|gb|EAA61708.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
Length = 1070
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 42/257 (16%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD D Q +R I +LH G HI N+L + +G +E+ G+ R GL+Y+ S
Sbjct: 240 GSLDDKPAPD--QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSS 297
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W N + +V+ IA++
Sbjct: 298 GIWGFVLGGNYAGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVS 357
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA------------- 277
+G+LP +DNF+H+GGF G LG + +R + G Y
Sbjct: 358 FVLGLLPGLDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADP 417
Query: 278 ----------LSGYSALSRRKFMTYQCILW-------IVSLVLVIVGLTLGLVMLLRGVD 320
+ G + + F + LW + +LV V++G L +V +
Sbjct: 418 DQNKTSTGSNIGGLGKFNPKGFFAGRKPLWWAWWLVRLGALVAVLIGFILLIVNFYKYPS 477
Query: 321 ANDHCSWCHYLSCVPTS 337
+N CSWC+ SC+P +
Sbjct: 478 SN--CSWCYRFSCLPVN 492
>gi|10438686|dbj|BAB15310.1| unnamed protein product [Homo sapiens]
Length = 619
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 416 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 475
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 476 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 535
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 536 HIFGFLSGLLLAFAFL----------PYITFGTSDKYRKR------ALILVSL-LAFAGL 578
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 579 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 613
>gi|354489445|ref|XP_003506873.1| PREDICTED: inactive rhomboid protein 2 [Cricetulus griseus]
Length = 825
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 741
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ + I++ +LV GL
Sbjct: 742 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKRAL-------ILASLLVFAGL 784
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRW 339
LV+ L N W +L+C P TSR+
Sbjct: 785 FASLVLWLYIYPIN--WPWIEHLTCFPFTSRF 814
>gi|395825880|ref|XP_003786148.1| PREDICTED: inactive rhomboid protein 2 [Otolemur garnettii]
Length = 829
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 626 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 685
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 686 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 745
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ +L +VSL L GL
Sbjct: 746 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------VLILVSL-LAFAGL 788
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 789 FASLVLWLYIYPIN--WPWVEFLTCFPFTSRFCEKYE 823
>gi|54311162|gb|AAH35829.1| RHBDF2 protein [Homo sapiens]
Length = 649
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 446 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 505
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 506 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 565
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 566 HIFGFLSGLLLAFAFL----------PYITFGTSDKYRKR------ALILVSL-LAFAGL 608
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 609 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 643
>gi|357453415|ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
gi|355486032|gb|AES67235.1| Rhomboid family member [Medicago truncatula]
Length = 221
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 68/100 (68%)
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
P NPL+G S +TL KMGA+ K H +RL TC WLH GV +L NML++L I
Sbjct: 122 PITHNPLMGSSPLTLVKMGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYI 181
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASG 200
LE++FG+IR+ +L+ +SG G +L SAL I +++SVGASG
Sbjct: 182 YLEKKFGYIRIAILHTMSGMGSNLFSALCIPTSVSVGASG 221
>gi|171692185|ref|XP_001911017.1| hypothetical protein [Podospora anserina S mat+]
gi|170946041|emb|CAP72842.1| unnamed protein product [Podospora anserina S mat+]
Length = 523
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 158/359 (44%), Gaps = 78/359 (21%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G + KK + +++ F + +A+F+ + KN S + + + F NP++
Sbjct: 137 GMLGSGKKKIPFVVYFFTIVQVAVFIGELV-----KNGTSTGSPIMIKPQF-----NPMI 186
Query: 109 GPSSVTLQKMGALDVS-----KVVDKHQG------------------------------- 132
GPS L MGA V K + + +G
Sbjct: 187 GPSPYILINMGARFVPCMHNVKAIQEAEGPVSWPCPWSTTNENTCTLSELCGFGGVQQPG 246
Query: 133 --------WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
+R I +LH G+ HI NML L +G +E+ G IR ++Y+ +G G +
Sbjct: 247 QPPEPNQWFRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKHIGSIRFFIVYMSAGIFGFV 306
Query: 185 LSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGIL 241
+ F + I S GASG+LFG++ +L+ +W N K + L + I I+ +G+L
Sbjct: 307 MGGNFAATGIASTGASGSLFGIIALTFLDLLYSWKDRVNPTKDLMYLFIDIIISFVLGLL 366
Query: 242 PHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRK-------- 288
P +DNF+HIGGF+ G LG L +R + G E YA S S+ ++
Sbjct: 367 PGLDNFSHIGGFLMGLALGICILHSPNSLRRRIGESEVPYANSQVSSGFLKEGTVPPFFK 426
Query: 289 ----FMTYQCIL----WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
F + L W++ + +I+ L + +++L + C WC YLSC+P + W
Sbjct: 427 NPVGFFKGRKPLWWGWWLIRVGALILVLVVFVLLLNNFYIHHKVCGWCKYLSCLPVNNW 485
>gi|167763036|ref|ZP_02435163.1| hypothetical protein BACSTE_01401 [Bacteroides stercoris ATCC
43183]
gi|167699376|gb|EDS15955.1| peptidase, S54 family [Bacteroides stercoris ATCC 43183]
Length = 771
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
LL P+ +++ K GA D + WR ITCN++H GV H+L NM +LL IGI LEQ
Sbjct: 374 LLAPTGISIIKWGA-DFGPLTLTGDWWRTITCNFIHIGVIHVLMNMYALLYIGIFLEQLI 432
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ Y ++G +L S IS GASG++FGL G LS L+ + I +
Sbjct: 433 GGRRLISAYFLTGLFSALASLAMHPETISAGASGSIFGLYGIFLSYLVFHHRIEKGQRKS 492
Query: 227 TLVVI---IAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQFG 270
L I + NL G +DN AHIGG +SG +LG ++L+ +F
Sbjct: 493 LLYSIGFFVFYNLMSGARAEGIDNAAHIGGLVSGIILGIIYLLTDRFA 540
>gi|348521001|ref|XP_003448015.1| PREDICTED: inactive rhomboid protein 2-like [Oreochromis niloticus]
Length = 830
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H + +++ + I LE+ G++R+ ++Y++SG G+L SALF+
Sbjct: 623 QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWLRISIIYMLSGITGNLASALFL 682
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL W + F L I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQGWQMLEKPWNAFSKLSCIVLFLFLCGLLPWIDNIA 742
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG F Y+ + I +L VGL
Sbjct: 743 HIFGFLSGLLLSFAFLPYVTFG-----------------TFDKYRKRILIAVSLLAYVGL 785
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
L++ N H W +L+C+P + C
Sbjct: 786 FASLIVWFYIYPINFH--WLEHLTCLPFTNKFCE 817
>gi|295425277|ref|ZP_06817980.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
gi|295065053|gb|EFG55958.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
Length = 226
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 105/177 (59%), Gaps = 16/177 (9%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
C+A FL +F EN + TL K+GA++ VV HQ WRLIT +LH G++H+
Sbjct: 20 CIAMFLVE-TFMGGSEN------TATLVKLGAMNNYAVVAGHQWWRLITAQFLHIGIWHL 72
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLG 207
++N++ + +G+ +E G R L+Y++SG GG+LLS F +I GAS ALFGL G
Sbjct: 73 VSNIVMIYYMGLIIEPMLGHWRFLLIYLLSGVGGNLLSLAFGSDKSIGAGASTALFGLFG 132
Query: 208 SMLSELITNW----TIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLL 259
++++ I + Y + L L V +NL + I LP++D + HIGG ISGFLL
Sbjct: 133 AVIALGIRHRANPVVAYVGRQALVLAV---LNLIIDIFLPNIDIYGHIGGLISGFLL 186
>gi|441644013|ref|XP_003279183.2| PREDICTED: inactive rhomboid protein 2 [Nomascus leucogenys]
Length = 736
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 109/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L S +F+
Sbjct: 533 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIFL 592
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 593 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 652
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 653 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 695
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 696 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 730
>gi|336417117|ref|ZP_08597446.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
gi|335936742|gb|EGM98660.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
Length = 592
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|293373190|ref|ZP_06619552.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
gi|292631838|gb|EFF50454.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
Length = 584
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 340
>gi|296816012|ref|XP_002848343.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
gi|238841368|gb|EEQ31030.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
Length = 488
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 21/238 (8%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y SG G
Sbjct: 240 IDDKPEPNQWFRFILPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFG 299
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+L F I S GASG LFG+ + +L W + +++ +AI+ +G
Sbjct: 300 FVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLG 359
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRK------ 288
+LP +DNF+HIGGF++G +LG L +R + G ++ G + +
Sbjct: 360 LLPGLDNFSHIGGFLTGLVLGICVLRSPDTLRERIGVKIPYVSMGGNLGVDENQKKFYKQ 419
Query: 289 ---FMTYQCILWIVSLVL---VIVGLTLGLVMLLRG-VDANDHCSWCHYLSCVPTSRW 339
F + LW +L ++G+ ++LL CSWC YLSC+P S W
Sbjct: 420 PVNFFQGRKPLWWAWWLLRAGALIGIISSFIVLLNNFYKYRTTCSWCKYLSCLPVSNW 477
>gi|160886529|ref|ZP_02067532.1| hypothetical protein BACOVA_04540 [Bacteroides ovatus ATCC 8483]
gi|423289697|ref|ZP_17268547.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
gi|156108414|gb|EDO10159.1| peptidase, S54 family [Bacteroides ovatus ATCC 8483]
gi|392667408|gb|EIY60918.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
Length = 592
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 304 LASILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|423298194|ref|ZP_17276253.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
gi|392663610|gb|EIY57158.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
Length = 592
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|383113335|ref|ZP_09934107.1| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
gi|382948721|gb|EFS32339.2| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
Length = 592
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|299149420|ref|ZP_07042477.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
gi|298512607|gb|EFI36499.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
Length = 592
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|237723366|ref|ZP_04553847.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447888|gb|EEO53679.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 584
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE+
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G + S IS GASG++FGL G L+ L+ + + L
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
++++ + NL G+ +DN AHIGG +SGF+LG ++++ +F
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 340
>gi|320592945|gb|EFX05354.1| rhomboid family membrane protein [Grosmannia clavigera kw1407]
Length = 734
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 122/246 (49%), Gaps = 28/246 (11%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G D S D Q +R I ++H G+ HI NM+ L +G +E+ G IR ++YI S
Sbjct: 465 GNADQSPQPD--QWFRFIVPMFMHAGLIHIGFNMMLQLTMGRDMERAIGSIRFFIVYICS 522
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G +L + + I S GASGALFG++ L +L+ +W N K + + + + I+
Sbjct: 523 GIFGFVLGGNYAATGISSTGASGALFGVIALTLLDLLYSWRDRRNPVKDLMFIFLDVLIS 582
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA----------LSG 280
+G+LP +DNF+HIGGF G LG L +R + G YA SG
Sbjct: 583 FVLGLLPGLDNFSHIGGFFMGLALGVSVLHSPNALRRRVGEENATYAAVNATYTSPTASG 642
Query: 281 YSALSRRKFMTYQC--ILWIVSLVLVIVGLTLGLVMLLRGVDANDH-----CSWCHYLSC 333
+A R T++ LW + L+ VG + +++L + N + C WC YLSC
Sbjct: 643 VAAFVRNPLATFRNRRPLWW-AWWLLRVGFVVLVIVLFVLLLKNFYVYRKTCGWCKYLSC 701
Query: 334 VPTSRW 339
+P W
Sbjct: 702 LPVHNW 707
>gi|307171848|gb|EFN63503.1| Rhomboid family member 1 [Camponotus floridanus]
Length = 925
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H++ +L + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 718 QFYRLFTTIFLHAGIVHLVITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 777
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L++I+ L +GILP VDN+A
Sbjct: 778 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILVGLLMLGILPWVDNYA 837
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + + FG ++ RRK + ++W+ +++IVGL
Sbjct: 838 HLFGFIFGFLAAYALMPFISFGHYDR-----------RRKIL----LIWVC--LILIVGL 880
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
L+ L V + C C +CVP +R C ++
Sbjct: 881 FALLLALFYNVPVYE-CEVCKLFNCVPFTRDFCASQ 915
>gi|443731516|gb|ELU16621.1| hypothetical protein CAPTEDRAFT_101212 [Capitella teleta]
Length = 466
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 20/215 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL ++H G+F ++ ++L + LE+ G++R+ ++Y+ SG GSL SA+F+
Sbjct: 258 QFYRLWLSLFVHAGLFQLIISVLFQFFMMRDLEKLAGWLRIAIIYLGSGVAGSLSSAIFL 317
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--TLVVIIAINLAVGILPHVDNFA 248
++ G +GA FGLL ++ E++ NW I + + L+VII + VG+LP +DN+A
Sbjct: 318 PYHVEAGPAGAQFGLLACLVVEILHNWYILASPWWAMGKLIVIIIVLFIVGLLPFIDNYA 377
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ G + GFLL F L F +++R + G + L L++
Sbjct: 378 HLIGLVFGFLLSFSLLPYVNFNTLDRRSKIIG------------------IVLSLIVSAG 419
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
L+++L V +C +CHY +C+P + C+T
Sbjct: 420 LFALLIVLFYVTPVYNCPYCHYFNCIPFTDKFCQT 454
>gi|402074200|gb|EJT69729.1| rhomboid family membrane protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 587
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 33/245 (13%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ V +Q +R IT ++H G+ HI N+L L IG +E G +R L+Y+ +G G
Sbjct: 315 ASVPAPNQWFRFITPIFMHAGLIHIGFNLLLQLTIGRDMEMSIGTLRFFLVYMSAGIFGF 374
Query: 184 LLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGI 240
++ F + I S GASG+LFG++ L +L+ +W N K L + + +AI+ +G+
Sbjct: 375 VMGGNFAATGIASTGASGSLFGIIALTLLDLLYSWKDRKNPTKDLLFIFLDVAISFVLGL 434
Query: 241 LPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA--LSGYSALSRRK----- 288
LP +DNF+HIGGF+ G LG L +R + G + Y G + ++ +
Sbjct: 435 LPGLDNFSHIGGFLMGLALGVCLLHSPNSLRRRIGTDDPPYTPVQDGRARVTGSQTAPPF 494
Query: 289 ------FMTYQCILWIV-------SLVLVIVGLTLGLVMLLRGVDAND-HCSWCHYLSCV 334
F + LW + +L+LV V V+LL HC WC YLSC+
Sbjct: 495 YKNPVGFFKGRKPLWWLWWLIRAGALLLVFV----AFVLLLNNFYVTRVHCEWCKYLSCL 550
Query: 335 PTSRW 339
+ W
Sbjct: 551 NINGW 555
>gi|405950095|gb|EKC18101.1| Rhomboid family member 1 [Crassostrea gigas]
Length = 781
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 33/253 (13%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
Q G +D + + Q +RL T +LHGG+FH++ + ++ +E+ G IR+ ++Y
Sbjct: 555 QICGMMDFADENNPDQFYRLWTSLFLHGGLFHLVITIGFQFLVMRDIEKLTGCIRLAIIY 614
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV--IIA 233
+ SG G+L S++F+ ++ VG +G FG+L +L E++ + + L + IA
Sbjct: 615 LGSGVAGNLASSIFLPYHVEVGPAGCQFGILACLLVEVLQSIQMLKRPCLAILKIGGFIA 674
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
+G+LP +DN+AH+ GF+ GFLL F L FG ++ RRK
Sbjct: 675 FLFILGLLPWIDNWAHVCGFLFGFLLAFSLLPYVSFGEFDR-----------RRK----- 718
Query: 294 CILWIVSLVLVIVG---LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCST 350
I+ ++L + G L + LV+L + D C C Y +C+P + FC
Sbjct: 719 ----IIGIILSLGGAIFLFIILVVLFYVLPLYD-CPGCQYFNCIPLT-------DDFCKN 766
Query: 351 TQDGNQLNVTCSS 363
+ NQ T SS
Sbjct: 767 MEVNNQRESTYSS 779
>gi|431906772|gb|ELK10893.1| Rhomboid family member 1 [Pteropus alecto]
Length = 867
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 142 HGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGA 201
G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G+
Sbjct: 675 RAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGS 734
Query: 202 LFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
FG+L + EL +W I + F L+ ++ G+LP +DNFAHI GF+SG L
Sbjct: 735 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFVSGLFL 794
Query: 260 GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV 319
F FL Y + R +C + + + + + L ++ V
Sbjct: 795 SFAFL---------------PYISFGRFDLYRKRCQIIVFQAIFLGLLAGLVVLFYFYPV 839
Query: 320 DANDHCSWCHYLSCVPTSRWSC 341
C WC +L+C+P + C
Sbjct: 840 ----RCEWCEFLTCIPFTDKFC 857
>gi|381210355|ref|ZP_09917426.1| hypothetical protein LGrbi_10556 [Lentibacillus sp. Grbi]
Length = 520
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S+ TL + GA +++ + WR++ +LH G+ H+L NML++ +G +E+ +G +R
Sbjct: 208 STETLIEFGAKYNPAIIEDGEWWRIVASMFLHIGILHLLMNMLAVYYLGTVVERIYGSLR 267
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
++Y ++G GG L S F +N+S GASGALFGL G++L + I+ + L+
Sbjct: 268 FLIIYFLAGIGGGLASFAFT-TNVSAGASGALFGLFGALLFFGCIHRRIFFQTMGMNLLF 326
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
II IN+ G+ +P VDN AH+GG I+GF+
Sbjct: 327 IIGINIVFGLSVPQVDNGAHMGGLITGFI 355
>gi|358374890|dbj|GAA91478.1| rhomboid family membrane protein [Aspergillus kawachii IFO 4308]
Length = 516
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 55/272 (20%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I ++H G HI N++ L +G+ +E+ G+ R L+Y+ S
Sbjct: 234 GSLDDTPA--PNQWFRFIIPMFIHTGFIHIGFNLIVQLTMGVDMERMIGWWRYFLVYVAS 291
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W + + +++ IA++
Sbjct: 292 GIWGFVLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRASPWVELIIMILGIAVS 351
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSGYSALS---- 285
+G+LP +DNFAHIGGFI G LG L +R + G Y A+SG +
Sbjct: 352 FVLGLLPGLDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPDD 411
Query: 286 ----------------RR---------------KFMTYQCILWIV-------SLVLVIVG 307
RR F + LW +LV V+VG
Sbjct: 412 NQKVNTGPSLVDFLKGRRTRTGAGASNNKWNPVNFFRGRKPLWWAWWLVRAGALVAVLVG 471
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
L +V + +N CSWC+ LSC+P + W
Sbjct: 472 FILLIVDFYKYPKSN--CSWCYRLSCLPVNGW 501
>gi|15894241|ref|NP_347590.1| hypothetical protein CA_C0954 [Clostridium acetobutylicum ATCC 824]
gi|337736171|ref|YP_004635618.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
gi|384457680|ref|YP_005670100.1| hypothetical protein CEA_G0966 [Clostridium acetobutylicum EA 2018]
gi|15023857|gb|AAK78930.1|AE007610_10 Uncharacterized membrane protein [Clostridium acetobutylicum ATCC
824]
gi|325508369|gb|ADZ20005.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336291944|gb|AEI33078.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
Length = 328
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NP+ S+ L MGA + S ++D Q +RLITC +LH G+ HI ANM SL +G LE
Sbjct: 164 NPV-AISNQVLNFMGAKN-SVLIDNGQYYRLITCMFLHAGITHIGANMYSLYSMGYMLEN 221
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH 224
+G +R +Y ISG S S +F + ++SVGASGA+FGLLG+ +
Sbjct: 222 IYGKLRYTAIYFISGITASFFSYIFSRESLSVGASGAIFGLLGAAIVFGFKLRKRIGKAF 281
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISG 256
F +V + A+N+ + +P++D FAH GGF+ G
Sbjct: 282 FANMVGVFALNIFISFTIPNIDIFAHFGGFLGG 314
>gi|432098908|gb|ELK28398.1| Inactive rhomboid protein 1 [Myotis davidii]
Length = 492
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 144 GVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALF 203
G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G+ F
Sbjct: 302 GILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFLPYRAEVGPAGSQF 361
Query: 204 GLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
G+L + EL +W I + F L+ ++ G+LP +DNFAHI GFISG L F
Sbjct: 362 GILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSF 421
Query: 262 VFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDA 321
FL Y + R +C + + V + + L ++ V
Sbjct: 422 AFL---------------PYISFGRFDLYRKRCQIIVFQAVFLGLLAGLVVLFYFYPV-- 464
Query: 322 NDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLN 358
C WC +L+C+P + FC + QL+
Sbjct: 465 --RCEWCEFLTCIPFTD-------KFCEKYELDAQLH 492
>gi|340522831|gb|EGR53064.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 80/361 (22%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G + KK + WL+ F VA +A+F+ + N S + + NP++
Sbjct: 156 GMLGAHKKRIPWLVYIFSVAQVAVFIGEIVRNGLLTGSPIMIKP----------QFNPMI 205
Query: 109 GPSSVTLQKMGAL----------------------------------------------- 121
GPS+ L MGA
Sbjct: 206 GPSTQVLINMGARYVPCMHNIKEIQGSTIPVLFLCPNATKNTQFCPLSELCGFGGDVPNP 265
Query: 122 ----DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
D ++ +Q +R I ++H G+ HI N+L L IG +E G IR L+Y+
Sbjct: 266 KFDGDANQTPIPNQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMS 325
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
+G G ++ + I S GASG+LFG++ L +L+ +W + K L +++ + I
Sbjct: 326 AGIFGFVMGGNYAAPGIASTGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVI 385
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKF 289
+ +G+LP +DNF+HIGGF+ G +LG L +R + G A+ G + F
Sbjct: 386 SFVLGLLPGLDNFSHIGGFLMGLVLGICVLHSPNSLRRRIGQDPLYSAVPGDAEPGTVPF 445
Query: 290 MTYQCIL-----------WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
W+V ++V + + +V++ + CSWC YLSC+P +
Sbjct: 446 YKSPVGFFKGRKPLWWAWWLVRAAALVVIIVVFVVLINNFYKVGNTCSWCKYLSCLPVNG 505
Query: 339 W 339
W
Sbjct: 506 W 506
>gi|358389732|gb|EHK27324.1| hypothetical protein TRIVIDRAFT_34861 [Trichoderma virens Gv29-8]
Length = 510
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 153/361 (42%), Gaps = 80/361 (22%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G + +KK + WL+ F VA +A+F+ + N S + + NP++
Sbjct: 151 GMLGANKKRIPWLVYIFSVAQVAVFIAEIVRNGLLTGSPIMIKP----------QFNPMI 200
Query: 109 GPSSVTLQKMGAL------------------------------------------DVSKV 126
GPS+ L MGA DV
Sbjct: 201 GPSTQVLINMGARYVPCMHNIKEIQGSTIPVLFLCPNATKNTQFCPLSELCGFGGDVPNP 260
Query: 127 V---DKHQG------WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
+ ++HQ +R I ++H G+ HI N+L L IG +E G IR L+Y+
Sbjct: 261 LFDGNEHQSPAPNQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEMAIGSIRFFLVYMS 320
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
+G G ++ + I S GASG+LFG++ L +L+ +W + K L +++ + I
Sbjct: 321 AGIFGFVMGGNYAAPGIASTGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVI 380
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKF 289
+ +G+LP +DNF+HIGGF+ G +LG L +R + G A+ G F
Sbjct: 381 SFVLGLLPGLDNFSHIGGFLMGLVLGICVLHSPNSLRRRIGPDPFYSAVPGAPEPGTVPF 440
Query: 290 MTYQCIL-----------WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
W+V ++V + + +V+L + CSWC YLSC+P +
Sbjct: 441 YKSPVGFFKGRKPLWWAWWLVRAAALVVIIVVFVVLLNNFYKVGNTCSWCKYLSCLPVNG 500
Query: 339 W 339
W
Sbjct: 501 W 501
>gi|340380008|ref|XP_003388516.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 524
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 21/176 (11%)
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFL 226
+RV L+Y+ISG GG L+S +FI +SVGASG+LFGLLG L EL+ W N
Sbjct: 351 LRVILIYVISGVGGLLISGIFIPETVSVGASGSLFGLLGVQLVELLQGWKWVKNPCVQLT 410
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSR 286
L++ I L +G LP++DN+A+IGGF+ G + FVF+ G ++
Sbjct: 411 KLLIFDIILLVLGTLPYIDNYANIGGFLFGTVSAFVFVPYISVGKWDK-----------V 459
Query: 287 RKFMTYQCILWIVSLVL-VIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+KF IV+L V+V + L + + + CSWC Y++C+P + C
Sbjct: 460 KKFT-------IVTLFFPVLVFMFLVAIFFFYVLPDPNFCSWCSYINCIPYTETFC 508
>gi|444727806|gb|ELW68284.1| Inactive rhomboid protein 2 [Tupaia chinensis]
Length = 1213
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + + LE+ G+ R+ +++++SG G+L SA+F+
Sbjct: 941 QFYRLWLSLFLHAGVIHCLVSVVFQMTVLRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 1000
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L ++ A G+LP +DN A
Sbjct: 1001 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLHLSAVMLFLFACGLLPWIDNIA 1060
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HI GF+SG LL F FL FG
Sbjct: 1061 HIFGFLSGLLLAFAFLPYITFG 1082
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V+ Q W+L+ W H+ A ML L G+ + + I GF LL
Sbjct: 1021 VELFQSWQLLERPW--KAFLHLSAVMLFLFACGL-------LPWIDNIAHIFGFLSGLLL 1071
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
A I+ G S LI +W + K FL L ++ A G+LP +
Sbjct: 1072 AFAFLPYITFGTSDKY------RKRALILSWQLLERPWKAFLHLSAVMLFLFACGLLPWI 1125
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLV 304
DN AHI GF+SG LL F FL Y G S R++ L +VSL LV
Sbjct: 1126 DNIAHIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LV 1168
Query: 305 IVGLTLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
GL LV L N W YL+C+P TSR+ + E
Sbjct: 1169 FAGLFASLVTWLYVHPIN--WPWIEYLTCLPFTSRFCEKYE 1207
>gi|145251413|ref|XP_001397220.1| DHHC zinc finger membrane protein [Aspergillus niger CBS 513.88]
gi|134082753|emb|CAK46736.1| unnamed protein product [Aspergillus niger]
Length = 513
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 55/272 (20%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I ++H G HI N++ + +G+ +E+ G+ R ++Y+ S
Sbjct: 234 GSLDDKP--EPNQWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVAS 291
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W + + +++ IA++
Sbjct: 292 GIWGFVLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVS 351
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSG--------- 280
+G+LP +DNFAHIGGFI G LG L +R + G Y A+SG
Sbjct: 352 FVLGLLPGLDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPDD 411
Query: 281 --------------------------YSALSRRKFMTYQCILWIV-------SLVLVIVG 307
+ L+ F + LW +LV V+VG
Sbjct: 412 NQKVNTGPSLVDFLKGRRTRTGAGASNNKLNPVNFFRGRKPLWWAWWLVRAGALVAVLVG 471
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
L +V + +N CSWC+ LSC+P + W
Sbjct: 472 FILLIVDFYKYPKSN--CSWCYRLSCLPVNGW 501
>gi|251778447|ref|ZP_04821367.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082762|gb|EES48652.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 321
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Query: 130 HQG--WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+QG WRL+TC +LHGG+ H+L NM +L ++G ++E+ FG + ++Y +S S L
Sbjct: 180 YQGEVWRLVTCAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSAITSSSLGV 239
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDN 246
++ ISVGASGA+FGLLG++L I ++ L L+ +I +NL +G + ++DN
Sbjct: 240 ALNKNTISVGASGAIFGLLGAILVFSIKQRHKVEKEYILNLIGVIILNLLIGFNISNIDN 299
Query: 247 FAHIGGFISGFLLGFVFL 264
HIGGF+ G ++ + +
Sbjct: 300 LGHIGGFLGGVIMARILI 317
>gi|74786304|sp|Q695T8.1|RHBL4_TOXGO RecName: Full=Rhomboid-like protease 4
gi|47500379|gb|AAT29067.1| rhomboid-like protease 4 [Toxoplasma gondii]
Length = 641
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW-TIYTNKHFLTL 228
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +I L
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 439
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW- 271
++++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 440 MIVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSWC 499
Query: 272 --------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 500 VPKATQQKLLERAKARKAEAIRRRKLQAIQ 529
>gi|395334565|gb|EJF66941.1| rhomboid-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 360
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 66/286 (23%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALD---VSKVVD------------------------- 128
FSF+P NP+LGPSS L ++GA + V D
Sbjct: 81 FSFKPVV-NPMLGPSSSALIELGARFPPCMKNVTDFPITTAVPCLNNTDNPATQLCSLED 139
Query: 129 -----------KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
Q +R IT +LH G+ H L NML+ + + ++E+E G I +LY+
Sbjct: 140 ICGFGGFHNEVPDQWFRFITPIFLHAGLIHFLLNMLAQMTVSAQVEREMGTIAFLILYLA 199
Query: 178 SGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAI 234
+G G++L F + + SVGASGA+FG + +L +W T K + +++ + I
Sbjct: 200 AGIFGNVLGGNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYTYQPGKKLVFMIIELVI 259
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
+A+G +P+VDNFAH+GG + G + AL + S R ++
Sbjct: 260 GVAIGFIPYVDNFAHLGGLLMG---------------LLVGMALYPIISPSTR----HRT 300
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
I+ + L+ V + + L V+LLR +D CSWC YLSC+P+S
Sbjct: 301 IIIALRLIAVPLAIVL-FVVLLRNFYTSDPYAACSWCRYLSCIPSS 345
>gi|397642301|gb|EJK75152.1| hypothetical protein THAOC_03139 [Thalassiosira oceanica]
Length = 399
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 17/182 (9%)
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
P NP++GP TL GA + +V+ + +RL+T +LH G+ H+L N++ +G
Sbjct: 136 PLSINPMIGPYPDTLNYWGAKNAVLIVEDGELYRLVTPIFLHAGLIHLLGNVMVQAEVGN 195
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL------- 213
R E+E+G + ++Y+ S G S+ S F+ NISVG+SGA+ GL G+ SE+
Sbjct: 196 RWEKEWGSVIWMIIYMGSAVGSSIASTCFMPDNISVGSSGAVMGLFGAKFSEIFLLCCER 255
Query: 214 ---ITNWTI-YTNKHFLTLVV--IIAINLAVGILPHVDNFAHIGGFISGFLLG---FVFL 264
I + K + LVV +I ++L + +P+VD AH+GG ++GF+LG F F
Sbjct: 256 SRSIRDLAAEKARKRQVCLVVGGLIIVSL-MSFIPYVDWAAHLGGMVAGFVLGLVCFSFK 314
Query: 265 IR 266
IR
Sbjct: 315 IR 316
>gi|237832509|ref|XP_002365552.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
gi|211963216|gb|EEA98411.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
Length = 664
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 343 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 402
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW-TIYTNKHFLTL 228
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +I L
Sbjct: 403 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 462
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW- 271
++++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 463 MIVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSWC 522
Query: 272 --------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 523 VPKATQQKLLERAKARKAEAIRRRKLQAIQ 552
>gi|389627590|ref|XP_003711448.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|351643780|gb|EHA51641.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|440465662|gb|ELQ34973.1| rhomboid family membrane protein [Magnaporthe oryzae Y34]
gi|440480579|gb|ELQ61238.1| rhomboid family membrane protein [Magnaporthe oryzae P131]
Length = 558
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 25/258 (9%)
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
K G K +Q +R IT ++H G+ HI NML L +G +EQ G IR L+Y+
Sbjct: 283 KNGQPGPDKDNQPNQWFRFITPIFMHAGLIHIGFNMLLQLTLGREMEQAIGSIRFFLVYM 342
Query: 177 ISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIA 233
+G G +L + + S GASG+LFG++ L +L+ +W N K L + + IA
Sbjct: 343 SAGIFGFVLGGNYAGAGTPSTGASGSLFGVIALTLIDLLYSWKDRKNPVKDLLFIFLDIA 402
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA--LSGYSALSR 286
I+ +G+LP +DNF+HIGGF+ G LG L +R + G YA SG + +
Sbjct: 403 ISFVLGLLPGLDNFSHIGGFLMGLGLGVCLLHSPNSLRRRIGVDAPPYASVTSGQDSQTA 462
Query: 287 RKFMTY-------QCILW-----IVSLVLVIVGLTLGLVMLLRGVDA-NDHCSWCHYLSC 333
F + LW I + LVIV T+G ++LL + CSWC YLSC
Sbjct: 463 PPFHKNPIGFFKGRKPLWWAWWLIRAGALVIV--TIGFILLLNNFYVVHQKCSWCKYLSC 520
Query: 334 VPTSRWSCRTEPAFCSTT 351
+ + W + F +TT
Sbjct: 521 ININNWCEMEDLRFENTT 538
>gi|340502629|gb|EGR29302.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 255
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 17/190 (8%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
+E+ LL L K GA S + +++Q WR +T +LH HI NM+S + L
Sbjct: 61 EESKLLEQDQQVLIKYGANVPSLIKNENQLWRFVTAAFLHANFLHIFFNMISTFIFVSSL 120
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWT--- 218
E +GF V ++I+S GG++ SA F Q++I+VGAS ALFG++G L+ LI NW
Sbjct: 121 EHTYGFFTVFYIWILSAIGGNIFSADFATQNSIAVGASTALFGMIGLYLAYLILNWNALR 180
Query: 219 -IYTNKHFLTLVVIIAINLAV-------GIL-----PHVDNFAHIGGFISGFLLGFVFLI 265
+ + F+ + I+ +++ GI+ ++DN+ H GGFI+G L G F
Sbjct: 181 FLEDLRCFVLCMAILIVSMVFLLSSGNSGIMGGEKEQNIDNYGHFGGFITGILAGVAFPK 240
Query: 266 RPQFGWVEQR 275
++G E++
Sbjct: 241 SLEYGSYEKQ 250
>gi|302497075|ref|XP_003010538.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
gi|291174081|gb|EFE29898.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y S
Sbjct: 234 GSLDDKP--EPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSS 291
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L F I S GASG LFG+ + +L W +V+ +AI+
Sbjct: 292 GIFGFVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAIS 351
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSAL--SRRK 288
+G+LP +DNF+HIGGF++G +LG L +R + G ++ G + ++K
Sbjct: 352 FVLGLLPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNLGVDEDQKK 411
Query: 289 FMTYQCIL----------WIVSLVLVIVGLTLGLVMLLRGV-DANDHCSWCHYLSCV 334
F W + ++G+ + ++LL CSWC YLSC+
Sbjct: 412 FFKQPVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTSCSWCKYLSCL 468
>gi|354557489|ref|ZP_08976747.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550283|gb|EHC19720.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 325
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 2/143 (1%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V++++ + Q WRL T ++H G H+ N+ +L ++G E+ FG R +Y++SG
Sbjct: 183 KVNELILQGQVWRLFTSMFIHIGFLHLAFNIYALWILGSFSEERFGRWRFLFIYLLSGLA 242
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
GS+ S LF + +S GASGA+FG+LG+++ N ++ + LVVIIAINL +G++
Sbjct: 243 GSVTSFLFTDA-LSAGASGAIFGILGALVPYSWKNPRLWKSGFGKNLVVIIAINLGIGLI 301
Query: 242 -PHVDNFAHIGGFISGFLLGFVF 263
P +D +AH+GG + G +GF+F
Sbjct: 302 QPQIDIYAHLGGLLIGLAIGFLF 324
>gi|328776234|ref|XP_395087.4| PREDICTED: rhomboid family member 1 [Apis mellifera]
Length = 894
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H+ +L + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 687 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 746
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L+ ++ L +GILP VDN+A
Sbjct: 747 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYA 806
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + L FG ++R R+ ++ + C++ IV L +++ L
Sbjct: 807 HLFGFIFGFLAAYALLPFISFGQYDRR----------RKIWLIWICMILIVVLFTLLLAL 856
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ + C C +C+P +R C ++
Sbjct: 857 FYNVPVY--------ECEVCKLFNCIPFTRDFCASQ 884
>gi|380027526|ref|XP_003697473.1| PREDICTED: inactive rhomboid protein 1-like [Apis florea]
Length = 1022
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H+ +L + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 815 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 874
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L+ ++ L +GILP VDN+A
Sbjct: 875 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYA 934
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + L FG ++R R+ ++ + C++ IV L +++ L
Sbjct: 935 HLFGFIFGFLAAYALLPFISFGQYDRR----------RKIWLIWICMILIVVLFTLLLAL 984
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ + C C +C+P +R C ++
Sbjct: 985 FYNVPVY--------ECEVCKLFNCIPFTRDFCASQ 1012
>gi|220929279|ref|YP_002506188.1| rhomboid family protein [Clostridium cellulolyticum H10]
gi|219999607|gb|ACL76208.1| Rhomboid family protein [Clostridium cellulolyticum H10]
Length = 519
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 3/145 (2%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+ GA V+ ++ + Q WR I+ +LHG + H+ N SL +IG ++E+ FG R +
Sbjct: 214 LEPFGA-KVNNLIMEGQYWRFISPMFLHGDIVHLAVNCYSLYIIGSQVEKIFGRGRFLAI 272
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
Y +SGF GS S F N SVGASGA+FGL+G+ML + + + + + L+ ++ I
Sbjct: 273 YFVSGFIGSAASFAF-SLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMLII 331
Query: 235 NLAVGIL-PHVDNFAHIGGFISGFL 258
NLA G + +DN AHIGGF+ GFL
Sbjct: 332 NLAYGFMNKRIDNHAHIGGFVGGFL 356
>gi|336377068|gb|EGO05403.1| hypothetical protein SERLA73DRAFT_174545 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390111|gb|EGO31254.1| hypothetical protein SERLADRAFT_456141 [Serpula lacrymans var.
lacrymans S7.9]
Length = 419
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R IT +LH G HI+ NM++ L + ++E+E G + Y +G G++L F
Sbjct: 207 NQWFRFITAIFLHAGFIHIILNMIAQLTVSAQIEREMGSAGFLITYFAAGIFGNVLGGNF 266
Query: 190 -IQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDN 246
+ S+GASGA+FG + +L +W + + + + + + +A+G +P+VDN
Sbjct: 267 SLVGAPSIGASGAIFGTVAVTWVDLFAHWKYQYRPVRKLVFMTIELILGIALGYIPYVDN 326
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
FAH+GG G L+G Y +S K ++ ++W L + +
Sbjct: 327 FAHLGGLCMGLLVGTTL-----------------YPVISPTK--RHKLVMWGFRLAAIPL 367
Query: 307 GLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
+ L V+L+R +D CS C YLSC+PTS
Sbjct: 368 AIVL-FVVLIRNFYTSDPYAACSGCRYLSCIPTS 400
>gi|221488003|gb|EEE26217.1| rhomboid-like protease 4 [Toxoplasma gondii GT1]
Length = 634
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLT 227
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW 271
++V++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSW 491
Query: 272 ---------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 492 CVPKATQQKLLERAKARKAEAIRRRKLQAIQ 522
>gi|221508525|gb|EEE34094.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 634
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLT 227
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW 271
++V++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSW 491
Query: 272 ---------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 492 CVPKATQQKLLERAKARKAEAIRRRKLQAIQ 522
>gi|209876404|ref|XP_002139644.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555250|gb|EEA05295.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 469
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 5/160 (3%)
Query: 102 FKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIR 161
+N LLGP + + MGALD + ++ + Q RL WLH G+ H+ N+LS + +G+
Sbjct: 140 LSDNSLLGPPAQVIFNMGALD-TNLIRQGQISRLFWSFWLHTGLLHLAINVLSQIALGVI 198
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYT 221
LE + R +LY I G G+L SA+ +IS G+S F LL ++ L+ NW +T
Sbjct: 199 LETRWVVWRYIILYYIGGLVGNLASAVLDPCSISAGSSACFFALLAGVIVMLLENWK-HT 257
Query: 222 NKHFLTLVVI---IAINLAVGILPHVDNFAHIGGFISGFL 258
N F ++ I + +++ + + DN+AHIGGF +GFL
Sbjct: 258 NWQFFYVISICLATLLGISLSFMSNTDNWAHIGGFTAGFL 297
>gi|51860140|gb|AAU11320.1| rhomboid 4 [Toxoplasma gondii]
Length = 634
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLT 227
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW 271
++V++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLDERMAMTPPFSW 491
Query: 272 ---------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 492 CVPKATQQKLLERAKARKAEAIRRRKLQAIQ 522
>gi|302663450|ref|XP_003023367.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
gi|291187361|gb|EFE42749.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
Length = 507
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI N+ + L IG +E+ G+ R ++Y S
Sbjct: 262 GSLDDKP--EPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSS 319
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L F I S GASG LFG+ + +L W +V+ +AI+
Sbjct: 320 GIFGFVLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAIS 379
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSAL--SRRK 288
+G+LP +DNF+HIGGF++G +LG L +R + G ++ G + ++K
Sbjct: 380 FVLGLLPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNLGVDEDQKK 439
Query: 289 FMTYQCIL----------WIVSLVLVIVGLTLGLVMLLRGV-DANDHCSWCHYLSCV 334
F W + ++G+ + ++LL CSWC YLSC+
Sbjct: 440 FFKQPVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTTCSWCKYLSCL 496
>gi|345478808|ref|XP_001605580.2| PREDICTED: inactive rhomboid protein 2-like [Nasonia vitripennis]
Length = 824
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ HI + + LE+ G +R+ L+Y G+L SA+F+
Sbjct: 617 QFYRLFTTTFLHAGILHIAITLFVQYFLMRDLEKLTGSLRIALIYFTGALAGNLASAIFV 676
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + Y + L++I+ L +G+LP VDN+A
Sbjct: 677 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKYPRRALTKLILILVGLLLLGVLPWVDNYA 736
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + F+ FG ++R R+ F+ + C++ IV L +++GL
Sbjct: 737 HLFGFIFGFLAAYAFMPFISFGHYDRR----------RKIFVIWVCLILIVGLFGLLLGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ M C C +CVP +R C ++
Sbjct: 787 FYNVPMY--------ECELCKLFNCVPFTRDFCASQ 814
>gi|388581677|gb|EIM21984.1| rhomboid-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 476
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 24/228 (10%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ L ++ +S + Q +R + +LH G+ H+ N+ +LLV+G E+ G +
Sbjct: 259 ETMPLYELCGFGMSSTEEPSQSFRFVLPIFLHSGILHLCINLFALLVLGAYAERVLGSLA 318
Query: 171 VGLLYIISGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
+++ +G G++L F Q + SVGASGA+ GL+ L +L+ +W + L +
Sbjct: 319 FIIVFGAAGIFGNILGGNFAQVTTPSVGASGAILGLIAVSLVDLLFHWKLERRPGLLLTI 378
Query: 230 VIIA--INLAVGILPHVDNFAHIGGFISGFLLG--FVFLIRPQFGWVEQRYALSGYSALS 285
II + +G +P++DNFAHIGG++ G LL F+ +I P
Sbjct: 379 HIIELIVMFFIGYIPNLDNFAHIGGWLQGLLLSVFFIPVISPT----------------- 421
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSC 333
+K IL + +L IV L + L D +D C+WC +LSC
Sbjct: 422 -KKHRIVTIILRLAALAGSIV-LFIVLAKNFYTDDPSDGCTWCKHLSC 467
>gi|325289903|ref|YP_004266084.1| rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965304|gb|ADY56083.1| Rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
Length = 189
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
+ V L GA V++++D Q WRL+T ++H G+ H+L N +L+ +G E FG +
Sbjct: 33 TNQVVLVIFGA-KVNQLIDLGQYWRLLTSIFIHIGIVHLLLNSYALIAVGQISEAVFGHL 91
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
+ LLY++SG GG+ S LF ++ IS GASGA+FGLLG+++S N ++ + L+
Sbjct: 92 KFALLYLLSGIGGATASYLFSEA-ISAGASGAIFGLLGALVSYGWKNAGMWRSGLIANLL 150
Query: 230 VIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+I N+ G++ +DN+AHIGG ++G ++G ++ R Q
Sbjct: 151 FVIGFNILFGLITTGIDNYAHIGGMLTGLIIGIIY--RQQ 188
>gi|410728950|ref|ZP_11367038.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
gi|410596504|gb|EKQ51173.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
Length = 332
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++++ Q WRL TC +LH G+ HI NM SL +IG +++Q FG ++ ++Y S
Sbjct: 183 VNILINQGQIWRLFTCAFLHSGLIHIACNMYSLYIIGPQIQQIFGTVKYLIIYACSCLTA 242
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-L 241
SLLS ++ISVGASGA+FGL+G++L+ I + +++ +I+INL +G+ +
Sbjct: 243 SLLSYYMSPNSISVGASGAIFGLMGALLAFAIIERNRIQKRFLFSIMQVISINLFIGLSI 302
Query: 242 PHVDNFAH 249
++DNFAH
Sbjct: 303 KNIDNFAH 310
>gi|331217798|ref|XP_003321577.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300567|gb|EFP77158.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 468
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 26/213 (12%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF- 189
Q +R + +LH G+ H L N+ + +E++ G +R LLY+ SG G +L F
Sbjct: 219 QKFRFVLPLFLHAGLIHYLLNIAVQMTSSALIERQMGSLRFILLYLPSGIFGFILGGNFS 278
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ SVGASGA+F ++L +LI +W+I + + LV I L +G++P +DNF
Sbjct: 279 LVGQPSVGASGAIFSTYAAVLVDLIAHWSIEYRPTRKLVFLVFEIVAGLLLGLIPGIDNF 338
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+HIGGF G LL + F + Q +T++ + V V+ ++G
Sbjct: 339 SHIGGFSMGILLAILL-----FPVLHQT--------------ITHRWTFYTVR-VIGLIG 378
Query: 308 LTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
L V+L R D C WC YLSC PT+
Sbjct: 379 AILMFVLLYRNFFTEDPAASCDWCRYLSCWPTA 411
>gi|123485562|ref|XP_001324518.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121907402|gb|EAY12295.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 118/238 (49%), Gaps = 21/238 (8%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL+GPSS + +GA ++D + WR IT +LH G+ ++ + LL + + +E
Sbjct: 207 NPLIGPSSDNVVILGAKYGPSILD-GEIWRFITAIFLHLGLVQLVFSE-GLLFVTLPVEI 264
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH 224
+ G+ R ++ I+G G +LS+LF + I G SGA+ GL+ M+ +LIT+W K
Sbjct: 265 DGGYWRCFFIFFIAGTYGWILSSLFSPNMIGAGTSGAVLGLMMVMMCDLITSWKTAEKKG 324
Query: 225 FL--TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYS 282
F ++V IA + G+LP +DNF+HIGG I G L + L P
Sbjct: 325 FKLGKMIVCIAACIIFGLLPFMDNFSHIGGIIVGILCSIMIL--PNM------------- 369
Query: 283 ALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDH-CSWCHYLSCVPTSRW 339
+SR + + ++ +L I+ + LV R D C C ++C+ W
Sbjct: 370 TMSRASTICHGLTAFLAFPILTII-YSATLVGFYRAADTTTGLCPACRVINCINIKNW 426
>gi|239607465|gb|EEQ84452.1| rhomboid family membrane protein [Ajellomyces dermatitidis ER-3]
Length = 515
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R I +LH G+ HI NM++ L IG +E+ G+ R L+Y SG G +L A
Sbjct: 292 EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA 351
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
F + I S GASG LFG+L +L+ W + +++ I I+ +G+LP +
Sbjct: 352 NFAPAGIASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPGL 411
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
DNF+HIGGF+ G +LG L P
Sbjct: 412 DNFSHIGGFLVGLVLGISVLRSPD 435
>gi|188589117|ref|YP_001920138.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499398|gb|ACD52534.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 321
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 130 HQG--WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+QG WRL+ C +LHGG+ H+L NM +L ++G ++E+ FG + ++Y +S S L
Sbjct: 180 YQGEVWRLVACAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSAITSSSLGV 239
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDN 246
++ ISVGASGA+FGLLG++L I ++ L L+ +I +NL +G + ++DN
Sbjct: 240 ALNKNTISVGASGAIFGLLGAILVFSIKQRHKVEKEYILNLLGVIILNLLIGFNISNIDN 299
Query: 247 FAHIGGFISGFLLGFVFL 264
HIGGF+ G ++ + +
Sbjct: 300 LGHIGGFLGGIIMARILI 317
>gi|384250948|gb|EIE24426.1| U-box-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 578
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGA 120
L+ C +A FV+ ++ N+ + + +NPL+GPS L+ +G+
Sbjct: 267 LLYCLTAGQVATFVLALWQND---------------WQIEALAQNPLVGPSEAALRALGS 311
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ--EFGFIRVGLLYIIS 178
L S +VD+ Q WRLIT +L G+ ++ +++L G+ + + F + V LYI+
Sbjct: 312 LSTSDIVDRRQYWRLITSIFLCSGIIELVLAVMTLWAFGVHVSRALRFSAVSVAALYILP 371
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV---VIIAIN 235
G G+L+S SVGA A+ GL+G+ L++ I Y N H TL+ V IA
Sbjct: 372 GIVGALVSVNLSTDVPSVGAPAAVCGLIGAALADQIVGSKAYRN-HACTLIMLAVAIAQF 430
Query: 236 LAVGILP-HVDNFAHIGGFISGFLL 259
G+LP D F +G ++G L+
Sbjct: 431 TITGLLPLSSDLFFIVGSMVAGALV 455
>gi|367024201|ref|XP_003661385.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
gi|347008653|gb|AEO56140.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
Length = 551
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 29/237 (12%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+Q +R I ++H GV HI NML L + +E+ G IR L+Y+ +G G ++
Sbjct: 310 PNQWFRFIIPIFMHAGVIHIGFNMLLQLTLARDMEKSIGSIRFFLVYMSAGIFGFVMGGN 369
Query: 189 FIQSNI-SVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVD 245
+ + + S GASG+LFG++ L +L+ +W + K + +++ + I+ +G+LP +D
Sbjct: 370 YAGNAVASTGASGSLFGIIALTLLDLLYSWKDRVSPVKDLVFILLDVIISFVLGLLPGLD 429
Query: 246 NFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALS----GYSALSRRK-------- 288
NF+HIGGF+ G LG L +R + G + YA S G++A
Sbjct: 430 NFSHIGGFLMGLALGICVLHSPNSLRRRIG-DDVPYAHSDVSGGFAAQGTPPSFLKNPVG 488
Query: 289 FMTYQCILW-----IVSLVLVIVGLTLGLVMLLRGVDANDH-CSWCHYLSCVPTSRW 339
F + LW I + LV+V T+ ++LL + CSWC YLSC+P W
Sbjct: 489 FFKGRKPLWWAWWLIRAGALVLV--TVVFIVLLNNFYVDQRTCSWCKYLSCLPIHDW 543
>gi|344248590|gb|EGW04694.1| Rhomboid family member 2 [Cricetulus griseus]
Length = 238
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 35 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 94
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 95 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 154
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG +Y R++ + I++ +LV GL
Sbjct: 155 HIFGFLSGMLLAFAFLPYITFG-TSDKY---------RKRAL-------ILASLLVFAGL 197
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + +
Sbjct: 198 FASLVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYD 232
>gi|16973676|gb|AAL32367.1| C16ORF8 [Mus musculus]
Length = 856
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
G L F FL FG KF Y +C + I +V + +
Sbjct: 773 QHLGLCQRLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>gi|440748391|ref|ZP_20927644.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
gi|436483215|gb|ELP39283.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
Length = 517
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 3/158 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ P+ + L + GA S+ WRL++ +LHGG+ H+ N+ L++ + +E F
Sbjct: 340 IISPNGIELLEWGANRRSETTGG-DWWRLVSSMFLHGGIMHLFLNIYGLVIAALFVEPVF 398
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G I+ +LY SG GSL S + ++ ISVGASGA+FGL G++L L+TN K +
Sbjct: 399 GRIKYFILYFASGICGSLASIYWYENTISVGASGAIFGLYGAVLGLLLTNAFPKDGKIGI 458
Query: 227 TLVV--IIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ + + +NL VG+ +DN AHIGG +SG + G +
Sbjct: 459 LMFIGPYVGVNLLVGLTGGIDNAAHIGGLVSGAVFGII 496
>gi|340904956|gb|EGS17324.1| hypothetical protein CTHT_0066450 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 496
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 27/232 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R I ++H GV HI N+L L +G +E+ G IR L+Y+ SG G ++
Sbjct: 264 EPNQWFRFIIPIFMHAGVIHIGFNLLLQLTLGRDMERSIGSIRFFLVYMCSGIFGFVMGG 323
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
F + I S GASG+LFG++ L +L +W N K +++ + I+ +G+LP +
Sbjct: 324 NFAATGIASTGASGSLFGIIALTLLDLFYSWKDRMNPVKDLSYILLNVIISFVLGLLPGL 383
Query: 245 DNFAHIGGFISGFLLGFVFL-----IRPQFGW---VEQRYALSGYSA------------- 283
DNF+HIGGF+ G LG L +R + G + SGY++
Sbjct: 384 DNFSHIGGFLMGLALGICVLHSPNSLRRRIGGDVPYASSHVSSGYASQGTPPSFFKNPVG 443
Query: 284 -LSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
RK + + W++ +I+ L + ++ML + CSWC YLSC+
Sbjct: 444 FFKGRKPLWWA--WWLIRAGALILVLVVFILMLNNFYVYHTKCSWCKYLSCM 493
>gi|121716844|ref|XP_001275927.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
gi|119404084|gb|EAW14501.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
Length = 526
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 50/263 (19%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R I +LH G+ HI N+L + +G +E+ G+ R +Y+ SG G +L +
Sbjct: 250 NQWFRFIIPMFLHTGIIHIGFNLLVQMTMGADMERTVGWWRYAFVYLASGIWGFVLGGNY 309
Query: 190 I-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDN 246
Q S G SG+LFG+L + +L+ W + + +V+ I I+ +G+LP +DN
Sbjct: 310 AAQGESSCGCSGSLFGILALYILDLLYTWNERASPLTELIIMVIGIGISFVLGLLPGLDN 369
Query: 247 FAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSGYSALSR-------------- 286
F+HIGGF+ G G + +R + G Y A++G + S
Sbjct: 370 FSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVAMTGGAGASTEPENSKIADPGSSI 429
Query: 287 ------RK------------FMTYQCILW-------IVSLVLVIVGLTLGLVMLLRGVDA 321
RK F + LW + +LV V++G L +V + +
Sbjct: 430 TDFFKGRKGPKSAEVTGPLSFFKGRKPLWWAWWLVRLGALVAVLIGFILLIVDFYKYYTS 489
Query: 322 NDHCSWCHYLSCVPTSRWSCRTE 344
N CSWC+ LSC+P + W + E
Sbjct: 490 N--CSWCYRLSCLPVNDWCQQGE 510
>gi|406607246|emb|CCH41381.1| Rhomboid family member 1 [Wickerhamomyces ciferrii]
Length = 476
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q WRLI+ +LH G HIL N+L +G+ +E++ G +R ++Y++SG G++L
Sbjct: 230 EPNQIWRLISAMFLHAGFVHILFNLLLQCTMGLDVEKQIGTLRYMIIYLVSGISGNVLGV 289
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVI----IAINLAVGILP 242
F Q I S GASGALFG++ L + + T +++ ++ I + + L +G+LP
Sbjct: 290 NFAQDGISSSGASGALFGIIAVNLLIFVLHRDRSTVRYYGFMISILVLEVVVCLVLGLLP 349
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR---YALSGYSALSR--RKFMTYQCILW 297
+DNF HIGGF+ G LLG + L P+F +++ L G+ + S+ + + I+W
Sbjct: 350 GLDNFCHIGGFVGGLLLGLLMLNDPKFIRLKRHTRGLRLQGFGSFSKHMQNIRKDRFIIW 409
Query: 298 ----IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
IV+LVL+I +GL++ + N CSWC Y +C+P + W + +
Sbjct: 410 IIVRIVALVLIIAWF-VGLILNFKNGGGN--CSWCKYFNCLPVNNWCSQGD 457
>gi|429327760|gb|AFZ79520.1| hypothetical protein BEWA_023690 [Babesia equi]
Length = 492
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ + +G L + + + + +RL+ +LHGG HI N+ S + I +E ++GF
Sbjct: 140 PNFRIFESVGGLSANLIRNYGEWFRLVWSMFLHGGWMHIAFNVCSQVQILWIVEPDWGFW 199
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R +L+ ISG GG+L+SA+ ++VG+SGAL+GL G+++ I W + F+ +
Sbjct: 200 RTFILFFISGIGGNLMSAVLDPCGVTVGSSGALYGLYGALIPYCIEYWNTLPHPIFIIIF 259
Query: 230 VIIAI--NLAVGILPHVDNFAHIGGFISGFLLGFV 262
+I++I L G+ ++DN+AH+GG + G L GF
Sbjct: 260 LIVSIFVGLLTGLSGYIDNYAHLGGCMFGLLWGFT 294
>gi|389751526|gb|EIM92599.1| rhomboid-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 482
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 156/361 (43%), Gaps = 77/361 (21%)
Query: 23 GSGNTVHPVEEMDRPQG--VSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVN 80
G PV E P G +S + I+ K+ + VV +++ ++ +++N
Sbjct: 146 ADGQRSQPVSEKPSPWGRFLSNGKYPIEQRIEDKKRGIGRQKYPIVVWALSIAMVGVFIN 205
Query: 81 NCPKNSVSCVARFLGR-FSFQPFKENPLLGPSSVTLQKMGAL------------------ 121
NS R G SF+P NP+LGPS+ L +GA
Sbjct: 206 ELVVNS-----RAQGTPVSFKP-TVNPMLGPSTSALINLGARFPPCMKNVTDVPVSTLFP 259
Query: 122 -------------------DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
D+S + +Q WR ++ ++H G HI+ N+L+ L ++
Sbjct: 260 CLNDTANPPDITCAISEICDLSDANNPNQAWRFVSPVFVHAGFIHIILNLLAQLTAVAQI 319
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYT 221
E+E G +LY +G G++L F + S+GASGA+FG + +L +W
Sbjct: 320 EREMGSGGFIILYFAAGIFGNVLGGNFALVGVPSMGASGAIFGSIAVSWIDLFAHWQFQY 379
Query: 222 N--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+ + +++ + +A+G +P +H+GGF+ G L+G F
Sbjct: 380 RPVRKLVFMIIELVFVIAMGFIP-----SHLGGFLMGLLVGATF---------------- 418
Query: 280 GYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPT 336
Y +S + ++ I+W + L + + + L V+L R +D CSWC Y+SC+PT
Sbjct: 419 -YPVISTTR--KHKMIMWGLRLAAIPLAIVL-YVVLTRNFYTSDPYAACSWCRYISCIPT 474
Query: 337 S 337
S
Sbjct: 475 S 475
>gi|167525860|ref|XP_001747264.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774099|gb|EDQ87731.1| predicted protein [Monosiga brevicollis MX1]
Length = 511
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G D Q +RLIT L G ++LA ++ L I + +EQ G+ R G+L + S
Sbjct: 297 GLFDFVNPFIPDQWYRLITTLVLPPGTIYLLAVLVGQLYISVPIEQSIGWKRFGVLALSS 356
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAINL 236
G GG ++S +F+ I G S L+G LG++ EL +W + ++ L LV+I A+
Sbjct: 357 GVGGYIISGIFVPYEIKSGISPVLYGCLGALYIELFQSWKRVLRPARYLLWLVLITALAF 416
Query: 237 AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCIL 296
AVG L ++DNF H+GGF+ G + + L F S + + +R ++
Sbjct: 417 AVGTLKYIDNFGHVGGFVFGVVTALIVLPWETF---------SNWDKVRKR-------LI 460
Query: 297 WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
IV+ ++ + ML G +A D C C+ +C+
Sbjct: 461 AIVAAGVLALMFITSATMLFTG-EAPD-CEACYAFNCI 496
>gi|415885504|ref|ZP_11547432.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
gi|387591173|gb|EIJ83492.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
Length = 518
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL + GA + ++++ + WR T +LH G+ H+L N L+L +G +E+ +G +R
Sbjct: 207 NTSTLIRFGA-KFNPLINEGEWWRFFTPIFLHIGLLHLLMNTLALYYLGTVVERIYGNVR 265
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
L+Y+ +GF GSL S +F S +S GASGA+FG G++L + + ++ + ++V
Sbjct: 266 FMLIYLAAGFAGSLASFVFSPS-LSAGASGAIFGCFGALLYFGVIHPRLFFRTMGMNILV 324
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
++ INLA+G LP +DN HIGG I GFL
Sbjct: 325 VLGINLALGFTLPGIDNAGHIGGLIGGFL 353
>gi|407796208|ref|ZP_11143164.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407019562|gb|EKE32278.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 507
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRLI+ +LH GV H+L NML+L +G +EQ +G R ++Y ++G GS S + +
Sbjct: 227 WRLISSMFLHIGVLHLLMNMLALFYLGTAVEQIYGSFRFTMIYFLAGILGSAAS-FYFNT 285
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
+++ GASGA+FGL G++L +++ L++++AIN+ GI +P VDN H+G
Sbjct: 286 SVAAGASGAIFGLFGALLYFAWRYPSLFFRTMGWNLIILVAINIVFGITVPQVDNSGHMG 345
Query: 252 GFISGFL 258
G I GFL
Sbjct: 346 GLIGGFL 352
>gi|409051774|gb|EKM61250.1| hypothetical protein PHACADRAFT_134676 [Phanerochaete carnosa
HHB-10118-sp]
Length = 458
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 26/209 (12%)
Query: 135 LITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSN 193
IT ++H G+ HIL NML+ L +E+E G +LY +G G++L F + +
Sbjct: 251 FITPIFIHAGIIHILLNMLAQLTASAEVEKEMGSAGFLILYFAAGIFGNVLGGNFALVAA 310
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
SVGASGA+FG + +LI +W + + ++V + I +A+G +P+VDNFAHIG
Sbjct: 311 PSVGASGAIFGTVAVAWVDLIAHWKYQYRPVRKLMFMIVELVIGIAIGYIPYVDNFAHIG 370
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
G + G L+G V Y + S +R K I+W + + + + L
Sbjct: 371 GLLMGLLVGIVL------------YPI--ISTTTRHK-----VIVWAFRIAAIPIAVVL- 410
Query: 312 LVMLLRGVDAND---HCSWCHYLSCVPTS 337
V+L+R +D CSWC YLSC PTS
Sbjct: 411 FVVLIRNFYTSDPYAACSWCRYLSCFPTS 439
>gi|403411581|emb|CCL98281.1| predicted protein [Fibroporia radiculosa]
Length = 1317
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R IT +LH G+ H L NML+ + ++E+E G + +LYI SG G++L F
Sbjct: 1103 NQWFRFITPIFLHAGIIHYLLNMLAQTTVSAQVEREMGSVFFLVLYIASGTFGNVLGGNF 1162
Query: 190 -IQSNISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAINLAVGILPHVDN 246
+ SVGASGA+FG +L +W +VV + I + +G +P+VDN
Sbjct: 1163 ALVGQPSVGASGAIFGTTAIAWIDLFAHWRYQYRPGTKLAWMVVELVIGVGLGFIPYVDN 1222
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
FAH+GG + G L+G F Y + SA R +T + I V++VL +V
Sbjct: 1223 FAHLGGLLMGLLVGMAF------------YPIISPSARHRTIVITLRLIAIPVAIVLFVV 1270
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
L+ + CSWC YLSC+PTS
Sbjct: 1271 -----LIRNFYTSNPYAACSWCRYLSCIPTS 1296
>gi|313235558|emb|CBY11013.1| unnamed protein product [Oikopleura dioica]
Length = 840
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL ++H G+ H+ + +V+ LE+ G+ R+ +YI+SG G+L SA+F+
Sbjct: 606 QIYRLHLSLFIHAGILHLCITLFFQMVVLRDLEKLAGWWRIASIYILSGMVGNLASAIFV 665
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK-HFLTLVVIIAINLAV-GILPHVDNFA 248
VG SGA +GL+ + E I +W + H + + +IAI L + G+LP VDN+A
Sbjct: 666 PYKPDVGPSGAQYGLIACLFVEFIQSWQLLDQPWHAVLKLAVIAIFLFLFGLLPWVDNYA 725
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQ 274
HI GFISG LL F L FG +Q
Sbjct: 726 HIFGFISGILLSFALLPYIVFGKFDQ 751
>gi|261200367|ref|XP_002626584.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
gi|239593656|gb|EEQ76237.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
Length = 516
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R I +LH G+ HI NM++ L IG +E+ G+ R L+Y SG G +L A
Sbjct: 296 EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGA 355
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
F + I S GASG LFG+ +L+ W + +++ I I+ +G+LP +
Sbjct: 356 NFAPAGIASTGASGCLFGIFALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPGL 415
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
DNF+HIGGF+ G +LG L P
Sbjct: 416 DNFSHIGGFLVGLVLGISVLRSPD 439
>gi|47214956|emb|CAG10778.1| unnamed protein product [Tetraodon nigroviridis]
Length = 903
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H ++ + + LE+ G++R+ ++Y+ SG G+L SALF+
Sbjct: 694 QFYRLWLSLFLHAGLLHCAVTVVFQMTVLRDLEKLAGWVRISIIYVFSGITGNLASALFL 753
Query: 191 QS---------NISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVG 239
++ VG +G+ FGLL + EL W + K FL L+ I+ G
Sbjct: 754 PYRAESTLGVVSLQVGPAGSQFGLLACLFVELFQAWQMLEKPWKAFLKLLTIVLFLFLCG 813
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIV 299
+LP +DN AHI GF+SG LL F FL FG ++ Y+ + I
Sbjct: 814 LLPWMDNIAHIFGFLSGLLLSFAFLPYLTFGTSDK-----------------YRKRVLIA 856
Query: 300 SLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
+L +GL L++ N H W +L+C+P
Sbjct: 857 LSLLAYIGLFASLIVWFYIYPINWH--WLEHLTCLP 890
>gi|401409155|ref|XP_003884026.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
gi|325118443|emb|CBZ53994.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
Length = 646
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF
Sbjct: 324 PNARILRHLGGLETNYIREYSETFRLFTSMYMHGGWMHILINLSCQIQILWIIEPDWGFW 383
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLT 227
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +
Sbjct: 384 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 443
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
++V++ I + G+ DN+AH+GG + G L GF
Sbjct: 444 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 478
>gi|452986411|gb|EME86167.1| rhomboids protein [Pseudocercospora fijiensis CIRAD86]
Length = 514
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 123/265 (46%), Gaps = 37/265 (13%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD D Q WR I +LH G+ HI N+L L +G +E G IR +LY +
Sbjct: 236 GSLDDKPAPD--QWWRFIVPIFLHAGIIHIGFNLLLQLTLGRDVELLIGSIRFAILYFAA 293
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G +L F + I S G SG+LFG+L +L +L+ NW + K L +++ I I
Sbjct: 294 GIFGFILGGNFAATGIASTGCSGSLFGILAIILLDLLYNWRDRQSPIKDLLFIIIDILIA 353
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
+G+LP +DNF+HIGGF+ G +LG L P V +R S S ++ MT
Sbjct: 354 FVLGLLPGLDNFSHIGGFVMGLVLGICLLRSPSS--VARR--TSQLDPFSYQQVMTPASR 409
Query: 296 -----------------------LWIVSLVLVIVGLTLGLVMLLRGVDA-NDHCSWCHYL 331
W + L +VG+ + ++LL+ CSWC YL
Sbjct: 410 SEGLKSFVKNPQGFFKDRRGGWWAWWLVRALALVGVLIAFILLLKNFYVWRTGCSWCKYL 469
Query: 332 SCVPT----SRWSCRTEPAFCSTTQ 352
SC+P + W F ST Q
Sbjct: 470 SCLPITVSGTNWCNVGNLDFTSTNQ 494
>gi|386714819|ref|YP_006181142.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384074375|emb|CCG45868.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 510
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG-FGGSLLSALFIQ 191
WR+ + +LH G+ H+L NML+L IGI +E+ +G R ++Y+++G FGG +++ +
Sbjct: 228 WRIGSSMFLHIGLLHLLMNMLALYYIGIAVERIYGTWRFSVIYLLAGIFGG--VASFMLN 285
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHI 250
+++ GASGA+FGL G++L + + ++ L+ +IA+N+A GI+ P VDN AH+
Sbjct: 286 PHVAAGASGAIFGLFGALLYFGVRHRQLFFKTMGWNLIFVIALNIAFGIMVPQVDNGAHM 345
Query: 251 GGFISGFLLGFVF-LIRPQFGWVEQRYALSGY 281
GG I GF+ F L + W+ Q AL+GY
Sbjct: 346 GGLIGGFIASAGFNLPKRNDKWL-QGIALTGY 376
>gi|307192271|gb|EFN75561.1| Rhomboid family member 1 [Harpegnathos saltator]
Length = 872
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H+ +L + LE+ G +R+ +Y I G+L SA+F+
Sbjct: 665 QFYRLFTTTFLHAGIVHLAITLLIQYFLMRDLEKLTGSLRIAFIYFIGALAGNLASAIFV 724
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L++I+ L +GILP VDN+A
Sbjct: 725 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILMGLLVLGILPWVDNYA 784
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQR 275
H+ GFI GFL + + FG ++R
Sbjct: 785 HLFGFIFGFLAAYALMPFISFGHYDRR 811
>gi|66363006|ref|XP_628469.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|46229491|gb|EAK90309.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|323508507|dbj|BAJ77147.1| cgd7_3020 [Cryptosporidium parvum]
gi|323510219|dbj|BAJ78003.1| cgd7_3020 [Cryptosporidium parvum]
Length = 464
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 90 VARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHIL 149
+++ +S + L GP + MGALD + +V Q RL WLH G H+
Sbjct: 136 ISQLTNGYSIIKIPDGYLFGPPPQVVFDMGALD-TNLVRNGQLARLFWSFWLHTGFIHLF 194
Query: 150 ANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSM 209
N+ +++GI LE + R +LY++ G G+L SA+ IS G+S F LL +
Sbjct: 195 INLSCQIILGIILETRWVIWRYAILYLLGGISGNLASAVLDPCTISAGSSACFFALLAGI 254
Query: 210 LSELITNWTIYTNKHFLTLVVIIA--INLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ L+ NW + L+VIIA I +++ + + DN+AHIGGF++G L F
Sbjct: 255 IVLLLENWRNSRWQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSFA 309
>gi|67606699|ref|XP_666769.1| F6D8.20 [Cryptosporidium hominis TU502]
gi|54657827|gb|EAL36541.1| F6D8.20 [Cryptosporidium hominis]
Length = 464
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G+ ++ V++L F ++I I V +++ +S + L
Sbjct: 105 GDSSVTRLKVSYLATTFFASSIIFVFIQELV----------ISQLTNGYSMIKIPDGYLF 154
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GP + MGALD + +V Q RL WLH G H+ N+ +++GI LE +
Sbjct: 155 GPPPQVVFDMGALD-TNLVRNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRWVI 213
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL 228
R +LY++ G G+L SA+ IS G+S F LL ++ L+ NW + L
Sbjct: 214 WRYAILYLLGGISGNLASAVLDPCTISAGSSACFFALLAGIIVLLLENWRNSRWQFLYVL 273
Query: 229 VVIIA--INLAVGILPHVDNFAHIGGFISGFLLGFV 262
+VIIA I +++ + + DN+AHIGGF++G L F
Sbjct: 274 LVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSFA 309
>gi|212530860|ref|XP_002145587.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
gi|210074985|gb|EEA29072.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
Length = 529
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 52/269 (19%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I +LH G+ HI NML + +G +E+ G+ R L+Y S
Sbjct: 250 GSLDDQP--EPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSS 307
Query: 179 GFGGSLLSALFIQSNIS-VGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G ++ + IS GASGALFGL+ L +L+ W + + L++ I ++
Sbjct: 308 GIFGFVMGGNYAAQGISSTGASGALFGLVALSLLDLLYTWGERRSPWVELIFLIIEIGVS 367
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRK-- 288
+G+LP +DNF+HIGGFI G +G + IR + G + Y + A R
Sbjct: 368 FVLGLLPGLDNFSHIGGFIMGLAMGLCMMRSPNYIRERIGLQRRPYVVMSGGAGPRPTDD 427
Query: 289 --------------------------------FMTYQCILWIV------SLVLVIVGLTL 310
F + + W +LV VI+G L
Sbjct: 428 DNNSNVVNNNNNNNTDNSKQNSPMTPGRFIGVFQGRKPLWWAWWLVRAGALVAVIIGFIL 487
Query: 311 GLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+ + +N CSWC+ LSC+P W
Sbjct: 488 LVTNFYKYPKSN--CSWCYRLSCLPIKNW 514
>gi|282851375|ref|ZP_06260740.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
gi|282557343|gb|EFB62940.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
Length = 241
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSV--TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ TL ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FIVFILETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YVGQFMEPLLGHWRFLSVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y K L L + INLA+ + H+D H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGKQALALAI---INLALDLFASHIDILGHLGGLISGFLLGIIF 192
>gi|116292571|gb|ABJ97617.1| rhomboid-4 [synthetic construct]
Length = 796
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
+G L+ + + + + +RL +LHGG HIL N++ + I +E ++G IR GLL+ I
Sbjct: 482 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 541
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HFLTLVVIIA 233
SG G+LLSA+ +++G+SG+L+GL+G++ + I W F+ LVV+
Sbjct: 542 SGVTGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFLVVMFG 601
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGF 261
I VG+ + DN+AHIGG + G L GF
Sbjct: 602 I--IVGMFGYTDNYAHIGGCLGGVLFGF 627
>gi|426254137|ref|XP_004020741.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1 [Ovis
aries]
Length = 857
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 140 WLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGAS 199
+LH GV H L ++ + + LE+ G+ R+ +++I+SG G+L SALF+ VG S
Sbjct: 663 FLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRISIIFILSGITGNLASALFLPYRAEVGNS 722
Query: 200 GALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGF 257
G G +W I + F L+ ++ G+LP +DNFAHI GFISG
Sbjct: 723 GHSGEWAGCHYPTWAQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGL 782
Query: 258 LLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIVGLTLGLVML 315
L F FL FG KF Y +C + + LV + + L ++
Sbjct: 783 FLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLVFLGLLAGLVVLFY 825
Query: 316 LRGVDANDHCSWCHYLSCVP 335
V C WC +L+C+P
Sbjct: 826 FYPV----RCEWCEFLTCIP 841
>gi|71002610|ref|XP_755986.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|66853624|gb|EAL93948.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|159130040|gb|EDP55154.1| rhomboid family membrane protein [Aspergillus fumigatus A1163]
Length = 524
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 169/434 (38%), Gaps = 117/434 (26%)
Query: 10 IQIKVNSKGGGGSGSGNTV-HPVEEMDRPQGV--SAPPPAVYGEIKHS--KKWVTWLIPC 64
I +K +S+ GS N + HP + P + + PP AV K KK + W+
Sbjct: 89 IPLKAHSQDPNGSPPPNWMQHPTQYAPDPSAMEPAGPPVAVTRRQKKGIFKKKIAWVTYT 148
Query: 65 FVVANIAMFVITMYVNNCPKNSVSCVARFLGR-FSFQPFKENPLLGPSSVTLQKMGALDV 123
+A + +F++ + N A+ G P + NP++GPS MGA
Sbjct: 149 LTLAQVIVFIVELVKN----------AQLTGSPIELHP-QFNPMIGPSPYVQINMGARYT 197
Query: 124 S--KVVDK-------------------------------------------------HQG 132
K VDK +Q
Sbjct: 198 PCMKNVDKIQNSQVEFLFPCPNATSTADFVCTLSELCGFDGVPNPVPGGTLDDRPEPNQW 257
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI-Q 191
+R I +LH G+ HI N+L + + +E+ G+ R +Y+ SG G +L + Q
Sbjct: 258 FRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGFVLGGNYAAQ 317
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAH 249
S G SG+LFG+L + +L+ W ++ + +V+ IAI+ +G+LP +DNF+H
Sbjct: 318 GESSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGLLPGLDNFSH 377
Query: 250 IGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRK---------------- 288
IGGFI G G + +R + G Y +A +
Sbjct: 378 IGGFIMGLASGLCIMRSPNALRERIGLARNPYVAMTGAAGATADPGNKVTNPGSTIAEFF 437
Query: 289 ----------------FMTYQCILW-------IVSLVLVIVGLTLGLVMLLRGVDANDHC 325
F + LW + +LV V++G L +V + +N C
Sbjct: 438 KAHKGSKSSKDSSALGFFKGRKPLWWAWWLVRLGALVAVLIGFILLIVDFYKYHTSN--C 495
Query: 326 SWCHYLSCVPTSRW 339
SWC+ LSC+P + W
Sbjct: 496 SWCYRLSCLPVNDW 509
>gi|342321566|gb|EGU13499.1| Hypothetical Protein RTG_00227 [Rhodotorula glutinis ATCC 204091]
Length = 690
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R +LH GV H+L NML+ ++E+ G R ++Y+ +G G +L A F
Sbjct: 462 NQSFRFFVPIFLHAGVVHLLLNMLAQCTSSAQVERMMGTPRFLIVYLAAGIFGFVLGANF 521
Query: 190 -IQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDN 246
+ SVGASGA+FG ++L +L+ +W I + L LVV I I L +G +P VDN
Sbjct: 522 ALVGQPSVGASGAIFGTHAALLVDLLAHWKIEYRPLRKLLFLVVEIIIGLGLGWVPGVDN 581
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
FAH+GGF+ G L + + + + Y I + + ++V
Sbjct: 582 FAHLGGFLMGLLTSVLL-----------------FPIVHPSRTHKYIFIGLRLLALPLVV 624
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTS 337
+ + LV D CSWC YLSC PT+
Sbjct: 625 VVFVVLVRNFYTGDPATACSWCRYLSCWPTA 655
>gi|300361225|ref|ZP_07057402.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
gi|300353844|gb|EFJ69715.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
Length = 228
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSV--TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ TL ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FIVFILETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
IG +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YIGQFMEPLLGHWRFLSVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y K L L + INLA+ + H+D H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGKQALALAI---INLALDLFASHIDILGHLGGLISGFLLGIIF 192
>gi|387929721|ref|ZP_10132398.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
gi|387586539|gb|EIJ78863.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
Length = 518
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 93/149 (62%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL + GA + ++ + + WR T +LH G+ H+L N LSL +G +E+ +G +R
Sbjct: 207 NTSTLIRFGA-KFNLLIIEGEWWRFFTPIFLHVGLLHLLMNTLSLYYLGTVVERLYGNVR 265
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
L+Y+ +GF GSL S +F S +S GASGA+FG G++L + + ++ + ++V
Sbjct: 266 FLLIYLFAGFAGSLTSFVFSPS-LSAGASGAIFGCFGALLYFGVIHPGLFFRTMGMNILV 324
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
++ INLA+G LP +DN HIGG I GFL
Sbjct: 325 VLGINLALGFTLPGIDNAGHIGGLIGGFL 353
>gi|225682090|gb|EEH20374.1| rhomboid family membrane protein [Paracoccidioides brasiliensis
Pb03]
Length = 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
+ + + +Q +R I +LH G+ HI NM++ L IG +E+ G+ R ++Y SG G
Sbjct: 525 IKQKPEPNQWFRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFG 584
Query: 183 SLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVG 239
+L A F S I S GASG L G+L +L W + +++ IAI+ +G
Sbjct: 585 FILGANFAASGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLG 644
Query: 240 ILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+LP +DNF+HIGGF+ G +LG L P
Sbjct: 645 LLPGLDNFSHIGGFLVGLVLGISLLRSPD 673
>gi|309803097|ref|ZP_07697194.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|309806110|ref|ZP_07700129.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|329920170|ref|ZP_08277001.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|349611504|ref|ZP_08890739.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
gi|308164605|gb|EFO66855.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|308167465|gb|EFO69625.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|328936624|gb|EGG33068.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|348608597|gb|EGY58577.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
Length = 232
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN-----WTIYTNKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N I + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAVIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|399217023|emb|CCF73710.1| unnamed protein product [Babesia microti strain RI]
Length = 949
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ + +G L+ +K+ + + +RL+ +LHG V H++ N+ + +E ++GF
Sbjct: 181 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 240
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R LY +SG G+LLSA+ +VG+SGA++GL+G+++ I W + F L+
Sbjct: 241 RTAGLYFVSGIFGNLLSAILDPCGTTVGSSGAMYGLMGALIPYCIEYWKTIP-RPFSILI 299
Query: 230 ---VIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
+ I I L G+ + DN+AH+GG I+G L GF
Sbjct: 300 FNCIFIIIGLISGLAGYTDNYAHLGGCIAGILWGF 334
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ + +G L+ +K+ + + +RL+ +LHG V H++ N+ + +E ++GF
Sbjct: 666 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 725
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN----KHF 225
R LY +SG G+LLSA+ +VG+SGA++GL+G+++ I I N K +
Sbjct: 726 RTAGLYFVSGIFGNLLSAILDPCGTTVGSSGAMYGLMGALIPYCIVR--ILENDCASKVY 783
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
+ L I+ NL + ++ + ++ +GGFI+G L GF
Sbjct: 784 IVLCDIVCGNLLIDVVIWIVDW--VGGFIAGVLWGF 817
>gi|66350796|emb|CAI95607.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 231
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 28/199 (14%)
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYT 221
LE+ G+ R+ ++Y++SG G+L SA+F+ VG +G+ FG+L + EL +W I
Sbjct: 59 LEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILA 118
Query: 222 N--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+ F L+ ++ G+LP +DNFAHI GFISG L F FL FG +
Sbjct: 119 RPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLPYISFGKFD------ 172
Query: 280 GYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRW 339
L R++ C + I +V + + L ++ + V C WC +L+C+P +
Sbjct: 173 ----LYRKR-----CQIIIFQVVFLGLLAGLVVLFYVYPV----RCEWCEFLTCIPFT-- 217
Query: 340 SCRTEPAFCSTTQDGNQLN 358
FC + QL+
Sbjct: 218 -----DKFCEKYELDAQLH 231
>gi|225026638|ref|ZP_03715830.1| hypothetical protein EUBHAL_00889 [Eubacterium hallii DSM 3353]
gi|224956008|gb|EEG37217.1| peptidase, S54 family [Eubacterium hallii DSM 3353]
Length = 343
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 12/155 (7%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+D VV+KHQ +RL T +LH G H+L NML LLVIG RLE+ G + L+YI +
Sbjct: 185 GAIDWMDVVEKHQYYRLFTSMFLHFGADHLLQNMLILLVIGCRLERITGKLSYLLIYIGA 244
Query: 179 GFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLT------L 228
G G+ S +F N +S GASGA+FG++G +L +I++ I +H + +
Sbjct: 245 GLIGAGTSIIFTLGNNPNTVSAGASGAIFGVMGGLLYCIISD-IIQKKRHRVEEIGLTGM 303
Query: 229 VVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFV 262
+ ++A L+ G +DN AHIGG + GFL+ +
Sbjct: 304 IFMVASALSYGFFSTGIDNAAHIGGLVGGFLITMI 338
>gi|358401351|gb|EHK50657.1| hypothetical protein TRIATDRAFT_52595 [Trichoderma atroviride IMI
206040]
Length = 510
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 80/361 (22%)
Query: 49 GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLL 108
G + ++K + WL+ F +A A+F+ + +N + + + + F NP++
Sbjct: 151 GMLGSNRKRIPWLVYIFSLAQAAVFIAEVV-----RNGILTGSPIMIKPQF-----NPMI 200
Query: 109 GPSSVTLQKMGAL----------------------------------------------- 121
GPS+ L MGA
Sbjct: 201 GPSTQVLINMGARYVPCMHNIKEIQGSTIEVQFLCPNATKSTQFCPLSELCGFGGDVPNP 260
Query: 122 ----DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
+ ++ +Q +R I ++H G+ HI N+L L IG +E G IR L+Y+
Sbjct: 261 KFDGNANQSPAPNQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMS 320
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAI 234
+G G ++ + I S GASG+LFG++ L +L+ +W + K L +++ + I
Sbjct: 321 AGIFGFVMGGNYAAPGIASTGASGSLFGIIALTLIDLLYSWKDRRSPVKDLLFIIIDMVI 380
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALSGYSALSRRKF 289
+ +G+LP +DNF+HIGGF+ G +LG L +R + G A+ G F
Sbjct: 381 SFVLGLLPGLDNFSHIGGFLMGLVLGICLLHSPNSLRRRIGPDPFYSAVPGAQDPDTVPF 440
Query: 290 MTYQC-----------ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
W+V ++ + + +V++ + CSWC YLSC+P +
Sbjct: 441 YKNPVGFFKGRKPLWWAWWLVRAAALVAVIVVFVVLIHNFYKIGNTCSWCKYLSCLPVNG 500
Query: 339 W 339
W
Sbjct: 501 W 501
>gi|124506059|ref|XP_001351627.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
gi|23504554|emb|CAD51434.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
Length = 759
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
+G L+ + + + + +RL +LHGG HIL N++ + I +E ++G IR GLL+ I
Sbjct: 445 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 504
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HFLTLVVIIA 233
SG G+LLSA+ +++G+SG+L+GL+G++ + I W F+ LVV+
Sbjct: 505 SGVTGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFLVVMFG 564
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGF 261
I VG+ + DN+AHIGG + G L GF
Sbjct: 565 I--IVGMFGYTDNYAHIGGCLGGVLFGF 590
>gi|119482167|ref|XP_001261112.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
gi|119409266|gb|EAW19215.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
Length = 524
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 51/268 (19%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G LD + +Q +R I +LH G+ HI N+L + + +E+ G+ R +Y+ S
Sbjct: 246 GTLDDRP--EPNQWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLAS 303
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SG+LFG+L + +L+ W ++ + +V+ IAI+
Sbjct: 304 GIWGFVLGGNYAAQGESSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAIS 363
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSGYSALSRRK- 288
+G+LP +DNF+HIGGF+ G G + +R + G Y A++G + S
Sbjct: 364 FVLGLLPGLDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVAMTGAAGASADPG 423
Query: 289 ------------------------------FMTYQCILW-------IVSLVLVIVGLTLG 311
F + LW + +LV V++G L
Sbjct: 424 NKVTNPGSTIAEFFKAHKGSKSSKDSSALGFFKGRKPLWWAWWLVRLGALVAVLIGFILL 483
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRW 339
+V + +N CSWC+ LSC+P + W
Sbjct: 484 IVDFYKYHTSN--CSWCYRLSCLPVNDW 509
>gi|116630012|ref|YP_815184.1| membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311110357|ref|ZP_07711754.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
gi|116095594|gb|ABJ60746.1| Membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311065511|gb|EFQ45851.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
Length = 228
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSV--TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ TL ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FIVFILETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YVGQFMEPLLGHWRFLSVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y K L L + INLA+ + H+D H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGKQALALAI---INLALDLFASHIDILGHLGGLISGFLLGIIF 192
>gi|223994881|ref|XP_002287124.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976240|gb|EED94567.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 866
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 9/156 (5%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA +++ Q RLIT +LHGG+ H++AN SL +G+ +E+ FG R Y++S
Sbjct: 559 GAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLS 618
Query: 179 GFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIY---TNKHFLTLVVIIAI 234
G G+++SA IQS N +VGASGA+FGL+G+ + L N ++ + L+ I
Sbjct: 619 GIMGNVVSA--IQSPNPAVGASGAIFGLVGAYYTFLSRNQDLFGYSGQRQKSALIETIGF 676
Query: 235 NLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQF 269
NL +G+ P +DN+ HIGGFI G +G +L P+
Sbjct: 677 NLLLGMTNPMIDNWGHIGGFIGG--VGCAYLFGPKL 710
>gi|170083865|ref|XP_001873156.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650708|gb|EDR14948.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 29/217 (13%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R +T +LH G+ HIL NML+ + + ++E+E G L Y +G G++L F
Sbjct: 129 NQWFRFVTPIFLHAGIIHILLNMLAQITLSAQIEKEMGSGGFLLTYFAAGIFGNVLGGNF 188
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILP---H 243
+ S+GASGA+FG + +L +W + + + + + + I +AVG +P
Sbjct: 189 SLVGVPSLGASGAIFGTIAVTWVDLFAHWKYHYRPVRKLIFMTIELLIGIAVGYIPCESF 248
Query: 244 VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVL 303
+D +HIGGF+ G L+G Y +S K ++ I+WI L
Sbjct: 249 IDKLSHIGGFVMGLLVGTTL-----------------YPVISASK--RHKLIMWIFRLAA 289
Query: 304 VIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
+ + + L V+L+R +D CS C YLSC PTS
Sbjct: 290 IPLAILL-FVVLVRNFYTSDPYAACSGCRYLSCFPTS 325
>gi|440302909|gb|ELP95215.1| hypothetical protein EIN_430110 [Entamoeba invadens IP1]
Length = 335
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 8/189 (4%)
Query: 98 SFQPFKE---NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLS 154
S Q F++ N +LGP+S + +GA D K+ ++++ WRLIT +LH G+ H++ N+
Sbjct: 119 SLQGFEKPSINWMLGPTSDAMDILGAKDAKKMKEQYELWRLITPIFLHAGIIHLVCNLSM 178
Query: 155 LLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI 214
L +G+ +E+ +R ++Y + G G+ S + + VGASGAL + G L ++I
Sbjct: 179 QLRLGMIIERRMNTLRFLIVYFVGGIIGNCFSVMIFPTTQGVGASGALLAVFGGFLIDII 238
Query: 215 TNWTIYTNKHFLTLV----VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFG 270
N + ++ +++L+ + I + +P +D AHI GFI G + L Q
Sbjct: 239 LNKNKFPSRQWISLIGQLLISTIIIFVLSFMPGIDYAAHIFGFIGGAVAALGLLCH-QNE 297
Query: 271 WVEQRYALS 279
W+ +R L
Sbjct: 298 WINKRMWLK 306
>gi|68071399|ref|XP_677613.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497796|emb|CAH98853.1| conserved hypothetical protein [Plasmodium berghei]
Length = 490
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 6/151 (3%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
++G L+ + + + + +RL +LHGG+ HI+ N++ + I +E ++GF+R L+
Sbjct: 176 NQLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIVFNVICQIQILWMIEPDWGFLRTLFLF 235
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----FLTLVVI 231
ISG G+LLSA+ +++G+SG+L+GL+G++ + + W F+ LVVI
Sbjct: 236 FISGITGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMILVVI 295
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
I +G+ + DN+AHIGG + G L GF
Sbjct: 296 FGI--FIGMFGYTDNYAHIGGCLGGILYGFA 324
>gi|82540667|ref|XP_724634.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479343|gb|EAA16199.1| Arabidopsis thaliana F6D8.20 [Plasmodium yoelii yoelii]
Length = 659
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 6/151 (3%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
++G L+ + + + + +RL +LHGG+ HI+ N++ + I +E ++GF+R L+
Sbjct: 344 NQLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLF 403
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----FLTLVVI 231
ISG G+LLSA+ +++G+SG+L+GL+G++ + + W F+ LVVI
Sbjct: 404 FISGITGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMILVVI 463
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
I +G+ + DN+AHIGG + G L GF
Sbjct: 464 FGI--FIGMFGYTDNYAHIGGCLGGILYGFA 492
>gi|376261459|ref|YP_005148179.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373945453|gb|AEY66374.1| putative membrane protein [Clostridium sp. BNL1100]
Length = 519
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+ GA V+ ++ + Q WR +LH + H+ N S+ +IG ++E+ FG R +
Sbjct: 214 LEPFGA-KVNNLIMEGQYWRFFAPMFLHADIVHLAVNCYSIYIIGSQVEKIFGRGRFLAI 272
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
Y +SGF GS S F N SVGASGA+FGL+G+ML + + + + + L+ ++ I
Sbjct: 273 YFVSGFIGSAASFAF-SLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMLVI 331
Query: 235 NLAVGIL-PHVDNFAHIGGFISGFL 258
NLA G + +DN AHIGGF+ GFL
Sbjct: 332 NLAYGFMNKRIDNHAHIGGFVGGFL 356
>gi|418635278|ref|ZP_13197657.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
gi|374842000|gb|EHS05452.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
Length = 485
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 11/157 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S++ L MG L VV H W RLIT +LH HIL NMLSL + G +E G +
Sbjct: 181 SNIKLLDMGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPM 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----F 225
++ +LYIISG G+ LS F +S GASGA+FGL+G+++ +I + +Y+ K
Sbjct: 239 KMLILYIISGLFGNFLSLSFNTDTVSAGASGAIFGLIGAIIVMMIIS-KVYSRKMIGQLL 297
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ LV++I +L +L +V+ AH+GGFISG LL ++
Sbjct: 298 IALVILIGFSL---LLSNVNIMAHLGGFISGLLLIYI 331
>gi|42519493|ref|NP_965423.1| hypothetical protein LJ1618 [Lactobacillus johnsonii NCC 533]
gi|385826288|ref|YP_005862630.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837977|ref|ZP_12484215.1| GlpG protein [Lactobacillus johnsonii pf01]
gi|41583781|gb|AAS09389.1| hypothetical protein LJ_1618 [Lactobacillus johnsonii NCC 533]
gi|329667732|gb|AEB93680.1| hypothetical protein LJP_1358c [Lactobacillus johnsonii DPC 6026]
gi|338761520|gb|EGP12789.1| GlpG protein [Lactobacillus johnsonii pf01]
Length = 228
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSV--TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ TL ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FVVFIIETIMGGSTNINTLVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YMGQFMEPLLGHWRFLTVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y + L L + INLA+ + H+D H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGRQALALAI---INLALDLFASHIDILGHLGGLISGFLLGIIF 192
>gi|402572950|ref|YP_006622293.1| hypothetical protein Desmer_2505 [Desulfosporosinus meridiei DSM
13257]
gi|402254147|gb|AFQ44422.1| putative membrane protein [Desulfosporosinus meridiei DSM 13257]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + WR +T ++H G H+L N+ +L +G E+ FG R ++YI+SG GG
Sbjct: 168 VNPLIQAGELWRFLTSVFIHIGFLHLLFNLYALWSLGPISERNFGHWRFLVIYIMSGLGG 227
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL- 241
S +++ F + +S GASGA+FGLLG++L + +++ + + LV++I IN G+
Sbjct: 228 S-IASYFFSTALSAGASGAIFGLLGALLYYSLKRPSLWKSGLGMNLVIVIIINFGFGLTQ 286
Query: 242 PHVDNFAHIGGFISGFL 258
P +DN+AH+GG I GFL
Sbjct: 287 PGIDNYAHLGGLIIGFL 303
>gi|324503187|gb|ADY41389.1| Rhomboid family member 1 [Ascaris suum]
Length = 952
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H +L LE+ G+ R+ ++Y+ +G GGSL SA+F+
Sbjct: 745 QFYRLFIPIFLHAGIIHCAITVLVQWYYMRDLEKLIGWARMAIVYMGAGIGGSLASAIFL 804
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ G+ +M +++I NW + L + + G+LP +DN+A
Sbjct: 805 PYRPEVGPAGSHIGIFAAMYTDIIYNWRLIQRPWSALRELAMFTLVLFICGLLPWIDNWA 864
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFLL F +++ S RK W + +V+ +
Sbjct: 865 HLFGFIFGFLLSLA-----TFPYIQ--------SHNHDRK--------WRLMIVIACLMT 903
Query: 309 TLGLVMLLRGV---DANDHCSWCHYLSCVPTSRWSCRTE 344
GL MLL V A+ C +C Y +C+P + C +
Sbjct: 904 AFGLFMLLLAVFYLRADFDCPFCEYFNCLPFTDHLCDNQ 942
>gi|297205734|ref|ZP_06923129.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
gi|297148860|gb|EFH29158.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
Length = 229
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 78 YVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLIT 137
Y N N++ V + F+ + F S L K+GA V+ Q WRL T
Sbjct: 10 YKTNAMTNTIFVV--LVAMFALETFNGGS---EDSAVLFKLGAQFNPAVIILGQWWRLFT 64
Query: 138 CNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISV 196
+LH G+ H++ N ++L +G LE G +R ++Y+++G GG+L++ F N +S
Sbjct: 65 AQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVRFLIIYLLAGVGGNLMTLAFGSDNAVSA 124
Query: 197 GASGALFGLLGSMLSELITNWT----IYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
GAS ALFGL G+M++ I N T Y + L V INL I +P +D + H+G
Sbjct: 125 GASTALFGLFGAMIALGIANRTHEGMAYLGRQSFVLAV---INLLFDINVPQIDTWGHVG 181
Query: 252 GFISGFLL 259
G I+GFLL
Sbjct: 182 GLIAGFLL 189
>gi|403331813|gb|EJY64875.1| hypothetical protein OXYTRI_14975 [Oxytricha trifallax]
Length = 319
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 73/117 (62%)
Query: 101 PFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
P + LGPS +TL + G+ + ++ Q WR T +LH G HI +NMLS ++IG
Sbjct: 100 PLDNDNFLGPSVITLNQFGSNNPFRMRYDIQLWRFFTPIFLHAGFMHIFSNMLSQMIIGF 159
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
LE G RVGLLY++SG GG+L SAL +SVGAS ++FGLL +LS ++ NW
Sbjct: 160 MLESIMGPFRVGLLYLVSGIGGNLFSALCAPDKLSVGASTSIFGLLACLLSLVLVNW 216
>gi|350636534|gb|EHA24894.1| hypothetical protein ASPNIDRAFT_129525 [Aspergillus niger ATCC
1015]
Length = 891
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 55/267 (20%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD + +Q +R I ++H G HI N++ + +G+ +E+ G+ R ++Y+ S
Sbjct: 153 GSLDDKP--EPNQWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVAS 210
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W + + +++ IA++
Sbjct: 211 GIWGFVLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVS 270
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSG--------- 280
+G+LP +DNFAHIGGFI G LG L +R + G Y A+SG
Sbjct: 271 FVLGLLPGLDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPDD 330
Query: 281 --------------------------YSALSRRKFMTYQCILWIV-------SLVLVIVG 307
+ L+ F + LW +LV V+VG
Sbjct: 331 NQKVNTGPSLVDFLKGRRTRTGAGASNNKLNPVNFFRGRKPLWWAWWLVRAGALVAVLVG 390
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSCV 334
L +V + +N CSWC+ LSC+
Sbjct: 391 FILLIVDFYKYPKSN--CSWCYRLSCL 415
>gi|299755411|ref|XP_001828645.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
gi|298411214|gb|EAU93149.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
Length = 502
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R IT +LH G+ H+L NML+ + ++E++ G ++Y +G G++L
Sbjct: 279 EPNQWFRFITAIFLHAGIIHLLLNMLAQFTLSAQIERDMGSTGFLIVYFAAGIFGNVLGG 338
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTI-YTNKHFLTLVVI---IAINLAVGILP 242
F I SVGASGA+FG L +L+ +W Y + LV + +AI +A+G +P
Sbjct: 339 NFSLVGIPSVGASGAIFGTLAVTWVDLLAHWKYQYRPVRKVGLVFMTIELAIGVAIGFIP 398
Query: 243 HVDNFAHIGGFISGFLLGFVF 263
+VDNFAH+GGF+ G L+G +F
Sbjct: 399 YVDNFAHLGGFLMGLLVGTIF 419
>gi|431793836|ref|YP_007220741.1| hypothetical protein Desdi_1896 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784062|gb|AGA69345.1| putative membrane protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
M V+ ++ + + WRL T +LH GV H+ N+ +L +G LE+ FG IR L+YI
Sbjct: 173 MFGAKVNSLILQGEYWRLFTSMFLHIGVIHLAFNLYALWALGPILEELFGRIRYLLIYIS 232
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLA 237
SG GS S LF + IS GASGA+FG+LG+++ + ++ + LV+I+ INL+
Sbjct: 233 SGVMGSAASFLFTDA-ISAGASGAIFGILGALVVYSRSKPFLWKSGFGKNLVIIVLINLS 291
Query: 238 VGIL-PHVDNFAHIGGFISGFLLG 260
+G P +D +AHIGG +SG LL
Sbjct: 292 IGFFQPGIDVYAHIGGLLSGMLLA 315
>gi|339235851|ref|XP_003379480.1| peptidase, S54 family [Trichinella spiralis]
gi|316977860|gb|EFV60908.1| peptidase, S54 family [Trichinella spiralis]
Length = 966
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
RLI +LH G+ H ++ + LE+ G+ RV ++Y+ISG GG L SA+F+
Sbjct: 546 RLIIPLFLHAGIIHCFITVVIQYFLLRDLEKLVGWSRVAVIYMISGVGGYLGSAVFVPYQ 605
Query: 194 ISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIG 251
VG +G+ FGLL ++ +++ +W + K L+ I +G+LP +DN+AH
Sbjct: 606 AEVGPAGSQFGLLAGLVVDVVYSWEMIARPWKALGQLLAFIVFLFILGLLPWIDNYAHAF 665
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
GF+ G LL QF RRK I+ + S + + +GL LG
Sbjct: 666 GFVFGLLLSLALFPYIQF------------DENGRRKR-----IIIVASSLTICIGL-LG 707
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
++++L V+ C C Y +C+P + C
Sbjct: 708 VLVILFYVNPLWSCDNCVYFNCIPFTDHLC 737
>gi|402298353|ref|ZP_10818053.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
gi|401726454|gb|EJS99682.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
Length = 519
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S +TL ++GA S ++ + WR+IT ++H G H+L N L+L +G +E+ +G R
Sbjct: 214 SILTLVEVGA-KYSPLILDGEWWRIITSMFIHIGFLHLLMNSLALYFLGTLVERIYGSFR 272
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y +G G+L+S ++ +I GASGA+FGL G++L + ++ +++
Sbjct: 273 FVFIYFTAGVIGTLVS-FWMNLSIGAGASGAIFGLFGALLYFGLNYRKLFFRTMGANVLI 331
Query: 231 IIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
++AINLA G L P VDN AH+GG I GFL +V + Q V+Q A+ +S F
Sbjct: 332 VLAINLAFGFLIPVVDNSAHVGGLIGGFLAAYVIQLPKQKKSVKQLIAVVSLFIMSLVPF 391
Query: 290 MTYQCIL 296
+ +L
Sbjct: 392 LFADALL 398
>gi|268319881|ref|YP_003293537.1| hypothetical protein FI9785_1410 [Lactobacillus johnsonii FI9785]
gi|262398256|emb|CAX67270.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 228
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ L ++GA++ V HQ WRL T +LH G HI +N + +
Sbjct: 23 FVVFIIETMMGGSTNINILVRLGAMNNQLVTVGHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS ++ S +S GAS ALFGL G +++ +
Sbjct: 83 YMGQFMEPLLGHWRFLTVYLLSGIGGNLLSYAYVSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y + L L + INLA+ + H+D H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGRQALALAI---INLALDLFASHIDILGHLGGLISGFLLGIIF 192
>gi|340724954|ref|XP_003400842.1| PREDICTED: hypothetical protein LOC100644578 [Bombus terrestris]
Length = 1834
Score = 92.4 bits (228), Expect = 4e-16, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH GV H+ ++ + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 1627 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 1686
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L+ ++ L +G+LP VDN+A
Sbjct: 1687 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYA 1746
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + + FG ++R R+ ++ + C L+L++V
Sbjct: 1747 HLFGFIFGFLAAYALMPFISFGHYDRR----------RKIWLIWIC------LILIVVLF 1790
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
TL L+ L V + C C +C+P +R C ++
Sbjct: 1791 TL-LLALFYNVPVYE-CEVCKLFNCIPFTRDFCASQ 1824
>gi|361127409|gb|EHK99378.1| putative Inactive rhomboid protein 1 [Glarea lozoyensis 74030]
Length = 302
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQG---WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
++ ++ +GA + + DKHQ +R I +LH G+ HI NML + +G +E G
Sbjct: 80 ANSSIPGIGAPSGTALEDKHQPDQWFRFIVPIFLHAGIIHIGFNMLLQMTLGREMEMIIG 139
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWT--IYTNKH 224
IR L+YI SG G +L F I S GASG+LFG+L L +L+ +W I K
Sbjct: 140 SIRYFLVYIASGIFGFVLGGNFAAEGIASTGASGSLFGILALTLLDLLYHWAERISPWKD 199
Query: 225 FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRP 267
F +++ IAI+ +G+LP +DNF+HIGGFI G LG L P
Sbjct: 200 FAFIMLDIAISFVLGLLPGLDNFSHIGGFIMGIALGICILHSP 242
>gi|326428155|gb|EGD73725.1| hypothetical protein PTSG_05431 [Salpingoeca sp. ATCC 50818]
Length = 745
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R T ++H G+ HI +E++ GF+R+ L+Y I+ GG+L+S
Sbjct: 542 EPNQWYRFFTSIFVHAGIIHIFIVATFQWTAAAAVERKCGFLRMLLMYTIACVGGNLVSG 601
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVD 245
+F VGA+G +FG+LG + +L +W + L+L++ IA+ +G LP +D
Sbjct: 602 IFSPLYPQVGAAGGVFGVLGISIVDLFHSWPVIERPMSKLLSLLIEIAVLFFIGTLPWID 661
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVI 305
NFAHIGGF+ G + VFL FG + + +L V + L+I
Sbjct: 662 NFAHIGGFVFGAVSAVVFLPYVTFGKFD----------------AVKKGVLLCVCIPLLI 705
Query: 306 VGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
+ L++ + ++ C C + C+
Sbjct: 706 ALFAVALILFYE-IQDSEFCPGCDAIQCI 733
>gi|312077777|ref|XP_003141452.1| rhomboid family protein [Loa loa]
Length = 989
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 102 FKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
F EN L L ++ G L + Q +RL +LH G+ H + + ++
Sbjct: 752 FHENATLCSQVSCLSEICGMLPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMR 811
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
LE+ G+ RV LLY++ G GG L A+F+ VG +G+ G+ +M +++ +W +
Sbjct: 812 DLEKLLGWARVALLYMVPGIGGYLAGAIFVPYKPEVGPAGSHVGMFAAMYVDVVYSWNLL 871
Query: 221 TN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
+ L + AVG LP VDN+AH GFI G L+ L Y
Sbjct: 872 ERPWHAIMQLSLFTVAVFAVGTLPWVDNWAHFFGFIFGILVSLAVLP----------YIQ 921
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
+ + +RR ++ +++ + ++ GL + L+ + A + C++C Y +C+P +
Sbjct: 922 TKHHNRARR-------LIIVITSLSIVFGLFVVLLTMFYWPSAFN-CTYCEYFNCIPYTD 973
Query: 339 WSCRTE 344
C +
Sbjct: 974 HFCDNQ 979
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA + + + Q +R +T +LHG + H+ N +L +G E+ FG R LY+I+
Sbjct: 86 GAKENAAISIGGQYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYLIA 145
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY---TNKHFLTLVVIIAIN 235
G GG ++S F N SVGASGA+FGL+G++++ + ++ + +L+ ++ IN
Sbjct: 146 GLGGGVMSYAF-NPNPSVGASGAIFGLIGALIAFYVVARSVLGGIARQQLGSLIFVVMIN 204
Query: 236 LAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
LA+G P++DN AHIGG ++G ++G +L+ P+F + Y
Sbjct: 205 LALGFTSPYIDNNAHIGGLLTGAVIG--WLLAPRFALDPRSY 244
>gi|242817342|ref|XP_002486936.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
gi|218713401|gb|EED12825.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
Length = 526
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 51/259 (19%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R I +LH G+ HI NML + +G +E+ G+ R L+Y SG G ++
Sbjct: 257 EPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSSGIFGFVMGG 316
Query: 188 LFIQSNIS-VGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHV 244
+ IS GASGALFGL+ L +L+ W + + L++ IA++ +G+LP +
Sbjct: 317 NYAAQGISSTGASGALFGLVALTLLDLLYTWGERRSPWVELIFLIIEIAVSFVLGLLPGL 376
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS--GYSALS----------------- 285
DNF+HIGGFI G +G + P + + +R L Y +S
Sbjct: 377 DNFSHIGGFIMGLAMGLCMMRSPNY--IRERIGLQRRPYVVMSGGAGPTPGDGDNNSNTI 434
Query: 286 ----------RRKFMTYQCI------------LWIV---SLVLVIVGLTLGLVMLLRGVD 320
R T + + W+V +LV VI+G + +
Sbjct: 435 NSNNIDNNKPSRSVATGRLVGFFRGRKPLWWAWWLVRAGALVAVIIGFIFLVTDFYKYPK 494
Query: 321 ANDHCSWCHYLSCVPTSRW 339
+ CSWC+ LSC+P W
Sbjct: 495 ST--CSWCYRLSCLPIKNW 511
>gi|393912104|gb|EFO22618.2| rhomboid family protein [Loa loa]
Length = 1003
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 102 FKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
F EN L L ++ G L + Q +RL +LH G+ H + + ++
Sbjct: 766 FHENATLCSQVSCLSEICGMLPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMR 825
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
LE+ G+ RV LLY++ G GG L A+F+ VG +G+ G+ +M +++ +W +
Sbjct: 826 DLEKLLGWARVALLYMVPGIGGYLAGAIFVPYKPEVGPAGSHVGMFAAMYVDVVYSWNLL 885
Query: 221 TN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
+ L + AVG LP VDN+AH GFI G L+ L Y
Sbjct: 886 ERPWHAIMQLSLFTVAVFAVGTLPWVDNWAHFFGFIFGILVSLAVLP----------YIQ 935
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
+ + +RR ++ +++ + ++ GL + L+ + A + C++C Y +C+P +
Sbjct: 936 TKHHNRARR-------LIIVITSLSIVFGLFVVLLTMFYWPSAFN-CTYCEYFNCIPYTD 987
Query: 339 WSCRTE 344
C +
Sbjct: 988 HFCDNQ 993
>gi|56420981|ref|YP_148299.1| hypothetical protein GK2446 [Geobacillus kaustophilus HTA426]
gi|56380823|dbj|BAD76731.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 390
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ +++ + WRL+T +LH G H+L N L+L +GI +E+ +G +R +Y+ +GF G+
Sbjct: 220 NPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAGFFGA 279
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VVIIAINLAVG 239
L S LF S +S GASGA+FGL G++L T+Y + F T+ + +I +NL G
Sbjct: 280 LASFLFTPS-LSAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVISLIIVNLLFG 334
Query: 240 IL-PHVDNFAHIGGFISGFL 258
+L P +DN HIGG + GFL
Sbjct: 335 LLVPGIDNAGHIGGLVGGFL 354
>gi|261417690|ref|YP_003251372.1| rhomboid family protein [Geobacillus sp. Y412MC61]
gi|319767503|ref|YP_004133004.1| rhomboid family protein [Geobacillus sp. Y412MC52]
gi|261374147|gb|ACX76890.1| Rhomboid family protein [Geobacillus sp. Y412MC61]
gi|317112369|gb|ADU94861.1| Rhomboid family protein [Geobacillus sp. Y412MC52]
Length = 386
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ +++ + WRL+T +LH G H+L N L+L +GI +E+ +G +R +Y+ +GF G+
Sbjct: 216 NPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAGFFGA 275
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VVIIAINLAVG 239
L S LF S +S GASGA+FGL G++L T+Y + F T+ + +I +NL G
Sbjct: 276 LASFLFTPS-LSAGASGAIFGLFGALL----YFGTVYRHLFFRTMGMNVISLIIVNLLFG 330
Query: 240 IL-PHVDNFAHIGGFISGFL 258
+L P +DN HIGG + GFL
Sbjct: 331 LLVPGIDNAGHIGGLVGGFL 350
>gi|375009531|ref|YP_004983164.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288380|gb|AEV20064.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ +++ + WRL+T +LH G H+L N L+L +GI +E+ +G +R +Y+ +GF G+
Sbjct: 219 NPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAGFFGA 278
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VVIIAINLAVG 239
L S LF S +S GASGA+FGL G++L T+Y + F T+ + +I +NL G
Sbjct: 279 LASFLFTPS-LSAGASGAIFGLFGALL----YFGTVYRHLFFRTMGMNVISLIIVNLLFG 333
Query: 240 IL-PHVDNFAHIGGFISGFL 258
+L P +DN HIGG + GFL
Sbjct: 334 LLVPGIDNAGHIGGLVGGFL 353
>gi|297529385|ref|YP_003670660.1| rhomboid family protein [Geobacillus sp. C56-T3]
gi|297252637|gb|ADI26083.1| Rhomboid family protein [Geobacillus sp. C56-T3]
Length = 386
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ +++ + WRL+T +LH G H+L N L+L +GI +E+ +G +R +Y+ +GF G+
Sbjct: 216 NPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAGFFGA 275
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VVIIAINLAVG 239
L S LF S +S GASGA+FGL G++L T+Y + F T+ + +I +NL G
Sbjct: 276 LASFLFTPS-LSAGASGAIFGLFGALL----YFGTVYRHLFFRTMGMNVISLIIVNLLFG 330
Query: 240 IL-PHVDNFAHIGGFISGFL 258
+L P +DN HIGG + GFL
Sbjct: 331 LLVPGIDNAGHIGGLVGGFL 350
>gi|350416907|ref|XP_003491162.1| PREDICTED: inactive rhomboid protein 1-like, partial [Bombus
impatiens]
Length = 888
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH GV H+ ++ + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 681 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 740
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L+ ++ L +G+LP VDN+A
Sbjct: 741 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYA 800
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + + FG ++R + ++WI L+L++V
Sbjct: 801 HLFGFIFGFLAAYALMPFISFGHYDRRRKI---------------WLIWIC-LILIVVLF 844
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
TL L+ L V + C C +C+P +R C ++
Sbjct: 845 TL-LLALFYNVPVYE-CEVCKLFNCIPFTRDFCASQ 878
>gi|433462194|ref|ZP_20419783.1| S54 family peptidase [Halobacillus sp. BAB-2008]
gi|432189083|gb|ELK46216.1| S54 family peptidase [Halobacillus sp. BAB-2008]
Length = 510
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRL+T +LH G+ H++ NML+L IG +E+ +G R ++Y+++G GS+ S +
Sbjct: 227 WRLVTSMFLHIGLIHLMMNMLALYYIGTAVERIYGSWRYIIIYLLAGVFGSVAS-FMLNP 285
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
+S GASGA+FGL G++L + N ++ L+ II +N+A G+ +P +DN AH+G
Sbjct: 286 QVSAGASGAIFGLFGALLYFGVWNRRLFFQTMGWNLLFIIGLNIAFGLFVPQIDNGAHMG 345
Query: 252 GFISGFL 258
G I GF+
Sbjct: 346 GLIGGFI 352
>gi|330997596|ref|ZP_08321442.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
gi|329570307|gb|EGG52042.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
Length = 478
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 99/165 (60%), Gaps = 14/165 (8%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L P +++L GA + + WR+ TCN++H G+ H++ N+ +LL +G+ LE
Sbjct: 82 VLEPDNISLLHWGA-NFGPLTLTGDYWRVWTCNFVHSGLIHLIMNVYALLFVGLFLEPML 140
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNKHF 225
G +RV ++Y ++G S+ + LF ++ ISVGASGA+FGL G++ + L+ Y +
Sbjct: 141 GSLRVVMVYSLAGLYSSV-AGLFCHADWISVGASGAIFGLYGALFARLL----FYKGQSS 195
Query: 226 LTLVVIIAI------NLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
+++IAI NL GI +VDN AH GG ++GFLLG V+
Sbjct: 196 WRKILLIAIGGFILYNLLYGIGDNNVDNAAHTGGLVAGFLLGVVY 240
>gi|167387754|ref|XP_001738294.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898583|gb|EDR25416.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 334
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 5/181 (2%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+ N +LGP+S + +GA + ++ +Q WRLIT +LHGG+ H++ N+ L +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLICNLTMQLRL 177
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G+ +E+ + R ++Y +SG G+ S + ++I VGASG+L G+ G + ++I N
Sbjct: 178 GMIIERRWNSFRFLVVYFVSGIIGNCFSIICQPTSIGVGASGSLLGIFGGFVIDIIINKN 237
Query: 219 IYTNKHFLTLV----VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+ N+ +L L+ + I I P +D AHI GFI G + F L Q W+ +
Sbjct: 238 KFENRVWLNLIGRLMISIIIIFVFSFAPGIDYSAHIFGFIGGAICAFGLLAH-QNPWITK 296
Query: 275 R 275
R
Sbjct: 297 R 297
>gi|302697719|ref|XP_003038538.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
gi|300112235|gb|EFJ03636.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
Length = 368
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 66/285 (23%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGAL--DVSKVVDK-------------------------- 129
SF+P NP+LGPSS L +GA K+VD
Sbjct: 68 SFKP-TVNPMLGPSSSALINVGARFPPCMKLVDDIPPSFELPCMNTTDLNDATYCTIEEL 126
Query: 130 -----------HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
+Q +R IT +LH G+ H++ NM + + + ++E+E G L Y +
Sbjct: 127 CGFGGFHDKEPNQWFRFITPIFLHAGIVHLILNMFAQVTVSAQIEREMGSGGFFLTYFAA 186
Query: 179 GFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAIN 235
G G++L F I SVGASGA+FG + +L +W + + +++ +AI
Sbjct: 187 GIFGNILGGNFALVGIPSVGASGAIFGTIAVTWVDLFAHWKYQYRPVRKLIFMIIELAIG 246
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
+A+G +P+VDNFAH+GGF+ G L+G +F Y +S K ++ I
Sbjct: 247 IAIGFIPYVDNFAHLGGFLLGLLVGTIF-----------------YPVISETK--RHKFI 287
Query: 296 LWIVSLVLVIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
+WI L + + + L V+L R +D C C YLSC PT
Sbjct: 288 MWIFRLAAIPLAIVL-FVVLTRNFYTSDPYASCPGCRYLSCWPTD 331
>gi|150019138|ref|YP_001311392.1| rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
gi|149905603|gb|ABR36436.1| Rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
Length = 328
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V++++++ Q WRL+TC +LHGG+ HI+ NM SL ++G ++Q +G + ++YI S
Sbjct: 180 VNELINQGQYWRLLTCAFLHGGLIHIVGNMYSLYILGPEIQQIYGVYKYFIIYIFSCLTS 239
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-L 241
SLLS F+ +SVGASG +FGL+G+++ I ++ +L+ + +NL +G +
Sbjct: 240 SLLSY-FMSPYLSVGASGGIFGLMGALVVFAIIERKRINKRYLSSLLQAMGVNLFIGFSI 298
Query: 242 PHVDNFAH 249
++DNFAH
Sbjct: 299 SNIDNFAH 306
>gi|138896022|ref|YP_001126475.1| hypothetical protein GTNG_2385 [Geobacillus thermodenitrificans
NG80-2]
gi|134267535|gb|ABO67730.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 386
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 11/149 (7%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA + +++ + WR +T +LH G H+L N +L +GI +E+ +G +R L+
Sbjct: 208 LIRYGA-KFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLI 266
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VV 230
Y +GF G+L S LF S IS GASGA+FGL G++L T+Y + F T+ V
Sbjct: 267 YTTAGFFGTLASFLFTPS-ISAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVVS 321
Query: 231 IIAINLAVGIL-PHVDNFAHIGGFISGFL 258
+I +NL G+L P +DN HIGG + GFL
Sbjct: 322 LIVVNLLFGLLVPGIDNAGHIGGLVGGFL 350
>gi|326202014|ref|ZP_08191884.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
gi|325987809|gb|EGD48635.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
Length = 519
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L+ GA V+ ++ + Q WR T +LH + H+ N S+ +IG ++E+ FG R +
Sbjct: 214 LEPFGA-KVNNLIMEGQYWRFFTPMFLHADIVHLAVNCYSIYIIGAQVEKIFGRGRFLAI 272
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
Y ++G GS S F N SVGASGA+FGL+G+ML + + + + + L+ +I I
Sbjct: 273 YFVAGLIGSAASFAF-SLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMIVI 331
Query: 235 NLAVGIL-PHVDNFAHIGGFISGFL 258
NLA G++ +DN AHIGG + GFL
Sbjct: 332 NLAYGVMNKRIDNHAHIGGLVGGFL 356
>gi|402221037|gb|EJU01107.1| rhomboid-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 151/340 (44%), Gaps = 83/340 (24%)
Query: 50 EIKHSKKWVT---W--LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGR-FSFQPFK 103
I++ ++ VT W ++P VA I++F+ + +N A F G SF P
Sbjct: 13 RIENRRRGVTRQRWSIVVPILTVAMISVFIYELVLN----------AHFQGTPVSFHP-T 61
Query: 104 ENPLLGPSSVTLQKMGAL---------------------DVSKVVDK------------- 129
N +LGP TL +GA D + D+
Sbjct: 62 VNYMLGPGGSTLINVGARFVPCMKLVPEVPPTTQLACMNDTANPADQICPLSTVCGFGGF 121
Query: 130 ------HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+Q +R I +LH G+ HIL NML+ + +E++ G ++Y +G G+
Sbjct: 122 PADGVPNQWFRFILPIFLHVGIIHILLNMLAQATLCTLVERQVGSTAFIIIYFAAGIFGN 181
Query: 184 LLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGI 240
+L F I S+GASGA+FG + + +L+T+W + + + L++ I +G
Sbjct: 182 VLGGNFALLGITSMGASGAIFGCVAAQWVDLLTHWNLEDRPGRSLIFLIIEFIIGFGLGY 241
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVS 300
+P VDNFAH+GGF+ G L V + +S + T+ ++W+
Sbjct: 242 IPGVDNFAHLGGFLMGLLTCIVL-----------------FPVISVTR--THMIVVWVCR 282
Query: 301 LVLVIVGLTLGLVMLLRGVDANDH---CSWCHYLSCVPTS 337
++ + + + L V+L+R D C WC YLSC+PTS
Sbjct: 283 ILAIPLIIVL-FVVLIRNFYTTDPAAGCEWCRYLSCIPTS 321
>gi|166033079|ref|ZP_02235908.1| hypothetical protein DORFOR_02801 [Dorea formicigenerans ATCC
27755]
gi|166027436|gb|EDR46193.1| peptidase, S54 family [Dorea formicigenerans ATCC 27755]
Length = 199
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 86 SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGV 145
+ + V FLG SF E+ S + + GA+ V +++ + + LIT +LH G
Sbjct: 15 AAANVLIFLG-LSFMGMTED------SAFMMEHGAMYVPYLMNGERYYTLITSMFLHFGF 67
Query: 146 FHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN----ISVGASGA 201
H++ NM+ LLVIG LE E G IR L+Y+ SG G+L+SA F S +S GASGA
Sbjct: 68 SHLMNNMVMLLVIGYSLEPEIGKIRFLLIYLGSGLMGNLVSAWFDVSQGSYAVSAGASGA 127
Query: 202 LFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLL 259
+FG++G++L I N LV++ ++L G VDN AHIGG +SGFLL
Sbjct: 128 IFGIVGALLYVAIRNHGRVGEISTRGLVLMAGLSLYYGFTAQGVDNAAHIGGLVSGFLL 186
>gi|227889556|ref|ZP_04007361.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
gi|227849858|gb|EEJ59944.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
Length = 228
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ L ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FIVFIIETMMGGSTNINILVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YMGQFMEPLLGHWRFLTVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVF 263
N I Y K LTL + INLA+ + + H++ H+GG ISGFLLG +F
Sbjct: 143 NRAIPAINYLGKQALTLAI---INLALDLFVSHINILGHLGGLISGFLLGIIF 192
>gi|297584599|ref|YP_003700379.1| rhomboid protease [Bacillus selenitireducens MLS10]
gi|297143056|gb|ADH99813.1| Rhomboid protease [Bacillus selenitireducens MLS10]
Length = 526
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S++TL + GA ++D + WR ++ ++H G H+ N L+L +G +E+ FG R
Sbjct: 215 STLTLVEFGAKYDPAILDG-EWWRFVSAMFIHIGPLHLFMNSLALFFLGAAVERIFGTGR 273
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y ++G GS+ S +F NIS GASGA+FGL G++L + + ++ + ++V
Sbjct: 274 FFGIYFLAGLFGSVASFVF-NDNISAGASGAIFGLFGALLYFGVRHKKLFFRTMGMNILV 332
Query: 231 IIAINLAVG-ILPHVDNFAHIGGFISGFL 258
I+ INL G ++P VDN AHIGG I GF+
Sbjct: 333 ILGINLVFGFVVPMVDNGAHIGGLIGGFI 361
>gi|448238728|ref|YP_007402786.1| rhomboid family protein [Geobacillus sp. GHH01]
gi|445207570|gb|AGE23035.1| rhomboid family protein [Geobacillus sp. GHH01]
Length = 389
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 10/140 (7%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
+ +++ + WRL+T +LH G H+L N L+L +GI +E+ +G R +Y+ +GF G+
Sbjct: 219 NPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSFRFLFIYVTAGFFGA 278
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VVIIAINLAVG 239
L S LF S +S GASGA+FGL G++L T+Y + F T+ + +I +NL G
Sbjct: 279 LASFLFTPS-LSAGASGAIFGLFGALL----YFGTVYRHLFFRTMGMNVISLIIVNLLFG 333
Query: 240 IL-PHVDNFAHIGGFISGFL 258
+L P +DN HIGG + GFL
Sbjct: 334 LLVPGIDNAGHIGGLVGGFL 353
>gi|325264281|ref|ZP_08131012.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
gi|324030352|gb|EGB91636.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
Length = 223
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 11/167 (6%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ + + GA+ VV+ HQ +R+ T +LH G+ H+L NM+ L +G LE E G I
Sbjct: 53 EDSLFMLEHGAMYEPYVVEGHQYYRMFTSLFLHFGIEHLLNNMVLLGALGWNLELETGRI 112
Query: 170 RVGLLYIISGFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNW---TIYTN 222
+ ++Y ISG GG++LS S +S GASGA+FGL+G++L ++ N TN
Sbjct: 113 KFLIIYFISGLGGNMLSLWMNMSTDKMVVSAGASGAIFGLMGALLCVVLKNHGRVGRLTN 172
Query: 223 KHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+ L +VV ++L G VDN AHIGG + GF++ V RP+
Sbjct: 173 RGLLFMVV---LSLYFGFTSSGVDNAAHIGGLVCGFVMAAVLYRRPK 216
>gi|238853801|ref|ZP_04644167.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
gi|238833610|gb|EEQ25881.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
Length = 228
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 99 FQPFKENPLLGPSSV--TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F ++G S+ TL ++GA++ V +HQ WRL T +LH G HI +N + +
Sbjct: 23 FIVFILETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIY 82
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELIT 215
+G +E G R +Y++SG GG+LLS + S +S GAS ALFGL G +++ +
Sbjct: 83 YVGQFMEPLLGHWRFLSVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLA 142
Query: 216 NWTI----YTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N I Y K L L + INLA+ + H+D H+G ISGFLLG +F
Sbjct: 143 NRAIPAINYLGKQALALAI---INLALDLFASHIDILGHLGDLISGFLLGIIF 192
>gi|58337771|ref|YP_194356.1| hypothetical protein LBA1506 [Lactobacillus acidophilus NCFM]
gi|58255088|gb|AAV43325.1| putative membrane protein [Lactobacillus acidophilus NCFM]
Length = 226
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL T +LH GV H+++N + + +G +E G R +
Sbjct: 38 VLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFLV 97
Query: 174 LYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNW----TIYTNKHFLTL 228
Y+++G GG+L+S F +S GAS ALFGL G+M + + N+ Y + L L
Sbjct: 98 TYLLAGIGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNFRNPMISYLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLIAGFLLAII 189
>gi|309805213|ref|ZP_07699265.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
gi|308165447|gb|EFO67678.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
Length = 232
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|347826752|emb|CCD42449.1| similar to rhomboid family membrane protein [Botryotinia
fuckeliana]
Length = 547
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R I +LH G+ HI NML + +G +E G IR L+YI SG G +L F
Sbjct: 287 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 346
Query: 191 QSNIS-VGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ IS GASGALFGL+ L +L+ W + K +++ I I+ +G+LP +DNF
Sbjct: 347 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIVISFVLGLLPGLDNF 406
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+HIGGF+ G +LG L P + + Y+ + + Q IVSL G
Sbjct: 407 SHIGGFLMGLVLGLSILRSPNSLRMRTGQSDPPYAPVPTK---ASQGDRGIVSLFKNPSG 463
Query: 308 LTLG----------------------LVMLLRGVDA-NDHCSWCHYLSCVPTSRW 339
G ++LL C WC YLSC+ + W
Sbjct: 464 FFKGRKPAWWAWLLLRLAALVFVFIVFILLLNNFYVYRKTCGWCKYLSCINVNNW 518
>gi|315653611|ref|ZP_07906531.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
gi|315488973|gb|EFU78615.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
Length = 232
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|325912121|ref|ZP_08174519.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
gi|325476071|gb|EGC79239.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
Length = 232
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|196248915|ref|ZP_03147615.1| Rhomboid family protein [Geobacillus sp. G11MC16]
gi|196211791|gb|EDY06550.1| Rhomboid family protein [Geobacillus sp. G11MC16]
Length = 390
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 11/149 (7%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA + +++ + WR +T +LH G H+L N +L +GI +E+ +G +R L+
Sbjct: 212 LIRYGA-KFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLI 270
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL----VV 230
Y +GF G+L S LF S IS GASGA+FGL G++L T+Y + F T+ +
Sbjct: 271 YATAGFFGTLASFLFTPS-ISAGASGAIFGLFGALLY----FGTVYRHLFFRTMGMNVIS 325
Query: 231 IIAINLAVGIL-PHVDNFAHIGGFISGFL 258
+I +NL G+L P +DN HIGG + GFL
Sbjct: 326 LIVVNLLFGLLVPGIDNAGHIGGLVGGFL 354
>gi|154305263|ref|XP_001553034.1| hypothetical protein BC1G_08926 [Botryotinia fuckeliana B05.10]
Length = 547
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R I +LH G+ HI NML + +G +E G IR L+YI SG G +L F
Sbjct: 287 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 346
Query: 191 QSNIS-VGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ IS GASGALFGL+ L +L+ W + K +++ I I+ +G+LP +DNF
Sbjct: 347 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIVISFVLGLLPGLDNF 406
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+HIGGF+ G +LG L P + + Y+ + + Q IVSL G
Sbjct: 407 SHIGGFLMGLVLGLSILRSPNSLRMRTGQSDPPYAPVPTK---ASQGDRGIVSLFKNPSG 463
Query: 308 LTLG----------------------LVMLLRGVDA-NDHCSWCHYLSCVPTSRW 339
G ++LL C WC YLSC+ + W
Sbjct: 464 FFKGRKPAWWAWLLLRLAALVFVFIVFILLLNNFYVYRKTCGWCKYLSCINVNNW 518
>gi|312872929|ref|ZP_07732989.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
gi|311091451|gb|EFQ49835.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
Length = 232
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|94968908|ref|YP_590956.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94550958|gb|ABF40882.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 365
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR++T +LHGG+ HIL NM +L +G E +G ++Y++SGFGGS + L+
Sbjct: 107 WRMLTSMFLHGGILHILVNMFALRNLGYTAELFYGRKNFLIIYMLSGFGGSAATLLWRPD 166
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFL-----TLVVIIAINLAVG-ILPHVDN 246
++SVGASGA+FG+ G+ L+ ++ + ++ L ++ +I NL +G LP ++N
Sbjct: 167 SVSVGASGAIFGVAGA-LAAMVYFKKLPVDRALLKRDIGSIGAVIFYNLLIGAALPIINN 225
Query: 247 FAHIGGFISGFLLGFVF 263
AH+GG ++G +LGF
Sbjct: 226 AAHVGGLVAGAILGFTL 242
>gi|255526224|ref|ZP_05393142.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296185575|ref|ZP_06853984.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
gi|255510064|gb|EET86386.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296049703|gb|EFG89128.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
Length = 323
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 29/207 (14%)
Query: 52 KHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPS 111
+ K V+ + + N+ +++T Y++ +S V FLG
Sbjct: 131 NYEKTEVSIITYILITVNVLAYIVTAYLSGNFVDSNINVLVFLGA--------------- 175
Query: 112 SVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRV 171
V+ ++ + + +RLITC +LHGG+ H+L NM +L +G +E+ +G R
Sbjct: 176 ----------KVNYLIARGEYYRLITCMFLHGGIMHLLLNMFALYSLGPFIEKIYGKTRY 225
Query: 172 GLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVV 230
++Y +SG S+ S +F + +S+GASGA+FGLLG+ L + F+T +V
Sbjct: 226 LIIYFLSGIVSSIFSYMF-STAVSIGASGAIFGLLGAALI-FAMKMKDRIGRGFITNIVS 283
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISG 256
+I INL +G + +VDNF H+GG I G
Sbjct: 284 VIFINLFMGFSMSNVDNFGHLGGLIGG 310
>gi|183230651|ref|XP_651687.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802835|gb|EAL46300.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
Length = 304
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+ N +LGP+S + +GA + ++ +Q WRLIT +LHGG+ H+L N+ L +
Sbjct: 88 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 147
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G+ +E+ + R ++Y +SG G+ S + ++I VGASG+L G+ G + ++I N
Sbjct: 148 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTSIGVGASGSLLGIFGGFVVDIIINKK 207
Query: 219 IYTNKHFLTLV----VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+ N+ +L+L+ + I I P +D AH+ GFI G + F L Q W+ +
Sbjct: 208 KFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFG-LFAHQNPWITK 266
Query: 275 R 275
+
Sbjct: 267 K 267
>gi|399889571|ref|ZP_10775448.1| hypothetical protein CarbS_13682 [Clostridium arbusti SL206]
Length = 323
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 97/157 (61%), Gaps = 16/157 (10%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L +GA D + +++ + +RL TC +LH G+ HI +NM SL IG +E FG + ++
Sbjct: 168 LDFLGAKD-NTLINSGEYYRLFTCMFLHSGIVHIASNMYSLYSIGGLVESIFGRKKYIIM 226
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH------FLTL 228
Y++SG SL S +F S ISVGASGA+FG+LG +L +I++ KH F +
Sbjct: 227 YLLSGLIASLFSYVF-SSGISVGASGAIFGVLGGVL--VISHKL----KHRIGKGLFRNI 279
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLG-FVF 263
+ +IAINL + +P++D AH+GG ISG ++ F+F
Sbjct: 280 IFVIAINLFISFTIPNIDISAHLGGLISGIIISWFIF 316
>gi|346306942|ref|ZP_08849090.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
gi|345907306|gb|EGX77017.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
Length = 199
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 12/179 (6%)
Query: 86 SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGV 145
+ + V FLG SF E+ S + + GA+ V +++ + + LIT +LH G
Sbjct: 15 AAANVLIFLG-LSFMGMTED------SAFMMEHGAMYVPYLMNGERYYTLITSMFLHFGF 67
Query: 146 FHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN----ISVGASGA 201
H++ NM+ LLVIG LE E G IR +Y+ SG G+L+SA F S +S GASGA
Sbjct: 68 SHLMNNMVMLLVIGYSLEPEIGKIRFLFIYLGSGLMGNLVSAWFDVSQGSYAVSAGASGA 127
Query: 202 LFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLL 259
+FG++G++L I N LV++ ++L G VDN AHIGG ISGFLL
Sbjct: 128 IFGIVGALLYVAIRNHGRVGEISTRGLVLMAGLSLYYGFTAQGVDNAAHIGGLISGFLL 186
>gi|449710524|gb|EMD49581.1| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
KU27]
Length = 334
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+ N +LGP+S + +GA + ++ +Q WRLIT +LHGG+ H+L N+ L +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 177
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G+ +E+ + R ++Y +SG G+ S + ++I VGASG+L G+ G + ++I N
Sbjct: 178 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTSIGVGASGSLLGIFGGFVVDIIINKK 237
Query: 219 IYTNKHFLTLV----VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+ N+ +L+L+ + I I P +D AH+ GFI G + F L Q W+ +
Sbjct: 238 KFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFG-LFAHQNPWITK 296
Query: 275 R 275
+
Sbjct: 297 K 297
>gi|312871798|ref|ZP_07731886.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
gi|312875588|ref|ZP_07735589.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311088842|gb|EFQ47285.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311092740|gb|EFQ51096.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
Length = 232
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|259500554|ref|ZP_05743456.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191244|ref|ZP_07267498.1| membrane-associated serine protease [Lactobacillus iners AB-1]
gi|259167938|gb|EEW52433.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
Length = 232
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|225572886|ref|ZP_03781641.1| hypothetical protein RUMHYD_01077 [Blautia hydrogenotrophica DSM
10507]
gi|225039751|gb|EEG49997.1| peptidase, S54 family [Blautia hydrogenotrophica DSM 10507]
Length = 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA + + +V+ + +RL T +LH G+ H+ NML L VIG LE+ G ++ L+Y+ S
Sbjct: 59 GAANAALIVEAKEYYRLFTSMFLHFGMAHLANNMLVLYVIGDNLERAVGKVKYLLIYLFS 118
Query: 179 GFGGSLLSA-LFIQS---NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G GG++LS L Q ++S GASGA+FG++G+ML L+ N + +V++
Sbjct: 119 GLGGNILSCYLEYQEGALSVSAGASGAIFGVMGAMLYVLLANHGRLEDLTARQIVIMAGF 178
Query: 235 NLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+L G VDN AH+GG I GFL+ + R +
Sbjct: 179 SLYFGFTSSGVDNAAHVGGLICGFLVAMLLYHRKR 213
>gi|325912656|ref|ZP_08175039.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
gi|325478077|gb|EGC81206.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
Length = 232
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|302837339|ref|XP_002950229.1| hypothetical protein VOLCADRAFT_90638 [Volvox carteri f.
nagariensis]
gi|300264702|gb|EFJ48897.1| hypothetical protein VOLCADRAFT_90638 [Volvox carteri f.
nagariensis]
Length = 386
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 145/348 (41%), Gaps = 49/348 (14%)
Query: 50 EIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLG 109
++ ++ TW+ V + F++ +YV ++NPLLG
Sbjct: 44 RLRRHQRVFTWMYNILAVGELVYFIVGLYV-------------------VADLQDNPLLG 84
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P + KMG +++++HQ WRLIT + + G H+ ANM + G L +E
Sbjct: 85 PGQDGILKMGGTYTQRIINRHQYWRLITSLFHNAGAIHLTANMGMVWTFGHFLVREISPW 144
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYT--NKHFLT 227
V ++Y+ +G G ++S + + GAS F L G+ + L+ W +T
Sbjct: 145 LVAMMYVTAGLSGLMVSVNVGAQHSTAGASIPSFALAGAATAMLLYRWRRFTCHGVSAAA 204
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISG--FLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+ I+A N +G P VDN + GF+ G +G + + G A++ Y+
Sbjct: 205 VAFIVAANAFIGATPFVDNSGNTAGFVFGGVICMGVMMKTDTKLG------AVAVYTIAV 258
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC---R 342
+ + ++V + GL LG + C+ C P+ W C R
Sbjct: 259 LAVAVL------LAAIVAGLAGLQLGTPI----------AGCCNAWVCTPSPWWDCNSSR 302
Query: 343 TEPAFCSTTQDGNQLNV-TCSSNGKSNLYILSNPSSSQIQSLCTELCS 389
P C+ T N ++ TC ++ + ++ + IQ +C LC+
Sbjct: 303 IWPRSCTLTSYSNTTSILTCPQGNTVDVSVDADAGADVIQIICDTLCA 350
>gi|419760008|ref|ZP_14286293.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
gi|407515047|gb|EKF49833.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
Length = 223
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 20/205 (9%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ L M +V Q +R++T ++HGG H++ NM +L +G +E +G
Sbjct: 28 PNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVYGTE 87
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--T 227
+ Y +SG G+L + +F ++ SVGASGA+FGL+G + + T Y+ K
Sbjct: 88 KFLTFYFLSGIVGNLATQIFYYNSFSVGASGAIFGLIGVLFAAGFRKDTPYSLKPITGSA 147
Query: 228 LVVIIAINLAVGILP--HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
L+ +I IN+ GI+P +++N AHIGGF++G LLG++ L YS
Sbjct: 148 LLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMI-------------PLYDYSWKV 194
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTL 310
R+ ++ I+WI+ L++V+ ++L
Sbjct: 195 RK---IWKVIMWILILLVVVSYISL 216
>gi|309810248|ref|ZP_07704093.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|312874222|ref|ZP_07734256.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
gi|308169520|gb|EFO71568.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|311090292|gb|EFQ48702.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
Length = 232
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L G ++ VV K Q WRL T ++H G FH++ N++ + G+ LEQ G IR +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHVICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 175 YIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTL 228
Y++SG GG+LLS Q N IS GAS A+FGL+GS+L+ N + FL L
Sbjct: 105 YLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLL 164
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ I ++ +P VD HIGG I+GFLL
Sbjct: 165 ICNIVVDF---FMPSVDIIGHIGGTITGFLL 192
>gi|159475008|ref|XP_001695615.1| rhomboid-like protein [Chlamydomonas reinhardtii]
gi|158275626|gb|EDP01402.1| rhomboid-like protein [Chlamydomonas reinhardtii]
Length = 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 155/373 (41%), Gaps = 58/373 (15%)
Query: 41 SAPP-----PAVYGE---------IKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNS 86
SAPP P +G ++ S+++ T V + F++ +Y
Sbjct: 3 SAPPSSTTSPYTFGRARASPRQARLRRSQRYWTAFYNVLTVGELVYFLVGLY-------- 54
Query: 87 VSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVF 146
+ ++ +NPLLGP +V + +G D ++VDK+Q WRLIT + + G
Sbjct: 55 -------MVQWQVADLADNPLLGPGNVGVINLGGTDTQRIVDKYQYWRLITTLFYNAGAI 107
Query: 147 HILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLL 206
H+ AN+ G L ++F V ++ +G G + SA N + GAS F L
Sbjct: 108 HLTANLGMTWTFGHFLVRQFSPFIVVFIWFAAGLAGVIFSANIGSENRTAGASAPAFALA 167
Query: 207 GSMLSELITNWTIYTNKHFLTLVV---IIAINLAVGILPHVDNFAHIGGFISG--FLLGF 261
G+ L+ W +T H + VV I+ +N +G P VDN + F+ G LGF
Sbjct: 168 GAATMMLVVRWRKFT-WHLASAVVVCFIVGVNTFIGATPFVDNSGNTAAFVFGGVLCLGF 226
Query: 262 VFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDA 321
+ + R Q + R+ + Y ++++VIV + GLV L
Sbjct: 227 MLIRRRQ-------------ADGKGRECLVYGNAA--AAVLVVIVAIIGGLVGLWLDTPI 271
Query: 322 NDHCSWCHYLSCVPTSRWSC---RTEPAFCSTTQDGNQLNVTCSSNGKSNL--YILSNPS 376
C+ C P+S W C R P C+ T N V G+S + ++ +
Sbjct: 272 GGC---CNVWVCTPSSWWDCEASRIWPTDCTYTSYLNGTAVLTCPRGQSIVIGFVNGTAA 328
Query: 377 SSQIQSLCTELCS 389
Q++ C+ C
Sbjct: 329 VDQVEQWCSSYCD 341
>gi|217077443|ref|YP_002335161.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
gi|217037298|gb|ACJ75820.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
Length = 223
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 20/205 (9%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ L M +V Q +R++T ++HGG H++ NM +L +G +E +G
Sbjct: 28 PNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVYGTE 87
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--T 227
+ Y +SG G+L + +F ++ SVGASGA+FGL+G + + T Y+ K
Sbjct: 88 KFLTFYFLSGIVGNLATQIFYYNSFSVGASGAIFGLIGVLFAAGFRKDTPYSLKPITGSA 147
Query: 228 LVVIIAINLAVGILP--HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
L+ +I IN+ GI+P +++N AHIGGF++G LLG++ L YS
Sbjct: 148 LLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMI-------------PLYDYSWKV 194
Query: 286 RRKFMTYQCILWIVSLVLVIVGLTL 310
R+ ++ I+WI+ L++V+ ++L
Sbjct: 195 RK---IWKVIMWILILLVVVSYISL 216
>gi|392426192|ref|YP_006467186.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
gi|391356155|gb|AFM41854.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
Length = 322
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 30 PVEEMDRP----QGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKN 85
P ++ D P Q S P ++ E++ K+ + + F+ N+ +F++
Sbjct: 99 PTKKQDIPRMLKQIASGTPVSLNAELQPQKQPIPYFTYAFIGINLLVFLLMTLAGGSENQ 158
Query: 86 SVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGV 145
V L GA V+ ++ Q WRL+T ++H G
Sbjct: 159 DV---------------------------LIAFGA-KVNSLIQAGQVWRLLTSMFIHIGY 190
Query: 146 FHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGL 205
FH+ N+ +L +G E +G + +Y++SG GG++ S LF +S GASGA+ GL
Sbjct: 191 FHLAFNLYALWALGPLTELSYGHGKYFAIYMLSGLGGAMASFLF-SPFLSAGASGAIMGL 249
Query: 206 LGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLG 260
LG+ L + ++ + + LV++I +NL G P +DNFAH+GG +G +G
Sbjct: 250 LGAQLFFIYKRPYLWKSGLGMNLVIVILVNLGFGFWQPGIDNFAHLGGLFTGMFMG 305
>gi|397612848|gb|EJK61912.1| hypothetical protein THAOC_17510, partial [Thalassiosira oceanica]
Length = 434
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA +++ Q RLIT +LHGG+ H++AN SL +G +E FG R Y++S
Sbjct: 243 GAKRSDLLLEGRQLHRLITPVFLHGGIGHLVANSYSLKSMGNNVEGAFGPARTLATYLVS 302
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK---HFLTLVVIIAIN 235
G G++ SA+ N +VGASGA+FGL+G+ + L N I+ + L+ I IN
Sbjct: 303 GVAGNIFSAVN-SPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGIN 361
Query: 236 LAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQF 269
L +G+ P +DN+ HIGGFI G +G +LI P+
Sbjct: 362 LVLGMTNPVIDNWGHIGGFIGG--VGMSWLIGPKL 394
>gi|335041089|ref|ZP_08534206.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
gi|334179066|gb|EGL81714.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
Length = 577
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRL+T +LH G++H++ N L+L +G +E+ FG R +Y+ +G G+L S F
Sbjct: 250 WRLVTPMFLHIGIWHLMFNSLALYFLGGAVERIFGSFRFLWIYMFAGISGTLASFAFT-P 308
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIG 251
N++ GASGA+FG G++L + ++ + ++ I+ NLA+G I+P +DN+ HIG
Sbjct: 309 NLAAGASGAIFGCFGALLYFGLKRRNLFFRTIGMDIIFILIFNLAIGFIIPMIDNYGHIG 368
Query: 252 GFISGFLLGFVFLIRPQFGWVEQ 274
G I GFL + + + W E+
Sbjct: 369 GLIGGFLAAAMVNLPGERQWKER 391
>gi|410460563|ref|ZP_11314238.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
gi|409926821|gb|EKN63973.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
Length = 507
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL K GA + + + WR IT +LH G H+L N L+L +GI +E+ +G R +
Sbjct: 204 TLIKFGA-KYNPAILEGDWWRFITPMFLHIGFLHLLMNTLALYYLGISVERIYGTWRFLI 262
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
LY +G G + S F + +S GASGA+FG G++L + + +++ ++V++
Sbjct: 263 LYFAAGITGGVASFAFT-TQVSAGASGAIFGCFGALLYFGVVHPSLFLRSMGWNIIVVLG 321
Query: 234 INLAVGIL-PHVDNFAHIGGFISGFL 258
INLA G L P VDN AHIGG I GFL
Sbjct: 322 INLAFGFLVPMVDNSAHIGGLIGGFL 347
>gi|407045142|gb|EKE43034.1| peptidase S54 (rhomboid) family protein, partial [Entamoeba
nuttalli P19]
Length = 330
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F+ N +LGP+S + +GA + ++ +Q WRLIT +LHGG+ H+L N+ L +
Sbjct: 114 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 173
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G+ +E+ + R ++Y +SG G+ S + ++I VGASG+L G+ G + ++I N
Sbjct: 174 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTSIGVGASGSLLGIFGGFVVDIIINKN 233
Query: 219 IYTNKHFLTLV----VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+ N+ +L+L+ + I I P +D AH+ GF+ G + F L Q W+ +
Sbjct: 234 KFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFMGGAICAFG-LFAHQNPWITK 292
Query: 275 R 275
+
Sbjct: 293 K 293
>gi|334131953|ref|ZP_08505715.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
gi|333443426|gb|EGK71391.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
Length = 383
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 9/144 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL + +LH G+ H+ NM SL G +E+ FG +R +Y++SG G+LLS L +
Sbjct: 66 QWWRLGSAMFLHFGLLHLGMNMASLFDGGRLVERMFGPLRFLAIYVLSGLTGNLLS-LIV 124
Query: 191 QSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV----VIIAINLAVGI-LPH 243
Q + +S GASGA+FG+ G++L+ L + F+ L + AI + +G+ +P
Sbjct: 125 QGDRAVSGGASGAIFGVYGALLAFLWQQRDTLDRREFVRLFWGAGLFAAITIVLGLNIPG 184
Query: 244 VDNFAHIGGFISGFLLGFVFLIRP 267
+DN AHIGGFISG L G L+RP
Sbjct: 185 IDNGAHIGGFISGLLAG-AALVRP 207
>gi|386284983|ref|ZP_10062202.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
gi|385344386|gb|EIF51103.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
Length = 226
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L MGAL V K + WRL+T +LHGG+ H+L NM SL ++G E F
Sbjct: 39 VLVDMGALFGPLTVLKGEWWRLLTAMFLHGGMTHLLMNMFSLYLVGRGAEMYFDTKSYLS 98
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN---WTIYTNKHFLTLVV 230
+Y SG G L+S ++ VGASGA+FG+ G++ + + +T +
Sbjct: 99 IYFFSGIIGGLVSLYIHPVSVGVGASGAIFGVFGALAGFFLAHREKIASHTKAFMKDFSI 158
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGW 271
IIAINL +G +P +D AHIGG I GF+ GFV P++ W
Sbjct: 159 IIAINLVIGFSIPSIDVSAHIGGLIVGFIGGFVLSKDPKWIW 200
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 17/190 (8%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
+ ++ + +RLIT ++HGG+FHI NM++L +G +E+ +G R +Y++SG
Sbjct: 41 QLGNLITAGEWFRLITSMFVHGGLFHIFFNMIALFYVGNIVERAYGKERFISIYMLSGIF 100
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAINLAVG 239
G+LL+ LF+ + ISVGASGA+FGL+G + + TI L+ II IN+ G
Sbjct: 101 GNLLTHLFLPNAISVGASGAIFGLIGLLFGAGFRHDTPTILRPVTGTALLPIILINVIWG 160
Query: 240 ILP--HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ-RYALSGYSALSRRKFMTYQCIL 296
LP +++NFAH+GG GF FGW+ RY Y +++Y I
Sbjct: 161 FLPGANINNFAHLGGLGIGF----------TFGWLTSIRYTKRSYQGWRTFSYLSYGLI- 209
Query: 297 WIVSLVLVIV 306
I S VL+++
Sbjct: 210 -IASFVLLLI 218
>gi|317128371|ref|YP_004094653.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
gi|315473319|gb|ADU29922.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
Length = 524
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S+ TL GA + ++ + + WR + +LH G FH++ N L+L +G +E+ +G R
Sbjct: 212 STETLISFGA-KFNPLILQGEWWRFFSAMFLHIGFFHLMMNSLALFYLGSAVERIYGTGR 270
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
++Y+I+G GS +++ + +S GASGA+FG G++L I + ++ + ++V
Sbjct: 271 FLIIYLIAGLVGS-IASFALNEQVSAGASGAIFGCFGALLYFGIKHKRLFFRTMGMNVIV 329
Query: 231 IIAINLAVG-ILPHVDNFAHIGGFISGF 257
I++INLA G I+P +DN AHIGG I GF
Sbjct: 330 ILSINLAFGFIVPMIDNGAHIGGLIGGF 357
>gi|148269479|ref|YP_001243939.1| rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170288153|ref|YP_001738391.1| rhomboid family protein [Thermotoga sp. RQ2]
gi|281411803|ref|YP_003345882.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
gi|147735023|gb|ABQ46363.1| Rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170175656|gb|ACB08708.1| Rhomboid family protein [Thermotoga sp. RQ2]
gi|281372906|gb|ADA66468.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
Length = 235
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD +RLIT ++HGG+ HIL N +L G+ +E +G + + Y +G G+L +
Sbjct: 49 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT 108
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGILP-- 242
+F ISVGASGA+FGL+G + + T + K ++L+ II IN+ G LP
Sbjct: 109 HVFYHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLPGT 168
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+++N AH+GGF+SG LLG+ +RP F W +
Sbjct: 169 NINNAAHLGGFLSGMLLGYT--MRP-FSWKRR 197
>gi|256843575|ref|ZP_05549063.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256850051|ref|ZP_05555481.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262047339|ref|ZP_06020296.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|293381863|ref|ZP_06627832.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|423319243|ref|ZP_17297119.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|423320787|ref|ZP_17298659.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
gi|256614995|gb|EEU20196.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713023|gb|EEU28014.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260572313|gb|EEX28876.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|290921584|gb|EFD98617.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|405589376|gb|EKB62943.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|405599039|gb|EKB72221.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
Length = 228
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 102 FKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIG 159
F LG S T L KMGA++ VV HQ WRL T +LH G+ H+++N + + +G
Sbjct: 26 FLVEVFLGGSENTNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGIMHLVSNAIIIYYMG 85
Query: 160 IRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM----LSELI 214
+E G +R + Y+++G GG+L+S F +S GAS ALFGL G+M L L
Sbjct: 86 QYMEPLMGHVRFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLH 145
Query: 215 TNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ + L + INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 146 NPMIAFLGRQAFVLAL---INLALDIFVPGIDIWGHIGGLIAGFLLAII 191
>gi|402594966|gb|EJW88892.1| hypothetical protein WUBG_00197 [Wuchereria bancrofti]
Length = 983
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 27/249 (10%)
Query: 102 FKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
F EN L L ++ G L + Q +RL +LH G+ H + + ++
Sbjct: 746 FHENATLCSQVSCLSEICGMLPFLRKDRPDQWYRLFIPLFLHAGIIHCILTVFIQILYMR 805
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
LE+ G+ RV LLY++SG GG L A+F+ VG +G+ G+ +M +++ +W +
Sbjct: 806 DLEKLLGWARVALLYMVSGIGGYLAGAIFVPYRPEVGPAGSHVGMFAAMYVDVLYSWNLL 865
Query: 221 TNK-HFLTLVVIIAINL-AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
H + + + + L A+G LP VDN+AH+ GFI G L+ L Q
Sbjct: 866 ERPWHAVVQLSLFTLALFAIGTLPWVDNWAHLFGFIFGILISLAVLPYIQ---------- 915
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV---DANDHCSWCHYLSCVP 335
++R T + I+ + SL L L ++L V + C +C Y +C+P
Sbjct: 916 ------TKRHNRTRRIIIVVTSL-----STALSLFVVLLAVFYWPSGFSCVYCEYFNCIP 964
Query: 336 TSRWSCRTE 344
+ C +
Sbjct: 965 YTDHFCDNQ 973
>gi|319651546|ref|ZP_08005673.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
gi|317396613|gb|EFV77324.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
Length = 506
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+ TL K GA ++D + WR +T LH G+ H+L N L+L +G +E+ +G +R
Sbjct: 204 DTSTLIKYGAKFNPLILDG-EWWRFLTPIVLHIGLLHLLMNTLALFYLGSAVERVYGNLR 262
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y+ +GFGG+L S +F +S GASGA+FG G++L + +++ ++V
Sbjct: 263 FLFIYLAAGFGGTLASFIF-SPTLSAGASGAIFGCFGALLYFGLIYPSLFFRTIGFNIIV 321
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
++ INLA G +P +DN HIGG I GFL
Sbjct: 322 VLGINLAFGFTIPGIDNAGHIGGLIGGFL 350
>gi|452991452|emb|CCQ97320.1| putative Rhomboid protease [Clostridium ultunense Esp]
Length = 400
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL + GA + + + WRLIT +LH G FH+ N ++L +G+ +E+ +G R L
Sbjct: 220 TLIRFGA-KYNPAIKAGEWWRLITSIFLHSGFFHVALNSIALYYLGLLVERMYGRARFLL 278
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
+Y ++G GS+ S L+ +SVG+SGA++GL G++L + ++ L+ II
Sbjct: 279 IYFMAGLLGSVASFLY-SDTVSVGSSGAIYGLFGALLFFGMRRRDLFFRSFGKDLLFIIG 337
Query: 234 INLAVGIL-PHVDNFAHIGGFISGFL 258
+NL + +L P +D +AH+GG + GFL
Sbjct: 338 LNLLISVLVPSIDLYAHLGGLVGGFL 363
>gi|428183558|gb|EKX52415.1| hypothetical protein GUITHDRAFT_161181 [Guillardia theta CCMP2712]
Length = 352
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 6/159 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PS V L MG V+ ++ + WRLIT LH G+FH+L N + + GI+LE+E+G
Sbjct: 150 PSPV-LAVMGG-KVAPLIAAGEYWRLITPIMLHAGLFHLLINAFTQCMFGIQLEREWGAA 207
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW----TIYTNKHF 225
++ ++Y+ +G G++LS LF +S+G SGA+FGL G+ ++ + W +
Sbjct: 208 QIAIIYVCAGIYGNILSVLFAPQALSIGCSGAIFGLFGAQVAYITGMWRQLGDLQKKMLI 267
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
L+L + VD AH+GGF++G ++G +
Sbjct: 268 LSLSLSFIFIFVFSFSVGVDMSAHMGGFVAGMVMGLGYF 306
>gi|403252324|ref|ZP_10918634.1| Rhomboid family protein [Thermotoga sp. EMP]
gi|402812337|gb|EJX26816.1| Rhomboid family protein [Thermotoga sp. EMP]
Length = 235
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD +RLIT ++HGG+ HIL N +L G+ +E +G + + Y +G G+L +
Sbjct: 49 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT 108
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGILP-- 242
+F ISVGASGA+FGL+G + + T + K ++L+ II IN+ G LP
Sbjct: 109 HVFYHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLPGT 168
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+++N AH+GGF+SG LLG+ +RP F W +
Sbjct: 169 NINNAAHLGGFLSGMLLGYT--MRP-FSWKRR 197
>gi|311030831|ref|ZP_07708921.1| Serine protease of Rhomboid family, contains TPR repeats [Bacillus
sp. m3-13]
Length = 503
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+S TL K GA + + + + WR T LH G H+L N +++ +G +E+ +G IR
Sbjct: 202 NSETLVKYGA-KYNPAILEGEWWRFFTPIVLHIGFLHLLLNTMAIFYLGSAVERIYGNIR 260
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y+ +GF GSL S +F S++S GASGA+FG G++L I + ++ ++V
Sbjct: 261 FLAIYLFAGFTGSLASFVFT-SSLSAGASGAIFGCFGALLFVGIIHPKMFFRTMGANILV 319
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
+I INLA+G +P +DN HIGG I GFL
Sbjct: 320 LIGINLAIGFTIPGIDNAGHIGGLIGGFL 348
>gi|256850860|ref|ZP_05556249.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260661071|ref|ZP_05861985.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
gi|256615922|gb|EEU21110.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260548008|gb|EEX23984.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
Length = 215
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F+ + F S L K+GA V+ Q WRL T +LH G+ H++ N ++L
Sbjct: 13 FALETFNGGS---EDSAVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLF 69
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELIT 215
+G LE G +R ++Y+++G GG+L++ F N +S GAS ALFGL G+M++ I
Sbjct: 70 YMGQYLEPMLGHVRFLIIYLLAGVGGNLMTMAFGSDNAVSAGASTALFGLFGAMIALGIA 129
Query: 216 NWT----IYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLL 259
N T Y + L V INL I +P +D + H+GG I+GFLL
Sbjct: 130 NRTHEGMAYLGRQSFVLAV---INLLFDINVPQIDTWGHVGGLIAGFLL 175
>gi|317472135|ref|ZP_07931467.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900539|gb|EFV22521.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
Length = 309
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
L +S + GAL + + +RL+T N+LH G H+ NM+ ++IG RLE F
Sbjct: 141 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 200
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTN 222
G R LY+ +G GS++SA++ + SVGASGA+FGL+G+ML LI N
Sbjct: 201 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAMLWILIKNRGYQKE 260
Query: 223 KHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQFG 270
+ + ++IA +L G VDN AHIGG I GFLL + L R G
Sbjct: 261 FYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 308
>gi|152993649|ref|YP_001359370.1| hypothetical protein SUN_2072 [Sulfurovum sp. NBC37-1]
gi|151425510|dbj|BAF73013.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 192
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L MGAL V K + WRL T +LHGG+ HIL NM+SL +IG +E F
Sbjct: 5 VLVDMGALYGPLTVLKGEWWRLFTAMFLHGGMTHILMNMVSLYIIGRGMEMYFDTKSYLS 64
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT---IYTNKHFLTLVV 230
+Y+ SG G L+S +++ +GASGA+FG+ G++ I + +T V
Sbjct: 65 IYLFSGLLGGLVSLYIHPASVGIGASGAIFGVFGALAGFFIAHRKHLGKHTKAFMKEFTV 124
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
II INL +G +P+VD AH+ G + GF+ G++ P+F
Sbjct: 125 IIVINLVIGFSIPNVDVSAHVAGTVVGFIGGYLLSKDPKF 164
>gi|309808584|ref|ZP_07702478.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
gi|308168180|gb|EFO70304.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
Length = 182
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
VV K Q WRL T ++H G FHI+ N++ + G+ LEQ G IR +Y++SG GG+L
Sbjct: 5 AVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTIYLLSGVGGNL 64
Query: 185 LSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT-----NKHFLTLVVIIAINLAV 238
LS Q N IS GAS A+FGL+GS+L+ N + FL L+ I ++
Sbjct: 65 LSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLLICNIVVDF-- 122
Query: 239 GILPHVDNFAHIGGFISGFLL 259
+P VD HIGG I+GFLL
Sbjct: 123 -FMPSVDIIGHIGGTITGFLL 142
>gi|389584264|dbj|GAB66997.1| rhomboid protease [Plasmodium cynomolgi strain B]
Length = 621
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
++G L+ + + + + +RL +LHGG HI+ N++ + I +E ++GFIR +L+
Sbjct: 305 NQLGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVICQIQILWIIEPDWGFIRTLILF 364
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----FLTLVVI 231
SG G+LLSA+ +++G+SGAL+GL+G++ + I W F+ +V I
Sbjct: 365 FTSGVTGNLLSAVCDPCGVTIGSSGALYGLIGALFTYYIEYWKTIPRPCCVVIFMLIVTI 424
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
I +G+ + DN+AH+GG + G L GF
Sbjct: 425 FGI--FIGMFGYTDNYAHMGGCLGGILYGFA 453
>gi|168699238|ref|ZP_02731515.1| Rhomboid-like protein [Gemmata obscuriglobus UQM 2246]
Length = 418
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PS L K GA D + WR +TC ++H G+ HIL NM L G +E+ G
Sbjct: 100 PSPAELLKWGA-DFGPNTLNGEWWRALTCMFVHIGILHILMNMWVLSATGPLVERMLGNA 158
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL- 228
+ Y++SG GGSL S +S GASGA+FG+ G++L L T L
Sbjct: 159 GFLVAYLVSGLGGSLASLWLNPGVVSAGASGAVFGIYGALLGLLQRQRTSIPPAALTGLK 218
Query: 229 ---VVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
+ +A N+ G+ P++D AH GGF++GFL G V L RP + +G +A
Sbjct: 219 NSGLGFLAYNVFFGLTQPNIDLAAHAGGFVTGFLCGLV-LSRP--------FTPAGVAAR 269
Query: 285 SRRKFMTYQCILWIVSLVLVIVGLTL 310
R F+T V++ VGLTL
Sbjct: 270 PTRNFVTG-----FGGFVVITVGLTL 290
>gi|331268929|ref|YP_004395421.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
gi|329125479|gb|AEB75424.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
Length = 335
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RLITC +LHGG+ H++ NM +L +G +E+ +G ++ ++Y++ G S+ S +F
Sbjct: 196 QYYRLITCMFLHGGLMHLILNMYALKALGPMIEKSYGKMKYVIIYLVGGLISSISSYIFS 255
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAH 249
+S+GASGA+F LLG++L I ++ +V +I IN+ +G+ +P++DNFAH
Sbjct: 256 NG-VSIGASGAIFSLLGAILVLTIKMRSVAGKDVIKNVVSVIVINIFIGLAIPNIDNFAH 314
Query: 250 IGGFISGFLLGFVF 263
IGG + G L +
Sbjct: 315 IGGLLGGVFLSIIL 328
>gi|255952919|ref|XP_002567212.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588923|emb|CAP95039.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 49/257 (19%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R I ++HGG HI N+L + +G +E+ G R L Y SG G +L +
Sbjct: 245 NQWYRFIIPIFMHGGFIHIGFNLLVQMTMGADMERLIGMWRYTLTYFASGIFGFVLGGNY 304
Query: 190 I-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDN 246
Q + S G SGALFG+L L +L+ W + + +++ + ++ +G+LP +DN
Sbjct: 305 AAQLDPSDGCSGALFGILALYLLDLLYEWPQRESPWVELIIMILGVGVSFVLGLLPGLDN 364
Query: 247 FAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSGYSALSRRK----FMTY---- 292
F+HIGGFI G +G + +R + G Q Y A+SG + FM +
Sbjct: 365 FSHIGGFIMGLAIGMTIMRSPNALRERIGLARQPYVAMSGAGQAGPEQKTTSFMDFFKGK 424
Query: 293 ---------------------------QCILWIV---SLVLVIVGLTLGLVMLLRGVDAN 322
+ W+V +LV V+VG + +V + +N
Sbjct: 425 RGLTSSSAETPGSTSGPLNFFKGRKPLWWLWWLVRAGALVAVLVGFIMLIVNFYKYPSSN 484
Query: 323 DHCSWCHYLSCVPTSRW 339
CSWC+ LSC+ + W
Sbjct: 485 --CSWCYRLSCMDVNGW 499
>gi|430805416|ref|ZP_19432531.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
gi|429502334|gb|ELA00646.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
Length = 533
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 12/145 (8%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF- 189
Q WRL+T +LHG + H+ ANM+ L ++G +E+ FG L+Y+ +G GS LS F
Sbjct: 219 QWWRLLTATFLHGSLKHLAANMVVLYLLGKHVERFFGTRSFLLIYVGAGLLGSALSLYFA 278
Query: 190 IQSNISVGASGALFGLLGSML-------SELITNWTIYTNKHFLTLVVIIAINLAVGILP 242
Q+++SVGASGA+FG+ G++L EL N N+ V++I +LA G L
Sbjct: 279 AQTSVSVGASGAVFGIGGALLVAALLHRRELPQN---IRNRLVSDAVIMIGYSLAQGFLS 335
Query: 243 -HVDNFAHIGGFISGFLLGFVFLIR 266
VDN AH+GG I G LL +R
Sbjct: 336 TRVDNAAHVGGLIGGVLLALCLPVR 360
>gi|417009713|ref|ZP_11945885.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
gi|328464817|gb|EGF36130.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
Length = 226
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL +LH GV H+++N + + +G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKHFLTL 228
Y+++G GG+L S F +S GAS ALFGL G+M L L + + L L
Sbjct: 98 TYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLYNPMISFLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLITGFLLAII 189
>gi|403331557|gb|EJY64731.1| Rhomboid family protein [Oxytricha trifallax]
Length = 278
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 93 FLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANM 152
++ +++ N LL P S L G + ++Q WR I +LH H+ +N+
Sbjct: 57 YIASVAYKGISNNGLLAPQSEALFDFGQKYPYYMRYQYQVWRFIMPIFLHADFVHLTSNI 116
Query: 153 LSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSE 212
S V G LE GF +LY +SG GG L S+L SVGAS A+FGL+GS +
Sbjct: 117 FSQFVFGSYLESTIGFFNFTILYFLSGIGGILFSSL-ASDATSVGASTAIFGLMGSFAAY 175
Query: 213 LITNWTIYTNKHFLTLVVIIAINLAVGIL---------PHVDNFAHIGGFISGFLL 259
LI NW + IAI L +G+L +D+ H+GGF++G +L
Sbjct: 176 LIVNWKNLERQP--QQKYTIAIFLIIGLLMNLTQAQSNSKIDSIGHLGGFLTGLIL 229
>gi|392571168|gb|EIW64340.1| rhomboid-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 317
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 31/213 (14%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF- 189
Q +R IT +LH G+ H L NML+ L ++E+E G + +LY +G G++L F
Sbjct: 123 QWFRFITPIFLHAGLIHYLLNMLAQLTASAQIEREMGSLPFLILYSAAGIFGNVLGGNFA 182
Query: 190 IQSNISVGASGALFGLLGSMLSELITNW--TIYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ + SVGASGA+FG + +L +W T + ++V + I +A+G +P
Sbjct: 183 LLGSPSVGASGAIFGTIAVAWIDLFAHWRYTFRPGRKLAFMIVELVIGVAIGFIP----- 237
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+H+GG G L+ A++ Y +S ++ I+ ++ L+ V +
Sbjct: 238 SHLGGLAMGLLV-----------------AMALYPIISPSN--RHRIIVIVLRLIAVPLA 278
Query: 308 LTLGLVMLLRGV---DANDHCSWCHYLSCVPTS 337
+ + +V+L+R D + CSWC YLSC+PTS
Sbjct: 279 IVM-MVVLIRNFYKSDPSAACSWCRYLSCIPTS 310
>gi|317500904|ref|ZP_07959115.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089196|ref|ZP_08338098.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439355|ref|ZP_08618969.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897702|gb|EFV19762.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405748|gb|EGG85277.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016163|gb|EGN45955.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 200
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 6/155 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ + + + +R+ TC +LH G+ H++ NM+ L +G LE E G +R ++Y +S
Sbjct: 40 GAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKLRFIIIYFLS 99
Query: 179 GFGGSLLSALFI----QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G GG++LS + +S +S GASGA+FGL+G++L +I N ++ ++ +
Sbjct: 100 GIGGNILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIANRGRLGQLSGRGMIFMVVL 159
Query: 235 NLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+L G+ VDN AHIGG I GF+ V L RP+
Sbjct: 160 SLYFGLTSSGVDNMAHIGGLICGFIFA-VILYRPK 193
>gi|167748326|ref|ZP_02420453.1| hypothetical protein ANACAC_03070 [Anaerostipes caccae DSM 14662]
gi|167652318|gb|EDR96447.1| peptidase, S54 family [Anaerostipes caccae DSM 14662]
Length = 280
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
L +S + GAL + + +RL+T N+LH G H+ NM+ ++IG RLE F
Sbjct: 112 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 171
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTN 222
G R LY+ +G GS++SA++ + SVGASGA+FGL+G+ML LI N
Sbjct: 172 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAMLWILIKNRGYQKE 231
Query: 223 KHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQFG 270
+ + ++IA +L G VDN AHIGG I GFLL + L R G
Sbjct: 232 FYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 279
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
E + P + L G+L V +V + + WRL+T +LH V H+ NM+SL +IG L
Sbjct: 96 AEAGITNPGNAALMSDGSL-VKGIVGEGEYWRLLTAGFLHFSVMHVAVNMISLYIIGRDL 154
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYT 221
E+ G R +Y+IS GGS LF N+ + GASGA++GL+G+ML ++ T
Sbjct: 155 ERALGTYRYLAVYLISLLGGSAAVMLFEADNVQTAGASGAIYGLIGAMLVIVLKARVPAT 214
Query: 222 NKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG 280
++VII N+ + + LP + AH+GG G + P G V R L
Sbjct: 215 -----PVLVIIGFNVVLSVSLPGISLMAHLGGLAFGVAATAAIVYLP--GLVLPRARLDA 267
Query: 281 YSALSRRKFMTYQCILW--IVSLVLVIVGLTLGLVMLLRG 318
SA + W +V+L++V +GL +G ML G
Sbjct: 268 ASA---------NRVAWAALVTLLVVALGLGVGAGMLYDG 298
>gi|227904420|ref|ZP_04022225.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
gi|227867795|gb|EEJ75216.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
Length = 226
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL T +LH GV H+++N + + +G +E G R +
Sbjct: 38 VLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFLV 97
Query: 174 LYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNW----TIYTNKHFLTL 228
Y+++ GG+L+S F +S GAS ALFGL G+M + + N+ Y + L L
Sbjct: 98 TYLLAEIGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNFRNPMISYLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLIAGFLLAII 189
>gi|295693318|ref|YP_003601928.1| hypothetical protein LCRIS_01456 [Lactobacillus crispatus ST1]
gi|295031424|emb|CBL50903.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 228
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 107 LLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
LG S T L KMGA++ VV HQ WRL +LH G+ H+++N + + +G +E
Sbjct: 31 FLGGSENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEP 90
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM----LSELITNWTI 219
G +R + Y+++G GG+L+S F +S GAS ALFGL G+M L L
Sbjct: 91 LMGHVRFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLHNPMIA 150
Query: 220 YTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ + L + INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 151 FLGRQAFVLAL---INLALDIFVPGIDIWGHIGGLIAGFLLAII 191
>gi|227877719|ref|ZP_03995755.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|312984383|ref|ZP_07791722.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
gi|227862707|gb|EEJ70190.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|310894227|gb|EFQ43310.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
Length = 228
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 107 LLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
LG S T L KMGA++ VV HQ WRL +LH G+ H+++N + + +G +E
Sbjct: 31 FLGGSENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEP 90
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM----LSELITNWTI 219
G +R + Y+++G GG+L+S F +S GAS ALFGL G+M L L
Sbjct: 91 LMGHVRFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLHNPMIA 150
Query: 220 YTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ + L + INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 151 FLGRQAFVLAL---INLALDIFVPGIDIWGHIGGLIAGFLLAII 191
>gi|94312789|ref|YP_585998.1| intramembrane serine protease [Cupriavidus metallidurans CH34]
gi|93356641|gb|ABF10729.1| putative intramembrane serine protease [Cupriavidus metallidurans
CH34]
Length = 554
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF- 189
Q WRL+T +LHG + H+ ANM+ L ++G +E+ FG L+Y+ +G GS LS F
Sbjct: 240 QWWRLLTATFLHGSLKHLAANMVVLYLLGTHVERFFGTRSFLLIYVGAGLLGSALSLYFA 299
Query: 190 IQSNISVGASGALFGLLGSML-SELITNWTI---YTNKHFLTLVVIIAINLAVGILP-HV 244
Q+++SVGASGA+FG+ G++L + L+ + N+ V++I +LA G L V
Sbjct: 300 AQASVSVGASGAVFGIGGALLVAALLHRRELPQSIRNRLVSDAVIMIGYSLAQGFLSTRV 359
Query: 245 DNFAHIGGFISGFLLGFVFLIR 266
DN AH+GG I G LL +R
Sbjct: 360 DNAAHVGGLIGGALLALCLPVR 381
>gi|449479129|ref|XP_002195482.2| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2
[Taeniopygia guttata]
Length = 818
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 615 QFYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIFL 674
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 675 PYRAEVGPAGSQFGLLACLFVELFQSWQVLEKPWKAFLNLFGIVLFLFICGLLPWIDNIA 734
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GF+SG LL F FL FG V++ R++ M IVSL LV +GL
Sbjct: 735 HLFGFLSGLLLSFAFLPYITFGTVDK----------YRKRAMI------IVSL-LVFLGL 777
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C+P TS++ + E
Sbjct: 778 FASLVVWLYVYPVN--WRWVEYLTCLPFTSKFCEKYE 812
>gi|397576168|gb|EJK50102.1| hypothetical protein THAOC_30966 [Thalassiosira oceanica]
Length = 527
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA +++ Q RLIT +LHGG+ H+++N SL +G +E FG R Y++S
Sbjct: 232 GAKRSDLLLEGRQLHRLITPVFLHGGIGHLVSNSYSLKSMGNNVEGAFGPARTLATYLVS 291
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK---HFLTLVVIIAIN 235
G G++ SA+ N +VGASGA+FGL+G+ + L N I+ + L+ I IN
Sbjct: 292 GVAGNIFSAVN-SPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGIN 350
Query: 236 LAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQF 269
L +G+ P +DN+ H+GGFI G +G +LI P+
Sbjct: 351 LVLGMTNPVIDNWGHLGGFIGG--VGMSWLIGPKL 383
>gi|170593681|ref|XP_001901592.1| Rhomboid family protein [Brugia malayi]
gi|158590536|gb|EDP29151.1| Rhomboid family protein [Brugia malayi]
Length = 1013
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 102 FKENPLLGPSSVTLQKM-GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGI 160
F EN L L ++ G L + Q +RL +LH G+ H + + ++
Sbjct: 776 FHENATLCSQVSCLSEVCGMLPFLRKDQPDQWYRLFIPLFLHAGIIHCILTIFIQILYMR 835
Query: 161 RLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY 220
LE+ G+ R+ LLY++SG GG L A+F+ VG +G+ G+ +M +++ +W +
Sbjct: 836 DLEKLLGWARIALLYMVSGVGGYLAGAIFVPYRPEVGPAGSHVGMFAAMYVDVLYSWNLL 895
Query: 221 TNK-HFLTLVVIIAINL-AVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
H + + + + L +G LP VDN+AH+ GFI G L+ L Q
Sbjct: 896 ERPWHAVVQLSLFTLALFTIGTLPWVDNWAHLFGFIFGILISLAVLPYIQ---------- 945
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV-DANDHCSWCHYLSCVPTS 337
++R T + I+ + SL L+L +V+L + +C +C Y +C+P +
Sbjct: 946 ------TKRHNRTRRIIIVVTSLT---TALSLFIVLLAVFYWPSGFNCVYCEYFNCIPYT 996
Query: 338 RWSCRTE 344
C +
Sbjct: 997 DHFCDNQ 1003
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 14/184 (7%)
Query: 89 CVARFLGRFSF-QPFKEN-PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVF 146
C+A FL + S PF + L+G + V ++G DV V + Q +RL+T +LHG
Sbjct: 110 CLAVFLAQLSMGDPFTDRFDLMGRAYVP--ELG--DVEGVAEG-QWYRLLTSMFLHGSYI 164
Query: 147 HILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGL 205
HIL NMLSL IG LE G +R LY++SG GS L+ L +N S+GASGA+FGL
Sbjct: 165 HILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALTYLIAAANQPSLGASGAIFGL 224
Query: 206 LGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFL 264
G+ + ++ Y + + L+V INL L + AHIGG ++G L+G+ +
Sbjct: 225 FGA--TAVLMRRLQYDMRPVIALLV---INLIFTFGLAQIAWQAHIGGLVAGLLVGYAMV 279
Query: 265 IRPQ 268
P+
Sbjct: 280 HAPR 283
>gi|418476663|ref|ZP_13045815.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
gi|371542672|gb|EHN71698.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
Length = 297
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 131/285 (45%), Gaps = 61/285 (21%)
Query: 36 RPQGVSAPPPAVY-------GEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS 88
R G + P PA + G I + VT ++ + N+A+F++ + V +
Sbjct: 57 RTPGATGPAPAAFQPRTLAGGTIAADPRLVTKVL---IGVNLALFLVQLSVGD------- 106
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
RF RF LLG + +T + V + Q +RL+T +LH G HI
Sbjct: 107 ---RFTQRFE--------LLGQAYITFP-----GPVEGVAEGQWYRLLTAMFLHTGYMHI 150
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLG 207
L NMLSL +G LE G R LY SG GS L+ L + N S+GASGA+FGL G
Sbjct: 151 LFNMLSLWWLGGPLEGALGRARYLALYFCSGLAGSALTYLIAEPNQPSLGASGAIFGLFG 210
Query: 208 SMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
+ + L+ N +V+++AINL ++ AH+GG ++G ++G+ L
Sbjct: 211 AT-ATLVRR----LNADMRPVVILLAINLVFTFTWANIAWQAHVGGLVAGAVIGYAMLHA 265
Query: 267 PQFGWVEQRYALSGYSALSRRKFMTY-QCILWIVSLVLVIVGLTL 310
P+ RR + Y C L +V+ +VGLTL
Sbjct: 266 PR----------------QRRTLVQYGTCALVLVA----VVGLTL 290
>gi|313884239|ref|ZP_07818005.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
gi|312620686|gb|EFR32109.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
Length = 229
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 37/209 (17%)
Query: 60 WLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMG 119
WL F+V NI F T V +S L G
Sbjct: 10 WLTYAFLVINIGWFAFTYLVYGTTTDSR--------------------------VLLDTG 43
Query: 120 ALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
A + V H+ WR+++ ++H G+ H+L NM++L +G LE+ G I+ L+Y+I+G
Sbjct: 44 ANFMPYVFQNHEYWRILSATFVHIGMSHLLFNMMTLYFMGPELEEILGHIKFLLIYLIAG 103
Query: 180 FGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL-----TLVVIIAI 234
GG+L S F + +S GAS ALFG M + I I+ + H+L + ++++ +
Sbjct: 104 IGGNLTSLAF-NTGVSAGASTALFG----MFAAFIVLAIIHPDSHYLWQRSRSFIILVGL 158
Query: 235 NLAVGIL-PHVDNFAHIGGFISGFLLGFV 262
NL G L P +DN+ H+GG + G L +V
Sbjct: 159 NLVNGFLSPGIDNWGHLGGLLFGALATYV 187
>gi|336435773|ref|ZP_08615487.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000268|gb|EGN30420.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 207
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 7/155 (4%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ L + GA+ V++ + +RL+T +LH G+ H+L NM+ L +G LE G IR
Sbjct: 32 DTMFLLEHGAMYAPYVLEGKEDYRLVTSMFLHFGMQHLLNNMVMLGALGWNLEAVTGKIR 91
Query: 171 VGLLYIISGFGGSLLSALFIQSN-----ISVGASGALFGLLGSMLSELITNWTIYTNKHF 225
L+Y+ SG GG+LLS LF+ N +S GASGA+FGL+G++L I N
Sbjct: 92 FILIYMFSGIGGNLLS-LFLNRNSGVYVVSAGASGAVFGLMGALLFAAIRNRGHVGRVSR 150
Query: 226 LTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLL 259
L ++A++L G+ VDN AHIGG I GFLL
Sbjct: 151 RGLFFMVALSLYFGLSSSGVDNAAHIGGLICGFLL 185
>gi|161507831|ref|YP_001577795.1| hypothetical protein lhv_1567 [Lactobacillus helveticus DPC 4571]
gi|160348820|gb|ABX27494.1| putative membrane protein [Lactobacillus helveticus DPC 4571]
Length = 226
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL +LH GV H+++N + + +G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN----WTIYTNKHFLTL 228
Y+++G GG+L S F +S GAS ALFGL G+M++ + N + + L L
Sbjct: 98 TYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLITGFLLAII 189
>gi|227530504|ref|ZP_03960553.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
gi|227349609|gb|EEJ39900.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
Length = 220
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 16/149 (10%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + Q WRLIT +LH G+ H++ N ++L +G+ +E+ F R+ ++Y++S F G
Sbjct: 45 VTSLIHEGQWWRLITPVFLHIGIAHLIINSITLYFLGMYIEELFSHWRMLVIYLVSAFTG 104
Query: 183 SLLSALFIQSNISVGASGALFGLLGSML--------SELITNWTIYTNKHFLTLVVIIAI 234
+L SA F+ + IS GAS ALFGL G+ L +ELI + ++ FL LV I
Sbjct: 105 NLASAYFLPNTISAGASTALFGLFGAFLMLGESFHDNELIQD----LSRQFLILV---GI 157
Query: 235 NLAVG-ILPHVDNFAHIGGFISGFLLGFV 262
N+ + LP VD HIGG + GFL+ +V
Sbjct: 158 NIVMDFFLPGVDLAGHIGGLLGGFLISYV 186
>gi|385813424|ref|YP_005849817.1| S54 family peptidase [Lactobacillus helveticus H10]
gi|323466143|gb|ADX69830.1| S54 family peptidase [Lactobacillus helveticus H10]
Length = 226
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL +LH GV H+++N + + +G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN----WTIYTNKHFLTL 228
Y+++G GG+L S F +S GAS ALFGL G+M++ + N + + L L
Sbjct: 98 TYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLITGFLLAII 189
>gi|227892800|ref|ZP_04010605.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
gi|227865441|gb|EEJ72862.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
Length = 226
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L KMGA++ VV HQ WRL T +LH GV H+++N + + +G +E G
Sbjct: 34 ESTNVLMKMGAMNNLAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHY 93
Query: 170 RVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITN----WTIYTNKH 224
R Y+++G GG+L S F +S GAS ALFGL G+M + + N + +
Sbjct: 94 RYLATYLLAGIGGNLFSLAFSADRGLSAGASTALFGLFGAMTAIGLRNIHNPMISFLGRQ 153
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
L + INLA+ I +P +D + H+GG I+GFLL V
Sbjct: 154 AFVLAI---INLALDIFIPGIDIWGHVGGLITGFLLAIV 189
>gi|153815443|ref|ZP_01968111.1| hypothetical protein RUMTOR_01678 [Ruminococcus torques ATCC 27756]
gi|145847302|gb|EDK24220.1| peptidase, S54 family [Ruminococcus torques ATCC 27756]
Length = 175
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
+ + + GA+ + + + +R+ TC +LH G+ H++ NM+ L +G LE E G +
Sbjct: 6 EDAAFMLQHGAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKL 65
Query: 170 RVGLLYIISGFGGSLLSALFI----QSNISVGASGALFGLLGSMLSELITNWTIYTNKHF 225
R ++Y +SG GG++LS + +S +S GASGA+FGL+G++L +I N
Sbjct: 66 RFIIIYFLSGIGGNILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIANRGRLGQLSG 125
Query: 226 LTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
++ ++ ++L G+ VDN AHIGG I GF+ V L RP+
Sbjct: 126 RGMIFMVVLSLYFGLTSSGVDNMAHIGGLICGFIFA-VILYRPK 168
>gi|418630551|ref|ZP_13193032.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
gi|374837741|gb|EHS01304.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKTHRSLFW 344
>gi|345022094|ref|ZP_08785707.1| hypothetical protein OTW25_12319 [Ornithinibacillus scapharcae
TW25]
Length = 517
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 29/221 (13%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR++T +LH G+FH ++NML L G E+ +G +R +Y+++G GS+ S F+ +
Sbjct: 230 WRVVTSMFLHIGLFHFISNMLFLYYFGSLAEKIYGSLRFFFIYMLAGIAGSVASFAFV-T 288
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIG 251
N+S GASGAL+GL G+ + + + I+ +++++ IN+ +G +LP +D AH+G
Sbjct: 289 NLSAGASGALYGLFGAFIYFGLFHKKIFFRTIGKDILMLLGINIVLGFVLPQLDVTAHMG 348
Query: 252 GFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLG 311
G ++GF+ +G +++ + Q + +I+ + + L G
Sbjct: 349 GLVAGFI-------------------AAGIVHFPKKRKLGIQALAFIIYAIAIYSVLMFG 389
Query: 312 LVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQ 352
+ N+ + ++L + T R E S T+
Sbjct: 390 V--------TNNQTNPTYHLMNIETLIQEERYEEVIDSATK 422
>gi|328714292|ref|XP_003245324.1| PREDICTED: rhomboid family member 1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL ++H G+ H+ ++ + LE+ G +R+ L+Y+ SG G+L SA+F+
Sbjct: 1150 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1209
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL ++ E++ W + + L+ I + +G+LP VDNFA
Sbjct: 1210 PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFA 1269
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFLL + L FG +++ ++ F+ + C+L + L L+++ L
Sbjct: 1270 HLFGFIFGFLLSYALLPFVSFGPYDRQ----------KKIFLIWVCLLSALFLFLLLLLL 1319
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ M C C Y +C+P ++ C
Sbjct: 1320 FYLIPMY--------DCEMCSYFNCIPITKDFC 1344
>gi|154505636|ref|ZP_02042374.1| hypothetical protein RUMGNA_03175 [Ruminococcus gnavus ATCC 29149]
gi|336431736|ref|ZP_08611578.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794075|gb|EDN76495.1| putative rhomboid protease GluP [Ruminococcus gnavus ATCC 29149]
gi|336019755|gb|EGN49477.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 200
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 8/170 (4%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
+G F F NP ++V + K GA+ + + Q +RLITC +LH G+ H++ NM+
Sbjct: 18 MGIFFLLSFLGNP---ENAVFMIKYGAMYPPLIFEDAQYYRLITCIFLHFGIDHLMNNMV 74
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL--FIQSNISV--GASGALFGLLGSM 209
L +G LE+E G + L+Y +SG G +L+S F N++V GASGA+FGLLG++
Sbjct: 75 MLGALGWNLEKEIGSFKFLLIYFVSGIGANLISLAMDFYTGNLAVSAGASGAIFGLLGAL 134
Query: 210 LSELITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFL 258
L +I N ++ ++ ++L G VDN AH+GG I GFL
Sbjct: 135 LWVVIRNRGKAGRLTGRGMLFMVLLSLYFGFTSTGVDNAAHVGGLICGFL 184
>gi|328714294|ref|XP_001950020.2| PREDICTED: rhomboid family member 1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1386
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 20/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL ++H G+ H+ ++ + LE+ G +R+ L+Y+ SG G+L SA+F+
Sbjct: 1178 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1237
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL ++ E++ W + + L+ I + +G+LP VDNFA
Sbjct: 1238 PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFA 1297
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFLL + L FG +++ ++ F+ + C+L + L L+++ L
Sbjct: 1298 HLFGFIFGFLLSYALLPFVSFGPYDRQ----------KKIFLIWVCLLSALFLFLLLLLL 1347
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+ M C C Y +C+P ++ C
Sbjct: 1348 FYLIPMY--------DCEMCSYFNCIPITKDFC 1372
>gi|416125288|ref|ZP_11595886.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|420178246|ref|ZP_14684579.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|420180055|ref|ZP_14686315.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
gi|319400885|gb|EFV89104.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|394246872|gb|EJD92124.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|394251487|gb|EJD96572.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKTHRSLFW 344
>gi|418633195|ref|ZP_13195612.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|420190163|ref|ZP_14696107.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|420204465|ref|ZP_14710023.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
gi|374840014|gb|EHS03521.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|394259054|gb|EJE03924.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|394273475|gb|EJE17906.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKTHRSLFW 344
>gi|403514649|ref|YP_006655469.1| S54 family peptidase [Lactobacillus helveticus R0052]
gi|403080087|gb|AFR21665.1| S54 family peptidase [Lactobacillus helveticus R0052]
Length = 226
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL +LH GV H+++N + + +G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN----WTIYTNKHFLTL 228
Y+++G GG+L S F +S GAS ALFGL G+M++ + N + + L L
Sbjct: 98 TYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLITGFLLAII 189
>gi|156041048|ref|XP_001587510.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980]
gi|154695886|gb|EDN95624.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R I +LH G+ HI NML + +G +E G IR L+YI SG G +L F
Sbjct: 285 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 344
Query: 191 QSNIS-VGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ IS GASGALFGL+ L +L+ W + K +++ + I+ +G+LP +DNF
Sbjct: 345 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFILLDVIISFVLGLLPGLDNF 404
Query: 248 AHIGGFISGFLLGFVFLIRP 267
+HIGGF+ GF+LG L P
Sbjct: 405 SHIGGFLMGFVLGLSILRSP 424
>gi|420163079|ref|ZP_14669826.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|420167946|ref|ZP_14674598.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
gi|394234768|gb|EJD80342.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|394237974|gb|EJD83460.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|384251749|gb|EIE25226.1| rhomboid-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 278
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V++ V + +RL+TC +LH G+ H+ N +L IG +E G+ +Y++SG
Sbjct: 116 KVNEKVASGEFYRLLTCTFLHAGILHLGLNCWALYSIGPEVEGVMGYSTFAAIYVLSGLA 175
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV-IIAINLAVGI 240
GS S LF I+VGASGA+FGLLG+ + N + + LT + I+A+N+ +G
Sbjct: 176 GSTASFLF-SDLITVGASGAIFGLLGATAGYFLRNRALQGSTQQLTYIAGIVALNIFLGA 234
Query: 241 LP--HVDNFAHIGGFISGFLLGFV 262
P +DN H+GG +G LG++
Sbjct: 235 SPGSMIDNSGHLGGLFTGVALGYI 258
>gi|418411961|ref|ZP_12985227.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
gi|410891544|gb|EKS39341.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|420211212|ref|ZP_14716586.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
gi|394281665|gb|EJE25891.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
Length = 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|27468153|ref|NP_764790.1| hypothetical protein SE1235 [Staphylococcus epidermidis ATCC 12228]
gi|57867074|ref|YP_188690.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251810965|ref|ZP_04825438.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876025|ref|ZP_06284892.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|293366490|ref|ZP_06613167.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646984|ref|ZP_12296833.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|417656060|ref|ZP_12305751.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|417659640|ref|ZP_12309240.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|417908746|ref|ZP_12552503.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|417912278|ref|ZP_12555973.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|417913747|ref|ZP_12557410.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|418609437|ref|ZP_13172589.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|418612797|ref|ZP_13175821.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|418616300|ref|ZP_13179225.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|418625262|ref|ZP_13187915.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|418626366|ref|ZP_13188978.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|418629382|ref|ZP_13191890.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|418665219|ref|ZP_13226669.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|419771673|ref|ZP_14297719.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|420165544|ref|ZP_14672235.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|420170258|ref|ZP_14676819.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|420183211|ref|ZP_14689344.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|420194847|ref|ZP_14700644.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|420197429|ref|ZP_14703153.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|420201679|ref|ZP_14707289.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|420206132|ref|ZP_14711642.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|420209055|ref|ZP_14714493.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|420214009|ref|ZP_14719289.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|420221664|ref|ZP_14726591.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|420225746|ref|ZP_14730573.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|420227336|ref|ZP_14732107.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|420229653|ref|ZP_14734358.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|420234711|ref|ZP_14739271.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|421606956|ref|ZP_16048207.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
gi|27315699|gb|AAO04834.1|AE016748_68 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637732|gb|AAW54520.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251805475|gb|EES58132.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295050|gb|EFA87577.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|291319259|gb|EFE59628.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725333|gb|EGG61816.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|329735277|gb|EGG71569.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|329737310|gb|EGG73564.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|341651289|gb|EGS75094.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|341654769|gb|EGS78507.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|341656107|gb|EGS79830.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|374407651|gb|EHQ78503.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|374409194|gb|EHQ79994.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|374817874|gb|EHR82049.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|374821126|gb|EHR85193.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|374825404|gb|EHR89340.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|374832800|gb|EHR96505.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|374834085|gb|EHR97745.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|383360492|gb|EID37887.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|394235345|gb|EJD80917.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|394240596|gb|EJD86019.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|394249674|gb|EJD94887.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|394263907|gb|EJE08628.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|394266236|gb|EJE10882.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|394271947|gb|EJE16426.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|394277971|gb|EJE22288.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|394279283|gb|EJE23591.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|394283931|gb|EJE28092.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|394290290|gb|EJE34154.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|394293180|gb|EJE36903.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|394297267|gb|EJE40870.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|394298947|gb|EJE42502.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|394303954|gb|EJE47364.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|406657425|gb|EKC83813.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|418614697|ref|ZP_13177659.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
gi|374819233|gb|EHR83361.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKAHRSLFW 344
>gi|242242821|ref|ZP_04797266.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|420174687|ref|ZP_14681135.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|420192300|ref|ZP_14698160.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
gi|242233722|gb|EES36034.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|394244591|gb|EJD89926.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|394261511|gb|EJE06308.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKAHRSLFW 344
>gi|420187246|ref|ZP_14693267.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
gi|394256225|gb|EJE01158.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYFFKTQRSLFW 344
>gi|420199483|ref|ZP_14705161.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
gi|394272265|gb|EJE16734.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F W
Sbjct: 329 ITLIGYYFKTHRSLFW 344
>gi|418606637|ref|ZP_13169907.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
gi|374407413|gb|EHQ78275.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
Length = 477
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|365902867|ref|ZP_09440690.1| membrane-associated serine protease [Lactobacillus malefermentans
KCTC 3548]
Length = 226
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ L + GA VS ++ Q WRL T +LH G HIL N ++L +G+++E+ FG R
Sbjct: 37 NTYVLIQFGA-KVSSLIQAGQWWRLFTPVFLHIGFEHILLNGITLYFLGLQIERIFGHWR 95
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW-TIYTNKHFLTLV 229
++++++ GG+L S +F +++S GAS A+FGL G+ L + W Y + T
Sbjct: 96 YFIIFVVTAIGGNLASFVFSPNSLSAGASTAIFGLFGAFLMLGESFWENPYIRQMTKTFA 155
Query: 230 VIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFV 262
+ I +NL +L P +D HIGG ++GFL+G+V
Sbjct: 156 LFIVLNLGFDLLSPGIDLSGHIGGLVAGFLIGYV 189
>gi|320102859|ref|YP_004178450.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319750141|gb|ADV61901.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 694
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
L P L G L +V + WR +T +LH G+ H+ N L V+G +E+ FG
Sbjct: 315 LHPDPEDLIAWGCLYGPRVALFDESWRALTMMFLHVGILHLAMNAWCLWVVGPLIERMFG 374
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT 227
+Y+I+G GG+ S + N+S GASGA+FGL+G++ + +++ +
Sbjct: 375 HGSFLAIYLIAGLGGATASLAWHPINLSAGASGAVFGLIGALGAA-----SLHRPQSIPP 429
Query: 228 LVV---------IIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVF 263
LV +A+NLA+G+ LP +DN AH+GG + GFL G +
Sbjct: 430 LVARTLSRAVWGFVALNLAIGLSLPMIDNAAHLGGLVCGFLAGAIL 475
>gi|322797669|gb|EFZ19678.1| hypothetical protein SINV_10168 [Solenopsis invicta]
Length = 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H++ +L + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 150 QFYRLFTTIFLHAGIVHLIITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 209
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L++I+ L +GILP +DN+A
Sbjct: 210 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRTLSKLILILLGLLVLGILPWIDNYA 269
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + + FG ++ RRK + ++W+ +++IVGL
Sbjct: 270 HLFGFIFGFLAAYALMPFISFGHYDR-----------RRKIL----LIWVC--LILIVGL 312
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
L+ L V + C C +CVP +R C ++
Sbjct: 313 FALLLALFYNVPVYE-CEVCKLFNCVPFTRDFCASQ 347
>gi|222099054|ref|YP_002533622.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
gi|221571444|gb|ACM22256.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
Length = 236
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 9/156 (5%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD +RLIT ++HGG+ HIL N +L G+ +E +G + Y +G G++ +
Sbjct: 50 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGSEKFLFSYFFTGVVGNIAT 109
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGILP-- 242
+F ISVGASGA+FGL+G + + T + K ++L+ II IN+ G LP
Sbjct: 110 HIFYHDTISVGASGAIFGLIGVLFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLPGT 169
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
+++N AH+GGF+SG LLG+ ++P F W +R AL
Sbjct: 170 NINNAAHLGGFLSGMLLGYT--MKP-FSW--KRRAL 200
>gi|322703522|gb|EFY95130.1| DHHC zinc finger membrane protein [Metarhizium anisopliae ARSEF 23]
Length = 513
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
+ ++ +Q +R I +LH G+ HI NML + + +E G +R L+Y+ +G
Sbjct: 264 NANQSPQPNQWFRFILPIFLHAGLIHIGFNMLLQMTLAKEMEMAIGSVRFFLVYLSAGIF 323
Query: 182 GSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAV 238
G ++ F + S GASG+LFG++ L +L +WT N K + +++ I I+ +
Sbjct: 324 GFVMGGNFAAPGVASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILDIVISFVL 383
Query: 239 GILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG-----YSALSRRKFMTYQ 293
G+LP +DNF+HIGGF+ G LG L P R + G YS ++ T
Sbjct: 384 GLLPGLDNFSHIGGFLMGLGLGICLLHSPN----ALRRRIDGSDNTSYSVVNSGSDDTAP 439
Query: 294 CIL-----------------WIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPT 336
L W+V +I + + +V+L C WC YLSC+P
Sbjct: 440 GFLKSPIGFFKGRKPLWWAWWLVRAGFLIAVIIVFIVLLSNFYKGTHTCGWCKYLSCLPV 499
Query: 337 SRW----SCRTEPA 346
S W + + +PA
Sbjct: 500 SNWCDIGTIQKQPA 513
>gi|15643350|ref|NP_228394.1| hypothetical protein TM0584 [Thermotoga maritima MSB8]
gi|418045242|ref|ZP_12683338.1| Rhomboid family protein [Thermotoga maritima MSB8]
gi|4981102|gb|AAD35669.1|AE001733_6 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678324|gb|EHA61471.1| Rhomboid family protein [Thermotoga maritima MSB8]
Length = 235
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 27/203 (13%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD +RLIT ++HGG+ HIL N +L G+ +E +G + + Y +G G+L +
Sbjct: 49 VDAGDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLAT 108
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGILP-- 242
+F ISVGASGA+FGL+G + + T + K ++L+ II IN+ G LP
Sbjct: 109 HVFYHDTISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLPGT 168
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLV 302
+++N AH+GGF+SG LLG+ F W RR LW V +
Sbjct: 169 NINNAAHLGGFLSGMLLGYT---MSPFSW-------------KRRT-------LWRVLAI 205
Query: 303 LVIVGLTLGLVMLLRGVDANDHC 325
V++ + L + L+R + D
Sbjct: 206 AVVLLVVLSYIFLIRQIPEIDEA 228
>gi|403237491|ref|ZP_10916077.1| rhomboid protein membrane-associated serine peptidase [Bacillus sp.
10403023]
Length = 515
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 90/153 (58%), Gaps = 11/153 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL K GA + ++++ + WR T LH G H+L N +L +G +E+ +G R
Sbjct: 206 NTETLLKYGAKENFRILNG-EWWRFFTPMILHIGFIHLLMNTFALYYLGTEVERLYGKSR 264
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL-- 228
++Y+ +GF GSL S +F +NIS GASGA+FG G++L T Y + F T+
Sbjct: 265 FLMIYVFAGFLGSLASFVF-NANISAGASGAIFGCFGALL----FFGTAYPSLFFRTMGP 319
Query: 229 --VVIIAINLAVG-ILPHVDNFAHIGGFISGFL 258
+ II INL +G ++P +DN HIGG + GFL
Sbjct: 320 NVIGIIIINLVLGFMIPGIDNSGHIGGLVGGFL 352
>gi|238854484|ref|ZP_04644823.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313471846|ref|ZP_07812338.1| rhomboid family protein [Lactobacillus jensenii 1153]
gi|238832911|gb|EEQ25209.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313449012|gb|EEQ68240.2| rhomboid family protein [Lactobacillus jensenii 1153]
Length = 229
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 78 YVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLIT 137
Y N N++ V + F + + S L K+GA ++ Q WRL T
Sbjct: 10 YKTNAMTNTIFVV--LVAMFIIETLRGGS---DESAVLFKLGAQFNPAIIILGQWWRLFT 64
Query: 138 CNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS-ALFIQSNISV 196
+LH G+ H++ N ++L +G LE G +R ++Y+++G GG+L++ AL + +S
Sbjct: 65 AQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVRFLIIYLLAGVGGNLMTLALGSDNAVSA 124
Query: 197 GASGALFGLLGSMLSELITNWT----IYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
GAS ALFGL G+M++ I N T Y + L V INL I +P +D + H+G
Sbjct: 125 GASTALFGLFGAMIALGIANRTHEGMAYLGRQSFVLAV---INLLFDINIPQIDTWGHVG 181
Query: 252 GFISGFLL 259
G ++GFLL
Sbjct: 182 GLLAGFLL 189
>gi|212638734|ref|YP_002315254.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
gi|212560214|gb|ACJ33269.1| Serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
Length = 517
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+++TL + GA + ++ + + WR T LH G H+ N +L +G +E+ +G +R
Sbjct: 213 NTLTLIQYGA-KFNPLILQGEWWRFFTPIVLHIGFVHLFMNTFALYYLGPLVEKLYGSLR 271
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y+ +GF GSL S LF S +S GASGA+FG G++L I+ + ++
Sbjct: 272 FLFIYLFAGFAGSLASFLFSPS-VSAGASGAIFGCFGALLYFGKAKPHIFFRTIGMNVIT 330
Query: 231 IIAINLAVG-ILPHVDNFAHIGGFISGFL 258
+I INLA G ++P++DN HIGG I GFL
Sbjct: 331 VIGINLAFGLVVPNIDNAGHIGGLIGGFL 359
>gi|160874113|ref|YP_001553429.1| rhomboid family protein [Shewanella baltica OS195]
gi|378707356|ref|YP_005272250.1| rhomboid family protein [Shewanella baltica OS678]
gi|418024255|ref|ZP_12663238.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
gi|160859635|gb|ABX48169.1| Rhomboid family protein [Shewanella baltica OS195]
gi|315266345|gb|ADT93198.1| Rhomboid family protein [Shewanella baltica OS678]
gi|353536215|gb|EHC05774.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
Length = 541
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 18/168 (10%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRLIT ++HGG+ H+ N+ L +G LE G R+ L Y+I+G S+ S + +
Sbjct: 376 WRLITSTFIHGGLAHLALNLYGLFFVGSFLEPVLGKWRLFLAYLITGILASIASICWYDA 435
Query: 193 NISVGASGALFGLLG--------SMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHV 244
+SVGASGA+ GLLG + E I NW + N L + I+L G+L V
Sbjct: 436 TVSVGASGAIMGLLGILVIWAWKKIFPEDI-NWILSIN-----LAFFVTISLVAGLLGGV 489
Query: 245 DNFAHIGGFISGFLLGFV---FLIRPQFGWVEQR-YALSGYSALSRRK 288
DN AH+GG +SG ++G++ + R Q QR + G+S +RK
Sbjct: 490 DNAAHVGGLLSGLVVGYLSLRYAQRAQGDRGAQRARKIEGHSPAKKRK 537
>gi|91776194|ref|YP_545950.1| rhomboid-like protein [Methylobacillus flagellatus KT]
gi|91710181|gb|ABE50109.1| Rhomboid-like protein [Methylobacillus flagellatus KT]
Length = 356
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++V LQ + + WRL T +LH G H+ NM++ G +E+ +G
Sbjct: 50 PNNVQLQLAWGANFGPATQDGEWWRLFTALFLHFGAVHLALNMIAFWDGGQLVERMYGHW 109
Query: 170 RVGLLYIISGFGGSLLSALFIQSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFLT 227
R ++Y++SG G+LLS L Q N +S GASGA+FG+ G+++ L + + F
Sbjct: 110 RYLVIYLVSGLVGNLLS-LVWQGNQAVSGGASGAIFGIYGALIVFLWQERALLDRREFRW 168
Query: 228 LV----VIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFVFL--IRPQ 268
L V +A+G ++P +DN AHIGGF++G L G + + +RPQ
Sbjct: 169 LFGGACVFATATIALGFMIPAIDNAAHIGGFVAGMLAGLLLMRGLRPQ 216
>gi|443326975|ref|ZP_21055612.1| putative membrane protein [Xenococcus sp. PCC 7305]
gi|442793404|gb|ELS02854.1| putative membrane protein [Xenococcus sp. PCC 7305]
Length = 203
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 97/166 (58%), Gaps = 12/166 (7%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL ++GAL VS+ + + + WRLI N+LH G FH+++NML+L IG +E G R +
Sbjct: 37 TLYRLGAL-VSENIKQGEWWRLINANFLHFGWFHLISNMLALFFIGSIVELSIGVERYLI 95
Query: 174 LYIISGFGGSLLSALFIQSN-----ISVGASGALFGLLGSMLSELITNWTIYTN----KH 224
+Y++SG G L AL + +GAS A+ G +G+ML+ + +W Y K
Sbjct: 96 VYLLSGTGSMLTFALLANYTGQVQVVLMGASAAIMGTIGTMLTTSLADWLEYRTSLKAKR 155
Query: 225 FLTLVVIIAINLAV-GILPHVDNFAHIGGFISGFLLGFVFLIRPQF 269
T++ ++ + + I+P+V ++H+ GFI GF++ + L+R +F
Sbjct: 156 LQTVIFVVVLQFILDNIIPNVSFYSHLFGFIIGFVVSLI-LMRWKF 200
>gi|205374009|ref|ZP_03226809.1| hypothetical protein Bcoam_12572 [Bacillus coahuilensis m4-4]
Length = 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR IT +LH G FH+L N +L++IG +E+ FG R +Y+++G G + S F
Sbjct: 227 WRFITPIFLHIGFFHLLMNTFALVLIGREVEKIFGKWRFLFIYLLAGIIGCIASFYFNPV 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
+S GASGA+FG G++L T ++ + ++VI+ +NL +G +P +DN HIG
Sbjct: 287 GLSAGASGAIFGCFGALLYFGYTFPQVFFRTMGMNILVIVGLNLVLGFTVPGIDNAGHIG 346
Query: 252 GFISGFL-LGFVFLIRPQFGWVEQRYALSG 280
G + GF+ G V+ P+ V Q Y ++G
Sbjct: 347 GLVGGFIATGIVYF--PRKKSVSQLYYVTG 374
>gi|260103121|ref|ZP_05753358.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083068|gb|EEW67188.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 227
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 9/155 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L KMGA++ VV HQ WRL +LH GV H+++N + + +G +E G R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHFRFLV 97
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN----WTIYTNKHFLTL 228
Y+++G GG+L S F +S GAS ALFGL G+M++ + N + + L L
Sbjct: 98 TYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALVL 157
Query: 229 VVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ INLA+ I +P +D + HIGG I+GFLL +
Sbjct: 158 AL---INLALDIFVPGIDIWGHIGGLITGFLLAII 189
>gi|300812773|ref|ZP_07093172.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313124161|ref|YP_004034420.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422844075|ref|ZP_16890785.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|300496246|gb|EFK31369.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312280724|gb|ADQ61443.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325685831|gb|EGD27902.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 223
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L KMGA+ VV + Q WRL T +LH G+ HI +N + + IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKH 224
R L+Y++SG GGSLL+ F IS GAS ALFGL G+M + + +
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCTGFKDKDNTLLSFLGRQ 150
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVF 263
L L V INL + + +P VD H+GG I+G LL +
Sbjct: 151 ALALAV---INLVLDVFMPDVDILGHVGGLITGALLAVIL 187
>gi|197302289|ref|ZP_03167348.1| hypothetical protein RUMLAC_01016 [Ruminococcus lactaris ATCC
29176]
gi|197298720|gb|EDY33261.1| peptidase, S54 family [Ruminococcus lactaris ATCC 29176]
Length = 211
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ +++ + +R TC +LH G+ H+L NM+ L +G +LE G ++ L+Y IS
Sbjct: 40 GAMYEPMILENQEYYRFFTCMFLHFGIQHLLNNMVMLGALGWQLEPVIGKVKYLLIYFIS 99
Query: 179 GFGGSLLS----ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G GGS LS + + ++S GASGA+FGL+G++L +I N + +++++ +
Sbjct: 100 GLGGSGLSFAWNVMHEEQSVSAGASGAIFGLMGALLYVVIANRGRLGDLSGKGMMLMVLL 159
Query: 235 NLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
L G+ VDN AHIGG + GF+L + + +
Sbjct: 160 GLYCGMTSTGVDNLAHIGGLVCGFILALILYRKKK 194
>gi|414867423|tpg|DAA45980.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 139
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 38 QGVSAPPPA--VYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSV-------- 87
G +PPP +Y + ++WV WL+P V NI +F + MYVNNCP ++
Sbjct: 17 DGKPSPPPPGHLYPQRDGEREWVPWLVPLVVAVNIVLFAVAMYVNNCPAHAASSRRGGAG 76
Query: 88 SCVAR-FLGRFSFQPFKENPLLGPSSVT 114
SCVAR FL RFSFQP ENPLLGPSS T
Sbjct: 77 SCVARGFLHRFSFQPLSENPLLGPSSAT 104
>gi|418029655|ref|ZP_12668189.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689534|gb|EHE89520.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 209
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 99 FQPFKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F +G S T L KMGA+ VV + Q WRL T +LH G+ HI +N + +
Sbjct: 4 FAVFLVETFMGGSESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIY 63
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LS 211
IG E FG R L+Y++SG GGSLL+ F IS GAS ALFGL G+M
Sbjct: 64 YIGQYAEPVFGHWRFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFK 123
Query: 212 ELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
+ + + L L V INL + + +P VD H+GG I+G LL +
Sbjct: 124 DKDNTLLSFLGRQALALAV---INLVLDVFMPDVDILGHLGGLITGALLAVI 172
>gi|301300052|ref|ZP_07206273.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852350|gb|EFK80013.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 220
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
V L + GA S + Q WRLIT ++H G+ H+L NM++L +G LE FG R
Sbjct: 36 VNLVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLENIFGKTRFL 94
Query: 173 LLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTL 228
++Y++SG G++ S F S+IS GAS ALFG+ GS ML E + ++ F L
Sbjct: 95 IIYLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLL 154
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
V+ +N+ G+ + D H+GG +SGFLLG+V
Sbjct: 155 VI---LNIFFGMFGNSDLAGHLGGLVSGFLLGYV 185
>gi|425778005|gb|EKV16152.1| Rhomboid family membrane protein [Penicillium digitatum Pd1]
gi|425780641|gb|EKV18647.1| Rhomboid family membrane protein [Penicillium digitatum PHI26]
Length = 507
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 46/256 (17%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R I ++HGG HI N+ + +G +E+ G R + Y SG G +L +
Sbjct: 245 NQWYRFIIPIFMHGGFIHIGFNLWVQVTMGADMERMVGMWRYTVTYFASGIFGFVLGGNY 304
Query: 190 I-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDN 246
Q N S G SGALFG+L L +L+ +W + + +++ + ++ +G+LP +DN
Sbjct: 305 AAQLNPSDGCSGALFGILALFLLDLLYDWPQRESPWVELIIMLLGVGVSFVLGLLPGLDN 364
Query: 247 FAHIGGFISGFLLGFVFL-----IRPQFGWVEQRY-ALSGYSA--------------LSR 286
F+HIGGFI G +G + +R + G Q Y A+SG +
Sbjct: 365 FSHIGGFIMGLAIGLTIMRSPNALRERIGLARQPYVAMSGGAGQVGPEQKTTSVTDFFKG 424
Query: 287 RKFMTYQCI---------------------LWIVSLVLVIVGLTLGLVMLLRGV--DAND 323
++ +T LW V +V + +G +ML+ +
Sbjct: 425 KRGLTSNSTETPGSTKGPLYFFKGRKPLWWLWWVVRAGALVAVLVGFIMLIVNFYKYPSS 484
Query: 324 HCSWCHYLSCVPTSRW 339
CSWC+ LSC+P + W
Sbjct: 485 DCSWCYRLSCMPVNGW 500
>gi|366053016|ref|ZP_09450738.1| membrane-associated serine protease [Lactobacillus suebicus KCTC
3549]
Length = 223
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 96/161 (59%), Gaps = 10/161 (6%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA V ++ + Q WRLIT +LH G+ H++ N +++ IG ++E FG R +
Sbjct: 39 LIEFGA-KVGTLIQEGQWWRLITPVFLHIGLMHLVVNSVTVYYIGTQIENMFGHARFLSI 97
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTLVV 230
Y +S G+L S +F+ +++S GAS A+FGL G+ ML E + + ++ FLT V
Sbjct: 98 YFVSALTGNLASFVFLPNSLSAGASTAIFGLFGAFLMLGESFHHNPYIRLLSRQFLTFV- 156
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFG 270
AINL + +P +D + H+GG + GFL+G+V + PQ G
Sbjct: 157 --AINLVFDLFMPGIDIYGHLGGLVGGFLMGYV-VGTPQIG 194
>gi|331092038|ref|ZP_08340869.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402239|gb|EGG81810.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 203
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ V V+ H+ +RLIT +LH G H++ NM+ L +G LE+E G + LLY +S
Sbjct: 40 GAMFVPLVLGNHEYYRLITSIFLHFGFAHLMNNMVMLFFLGSILEEEIGSFKYLLLYFVS 99
Query: 179 GFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL-----V 229
G G++LSA IS GASGA+FG++G++L + N + H TL V
Sbjct: 100 GVAGNILSAFMDLKTGEFVISAGASGAIFGVIGALLIIVTKN-----HGHLRTLDGRGMV 154
Query: 230 VIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
++ +L G VDN AHIGG +SG LL F+ + Q
Sbjct: 155 FMVVCSLYHGFTSTGVDNMAHIGGLLSGILLAFILYRKRQ 194
>gi|242013654|ref|XP_002427517.1| rhomboid, putative [Pediculus humanus corporis]
gi|212511919|gb|EEB14779.1| rhomboid, putative [Pediculus humanus corporis]
Length = 576
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 66/379 (17%)
Query: 11 QIKVNSKGGGGSGSGN----TVHPVEEMDRPQGVS-------APPPAVYG-EIKHSKKWV 58
Q +++S+ GG GS + TVHP+ E P S P G E+ S+
Sbjct: 199 QDEIDSRAGGDFGSSSNQALTVHPIREAQIPSRSSNQSWQRGRDSPGTAGPEVGSSRIDS 258
Query: 59 TWLIPCFVVAN---IAMFVITMYVNNCPKNSVSCVARFLGRFS----FQPFKENPL---- 107
+L F +N M ++ K SVS AR + ++P+ +
Sbjct: 259 NFLGRAFDNSNRRQYGMGILGRLFGRKMKKSVSNQARIKEQLDDLDDYRPYFTYWVTTVQ 318
Query: 108 ------------LGPSSVTLQKMGAL-----DVSKVV------DKHQGWRLITCNWLHGG 144
GP + L + L DV ++ Q +RL T +LH G
Sbjct: 319 VVILFISLFTYGFGPPGIDLNRRSGLVSCLDDVCGMIPFYVPDHPDQFYRLWTSLFLHAG 378
Query: 145 VFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFG 204
+ H+ +L L + LE+ G +R+G++Y+ SG G+L SA+F+ VG +G+ FG
Sbjct: 379 IVHMAVTLLIQLSLMRDLEKLTGPLRIGIIYLGSGVAGNLASAIFVPYRAEVGPAGSQFG 438
Query: 205 LLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
LL ++ E++ W + + L+ I+ + G+LP +DN+AH GF+ GFLL +
Sbjct: 439 LLACLVVEVLNVWPMLQRPENALMKLLGIVLVLFLFGLLPWIDNYAHFFGFVFGFLLSYA 498
Query: 263 FLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDAN 322
FL FG R K +T ++WI L G+ G +++L +
Sbjct: 499 FLPFVSFG------------PYDRTKKVT---LIWI---CLFSAGIVFGALVVLFYIVPI 540
Query: 323 DHCSWCHYLSCVPTSRWSC 341
C C+Y +C+P +R C
Sbjct: 541 YECQVCNYFNCIPLTRDFC 559
>gi|373859031|ref|ZP_09601763.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
gi|372451122|gb|EHP24601.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
Length = 522
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+S TL K GA + ++ + Q WR +T ++H G H++ N ++L IG +E+ +G R
Sbjct: 207 NSTTLIKFGA-KFNPLIIEGQWWRFLTPIFIHIGFLHLIMNSIALYYIGPLVERIYGNFR 265
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
L+Y+ +GF G L S F +N+S GASGA+FG G++L + ++ + ++V
Sbjct: 266 FILIYLFAGFTGVLASFAF-SANLSAGASGAIFGCFGALLYFGLIYPKLFFRTMGMNILV 324
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
+I +NLA G + +DN HIGG I GFL
Sbjct: 325 VIGLNLAFGFSMQGIDNAGHIGGLIGGFL 353
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L MGA + ++ + + WRLIT +LH + HI NM +L G+ LE+ +G R LL
Sbjct: 65 LLAMGA-KSNTLIQQGEFWRLITPMFLHVSLPHIAFNMYALYAFGVSLERHYGRRRFLLL 123
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL---VVI 231
Y I G GG +LS L N S GAS ALFG++ + L N + + L V I
Sbjct: 124 YFIGGLGGVVLSYLLSPEN-SAGASTALFGVVAAEAVFLYYNRRWFGKEAVSALWNTVFI 182
Query: 232 IAINLAVGILPHVDNFAHIGGFISG 256
I INL +G+ P +DN+ H+GG I+G
Sbjct: 183 IGINLVLGLSPGIDNWGHLGGLIAG 207
>gi|195998740|ref|XP_002109238.1| hypothetical protein TRIADDRAFT_21455 [Trichoplax adhaerens]
gi|190587362|gb|EDV27404.1| hypothetical protein TRIADDRAFT_21455 [Trichoplax adhaerens]
Length = 547
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 22/215 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R +LH G+ H+ +L L+I E+ G++R+ ++Y++SG GG+++S + +
Sbjct: 343 QFYRFWISLFLHAGLLHLGVTLLFNLIILKDFEKMAGWLRISIIYVLSGIGGNIISGILL 402
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
+ +G SG+ FG++ + E+ +W I + L VI+ + G+LP+VDNF+
Sbjct: 403 PYHPEIGPSGSNFGIVACLFVEVFQSWQILKRPVRAIGKLAVIVLVLFIFGLLPYVDNFS 462
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H GGFI G L F L FG ++R R++ L I+ + ++ GL
Sbjct: 463 HFGGFIFGLFLAFAILPYVSFGKWDRR----------RKR-------LQIIISIFIVGGL 505
Query: 309 TLGLVMLL-RGVDANDHCSWCHYLSCVPTSRWSCR 342
++ + RG C C YL+C+P + C+
Sbjct: 506 FCAILFIFYRGRPF--ECKVCRYLNCIPFTDHFCK 538
>gi|345100279|gb|AEN69415.1| rhomboid-like protease 4 [Eimeria tenella]
Length = 558
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+S L G L+ + + + + +R+ + +LHGG HI N+L + LE ++GF
Sbjct: 236 PNSRILTAFGGLETNYIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEPDWGFW 295
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLT 227
R LL+ + G G+LLSA+ NI+VG+SGA++ L+G+++ + W +
Sbjct: 296 RTALLFFVGGISGNLLSAVADPCNITVGSSGAMYSLMGALIPYCVEYWKTIPRPCCILMF 355
Query: 228 LVVIIAINLAVGILPHVDNFAHI 250
+V++ I + G+ DN+AHI
Sbjct: 356 FIVVLLIGIVTGLSGFTDNYAHI 378
>gi|418621400|ref|ZP_13184176.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
gi|374829344|gb|EHR93148.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
Length = 394
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|260817587|ref|XP_002603667.1| hypothetical protein BRAFLDRAFT_128681 [Branchiostoma floridae]
gi|229288989|gb|EEN59678.1| hypothetical protein BRAFLDRAFT_128681 [Branchiostoma floridae]
Length = 531
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS---- 186
Q WR + WLH G+ H+L + ++G+R+E+ G +R+ ++Y+I G GG+L+
Sbjct: 310 QWWRWLLSPWLHAGLIHLLLVVTVQCIVGVRIERMVGGVRLAIIYLICGAGGNLMKNIYL 369
Query: 187 ---------------ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLV 229
A+F +G + A GLLG EL+ W + LTL+
Sbjct: 370 TVSTKSFLLNPMQTGAVFSPYTPQMGGAAAACGLLGCACVELLQAWRLVPRALCKLLTLL 429
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKF 289
++ + G LP VDN+A +GGF+ G L VFL Y L R
Sbjct: 430 TVLTVLFMAGTLPLVDNWAQLGGFVFGLLSALVFL---------------PYIVLGRWDA 474
Query: 290 MTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
+C +V L V++ L +++++ D C C + +C+P + +C
Sbjct: 475 RRKRC---LVVLGFVMLVLMYAVLLMMFYYVQGDFCPACKHFNCIPYTTDAC 523
>gi|182418411|ref|ZP_02949705.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237666444|ref|ZP_04526429.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377793|gb|EDT75337.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237657643|gb|EEP55198.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 354
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 10/187 (5%)
Query: 66 VVANIAMFVITMYV--NNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDV 123
+ N+ MF+IT Y+ +N N++S S ++ S++ L +GA
Sbjct: 151 IAINVIMFLITSYMIYSNLNDNAISW------GISVNSIPDSVKNRVSNLVLIFLGA-KY 203
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGS 183
S ++ + WRLI+C +LHG HI NM L +IG ++E+ +G ++ +Y+IS S
Sbjct: 204 SPLIYDGEIWRLISCAFLHGSFLHIACNMYMLYIIGPQIERIYGKVKYIFIYLISCITSS 263
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILP 242
LS + +ISVGASG +FGL+G++L+ + ++ + L+ I INL +G I+
Sbjct: 264 TLSLIINPDSISVGASGGIFGLMGALLAFALIERKNIDREYTVGLIKTIGINLVIGLIII 323
Query: 243 HVDNFAH 249
++DN AH
Sbjct: 324 NIDNAAH 330
>gi|153811275|ref|ZP_01963943.1| hypothetical protein RUMOBE_01667 [Ruminococcus obeum ATCC 29174]
gi|149832773|gb|EDM87857.1| peptidase, S54 family [Ruminococcus obeum ATCC 29174]
Length = 163
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA ++ + +RL TC +LH G+ H+L NML L V+G RLEQ G I+ L+Y+I
Sbjct: 7 GAAFTPMIIQGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLEQVIGKIKFLLIYLIG 66
Query: 179 GFGG---SLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G G SLL L Q +S GASGA+F ++G+M+ +I N + ++V+ A
Sbjct: 67 GVFGNVISLLIELRTQDFAVSAGASGAVFAVMGAMIYIVIRNKGWLGDLSMRQILVMAAF 126
Query: 235 NLAVGILPH-VDNFAHIGGFISGFLLGFVF 263
+L G VDN AH+GG +SGF L +F
Sbjct: 127 SLYFGFASTGVDNTAHVGGMVSGFFLAVIF 156
>gi|374313630|ref|YP_005060060.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
gi|358755640|gb|AEU39030.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
Length = 225
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 14/171 (8%)
Query: 111 SSVTLQKMGALDVSK--------VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
S V+ + ALDV+ V HQ WRL+T +LH G+ HI NM L IG +
Sbjct: 41 SGVSFTEPTALDVANWGGDFGPLTVGAHQWWRLLTSCFLHFGIIHIGFNMYVLFQIGPFI 100
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT---- 218
E FG IR L+Y +G GGSL+S + GASGA+FGL G++ L+ N
Sbjct: 101 EMAFGRIRYLLIYFFAGLGGSLVSVWVHPMVVGAGASGAIFGLYGAVFGFLLRNRRSLDP 160
Query: 219 IYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
T + + + N+ G I D AH GG ++GF++G + LIRP+
Sbjct: 161 AVTKSIAKSAGIFVLYNVVYGSITRTTDLSAHFGGLVTGFVVG-MLLIRPR 210
>gi|426201783|gb|EKV51706.1| hypothetical protein AGABI2DRAFT_62207 [Agaricus bisporus var.
bisporus H97]
Length = 377
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ Q +R IT +LH G+ H L NML + ++E+E G + Y +G G++L
Sbjct: 147 EPSQWFRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFAAGIFGNVLGG 206
Query: 188 LFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHV 244
F I SVGASGA+ G L +LI +W + + + + + + I++A+G +P
Sbjct: 207 NFALVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLISIAIGYIP-C 265
Query: 245 DNF----------AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
+F AHIGGF+ G L+G VF Y +S K ++
Sbjct: 266 KSFSSCPYSPCLLAHIGGFVMGLLVGIVF-----------------YPIISVTK--RHRI 306
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
I W L + + + L V+L R +D C+ C YLSC+PTS
Sbjct: 307 ISWTFKLAAIPLAVIL-FVVLTRNFYTSDPYAACTGCRYLSCIPTS 351
>gi|420216660|ref|ZP_14721861.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
gi|394291537|gb|EJE35341.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
Length = 326
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 13 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 57
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 58 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 117
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 118 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 168
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 169 ITLIGYYFKTQRSLFW 184
>gi|104774327|ref|YP_619307.1| hypothetical protein Ldb1479 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423408|emb|CAI98279.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 215
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L KMGA+ VV + Q WRL T +LH G+ HI +N + + IG E FG
Sbjct: 23 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKH 224
R L+Y++SG GGSLL+ F IS GAS ALFGL G+M + + +
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 142
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
L L V INL + + +P VD H+GG I+G LL +
Sbjct: 143 ALALAV---INLVLDVFMPDVDILGHVGGLITGALLAVI 178
>gi|309792360|ref|ZP_07686828.1| Rhomboid family protein [Oscillochloris trichoides DG-6]
gi|308225581|gb|EFO79341.1| Rhomboid family protein [Oscillochloris trichoides DG6]
Length = 240
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
L P L +GA V++++ WRL++ +LHG + HIL N +L +G E+ +G
Sbjct: 38 LQPRLSVLVFLGA-KVNELIAAGAYWRLLSATFLHGSLIHILFNGYALYALGPETERIYG 96
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN---KH 224
R LY ++G GGSL S L + ++SVGASGA+FGL+G + N + N
Sbjct: 97 TRRFLALYFLAGLGGSLASYL-LSPSVSVGASGAIFGLIGGLGIFYYLNRAVLGNFGKAQ 155
Query: 225 FLTLVVIIAINLAVGI-LPH-VDNFAHIGGFISGFLLGFV----FLIRPQFGWVEQRYAL 278
+ + INL +G P +DN+ H+GG + G + G+ F++ P F
Sbjct: 156 VQNMATVALINLFIGFSAPSIIDNWGHLGGLVGGIVAGWALAPRFMVDPGF--------- 206
Query: 279 SGYSALSRRKFMTYQCILWIVSLVLVIV 306
Y L RR + Q +W V+LVLV++
Sbjct: 207 --YPPLMRRTYPA-QGWMWAVALVLVML 231
>gi|315658175|ref|ZP_07911047.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
gi|315496504|gb|EFU84827.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
Length = 489
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 11/157 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S++ L +MG L VV H W RLIT +LH HIL NMLSL + G +E G +
Sbjct: 185 SNIKLLEMGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPM 242
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----F 225
++ +LYIISG G+ LS F +S GASGA+FGL+G++++ +I + +Y+ K
Sbjct: 243 KMLILYIISGLFGNFLSLSFNTDTVSAGASGAIFGLIGAIIAMMIIS-KVYSRKMIGQLL 301
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ LV++I +L +L +V+ AH+GGFISG LL ++
Sbjct: 302 IALVILIGFSL---LLSNVNIMAHLGGFISGLLLIYI 335
>gi|295085069|emb|CBK66592.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Bacteroides xylanisolvens XB1A]
Length = 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|15613984|ref|NP_242287.1| hypothetical protein BH1421 [Bacillus halodurans C-125]
gi|10174038|dbj|BAB05140.1| BH1421 [Bacillus halodurans C-125]
Length = 514
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRL++ +LH G+ H + N L+L +G +E+ +G R ++Y I+G GS+ S + +
Sbjct: 232 WRLLSSMFLHIGILHFMMNSLALFYLGGTVERIYGTSRFFIIYFIAGLAGSIAS-FALNA 290
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIG 251
++S GASGA+FG G++L + ++ ++++I+ NLA G I+P +DN AHIG
Sbjct: 291 HVSAGASGAIFGCFGALLYFGTVHKKLFFRTMGSSVLLILVFNLAFGFIIPMIDNGAHIG 350
Query: 252 GFISGFL 258
G I GFL
Sbjct: 351 GLIGGFL 357
>gi|298480750|ref|ZP_06998946.1| S54 family peptidase [Bacteroides sp. D22]
gi|298273184|gb|EFI14749.1| S54 family peptidase [Bacteroides sp. D22]
Length = 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|336406188|ref|ZP_08586849.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
gi|335935437|gb|EGM97389.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
Length = 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|255690223|ref|ZP_05413898.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
gi|260624242|gb|EEX47113.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
Length = 584
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LHGG+ H+L NM +L ++G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+G+ + ++D AH GGFI+G +LG F
Sbjct: 307 FIGLSMSNIDISAHFGGFIAGAILGLFF 334
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LHGG+ H+L NM +L ++G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+G+ + ++D AH GGFI+G +LG F
Sbjct: 307 FIGLSMSNIDISAHFGGFIAGAILGLFF 334
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LHGG+ H+L NM +L ++G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+G+ + ++D AH GGFI+G +LG F
Sbjct: 307 FIGLSMSNIDISAHFGGFIAGAILGLFF 334
>gi|418605748|ref|ZP_13169055.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|420220495|ref|ZP_14725454.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|420232065|ref|ZP_14736707.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
gi|374401451|gb|EHQ72524.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|394285848|gb|EJE29914.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|394301787|gb|EJE45241.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
Length = 486
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASG +FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGTIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|392553138|ref|ZP_10300275.1| rhomboid-like protein [Pseudoalteromonas spongiae UST010723-006]
Length = 360
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 45 PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKE 104
P Y SK WV W + NI +F A F SF E
Sbjct: 140 PVEYNLKTKSKPWVNW---SLIAINILIFC----------------AYFFNIESFGFVLE 180
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
N L P+ V + + W L+TC +LHG V H++ NM L +IG LE
Sbjct: 181 NFALRPADVN-------------NGQEIWTLLTCVFLHGSVMHLVGNMYFLYIIGDNLED 227
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQS-NI-SVGASGALFGLLGSML-----SELITNW 217
G + + Y+I G G SL S + Q NI SVGASGA+ GL G L + L +
Sbjct: 228 ALGHKKYLMYYLICGIGASLFSLVMSQDPNIPSVGASGAIAGLFGMYLMWFRHASLTFMF 287
Query: 218 TIYTNKHFLTLVVIIAINLAVGIL------PHVDNFAHIGGFISGFLLGF 261
IY K L+ V AI +A+ I VD AHIGGF+ G ++G+
Sbjct: 288 VIYQKK--LSAVWFFAIWIAINIFGLIVLQDGVDYGAHIGGFVVGLVIGY 335
>gi|84994850|ref|XP_952147.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302308|emb|CAI74415.1| hypothetical protein, conserved [Theileria annulata]
Length = 606
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
G L+ + + + + +RL ++H GV H+L N+LS + I +E ++GFIR LLY I
Sbjct: 200 FGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQILWIIEPDWGFIRTFLLYFI 259
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELIT--NWTI---------------- 219
SG G S+ SA I++G+SGAL+GL G +L +I N TI
Sbjct: 260 SGLGSSITSASLDPCFITIGSSGALYGLYGGLLPYIIVLGNITISNFLDNFPHYFHCKNF 319
Query: 220 YTNKHFLTLVVIIA-INLAVGILPHVDNFAHIGGFISGFLLGF 261
YT + ++ +I I + +G ++DN+AH+GG I G L GF
Sbjct: 320 YTIRQLDYIIKLIGIIGVLMGFTQNIDNYAHLGGCIFGLLWGF 362
>gi|302384591|ref|YP_003820413.1| rhomboid family protein [Clostridium saccharolyticum WM1]
gi|302195219|gb|ADL02790.1| Rhomboid family protein [Clostridium saccharolyticum WM1]
Length = 206
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 108 LGPSSVTLQKM---GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
+ S+V Q M GA+ V+++ + +RL+T ++H G+ HI+ NML L ++G LE+
Sbjct: 29 MAGSTVNTQFMVNHGAMYAPLVLEEGEYFRLLTSVFMHFGINHIMNNMLILFILGDNLER 88
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF----IQSNISVGASGALFGLLGSMLSELITNWTIY 220
G I+ L Y++ G G +++S + +S +S GASGA+FG++G +L + N
Sbjct: 89 ALGHIKYLLFYLLCGVGANVISIILNLGDYRSVVSAGASGAIFGVIGGLLYAVFINRGRL 148
Query: 221 TNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+ L+++IA +L G VDN AHIGG G +LG + +P+
Sbjct: 149 EDLSARQLIIMIACSLYFGFTSTGVDNAAHIGGLFFGIVLGILLYRKPR 197
>gi|227890613|ref|ZP_04008418.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|417788071|ref|ZP_12435754.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|417810486|ref|ZP_12457165.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|418961160|ref|ZP_13513047.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
gi|227867551|gb|EEJ74972.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|334308248|gb|EGL99234.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|335349282|gb|EGM50782.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|380344827|gb|EIA33173.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
Length = 220
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA S + Q WRLIT ++H G+ H+L NM++L +G LE FG R ++
Sbjct: 38 LVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLENIFGKTRFLII 96
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTLVV 230
Y++SG G++ S F S+IS GAS ALFG+ GS ML E + ++ F LV+
Sbjct: 97 YLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLLVI 156
Query: 231 IIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+N+ G+ + D H+GG +SGFLLG+V
Sbjct: 157 ---LNIFFGMFGNSDLTGHLGGLVSGFLLGYV 185
>gi|418325502|ref|ZP_12936708.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
gi|365228104|gb|EHM69289.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
Length = 486
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + L V+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALFVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|167520161|ref|XP_001744420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777506|gb|EDQ91123.1| predicted protein [Monosiga brevicollis MX1]
Length = 217
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
+ I +E+ G++R+ +Y +SG GG L ALF + V G G+ G M EL +W
Sbjct: 43 VAIDIEKLAGWLRMFFIYSLSGLGGWLTGALFTPYQVCVCYLGNREGMCGGMFVELFQSW 102
Query: 218 TIYTN--KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
+ + L I + A G LP++DN++H+GGF G L VFL FG +
Sbjct: 103 PLLARPWREVFKLTFIALVAFAFGFLPYLDNWSHLGGFTFGVLSSIVFLPYITFGKWDA- 161
Query: 276 YALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCV 334
+R++ + + C+ IV L+ V++ L D D CSWCHYL+C+
Sbjct: 162 ---------ARKRTLIFICLPGIVVLMTVLLSLFF--------TDTVD-CSWCHYLNCI 202
>gi|289550680|ref|YP_003471584.1| membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|385784306|ref|YP_005760479.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|418413982|ref|ZP_12987198.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180212|gb|ADC87457.1| Putative membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|339894562|emb|CCB53844.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|410877620|gb|EKS25512.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 485
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 11/157 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S++ L MG L VV H W RLIT +LH HIL NMLSL + G +E G +
Sbjct: 181 SNIKLLDMGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPM 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH----F 225
++ +LYIISG G+ LS F +S GASGA+FGL+G++++ +I + +Y+ K
Sbjct: 239 KMLILYIISGLFGNFLSLSFNTDTVSAGASGAIFGLIGAIIAMMIIS-KVYSRKMIGQLL 297
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ LV++I +L +L +V+ AH+GGFISG LL ++
Sbjct: 298 IALVILIGFSL---LLSNVNIMAHLGGFISGLLLIYI 331
>gi|90961526|ref|YP_535442.1| rhomboid family integral membrane protein [Lactobacillus salivarius
UCC118]
gi|385840241|ref|YP_005863565.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
gi|90820720|gb|ABD99359.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius UCC118]
gi|300214362|gb|ADJ78778.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
Length = 220
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA S + Q WRLIT ++H G+ H+L NM++L +G LE FG R ++
Sbjct: 38 LVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLENIFGKTRFLII 96
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTLVV 230
Y++SG G++ S F S+IS GAS ALFG+ GS ML E + ++ F LV+
Sbjct: 97 YLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQTMSRQFFLLVI 156
Query: 231 IIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+N+ G+ + D H+GG +SGFLLG+V
Sbjct: 157 ---LNIFFGMFGNSDLAGHLGGLVSGFLLGYV 185
>gi|420184523|ref|ZP_14690632.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
gi|394257174|gb|EJE02096.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
Length = 486
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + L V+I +L + +++ AH+GGFISG
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALFVLIVFSL---FMSNINIMAHLGGFISGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|260665468|ref|ZP_05866315.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
gi|260560736|gb|EEX26713.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
Length = 215
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S L K+GA ++ Q WRL T +LH G+ H++ N ++L +G LE G +
Sbjct: 23 DESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHV 82
Query: 170 RVGLLYIISGFGGSLLS-ALFIQSNISVGASGALFGLLGSMLSELITNWT----IYTNKH 224
R ++Y+++G GG+L++ AL + +S GAS ALFGL G+M++ I N T Y +
Sbjct: 83 RFLIIYLLAGVGGNLMTLALGSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQ 142
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLL 259
L V INL I +P +D + H+GG ++GFLL
Sbjct: 143 SFVLAV---INLLFDINIPQIDTWGHVGGLLAGFLL 175
>gi|116514421|ref|YP_813327.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|116093736|gb|ABJ58889.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 223
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L KMGA+ VV + Q WRL T +LH G+ HI +N + + IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKH 224
R L+Y++SG GGSLL+ F IS GAS ALFGL G M + + +
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGPMTCAGFKDKDNTLLSFLGRQ 150
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVF 263
L L V INL + + +P VD H+GG I+G LL +
Sbjct: 151 ALALAV---INLVLDVFMPDVDILGHLGGLITGALLAVIL 187
>gi|366164287|ref|ZP_09464042.1| rhomboid family protein [Acetivibrio cellulolyticus CD2]
Length = 519
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR IT +LH + H+ AN LSL V G +E +G + +Y+ +G G++ S +F +
Sbjct: 228 WRFITPIFLHADLEHLFANSLSLFVFGRIVEGMYGHKKFTFIYLAAGVIGNVASFMF-ST 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
VGASG++FG G++L + N + ++++I INLA G P +DNFAH+G
Sbjct: 287 YSGVGASGSIFGFFGALLYLWVENPAAFRRYFGNNILIMIVINLAYGFASPGIDNFAHVG 346
Query: 252 GFISGFL 258
G I GFL
Sbjct: 347 GLIGGFL 353
>gi|417761549|ref|ZP_12409558.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|417776479|ref|ZP_12424317.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|418671929|ref|ZP_13233275.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|409942630|gb|EKN88238.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|410573846|gb|EKQ36890.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|410581051|gb|EKQ48866.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
Length = 514
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 52/265 (19%)
Query: 21 GSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVN 80
GSG+G+ P V+ P G + VT ++ + N+A+F++ + +
Sbjct: 65 GSGTGH----------PHAVARPRTLAGGTVTADPNLVTKVL---IGLNLALFLVQLSLG 111
Query: 81 NCPKNSVSCVARF--LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITC 138
+ RF LGR S+ F +PL G V + Q +RL+T
Sbjct: 112 D------DFTRRFELLGRASYTGF--SPLEG-----------------VAEGQYYRLLTA 146
Query: 139 NWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVG 197
+LHGG HI+ NMLSL +G LE+ G R LY++SG GS LS L +N S+G
Sbjct: 147 MFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGLAGSALSYLLAAANQPSLG 206
Query: 198 ASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISG 256
ASGA+FGL G+ + ++ Y + + L+V INL + + AHIGG ++G
Sbjct: 207 ASGAIFGLFGA--TAVLVRRLNYDMRPVIALLV---INLVLTFGWSGIAWEAHIGGLVAG 261
Query: 257 FLLGFVFLIRPQFGWVEQRYALSGY 281
++G+ + P+ +R AL Y
Sbjct: 262 VMIGYAMVHAPR-----ERRALVQY 281
>gi|383848356|ref|XP_003699817.1| PREDICTED: uncharacterized protein LOC100881480 [Megachile rotundata]
Length = 2095
Score = 84.7 bits (208), Expect = 7e-14, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL T +LH G+ H+ +L + LE+ G +R+ L+Y I G+L SA+F+
Sbjct: 1888 QFYRLFTTTFLHAGIIHLCITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 1947
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVIIAINLAVGILPHVDNFA 248
VG +GA F LL +++ E++ W + + + L+ I+ L +GILP VDN+A
Sbjct: 1948 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFILLGLLLLGILPWVDNYA 2007
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GFI GFL + + FG ++R R+ ++ + C++ IV L +++ L
Sbjct: 2008 HLFGFIFGFLAAYALMPFISFGHYDRR----------RKIWLIWICMILIVVLFTLLLTL 2057
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTE 344
+ + C C +C+P +R C ++
Sbjct: 2058 FYNVPVY--------ECEVCKLFNCIPFTRDFCASQ 2085
>gi|363740663|ref|XP_415618.3| PREDICTED: inactive rhomboid protein 2 [Gallus gallus]
Length = 812
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G++R+ +++I+SG G+L SA+F+
Sbjct: 609 QIYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWLRISIIFILSGITGNLASAIFL 668
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K L L I+ G+LP +DN A
Sbjct: 669 PYRAEVGPAGSQFGLLACLFVELFQSWQVLEKPWKALLNLSGIVLFLFVCGLLPWIDNIA 728
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GF+SG LL F FL FG V++ R++ M IVSL LV +GL
Sbjct: 729 HLFGFLSGLLLSFAFLPYITFGTVDK----------YRKRAMI------IVSL-LVFLGL 771
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
L + L N W YL+C+P TS++ + E
Sbjct: 772 FTSLFIWLYVYPIN--WRWIEYLTCLPFTSKFCEKYE 806
>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
pseudofirmus OF4]
gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
[Bacillus pseudofirmus OF4]
Length = 512
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR + +LH G H+ N L+L +G +E+ +G R L+Y I+G GS+ S F
Sbjct: 229 WRFFSSMFLHIGFIHLFMNSLALFYLGGAVERMYGTSRFVLIYFIAGLIGSISSFAF-NE 287
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIG 251
++ GASGA+FGL G++L ++ + ++VI+ INL G ++P +DN AHIG
Sbjct: 288 QVAAGASGAIFGLFGALLYFGTAQPKLFFRTMGMNVLVILGINLVFGFVMPMIDNGAHIG 347
Query: 252 GFISGFL 258
G + GFL
Sbjct: 348 GLVGGFL 354
>gi|198419227|ref|XP_002124734.1| PREDICTED: similar to rhomboid-related protein 2 [Ciona
intestinalis]
Length = 295
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ + WR I+ +LH G+ HIL N++ L+ G+ LE RV ++YI GSL S++
Sbjct: 108 REEVWRFISYMFLHAGIEHILGNVVLQLLFGLPLEMVHKSYRVAIVYISGVLAGSLASSI 167
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGIL----- 241
F VGASG ++ LLG LS +ITNW+ + H L +V+I+ ++L I
Sbjct: 168 FDPFVYLVGASGGVYALLGGYLSNVITNWSRLAFNGLHLLLVVIIVGVDLGFSIYRRVVV 227
Query: 242 -----PHVDNFAHIGGFISGFLLGFVFL 264
P V AH+ G ++G +G+VF
Sbjct: 228 VEGGSPPVSLVAHLAGGLAGVTIGYVFF 255
>gi|228476169|ref|ZP_04060877.1| rhomboid family protein [Staphylococcus hominis SK119]
gi|228269992|gb|EEK11472.1| rhomboid family protein [Staphylococcus hominis SK119]
Length = 485
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RLIT +LH HIL NMLSL + G +E G
Sbjct: 181 SDIKLLDVGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPY 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ISG G+ S F S ISVGASGA+FGL+G++L+ + + T + K + L+
Sbjct: 239 KMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKT-FNKKMIIQLL 297
Query: 230 VIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
V++ I + V + + +++ AH+GGFI GFL+ +
Sbjct: 298 VVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|420172602|ref|ZP_14679101.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
gi|394241763|gb|EJD87172.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
Length = 486
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 37/196 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F + ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTTTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGF- 257
S+ +Y +K+F + LVV+I +L + +++ AH+GGFI G
Sbjct: 278 SIFV------IMYLSKNFNKKMIGQLLIALVVLIVFSL---FMSNINIMAHLGGFIIGVL 328
Query: 258 --LLGFVFLIRPQFGW 271
L+G+ F + W
Sbjct: 329 ITLIGYYFKTQRSLFW 344
>gi|418619999|ref|ZP_13182810.1| peptidase, S54 family [Staphylococcus hominis VCU122]
gi|374823562|gb|EHR87557.1| peptidase, S54 family [Staphylococcus hominis VCU122]
Length = 485
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RLIT +LH HIL NMLSL + G +E G
Sbjct: 181 SDIKLLDVGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPY 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ISG G+ S F S ISVGASGA+FGL+G++L+ + + T + K + L+
Sbjct: 239 KMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKT-FNKKMIIQLL 297
Query: 230 VIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
V++ I + V + + +++ AH+GGFI GFL+ +
Sbjct: 298 VVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|417766158|ref|ZP_12414112.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400351612|gb|EJP03831.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 514
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|366089319|ref|ZP_09455792.1| membrane-associated serine protease [Lactobacillus acidipiscis KCTC
13900]
Length = 217
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 89/145 (61%), Gaps = 9/145 (6%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V++++ + + WRL T ++H G+ HI+ NM++L IGI++E FG R +LY+ISG G
Sbjct: 42 KVNQLIGQGEWWRLFTPMFIHIGLQHIVLNMVTLYFIGIQIEAVFGKWRFVILYLISGLG 101
Query: 182 GSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTLVVIIAINLA 237
G++ S +F +IS GAS ++FGL G+ ML E + T K FL LV+ +NL
Sbjct: 102 GNIASFVF-SPSISAGASTSIFGLFGAFLMLGESYRQNPYIRATAKQFLILVI---LNLG 157
Query: 238 VGILPHVDNFAHIGGFISGFLLGFV 262
+G +D HIGG ++GFL +V
Sbjct: 158 LG-FTGIDIAGHIGGLLAGFLTAYV 181
>gi|314936330|ref|ZP_07843677.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
gi|313654949|gb|EFS18694.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
Length = 485
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RLIT +LH HIL NMLSL + G +E G
Sbjct: 181 SDIKLLDVGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPY 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ISG G+ S F S ISVGASGA+FGL+G++L+ + + T + K + L+
Sbjct: 239 KMLGIYLISGLFGNFASLSFNISTISVGASGAIFGLIGAILTMMYLSKT-FNKKMIIQLL 297
Query: 230 VIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
V++ I + V + + +++ AH+GGFI GFL+ +
Sbjct: 298 VVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|423216154|ref|ZP_17202679.1| hypothetical protein HMPREF1074_04211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691005|gb|EIY84256.1| hypothetical protein HMPREF1074_04211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 584
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEGLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|418710371|ref|ZP_13271142.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418725109|ref|ZP_13283785.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|409961491|gb|EKO25236.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|410769307|gb|EKR44549.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 514
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGALSGIILF---QFG 511
>gi|29347217|ref|NP_810720.1| hypothetical protein BT_1807 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339116|gb|AAO76914.1| conserved protein, with rhomboid family domain [Bacteroides
thetaiotaomicron VPI-5482]
Length = 586
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L PS++ L GA D + WR +TCN++H G FH+L NM + + IGI LE
Sbjct: 179 ILEPSTLALLNWGA-DFGPLTLTGDWWRAVTCNFVHIGAFHLLMNMYAFIYIGIWLEHLI 237
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASG++FGL G L+ L+ + + + L
Sbjct: 238 GTRRMFVSYLLTGLCSAVFSLYMHAETISTGASGSIFGLYGIFLAFLLFHRIERSQRKAL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL GI VDN AHI
Sbjct: 298 LTSILIFVGYNLIYGIRAGVDNAAHI 323
>gi|159900030|ref|YP_001546277.1| rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
gi|159893069|gb|ABX06149.1| Rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
Length = 286
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 35/259 (13%)
Query: 36 RPQGVS-APPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFL 94
+P+ V +P V ++ ++ TW+ F+ N+ MFVI C +S +
Sbjct: 9 QPERVEYSPSQPVMVQLPNAPVRATWV---FMAINVVMFVI------CILQGMSVMGNTE 59
Query: 95 GRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVD-KHQGWRLITCNWLHGGVFHILANML 153
G + L ++GA S ++D + WRL T LHGG+ HI NM
Sbjct: 60 G---------------DAFVLIELGA-KWSPLMDIGGEWWRLFTATVLHGGIVHIGFNMY 103
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ-SNISVGASGALFGLLGSMLSE 212
+L +G +E+ +G +R ++Y+I+G GG+ S F + S+GASGA+FGL+G ++
Sbjct: 104 ALYALGPTVERFYGSLRFSVIYLIAGIGGAWASYSFGSLTGPSIGASGAIFGLIGCLIGF 163
Query: 213 LITNWTI---YTNKHFLTLVVIIAINLAVGI--LPHVDNFAHIGGFISGFLLGFVFLIRP 267
++ ++ + ++ +V AINL +G+ +DN+AHIGG + G +G+ R
Sbjct: 164 FLSARSVLGDFARQNLRQMVGTAAINLIIGLSFSSVIDNYAHIGGMLMGLAVGYGLAPRL 223
Query: 268 QF--GWVEQRYALSGYSAL 284
+ W + R SAL
Sbjct: 224 VYIADWFKPRIEAKAPSAL 242
>gi|312110225|ref|YP_003988541.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
gi|311215326|gb|ADP73930.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
Length = 389
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L K GA + ++ + WR T +LH G H+L N +L +G+ +E+ +G R
Sbjct: 211 VLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFF 269
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
+Y +GF G+L S LF S +S GASGA+FGL G++L ++ ++ +I
Sbjct: 270 IYFTAGFFGTLGSFLFTAS-LSAGASGAIFGLFGALLYFGTVYRHLFLQTIGTNIIGLIV 328
Query: 234 INLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
INL G I+P +DN HIGG I G+L + + F W +Q +L
Sbjct: 329 INLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQMRSL 374
>gi|445059551|ref|YP_007384955.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
gi|443425608|gb|AGC90511.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
Length = 484
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RL+T +LH HIL NMLSL + G +E G
Sbjct: 182 SDIKLLDVGGLVHFNVV--HGEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ +G G+ +S F + ISVGASGA+FGL+GS+ + +Y +K F V
Sbjct: 240 KMLAIYLFAGIFGNFVSLSFNTTTISVGASGAIFGLIGSIFA------ILYLSKTFDKRV 293
Query: 230 V---IIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSG 280
+ +IA+ + +G+ + +++ AH+GGFI G L+G+ F + W+ L
Sbjct: 294 IGQLLIALVILIGLSLFMSNINVMAHLGGFIGGLLITLIGYYFNVNRNIFWILLIVLLVL 353
Query: 281 YSALSRRKFMTYQCILW--IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
+ A+ R F + ++ ++ ++ ++ + + + +YLS + T+
Sbjct: 354 FVAMQIRIFSIKEDNIYDKLIRDQMLSGHYDEAKKIVNQSIKKDYADDQTYYLSGLITAT 413
Query: 339 WSCRTE------------PAFCSTTQDGNQLNVTCSSNGKSNLYI----LSNPSSSQIQS 382
S + E P + + N + N K+ YI +NP +SQ ++
Sbjct: 414 KSSKAEAMADWERGLRYFPNSATLNYEMAIANRSLKDNDKALKYIKKAVKANPKNSQYKN 473
Query: 383 LCTELCS 389
L EL
Sbjct: 474 LEKELSE 480
>gi|266621088|ref|ZP_06114023.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
gi|288867244|gb|EFC99542.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
Length = 206
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ V+++ + +RLIT ++H G+ HI+ NML L ++G LE+ G I+ Y+I
Sbjct: 43 GAMYAPLVIERGEYYRLITSVFMHFGISHIMNNMLILFILGDNLERALGHIKYLFFYLIC 102
Query: 179 GFGGSLLSALF----IQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G G +++S + ++ +S GASGA+FG++G +L +I N + LVV+I
Sbjct: 103 GVGANIVSMIVNLGEYRNVVSAGASGAIFGVIGGLLYAVIINRGRLEDLSTRQLVVMIVC 162
Query: 235 NLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
+L G VDN AHI G + G ++G + +P+
Sbjct: 163 SLYFGFTSTGVDNAAHIAGLLIGIVMGILLYRKPR 197
>gi|383125162|ref|ZP_09945818.1| hypothetical protein BSIG_4372 [Bacteroides sp. 1_1_6]
gi|251838549|gb|EES66635.1| hypothetical protein BSIG_4372 [Bacteroides sp. 1_1_6]
Length = 586
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L PS++ L GA D + WR +TCN++H G FH+L NM + + IGI LE
Sbjct: 179 ILEPSTLALLNWGA-DFGPLTLTGDWWRAVTCNFVHIGAFHLLMNMYAFIYIGIWLEHLI 237
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASG++FGL G L+ L+ + + + L
Sbjct: 238 GTRRMFVSYLLTGLCSAVFSLYMHAETISAGASGSIFGLYGIFLAFLLFHRIERSQRKAL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL GI VDN AHI
Sbjct: 298 LTSILIFVGYNLIYGIRAGVDNAAHI 323
>gi|423719255|ref|ZP_17693437.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
gi|383368158|gb|EID45433.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 389
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L K GA + ++ + WR T +LH G H+L N +L +G+ +E+ +G R
Sbjct: 211 VLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFF 269
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT----LV 229
+Y +GF G+L S LF S +S GASGA+FGL G++L T+Y + + T ++
Sbjct: 270 IYFTAGFFGTLGSFLFTAS-LSAGASGAIFGLFGALLY----FGTVYRHLFWQTIGTNII 324
Query: 230 VIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
+I INL G I+P +DN HIGG I G+L + + F W +Q +L
Sbjct: 325 GLIVINLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQMRSL 374
>gi|423219507|ref|ZP_17206003.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
gi|392625402|gb|EIY19471.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
Length = 584
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L PS++ L K GA D + WR ITCN++H G FH+L NM + + IG+ LE
Sbjct: 179 ILEPSTLALLKWGA-DFGPLTLTGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH-- 224
G R+ + Y+++G + S IS GASGA+FGL G L+ L+ + +
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAETISAGASGAIFGLYGIFLAFLLFHHIPRAQRKAL 297
Query: 225 FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+++++ + NL G+ +DN AHIGG +SGFLLG +++I +F + + +S
Sbjct: 298 LISILLFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVISYRFEKKDAQRTIS 352
>gi|421128003|ref|ZP_15588221.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133348|ref|ZP_15593496.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022356|gb|EKO89133.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434470|gb|EKP83608.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 514
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|340502586|gb|EGR29263.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 305
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
K+ LL L + GA + K+ K+Q WRL T +LH HIL N +S ++ +
Sbjct: 96 KQGQLLEIRIDVLDEFGANNAQKIQQKYQLWRLFTAMFLHLNFIHILFNSVSAFILVSVM 155
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTI-- 219
E +G + V ++YI+SG GG+L + +F IS GAS +L G+L +S ++ NW
Sbjct: 156 EYTYGTLYVIIIYILSGIGGNLFTDMFSSVIIISAGASTSLMGMLALFVSYMVLNWKSLE 215
Query: 220 YTNKH------FLTLVVIIAINLAVGILPH--VDNFAHIGGFISGFLLG 260
+T + T+++I L+ G VDNF H+GGFI+G L G
Sbjct: 216 FTGQLRCMFVCITTIIIIWVFLLSSGFSTKSGVDNFGHLGGFITGLLAG 264
>gi|262409313|ref|ZP_06085856.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644959|ref|ZP_06722693.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294805963|ref|ZP_06764830.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
gi|345509393|ref|ZP_08788992.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|229446228|gb|EEO52019.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|262352765|gb|EEZ01862.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639680|gb|EFF57964.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294446845|gb|EFG15445.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
Length = 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ PS+++L K GA D + WR +TCN++H G FH+L NM + + +G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEGLI 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R+ + Y+++G ++ S IS GASGA+FGL G L+ L + + L
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAHI 250
++++ + NL G+ +DN AHI
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|403222163|dbj|BAM40295.1| uncharacterized protein TOT_020000554 [Theileria orientalis strain
Shintoku]
Length = 691
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 13/163 (7%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
P++ G+LD + + + ++ +RL +H G+ H+L N+L+ I +E ++GF
Sbjct: 376 APNNRVFNLFGSLDANYIRNYNETFRLFWSMVMHKGLVHVLFNLLAQSQILWIIEPDWGF 435
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--- 225
R + +SG G+L +A+F S +G+SG LFGL+ S++ I NWT+ + +
Sbjct: 436 CRTASTFFLSGLVGNLAAAVFEPSFNVLGSSGCLFGLIASLIPYCIENWTLLASPIYIFF 495
Query: 226 ----LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
+T++ ++A N V + +AH GG++ GFL GF L
Sbjct: 496 FTLCITIISLLAFNDTVSV------YAHFGGWVGGFLWGFATL 532
>gi|374297549|ref|YP_005047740.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359827043|gb|AEV69816.1| putative membrane protein [Clostridium clariflavum DSM 19732]
Length = 517
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR +T +LH + H++ N LSL V G +E +G + +Y ++G GS+ S +F
Sbjct: 233 WRFLTPIFLHADLEHLIMNCLSLFVFGRIVEGMYGHKKFVFIYFMAGIMGSIASFMF-SP 291
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVG-ILPHVDNFAHIG 251
+ +VGASGA+FGL+G++L + N ++ ++++++ INL G I P +DN+ HIG
Sbjct: 292 HSAVGASGAIFGLMGALLYFSVENPALFKKYFGNSILLMVIINLVYGFIRPGIDNYGHIG 351
Query: 252 GFISGFL 258
G I GFL
Sbjct: 352 GLIGGFL 358
>gi|417772121|ref|ZP_12420011.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418680537|ref|ZP_13241786.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418703562|ref|ZP_13264446.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418715819|ref|ZP_13275930.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|421118289|ref|ZP_15578634.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400327895|gb|EJO80135.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409946078|gb|EKN96092.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410010137|gb|EKO68283.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766698|gb|EKR37381.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410788320|gb|EKR82042.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|455668108|gb|EMF33357.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 514
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|153808412|ref|ZP_01961080.1| hypothetical protein BACCAC_02706 [Bacteroides caccae ATCC 43185]
gi|149128734|gb|EDM19951.1| peptidase, S54 family [Bacteroides caccae ATCC 43185]
Length = 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L PS++ L K GA D + WR ITCN++H G FH+L NM + + IG+ LE
Sbjct: 179 ILEPSTLALLKWGA-DFGPLTLTGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH-- 224
G R+ + Y+++G + S IS GASGA+FGL G L+ L+ + +
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAETISAGASGAIFGLYGIFLAFLLFHHIPRAQRKAL 297
Query: 225 FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+++++ + NL G+ +DN AHIGG +SGFLLG +++I +F + + +S
Sbjct: 298 LISILLFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVISYRFEKKDAQRTIS 352
>gi|418689558|ref|ZP_13250679.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|418729718|ref|ZP_13288265.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
gi|400361237|gb|EJP17204.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|410775896|gb|EKR55887.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
Length = 514
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|418035808|ref|ZP_12674250.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354689374|gb|EHE89372.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 215
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L +MGA+ VV + Q WRL T +LH G+ HI +N + + IG E FG
Sbjct: 23 ESTSVLLEMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKH 224
R L+Y++SG GGSLL+ F IS GAS ALFGL G+M + + +
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 142
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
L L V INL + + +P VD H+GG I+G LL +
Sbjct: 143 ALALAV---INLVLDVFMPDVDILGHLGGLITGALLAVI 178
>gi|385816085|ref|YP_005852476.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126122|gb|ADY85452.1| Putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 223
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L KMGA+ VV + Q WRL T +LH G+ HI +N + + IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 170 RVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSM----LSELITNWTIYTNKH 224
R L+Y++SG GGSLL+ F IS GAS ALFGL G+M + + +
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 150
Query: 225 FLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVF 263
L V INL + + +P VD H+GG I+G LL +
Sbjct: 151 AWALAV---INLVLDVFMPDVDILGHVGGLITGALLAVIL 187
>gi|336234689|ref|YP_004587305.1| rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
gi|335361544|gb|AEH47224.1| Rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
Length = 389
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L K GA + ++ + WR T +LH G H+L N +L +G+ +E+ +G R
Sbjct: 211 VLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFF 269
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT----LV 229
+Y +GF G+L S LF S +S GASGA+FGL G++L T+Y + + T ++
Sbjct: 270 IYFTAGFFGTLGSFLFTAS-LSAGASGAIFGLFGALL----YFGTVYRHLFWQTIGTNII 324
Query: 230 VIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
+I INL G I+P +DN HIGG I G+L + + F W +Q +L
Sbjct: 325 GLIVINLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQMRSL 374
>gi|299823020|ref|ZP_07054906.1| possible Rhomboid protease [Listeria grayi DSM 20601]
gi|299816549|gb|EFI83787.1| possible Rhomboid protease [Listeria grayi DSM 20601]
Length = 512
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRLIT +LH G HI AN + L ++G E+ +G R L+ +I GF G+L S + +
Sbjct: 228 WRLITPMFLHNGWMHIAANAVMLYIVGPWAEKIYGKWRFALILLIGGFAGNLAS-FVLNN 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
++SVGAS ++F + G++L ++ +Y + ++ +N+ +G+ +D HIG
Sbjct: 287 HLSVGASTSVFAVFGALLYLVVLKPNLYAKTIGTNVATLVVVNILIGLFSAEIDMMGHIG 346
Query: 252 GFISGFLL-GFVFLIRPQFGWVEQRYALS 279
G + GFL+ G + L F W Y+LS
Sbjct: 347 GLVGGFLIAGSISLPNQYFNWKRALYSLS 375
>gi|357521427|ref|XP_003631002.1| hypothetical protein MTR_8g106030 [Medicago truncatula]
gi|355525024|gb|AET05478.1| hypothetical protein MTR_8g106030 [Medicago truncatula]
Length = 265
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 19/144 (13%)
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELI-TNWTIYTNKHFLTLVV--IIAINLAVGILPH 243
LF QSNI VG SGA+ GLL M+ ELI ++T L + + NL +GI+P
Sbjct: 137 VLFTQSNIFVGVSGAIMGLLRGMIYELIFAKLLVFTISIMFNLSIGMVPVFNLTIGIVPI 196
Query: 244 VDNFAHIGGFISGFLLGFVFLIRPQ-FGWVEQRYALSGYSALSRRKFMTYQCILWIVSLV 302
V+NF IGG I GFLLGFV L + F +Q+ L +R L I+ +
Sbjct: 197 VNNFGLIGGLIPGFLLGFVLLCKKDPFVLPDQK--------LHKR-------CLPIICFI 241
Query: 303 LVIVGLTLGLVMLLRGVDANDHCS 326
L+ GL GLV LL+GV+ NDHCS
Sbjct: 242 LLSTGLIGGLVSLLKGVNMNDHCS 265
>gi|110803398|ref|YP_698757.1| rhomboid family protein [Clostridium perfringens SM101]
gi|110683899|gb|ABG87269.1| rhomboid family protein [Clostridium perfringens SM101]
Length = 342
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LH G+ H+L NM +L ++G +E+ +G + ++Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHSGIVHLLFNMYALYILGDFIERIYGAKKYLVIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+G+ + ++D AH GGFI+G +LG F
Sbjct: 307 FIGLSMSNIDISAHFGGFIAGAILGLFF 334
>gi|168186765|ref|ZP_02621400.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
gi|169295367|gb|EDS77500.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
Length = 202
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
+V Q +RLITC +LHGG+ H+ NM +L IG +E+ +G ++ ++Y++ G SL
Sbjct: 63 LVSSGQYYRLITCMFLHGGLVHLALNMYALEAIGPIVERIYGKMKYIIIYLVGGLISSLS 122
Query: 186 SALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHV 244
S +F + +S+GASGA+F LLG+M I + +V +I IN+ +G+ +P++
Sbjct: 123 SYVF-STGVSIGASGAIFALLGAMFVLTIKMRDVVGKAVIKNIVSVIGINIFIGLAIPNI 181
Query: 245 DNFAH 249
DNFAH
Sbjct: 182 DNFAH 186
>gi|418701499|ref|ZP_13262424.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759581|gb|EKR25793.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 514
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|417784544|ref|ZP_12432250.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|409952361|gb|EKO06874.1| peptidase, S54 family [Leptospira interrogans str. C10069]
Length = 514
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 493 HIGGLVSGTLSGIILF---QFG 511
>gi|392393767|ref|YP_006430369.1| hypothetical protein Desde_2230 [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524845|gb|AFM00576.1| putative membrane protein [Desulfitobacterium dehalogenans ATCC
51507]
Length = 275
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V+ ++ + + WRL T +LH G H+ N+ +L +G E+ G IR +YI+SG
Sbjct: 131 KVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGPIAEELLGRIRYITVYILSGIL 190
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
GS+ S LF + IS GASGA+FG+LG+++ ++ + +L V+I INL++G
Sbjct: 191 GSVASFLFTDA-ISAGASGAIFGILGALVVYSRRKPFLWKSGFGKSLAVVILINLSLGFF 249
Query: 242 PH-VDNFAHIGGFISGFLLGFVFLIR 266
+D +AH+GG +SG LL ++F ++
Sbjct: 250 QTGIDVYAHMGGLVSGMLLTWIFSMK 275
>gi|291521749|emb|CBK80042.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Coprococcus catus GD/7]
Length = 211
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 90/149 (60%), Gaps = 5/149 (3%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
++++H+ +RL+TC ++H G+ H+ NML L IG LE+ G + ++Y+ +G G S +
Sbjct: 57 IIEEHEYYRLLTCTFIHFGISHLFNNMLVLAYIGDNLERALGKFKYLIVYLAAGVGSSAV 116
Query: 186 SALF--IQSNISV--GASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
SA++ I+ SV GASGA+FG++G++L +I N + + L++ ++ G+
Sbjct: 117 SAVWSMIKDEYSVSGGASGAIFGVVGALLVIVIRNRGQLEDLNSRQLMLFAGFSIYHGVT 176
Query: 242 PH-VDNFAHIGGFISGFLLGFVFLIRPQF 269
+DN AHI GF+ G LLG + R ++
Sbjct: 177 SAGIDNMAHISGFVIGALLGGLLYRRKRY 205
>gi|336053788|ref|YP_004562075.1| hypothetical protein WANG_0278 [Lactobacillus kefiranofaciens ZW3]
gi|333957165|gb|AEG39973.1| possible membrane protein [Lactobacillus kefiranofaciens ZW3]
Length = 226
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 102 FKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIG 159
F LG S T L KMGA+ VV Q WRL T +LH GV H+++N + + +G
Sbjct: 24 FLVEVFLGGSENTNVLMKMGAMSNFAVVVGQQWWRLFTAQFLHIGVMHLVSNAVIIYYMG 83
Query: 160 IRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM----LSELI 214
+ +E G R Y+++G GG+LLS F +S GAS ALFGL G+M L +
Sbjct: 84 LYMEPLMGHWRFLATYLLAGIGGNLLSLAFGSDRGLSAGASTALFGLFGAMTAIGLRNMR 143
Query: 215 TNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFV 262
Y + L + INLA+ + +P +D + H+GG ISGFLL +
Sbjct: 144 NPMISYLGRQAFVLAL---INLALDLFVPGIDIWGHLGGLISGFLLAII 189
>gi|419758894|ref|ZP_14285206.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|419857800|ref|ZP_14380503.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
gi|421185357|ref|ZP_15642768.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|421188834|ref|ZP_15646166.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|421189623|ref|ZP_15646937.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|421190919|ref|ZP_15648203.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|421193560|ref|ZP_15650806.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|421195397|ref|ZP_15652605.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|421197510|ref|ZP_15654685.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399904349|gb|EJN91805.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|399964167|gb|EJN98821.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|399964538|gb|EJN99179.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|399971719|gb|EJO05958.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|399972713|gb|EJO06912.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|399973615|gb|EJO07780.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|399975119|gb|EJO09187.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399975822|gb|EJO09857.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|410497271|gb|EKP88746.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
Length = 241
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPS +L +G VS ++ K Q +RL T +LH + HI +NM +L++ G +E+ FG
Sbjct: 50 GPSIQSLILLGG-QVSSLILKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGK 108
Query: 169 IRVGLLYIISGFGGSLLSALFIQSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
+ L+Y++SG G+LL+ +F + +SVGASGALFGL G+M+S W N F
Sbjct: 109 TKYLLIYLLSGLWGNLLTLIFDPNPNIVSVGASGALFGLFGAMIS---IAWFNRNNPIFK 165
Query: 227 TLVVIIA----INLAVGILPH-VDNFAHIGGFISGFLLGFV 262
+V+ A NL I VD +AHIGG ISG L V
Sbjct: 166 RQLVVFAALALFNLISNIGDQSVDIWAHIGGLISGILTSLV 206
>gi|116490957|ref|YP_810501.1| membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290890431|ref|ZP_06553506.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|419859592|ref|ZP_14382246.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|116091682|gb|ABJ56836.1| Membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290479827|gb|EFD88476.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|410496609|gb|EKP88092.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 236
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPS +L +G VS ++ K Q +RL T +LH + HI +NM +L++ G +E+ FG
Sbjct: 45 GPSIQSLILLGG-QVSSLILKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGK 103
Query: 169 IRVGLLYIISGFGGSLLSALFIQSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
+ L+Y++SG G+LL+ +F + +SVGASGALFGL G+M+S W N F
Sbjct: 104 TKYLLIYLLSGLWGNLLTLIFDPNPNIVSVGASGALFGLFGAMIS---IAWFNRNNPIFK 160
Query: 227 TLVVIIA----INLAVGILPH-VDNFAHIGGFISGFLLGFV 262
+V+ A NL I VD +AHIGG ISG L V
Sbjct: 161 RQLVVFAALALFNLISNIGDQSVDIWAHIGGLISGILTSLV 201
>gi|345857374|ref|ZP_08809813.1| rhomboid family protein [Desulfosporosinus sp. OT]
gi|344329492|gb|EGW40831.1| rhomboid family protein [Desulfosporosinus sp. OT]
Length = 328
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V+ ++ + WRL+T ++H G+ H+ N+ +L +G E+ FG + ++Y+ SG G
Sbjct: 177 KVNDLIQAGEVWRLLTSIFIHIGIIHLAFNLYALRALGPLTEEFFGHPKFLMIYMFSGLG 236
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI- 240
GS+ S LF +S GASGA+FGLLG++L I ++ + + LVV+I +N GI
Sbjct: 237 GSIASYLF-SPALSAGASGAIFGLLGALLYYCIKRPYLWKSGLGMNLVVVILVNFGFGIS 295
Query: 241 LPHVDNFAH 249
P +DN+AH
Sbjct: 296 QPGIDNYAH 304
>gi|116206648|ref|XP_001229133.1| hypothetical protein CHGG_02617 [Chaetomium globosum CBS 148.51]
gi|88183214|gb|EAQ90682.1| hypothetical protein CHGG_02617 [Chaetomium globosum CBS 148.51]
Length = 526
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 29/236 (12%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R I ++H G+ HI NML L +G +E+ G IR L+Y+ +G G ++ +
Sbjct: 286 NQWFRFIVPIFMHAGLIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGFVMGGNY 345
Query: 190 IQSNI-SVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVDN 246
+ I S GASG+LFG++ L +L+ +W + K L +++ I I+ +G+LP +DN
Sbjct: 346 AGTAIASTGASGSLFGIIALTLLDLLYSWKDRVSPVKDLLFILLDIVISFVLGLLPGLDN 405
Query: 247 FAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYALS----GYSALSRRK--------F 289
F+HIGGF+ G LG L +R + G + YA S G +AL F
Sbjct: 406 FSHIGGFLMGLGLGVCLLHSPNSLRRRIG-DDVPYASSHVSGGSAALGTPPSFVRNPVGF 464
Query: 290 MTYQCILW-----IVSLVLVIVGLTLGLVMLLRGVDANDH-CSWCHYLSCVPTSRW 339
+ LW I + LV+V T+ ++LL+ + C WC YLSC+P W
Sbjct: 465 FKGRRPLWWAWWLIRAGALVLV--TVVFILLLKNFYVDRATCDWCRYLSCLPVRDW 518
>gi|410657229|ref|YP_006909600.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|410660265|ref|YP_006912636.1| Rhomboid-like protein [Dehalobacter sp. CF]
gi|409019584|gb|AFV01615.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|409022621|gb|AFV04651.1| Rhomboid-like protein [Dehalobacter sp. CF]
Length = 203
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
++ ++D Q WRL+T ++H G H+L N+ +L+V+G E+ FG R L+Y+ SG
Sbjct: 51 KMNTLIDAGQYWRLLTSMFIHIGFTHLLFNVYALIVLGKLAERLFGHGRFLLIYLFSGLA 110
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
GSL+S L+ +S GASGA+FGLLG+++ + L +++ INL G++
Sbjct: 111 GSLISYLW-GPELSAGASGAIFGLLGAIIIYGCRKPAFWRTGLITNLAIVLGINLVFGVV 169
Query: 242 -PHVDNFAHIGGFISG 256
+DNFAH+GG G
Sbjct: 170 FSGIDNFAHLGGLFGG 185
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 28/192 (14%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
DV V + Q +RL+T +LHG V H+L NMLSL +G LE G R LY +SG
Sbjct: 123 DVEGVAEG-QSYRLLTSMFLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLA 181
Query: 182 GSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI 240
GS L+ L + N ++GASGA+FGL G+ + L+ N ++ ++AINL
Sbjct: 182 GSALAYLLAEPNTATLGASGAIFGLFGAT-AVLMRRL----NYDMRPIIALLAINLIFTF 236
Query: 241 LP--HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWI 298
P ++ AHIGG ++G ++G+ + P+ RR + Y + +
Sbjct: 237 SPGFNISWQAHIGGLVAGVVIGYGMVHAPR----------------ERRALIQYGTVALV 280
Query: 299 VSLVLVIVGLTL 310
++ V++GLTL
Sbjct: 281 LA---VVIGLTL 289
>gi|116619460|ref|YP_821616.1| rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116222622|gb|ABJ81331.1| Rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 280
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
FS Q + TL GA ++ + + WRL+T +LHGG+ HI N +L
Sbjct: 74 FSLQSGNSDAFFNLDGRTLIAFGA-KFDPLLAQGEWWRLVTAGFLHGGMLHIFMNTWALF 132
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
+G ++E+ FG R+ ++Y ++ G SA++ +SVGAS +FGLLG+M++ + +
Sbjct: 133 GLGAQVEETFGSSRMWVIYFVATVTGFYASAVW-SPALSVGASAGIFGLLGAMIAFGVRH 191
Query: 217 WTIYTNKHFLTLVVIIA-INLAVGIL--PHVDNFAHIGGFISGFLLGFV 262
+T F + + A +NL GIL +DN AHIGG I GF + ++
Sbjct: 192 -HGFTGDAFRSQYMFWAGLNLLFGILGSGRIDNAAHIGGLIGGFAVAYM 239
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 30/198 (15%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
K++D+ + WRL+ +LH G+ H+LANM +L V+G +LE +G R +LY++SG GG +
Sbjct: 96 KLIDQGEVWRLVVPMFLHIGMIHLLANMYALWVLGPQLESLYGSARFTILYLLSGIGGFV 155
Query: 185 LSALFIQ-SNISVGASGALFGLLGSML------SELITNWTIYTNKH--FLTLVVIIAIN 235
S F +I GASGALFG+ G++L I T + +LTL++ + I
Sbjct: 156 ASYFFAHPESIGAGASGALFGMFGALLVFVYKYRAEIPPMVRATMQRGVWLTLIINLVIT 215
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCI 295
++ P + H+GG ++G +G I YS + RK T +
Sbjct: 216 FSI---PFISRSGHVGGLLTG--IGLALFI--------------PYSPPNERKTPTVWRV 256
Query: 296 LWIVSLVLVIVGLTLGLV 313
IV ++ +V L GL+
Sbjct: 257 WQIV--LMAVVALCFGLM 272
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LHGG+ H+L NM +L ++G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+ + + ++D AH GGFI+G +LG F
Sbjct: 307 FISLSMSNIDISAHFGGFIAGAILGLFF 334
>gi|194466614|ref|ZP_03072601.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
gi|194453650|gb|EDX42547.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
Length = 219
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++V L KMGA S ++ + + WRL++ +LH G+ H++ N ++LL IG +E+ FG R
Sbjct: 34 NTVILLKMGARSTS-LIREGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI---TNWTIYTNKHFLT 227
+ ++Y IS G+L SA+F+ IS GAS A+FGL G+ L + N +
Sbjct: 93 MVVIYFISAIFGNLASAVFMPLTISAGASTAIFGLFGAFLMLGVCFHRNIVVRVLSRTFL 152
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
L VII I + LP VD HIGG GF + F+ + P G V++
Sbjct: 153 LFVIINIVMDF-FLPGVDLVGHIGGLFGGFFIAFI-VGAPMLGTVDR 197
>gi|358068283|ref|ZP_09154750.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
gi|356693542|gb|EHI55216.1| hypothetical protein HMPREF9333_01631 [Johnsonella ignava ATCC
51276]
Length = 206
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 99 FQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVI 158
F F E + T+ + GA V++ + WRL+T ++H G+ HI NM+ L +I
Sbjct: 19 FFLFLETVGSSEDADTMLRYGAEFTPYVIEGKEYWRLLTSMFMHFGIDHIANNMIVLFMI 78
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFI----QSNISVGASGALFGLLGSMLSELI 214
G LE+ G ++ + Y+I G G +++S F ++S GASGA+FG++G +L +I
Sbjct: 79 GDNLERALGHVKYLIFYLICGIGANIVSLFFEMLTGNYSVSAGASGAVFGVMGGLLWAVI 138
Query: 215 TNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLL 259
N + + I ++L G + VDN AH+GG + GF L
Sbjct: 139 ANRGRLEELTSQRMAIFIVLSLYYGFISTGVDNAAHVGGAVIGFCL 184
>gi|414156375|ref|ZP_11412677.1| hypothetical protein HMPREF9186_01097 [Streptococcus sp. F0442]
gi|410870022|gb|EKS17981.1| hypothetical protein HMPREF9186_01097 [Streptococcus sp. F0442]
Length = 225
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 84/154 (54%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDN 246
A+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 113 AIFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLIVVNLIFSFMPDISM 172
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSG 280
HIGG ++G +L +VF +R + ++++ Y +S
Sbjct: 173 AGHIGGLVAGVMLAYVFPVRGEALFMKRSYQISA 206
>gi|387780641|ref|YP_005755439.1| hypothetical protein SARLGA251_14550 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177743|emb|CCC88222.1| putative membrane protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 487
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 16/196 (8%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSGY 281
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+ L +
Sbjct: 298 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWILLIGMLVIF 354
Query: 282 SALSRRKFMTYQCILW 297
AL R F + I++
Sbjct: 355 IALQIRIFTIKEDIIY 370
>gi|255533925|ref|YP_003094297.1| rhomboid family protein [Pedobacter heparinus DSM 2366]
gi|255346909|gb|ACU06235.1| Rhomboid family protein [Pedobacter heparinus DSM 2366]
Length = 513
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL++ + H + H+ NM +L+ IG+ E + G+ + ++YI+SG G+LLS
Sbjct: 218 QWWRLLSSQFYHFSLLHLFFNMYALIYIGLMTENKLGWAKTLIVYILSGTCGALLSVYGH 277
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL--VVIIAINLAVGILPH-VDNF 247
+ GASGA+ G+ G+ L+ L++N T L + V+++A L G+L DN
Sbjct: 278 KIGFMGGASGAIMGMFGAFLALLLSNAFEKTAARALLISTVIVVAYMLLNGLLSETADNS 337
Query: 248 AHIGGFISGFLLGFV 262
AH+GG +SGFL+G++
Sbjct: 338 AHLGGLVSGFLIGYL 352
>gi|421131221|ref|ZP_15591405.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|410357472|gb|EKP04727.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
Length = 447
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 306 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 365
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN +
Sbjct: 366 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 425
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 426 HIGGLVGGTILGIILF---QFG 444
>gi|153853648|ref|ZP_01995028.1| hypothetical protein DORLON_01019 [Dorea longicatena DSM 13814]
gi|149753803|gb|EDM63734.1| peptidase, S54 family [Dorea longicatena DSM 13814]
Length = 204
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
+ K GA+ V ++ + + +RL + +LH G H++ NM+ L+ +G LE + G ++ ++
Sbjct: 37 MLKHGAMYVPYLIQRGEYYRLFSSMFLHFGYDHLVNNMIVLVAMGWNLELDIGKVKFLIV 96
Query: 175 YIISGFGGSLLSALF-IQSN---ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
Y +SG G++LSA + IQ+ IS GASGA+FG++G++L I N + LV
Sbjct: 97 YFVSGLAGNVLSAWWDIQTGSMAISAGASGAIFGIIGALLYVAIRNRGRIGDISGRGLVF 156
Query: 231 IIAINLAVGILP-HVDNFAHIGGFISGFLLGFVFLIRPQ 268
+I + L G VDN AHIGG ++GFL G V L R +
Sbjct: 157 MIVLTLYYGFTSGGVDNMAHIGGLLAGFLSG-VLLYRKR 194
>gi|381399873|ref|ZP_09924890.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
gi|380772836|gb|EIC06523.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
Length = 281
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T +H +FHI NML+L +G LE G R LY++S GGS+L+AL
Sbjct: 117 QPWRLLTVTLVHASIFHIAFNMLALWALGRSLEPLLGRWRFLALYLLSALGGSVLTALLA 176
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILP--HVDNFA 248
+ VGASGA++GLLG+M +I + + + V++ INL + LP ++ A
Sbjct: 177 PNTWVVGASGAVWGLLGAMF--VIGR---HLGANVTAIAVLLGINLVITFLPGSNIAWQA 231
Query: 249 HIGGFISGFLLGFVF 263
HIGG + G L+G +F
Sbjct: 232 HIGGGLVGALIGVIF 246
>gi|221057219|ref|XP_002259747.1| rhomboid protease [Plasmodium knowlesi strain H]
gi|193809819|emb|CAQ40523.1| rhomboid protease, putative [Plasmodium knowlesi strain H]
Length = 664
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
++G L+ + + + + +RL +LHGG HI+ N+L + I +E ++GF+R LL+
Sbjct: 348 NQLGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVLCQIQILWMIEPDWGFLRTLLLF 407
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIA 233
ISG G+LLSA+ +++G+SG+L+GL+G++ + I W + +V++I
Sbjct: 408 FISGVTGNLLSAVCDPCGVTIGSSGSLYGLIGALFTYHIEYWKTIPRPCSVLIFMVIVII 467
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ +G+ + DN+AH+GG + G L GF
Sbjct: 468 FGIFIGMFGYTDNYAHMGGCLGGILYGFA 496
>gi|150020441|ref|YP_001305795.1| rhomboid family protein [Thermosipho melanesiensis BI429]
gi|149792962|gb|ABR30410.1| Rhomboid family protein [Thermosipho melanesiensis BI429]
Length = 223
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 5/166 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ V L + +V Q +R++T ++HGG H++ NM +L +G +E +G
Sbjct: 28 PNEVMLYLLFGAQYGPLVSSGQWYRIVTAMFVHGGFIHLVFNMYALYFLGRIVENVYGTD 87
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LT 227
+ Y +G G+L + F ++ SVGASGA+FGL+G + + T YT K
Sbjct: 88 KFLFFYFSTGIIGNLATQFFYYNSFSVGASGAIFGLVGVLFAAGFRRDTPYTLKPITGTA 147
Query: 228 LVVIIAINLAVGILP--HVDNFAHIGGFISGFLLGFVFLIRPQFGW 271
+ +I +N+ +G +P +++N AH+GGF+SG LG+ F+ ++ W
Sbjct: 148 FLPMILVNIFLGFIPGSNINNAAHLGGFLSGMALGY-FIPIYEYSW 192
>gi|456972143|gb|EMG12595.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 226
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 85 QWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 144
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 145 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 204
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 205 HIGGLVSGALSGIILF---QFG 223
>gi|365925240|ref|ZP_09448003.1| rhomboid family integral membrane protein [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|420266562|ref|ZP_14769020.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|394425142|gb|EJE98158.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
Length = 216
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 88/158 (55%), Gaps = 9/158 (5%)
Query: 109 GPSSV-TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
G SV L + GA V+ ++ Q WRLIT +LH G HI+ NM++L +GI+LE G
Sbjct: 27 GSQSVGVLVEFGA-KVNTLIVAGQWWRLITPMFLHIGFEHIVLNMITLYFVGIQLENILG 85
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNK 223
R +Y++SG G+L S F +S GAS ALFGL G M+ E ++ + +
Sbjct: 86 RGRFLAVYLVSGIAGNLASFAFNPDALSAGASTALFGLFGIYLMMGESFSSNPYIRAMGR 145
Query: 224 HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
FL LVV +N+ G VD HIGG + GFL+G+
Sbjct: 146 QFLLLVV---LNIMFGFYGSVDLAGHIGGLVGGFLMGY 180
>gi|156094408|ref|XP_001613241.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802115|gb|EDL43514.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 593
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 116 QKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLY 175
++G L+ + + + + +RL +LHGG HI+ N++ + I +E ++GF+R +L+
Sbjct: 277 NQLGGLNTNYIRNYGELYRLFWSVYLHGGFMHIIFNVICQIQILWMIEPDWGFLRTMMLF 336
Query: 176 IISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIA 233
SG G+LLSA+ +++G+SGAL+GL+G++ + I W + +V++I
Sbjct: 337 FTSGVTGNLLSAVCDPCGVTIGSSGALYGLIGALFTYYIEYWKTIPRPCCVLIFMVIVII 396
Query: 234 INLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ +G+ + DN+AH+GG + G L GF
Sbjct: 397 FGIFIGMFGYTDNYAHMGGCLGGILYGFA 425
>gi|421107208|ref|ZP_15567763.1| peptidase, S54 family [Leptospira kirschneri str. H2]
gi|410007727|gb|EKO61413.1| peptidase, S54 family [Leptospira kirschneri str. H2]
Length = 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN +
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 493 HIGGLVGGTILGIILF---QFG 511
>gi|123446916|ref|XP_001312204.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121894043|gb|EAX99274.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 366
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L PS+ + K GA+ K+ +Q WRL T +LHG HIL N L + + E+ +
Sbjct: 170 MLEPSTSIVIKYGAMSTQKIRYDYQFWRLFTYMFLHGSWIHILFNSLGQFMFCLGCEKSW 229
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI---YTNK 223
G++R +Y +SG G L+SA+ + ISVGAS +FG++G+ + ++ W+
Sbjct: 230 GYVRYIAIYFLSGILGGLVSAMKSANQISVGASAGIFGIMGAYAALILLLWSQLQGMAKI 289
Query: 224 HFLTLVVIIAIN-LAVGILPHVD 245
T ++++ I + V LPHVD
Sbjct: 290 QLTTFLIMLPIMFICVSFLPHVD 312
>gi|418741786|ref|ZP_13298160.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410751234|gb|EKR08213.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN +
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 493 HIGGLVGGTILGIILF---QFG 511
>gi|398339922|ref|ZP_10524625.1| hypothetical protein LkirsB1_10989 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN +
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 493 HIGGLVGGTILGIILF---QFG 511
>gi|418679207|ref|ZP_13240471.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418686873|ref|ZP_13248037.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|421090060|ref|ZP_15550861.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|400320332|gb|EJO68202.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001323|gb|EKO51937.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|410738580|gb|EKQ83314.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
Length = 514
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN +
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 493 HIGGLVGGTILGIILF---QFG 511
>gi|17549744|ref|NP_523084.1| hypothetical protein RS04802 [Ralstonia solanacearum GMI1000]
gi|17431999|emb|CAD18676.1| probable membrane transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 569
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL P+ V G + + V + + WRL++ +LH GV H+ NM+ L G+ +E+
Sbjct: 228 NPLQTPTDVLFNLGG--NAAFEVQQGEWWRLLSATFLHAGVLHLAVNMIGLYAAGVTVER 285
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSML---SELITNWTIY 220
+G + L+Y+ +G GS LS F Q I VGASGA+FG+ G+ L +
Sbjct: 286 IYGPVAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIRQYRGRMPET 345
Query: 221 TNKHFLTLV-VIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
+K LT + + + +L G+ P VDN AH+GG I G LL + R +R
Sbjct: 346 LSKRLLTQIGLFVLYSLVQGLTKPGVDNAAHVGGLIGGCLLACILPARLDMDRYRRR 402
>gi|379021331|ref|YP_005297993.1| putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|418562599|ref|ZP_13127056.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
gi|359830640|gb|AEV78618.1| Putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|371973703|gb|EHO91051.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
Length = 487
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
+LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 298 LISLVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|298245593|ref|ZP_06969399.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
gi|297553074|gb|EFH86939.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
Length = 294
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 8/170 (4%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
S QP + L + L GA +V +H+ WR +T +LH + H+ NML+LL+
Sbjct: 82 SIQPADDASL----TQVLIDYGAKYNPAIVQQHEYWRFLTPMFLHANLLHLGLNMLNLLM 137
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW 217
+GI LE+ G R LYII+G L S F +S+GASGA+FGL+G +IT+
Sbjct: 138 LGIFLERLLGHTRYLFLYIITGIISILASFYFAPEEVSLGASGAIFGLVGVFSIFVITHR 197
Query: 218 TIYTNK---HFLTLVVIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFVF 263
+ L L+VII INL VG ++ +VDN+AH GG ISG LLG +
Sbjct: 198 RAFPFGGLFSILYLIVIIGINLGVGFMIANVDNYAHFGGLISGCLLGLCY 247
>gi|209876201|ref|XP_002139543.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555149|gb|EEA05194.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 273
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
L PS TL K A V K++ + Q WRL+ +LH ++HI+ N+ L + I E ++G
Sbjct: 66 LSPSVPTLIKFQA-SVPKLIKQGQIWRLLISLFLHASIWHIIFNIFFQLKLAISCEDKYG 124
Query: 168 FIRVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
I +Y I+G G+L SA S I +VGAS + FGL+G+ L+ELI W I NK +
Sbjct: 125 RILCPSIYFITGIIGNLFSAAIRNSCIVAVGASTSGFGLIGTQLAELILFWHIIQNKERV 184
Query: 227 TLVVIIAINLAVGI-----LPHVDNFAHIGGFISGFLLG 260
L +++ L V I VD++ H GGF++G +G
Sbjct: 185 ILNILLFGILMVLITWGNPTSAVDHWGHTGGFLTGLAMG 223
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA + ++ + +RL+T +LHGG+ H+L NM +L ++G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-LVVIIAINL 236
SG S+ S L+ + VGASGA+FGLLG+ L N K +T ++VII +N+
Sbjct: 249 SGIVASIFS-LYFSPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKALVTNIIVIILLNV 306
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVF 263
+G+ + ++D A GGFI+G +LG F
Sbjct: 307 FIGLSMSNIDISARFGGFIAGAILGLFF 334
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 5/154 (3%)
Query: 120 ALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
A++V + +K Q +R +T + H G+ H+L NM+ L+ +G R+E G + ++YI++G
Sbjct: 172 AVNVYAISEKRQYYRFLTSMFTHFGITHLLGNMVILIALGARIENIIGRLNYVIVYIVTG 231
Query: 180 FGGSLLSAL-FIQSNI---SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAIN 235
+ S + F ++I S GASGA+FGLLG ++ N + + ++++ +
Sbjct: 232 LAAAFASYINFFCNDIYDYSAGASGAIFGLLGVLVVIAFYNKGRVKDLSLMNMIILFILT 291
Query: 236 LAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQ 268
L G++ +DN AH GF++G L G V L+ Q
Sbjct: 292 LVDGLMSEGIDNVAHAAGFMAGILAGIVLLLVNQ 325
>gi|418931854|ref|ZP_13485689.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713032|gb|EHT37245.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
Length = 470
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 165 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 222
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 223 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 280
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 281 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 328
>gi|71908004|ref|YP_285591.1| rhomboid-like protein [Dechloromonas aromatica RCB]
gi|71847625|gb|AAZ47121.1| Rhomboid-like protein [Dechloromonas aromatica RCB]
Length = 358
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 39/235 (16%)
Query: 45 PAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKE 104
P+++ +++H+ + L P + AN+ +FV M +N
Sbjct: 2 PSLHDQLRHAMPQLH-LTPLLIAANVLIFV-AMLLNGAS--------------------- 38
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
L + T+Q + + WRL + +LH G+ H+L NM +L +G +E+
Sbjct: 39 ---LWHAQNTIQLAWGANFGPATQDGEWWRLGSALFLHFGILHLLLNMAALWDVGQWVER 95
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
+G +R ++Y+ +G G+LLS + + +S GASGA+FG+ G++LS L W ++
Sbjct: 96 MYGTLRFAVIYLTAGLTGNLLSLVANAGAAVSGGASGAIFGIYGALLSYL---WLERSSI 152
Query: 224 H-------FLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFG 270
H F + + G+L P +DN AH+GG+I+G L+G V LIR + G
Sbjct: 153 HRGEFRWLFWAAIGFSGATIIFGLLVPGIDNAAHVGGWIAGVLMG-VLLIRSEPG 206
>gi|82751152|ref|YP_416893.1| hypothetical protein SAB1421c [Staphylococcus aureus RF122]
gi|82656683|emb|CAI81110.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 487
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|418892279|ref|ZP_13446392.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730573|gb|EHT54640.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
Length = 487
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 298 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|258443587|ref|ZP_05691926.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282893050|ref|ZP_06301284.1| peptidase [Staphylococcus aureus A8117]
gi|443635576|ref|ZP_21119704.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
gi|257850993|gb|EEV74936.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282764368|gb|EFC04494.1| peptidase [Staphylococcus aureus A8117]
gi|443409217|gb|ELS67715.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
Length = 487
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|418906494|ref|ZP_13460520.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418928899|ref|ZP_13482785.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377738811|gb|EHT62820.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377763399|gb|EHT87255.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 470
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 165 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 222
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 223 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 280
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 281 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 328
>gi|365157863|ref|ZP_09354108.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
gi|363622533|gb|EHL73692.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
Length = 397
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL + GA ++D + WR T +LH GV H+L N ++L +G +E+ FG R
Sbjct: 208 NTDTLIRFGAKFNPLILDG-EWWRFFTPIFLHIGVLHLLMNTMALYYLGTMVEKIFGRWR 266
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
+Y+ SGF GS+ S +F N+S GASGA+FG G++L N +++ + ++V
Sbjct: 267 FLWIYLFSGFLGSVASFVFT-PNLSAGASGAIFGCFGALLFFGFVNRSLFFRTIGMNVIV 325
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
+I INL G +P +DN HIGG I GFL V + Q W Q
Sbjct: 326 VIIINLIFGFTVPGIDNSGHIGGLIGGFLAAGVSYVPSQRNWSLQ 370
>gi|291561790|emb|CBL40590.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[butyrate-producing bacterium SS3/4]
Length = 206
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 88/153 (57%), Gaps = 4/153 (2%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ V++ + +RL+T ++H G+ HI+ NML L VIG LE+ G ++ + Y++
Sbjct: 42 GAMFAPAVLEDGEYYRLLTAMFMHFGIRHIMNNMLVLFVIGDNLERALGHVKYLIFYLLC 101
Query: 179 GFGGSLLSALFIQSN---ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAIN 235
G G + +S + ++ +S GASGA+FG++G +L + N + + LV++I +
Sbjct: 102 GIGSNWVSMMAHTADTMTVSAGASGAIFGVVGGLLYVVTANRGQLEDLNTRQLVIMIFFS 161
Query: 236 LAVGILPH-VDNFAHIGGFISGFLLGFVFLIRP 267
L +G VDN AH+ G + GF+L + RP
Sbjct: 162 LYLGYTSTGVDNIAHLSGLVIGFVLAIILYHRP 194
>gi|429205379|ref|ZP_19196656.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
gi|428146451|gb|EKW98690.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
Length = 224
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
G + + + M + + + + WRLI +LH G+ H+ NM++L IG +E +G
Sbjct: 43 GSTDIRVLYMFGAKFTPALLQGEWWRLIAAMFLHDGIGHLFINMITLYFIGPEIEDHYGH 102
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITNWTIYTN-KHF 225
R+ ++Y++SG G+LLSA + + ++VGASGALFGL G+ +L T+ I + F
Sbjct: 103 ARMLVIYLLSGLYGNLLSAFWAPTTLAVGASGALFGLFGAYLILGHQSTDAQIQAQARQF 162
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISG 256
L V+ +N+ +G + D H+GG I+G
Sbjct: 163 LLFVI---LNVVLGFSGNTDLAGHVGGLIAG 190
>gi|386831159|ref|YP_006237813.1| hypothetical protein SAEMRSA15_14690 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798923|ref|ZP_12446077.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|418654972|ref|ZP_13216857.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|334275085|gb|EGL93386.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|375038535|gb|EHS31510.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|385196551|emb|CCG16180.1| putative membrane protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|253733201|ref|ZP_04867366.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|417897863|ref|ZP_12541789.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
gi|253728741|gb|EES97470.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|341849365|gb|EGS90508.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|374340237|ref|YP_005096973.1| hypothetical protein Marpi_1272 [Marinitoga piezophila KA3]
gi|372101771|gb|AEX85675.1| putative membrane protein [Marinitoga piezophila KA3]
Length = 235
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 4/178 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+S TL GA + HQ +R IT ++HGG+ HI N+ +L +G +E+ +G +
Sbjct: 40 NSYTLIVAGAQYGKLITIYHQYFRFITALFVHGGILHISFNLYALYYLGNIVERVYGPYK 99
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTL 228
+Y+ SG GG +L+ +FI + SVGASGA+FGL+G + + T K L
Sbjct: 100 FLTIYLASGIGGGILTQIFIPNAFSVGASGAIFGLIGLLFGAGFRDDTPPMLKPMTGTAL 159
Query: 229 VVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALS 285
+ +I INL +G ++NFAHIGG + GF G++ +R + + + ++GY +L+
Sbjct: 160 LPVILINLFLGFTSSGINNFAHIGGLLVGFTFGWLTSVRDTYT-SYKIWKIAGYISLA 216
>gi|456824612|gb|EMF73038.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 226
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 85 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 144
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 145 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 204
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 205 HIGGLVSGTLSGIILF---QFG 223
>gi|418313141|ref|ZP_12924635.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
gi|365236412|gb|EHM77301.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|418430534|ref|ZP_13003445.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387718274|gb|EIK06258.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|384550376|ref|YP_005739628.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302333225|gb|ADL23418.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|258423202|ref|ZP_05686095.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417889989|ref|ZP_12534068.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|418284049|ref|ZP_12896781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|418558986|ref|ZP_13123533.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|418889364|ref|ZP_13443497.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|257846652|gb|EEV70673.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855682|gb|EGS96526.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|365164913|gb|EHM56743.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|371976336|gb|EHO93626.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|377752872|gb|EHT76790.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|221140031|ref|ZP_03564524.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|384862151|ref|YP_005744871.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|302751380|gb|ADL65557.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|49483798|ref|YP_041022.1| hypothetical protein SAR1626 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904131|ref|ZP_06312019.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|282905958|ref|ZP_06313813.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908868|ref|ZP_06316686.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958313|ref|ZP_06375764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295428127|ref|ZP_06820759.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590907|ref|ZP_06949545.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|415682351|ref|ZP_11447667.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887902|ref|ZP_12532021.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|418564826|ref|ZP_13129247.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|418582476|ref|ZP_13146554.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597192|ref|ZP_13160725.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|418601009|ref|ZP_13164457.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|418901054|ref|ZP_13455110.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909401|ref|ZP_13463397.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418923231|ref|ZP_13477147.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982555|ref|ZP_13530263.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986221|ref|ZP_13533906.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49241927|emb|CAG40621.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282327132|gb|EFB57427.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331250|gb|EFB60764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595749|gb|EFC00713.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|283790462|gb|EFC29279.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128485|gb|EFG58119.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575793|gb|EFH94509.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|315195451|gb|EFU25838.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341856931|gb|EGS97758.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|371975963|gb|EHO93255.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|374395428|gb|EHQ66695.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|374400256|gb|EHQ71375.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|377702451|gb|EHT26773.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704265|gb|EHT28575.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704836|gb|EHT29145.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710886|gb|EHT35124.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377735190|gb|EHT59226.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377752048|gb|EHT75972.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|417649370|ref|ZP_12299174.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|440735000|ref|ZP_20914611.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|329728476|gb|EGG64913.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|436431095|gb|ELP28449.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|15924539|ref|NP_372073.1| hypothetical protein SAV1549 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927129|ref|NP_374662.1| hypothetical protein SA1379 [Staphylococcus aureus subsp. aureus
N315]
gi|57651942|ref|YP_186446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87160848|ref|YP_494204.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221664|ref|YP_001332486.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979867|ref|YP_001442126.1| hypothetical protein SAHV_1536 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509778|ref|YP_001575437.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253314920|ref|ZP_04838133.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006335|ref|ZP_05144936.2| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425674|ref|ZP_05602098.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428335|ref|ZP_05604733.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430972|ref|ZP_05607352.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433660|ref|ZP_05610018.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436574|ref|ZP_05612618.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|258437381|ref|ZP_05689365.1| peptidase [Staphylococcus aureus A9299]
gi|258450622|ref|ZP_05698684.1| peptidase [Staphylococcus aureus A5948]
gi|262049127|ref|ZP_06022004.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262051211|ref|ZP_06023435.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|269203177|ref|YP_003282446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|282911187|ref|ZP_06318989.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914356|ref|ZP_06322142.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282916819|ref|ZP_06324577.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282919325|ref|ZP_06327060.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282920098|ref|ZP_06327823.1| peptidase [Staphylococcus aureus A9765]
gi|282924650|ref|ZP_06332318.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|283770625|ref|ZP_06343517.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|284024608|ref|ZP_06379006.1| rhomboid family protein [Staphylococcus aureus subsp. aureus 132]
gi|293503430|ref|ZP_06667277.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510447|ref|ZP_06669153.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|293530987|ref|ZP_06671669.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|294848580|ref|ZP_06789326.1| peptidase [Staphylococcus aureus A9754]
gi|304380862|ref|ZP_07363522.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|384547782|ref|YP_005737035.1| membrane protein [Staphylococcus aureus subsp. aureus ED133]
gi|384870090|ref|YP_005752804.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781834|ref|YP_005758005.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143156|ref|YP_005731549.1| hypothetical protein SATW20_15450 [Staphylococcus aureus subsp.
aureus TW20]
gi|415686263|ref|ZP_11450400.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|416840018|ref|ZP_11903337.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|416845827|ref|ZP_11906228.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|417654442|ref|ZP_12304161.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|417797331|ref|ZP_12444527.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|417892437|ref|ZP_12536486.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|417905331|ref|ZP_12549142.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|418277349|ref|ZP_12891936.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|418285050|ref|ZP_12897750.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|418316423|ref|ZP_12927861.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|418319401|ref|ZP_12930781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|418321319|ref|ZP_12932665.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|418569512|ref|ZP_13133838.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|418574454|ref|ZP_13138623.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|418579474|ref|ZP_13143569.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599967|ref|ZP_13163441.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|418641900|ref|ZP_13204105.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|418645086|ref|ZP_13207214.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|418646803|ref|ZP_13208896.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|418650585|ref|ZP_13212603.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|418658392|ref|ZP_13220120.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|418875489|ref|ZP_13429745.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418903856|ref|ZP_13457897.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418912160|ref|ZP_13466141.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914647|ref|ZP_13468619.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418925809|ref|ZP_13479711.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418948536|ref|ZP_13500834.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|419773145|ref|ZP_14299156.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|421148571|ref|ZP_15608231.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742667|ref|ZP_16796670.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424768990|ref|ZP_18196227.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|424785384|ref|ZP_18212187.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|440707269|ref|ZP_20887968.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443640018|ref|ZP_21124018.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|448743065|ref|ZP_21724979.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
gi|13701347|dbj|BAB42641.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247320|dbj|BAB57711.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|57286128|gb|AAW38222.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87126822|gb|ABD21336.1| peptidase, rhomboid family [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374464|dbj|BAF67724.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722002|dbj|BAF78419.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368587|gb|ABX29558.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271368|gb|EEV03514.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275176|gb|EEV06663.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278402|gb|EEV09038.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281753|gb|EEV11890.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257283925|gb|EEV14048.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|257848586|gb|EEV72574.1| peptidase [Staphylococcus aureus A9299]
gi|257861780|gb|EEV84579.1| peptidase [Staphylococcus aureus A5948]
gi|259160848|gb|EEW45868.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|259162796|gb|EEW47361.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262075467|gb|ACY11440.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|269941039|emb|CBI49423.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282313485|gb|EFB43880.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|282317135|gb|EFB47509.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282319306|gb|EFB49658.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282321537|gb|EFB51862.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282324882|gb|EFB55192.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282594446|gb|EFB99431.1| peptidase [Staphylococcus aureus A9765]
gi|283460772|gb|EFC07862.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|290920255|gb|EFD97321.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095096|gb|EFE25361.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466811|gb|EFF09331.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|294824606|gb|EFG41029.1| peptidase [Staphylococcus aureus A9754]
gi|298694831|gb|ADI98053.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
gi|304340589|gb|EFM06523.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198756|gb|EFU29084.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|320144103|gb|EFW35872.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440447|gb|EGA98159.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|323443221|gb|EGB00839.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|329314225|gb|AEB88638.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329730828|gb|EGG67206.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|334266823|gb|EGL85293.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|341843607|gb|EGS84829.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|341857602|gb|EGS98414.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|364522823|gb|AEW65573.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172061|gb|EHM62806.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|365173639|gb|EHM64128.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|365225551|gb|EHM66794.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|365240520|gb|EHM81292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|365241107|gb|EHM81862.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|371979181|gb|EHO96416.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|371985641|gb|EHP02702.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|374395556|gb|EHQ66819.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|375018355|gb|EHS11935.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|375023919|gb|EHS17364.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|375027871|gb|EHS21229.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|375032097|gb|EHS25352.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|375038662|gb|EHS31625.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|375371869|gb|EHS75629.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|377697501|gb|EHT21856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377722417|gb|EHT46543.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377742871|gb|EHT66856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744878|gb|EHT68855.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377758149|gb|EHT82037.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769561|gb|EHT93329.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383972969|gb|EID88990.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|394331714|gb|EJE57797.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348381|gb|EJU83373.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|408423672|emb|CCJ11083.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425662|emb|CCJ13049.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427649|emb|CCJ15012.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429638|emb|CCJ26803.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431625|emb|CCJ18940.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433619|emb|CCJ20904.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435611|emb|CCJ22871.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437595|emb|CCJ24838.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|421956794|gb|EKU09123.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|436506025|gb|ELP41864.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443406293|gb|ELS64877.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|445563752|gb|ELY19909.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
Length = 487
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|384867478|ref|YP_005747674.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|417901080|ref|ZP_12544957.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|418652792|ref|ZP_13214755.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|418955633|ref|ZP_13507570.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
gi|312437983|gb|ADQ77054.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|341846239|gb|EGS87436.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|375020960|gb|EHS14467.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|375370719|gb|EHS74517.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
Length = 426
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 121 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 178
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 179 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 235
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 236 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 284
>gi|296275094|ref|ZP_06857601.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MR1]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 298 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|340372015|ref|XP_003384540.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 876
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 12/223 (5%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
KV D Q +RL+T +LH G+ H++ + + +E+ G++R L+Y+ SG GG++
Sbjct: 646 KVPD--QFYRLLTSLFLHAGIIHLVFTLTFHFFVLRHVEKYLGWLRTSLIYLGSGLGGNI 703
Query: 185 LSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILP 242
+SA+F+ N VG +G +FG++ L ++ T K L L++II I L G+ P
Sbjct: 704 VSAVFVPYNPEVGPAGGIFGIISFFLIYIMYQAHRLTKPWKEALKLLIIIIILLCCGLFP 763
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLV 302
+DNFAH GGF+ G L + + P + ++ L+ Y +R++ ++ + + ++
Sbjct: 764 FIDNFAHFGGFLFGTLWSGILV--PYYQPLDAE--LAYYRDKHKREYNPWKDWIQVSKIL 819
Query: 303 LVIVGLTLGLVMLLRGVD----ANDHCSWCHYLSCVPTSRWSC 341
+ +G + +++ L D +L+C+P +R C
Sbjct: 820 FIFIGTPVLILLYLLFFLIFYVEQDTWDGFRFLNCIPFTRTFC 862
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 8/173 (4%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
PS TL + + ++ + WR+ + +LH G H+ NM SL + G LE+ G
Sbjct: 35 PSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKA 94
Query: 170 RVGLLYIISGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTL 228
R +Y++SG G++ + +F S+ S+GASGA+FG+ G+ + + +T T L
Sbjct: 95 RFITIYLVSGIVGNMATYIFYDSSYASLGASGAIFGIFGAFGA--LVYYTRRTMPMLRKL 152
Query: 229 VV-IIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQ--FGWVEQRYA 277
++ II I++ + L P+V+ FAH+GG ++GF+LG V+L P+ W +Q+ A
Sbjct: 153 ILPIIVISVIMTFLQPNVNVFAHLGGLVTGFILGLVYL-HPKRILSWRKQKMA 204
>gi|253682458|ref|ZP_04863255.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
gi|253562170|gb|EES91622.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
Length = 200
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RLITC +LHGG+ H++ NM +L +G +E+ +G + ++Y++ G S +S+
Sbjct: 61 QYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGGL-ISSISSFIF 119
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAH 249
+ +S+GASGA+F LLG++L I ++ ++ +I +N+ +G+ +P++DNFAH
Sbjct: 120 SNGVSIGASGAIFSLLGAILVLTIKMRSVVGKDTIKNVISVIVVNIFIGLAIPNIDNFAH 179
Query: 250 IGGFISGFLL 259
+GG + G L
Sbjct: 180 VGGLLGGVFL 189
>gi|86159216|ref|YP_466001.1| rhomboid-like protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775727|gb|ABC82564.1| Rhomboid-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 360
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L +MGALD ++V D + WRL+T +LH G H++ N+ + + +E+ G R ++
Sbjct: 48 LARMGALDHARVWDG-EPWRLLTAAFLHVGPVHLVWNLAFGVPLCALVERAIGTRRFLVV 106
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS---ELITNWTIYTNKHFLTL--V 229
Y+ S GGS S + +S GASGALFG+ G+ML+ + +W + + + L +
Sbjct: 107 YLASALGGSAAS-MLAAMPMSAGASGALFGVAGAMLALYRRAVGSWRAFLSSRDIILNGI 165
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+++A LA LP +D +AH GG ++G LG+V
Sbjct: 166 MLVAFALAGLFLP-IDGWAHAGGLVTGAWLGWV 197
>gi|339441829|ref|YP_004707834.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
gi|338901230|dbj|BAK46732.1| hypothetical protein CXIVA_07650 [Clostridium sp. SY8519]
Length = 218
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 5/147 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ V D + +RL+T ++LH G+ H++ NM+ L +G LE+ FG I+ + Y
Sbjct: 54 GAMYPDAVFDSGEWYRLLTSSFLHFGISHLVNNMVMLFCLGSYLEKAFGRIKYAVFYAAV 113
Query: 179 GFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
SL S+ ++ +S GASGA+FG++G++L ++ N + + ++++A+
Sbjct: 114 CVFSSLASSWWMLQQDSPAVSGGASGAIFGIIGALLWIILRNHGRFRDMDLRRFLIMLAL 173
Query: 235 NLAVGI-LPHVDNFAHIGGFISGFLLG 260
+L G VDN AHIGG I GFLLG
Sbjct: 174 SLYYGFTTADVDNAAHIGGLIFGFLLG 200
>gi|21283230|ref|NP_646318.1| hypothetical protein MW1501 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486385|ref|YP_043606.1| hypothetical protein SAS1487 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253732202|ref|ZP_04866367.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207732|ref|ZP_06924167.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911813|ref|ZP_07129256.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418934519|ref|ZP_13488341.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988616|ref|ZP_13536288.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|448740624|ref|ZP_21722600.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
gi|21204670|dbj|BAB95366.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244828|emb|CAG43288.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253723991|gb|EES92720.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887749|gb|EFH26647.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886059|gb|EFK81261.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|377717709|gb|EHT41884.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377770613|gb|EHT94374.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|445548591|gb|ELY16841.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|148268033|ref|YP_001246976.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394101|ref|YP_001316776.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257793625|ref|ZP_05642604.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|258411075|ref|ZP_05681355.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|258420121|ref|ZP_05683076.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|258446794|ref|ZP_05694948.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|258448708|ref|ZP_05696820.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|258453525|ref|ZP_05701503.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282928182|ref|ZP_06335787.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|295406672|ref|ZP_06816477.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297245746|ref|ZP_06929611.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|384864770|ref|YP_005750129.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387150692|ref|YP_005742256.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|415692667|ref|ZP_11454587.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|417651337|ref|ZP_12301100.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|418424698|ref|ZP_12997812.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427692|ref|ZP_13000697.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433677|ref|ZP_13006269.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437172|ref|ZP_13008968.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440072|ref|ZP_13011773.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443090|ref|ZP_13014689.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446152|ref|ZP_13017626.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418449166|ref|ZP_13020552.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451979|ref|ZP_13023313.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454973|ref|ZP_13026232.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457851|ref|ZP_13029050.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418640342|ref|ZP_13202574.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|418878467|ref|ZP_13432702.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881233|ref|ZP_13435450.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884081|ref|ZP_13438274.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418895312|ref|ZP_13449407.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418991477|ref|ZP_13539138.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784633|ref|ZP_14310396.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|147741102|gb|ABQ49400.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946553|gb|ABR52489.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257787597|gb|EEV25937.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|257840225|gb|EEV64689.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|257843832|gb|EEV68226.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|257854369|gb|EEV77318.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|257857986|gb|EEV80875.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|257864256|gb|EEV87006.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282589989|gb|EFB95071.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|285817231|gb|ADC37718.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|294968419|gb|EFG44443.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297177397|gb|EFH36649.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|312829937|emb|CBX34779.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129827|gb|EFT85817.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329727521|gb|EGG63977.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|375014906|gb|EHS08577.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|377694589|gb|EHT18954.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695118|gb|EHT19482.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377714416|gb|EHT38617.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377723599|gb|EHT47724.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377730976|gb|EHT55034.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|383363843|gb|EID41169.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|387717980|gb|EIK05975.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387719477|gb|EIK07422.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387724901|gb|EIK12532.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387727160|gb|EIK14692.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730222|gb|EIK17629.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735290|gb|EIK22419.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736766|gb|EIK23854.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387736929|gb|EIK24015.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387744860|gb|EIK31624.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745026|gb|EIK31788.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746619|gb|EIK33348.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|326930681|ref|XP_003211471.1| PREDICTED: rhomboid family member 2-like [Meleagris gallopavo]
Length = 821
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G++R+ +++I+SG G+L SA+F+
Sbjct: 618 QIYRLWLSLFLHAGIIHCLVSVTFQMTVLRDLEKLAGWLRISIIFILSGITGNLASAIFL 677
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W K L L I+ G+LP +DN A
Sbjct: 678 PYRAEVGPAGSQFGLLACLFVELFQSWQALEKPWKALLNLSGIVLFLFVCGLLPWIDNIA 737
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
H+ GF+SG LL F FL FG +++ R++ M IVSL LV +GL
Sbjct: 738 HLFGFLSGLLLSFAFLPYITFGTMDK----------YRKRAMI------IVSL-LVFLGL 780
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
L + L N W YL+C+P TS++ + E
Sbjct: 781 FTSLFIWLYVYPIN--WRWIEYLTCLPFTSKFCEKYE 815
>gi|227544150|ref|ZP_03974199.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|338202576|ref|YP_004648721.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
gi|154705524|gb|ABS84188.1| rhomboid family protein [Lactobacillus reuteri]
gi|227185866|gb|EEI65937.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|336447816|gb|AEI56431.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
Length = 219
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++VTL MGA + ++ + + WRL++ +LH G+ H++ N ++LL IG +E+ FG R
Sbjct: 34 NTVTLLNMGARS-TPLIREGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI---TNWTIYTNKHFLT 227
+ ++Y +S F G+L SA+F+ S +S GAS A+FGL G+ L + N +
Sbjct: 93 MVIIYFVSAFFGNLTSAVFMPSTVSAGASTAIFGLFGAFLMLGVCFHHNVIVRVLSRTFL 152
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
L VII I + L VD HIGG GF + F+
Sbjct: 153 LFVIINIVMDF-FLSGVDLVGHIGGLFGGFFIAFI 186
>gi|395238215|ref|ZP_10416153.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477919|emb|CCI86130.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 230
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 14/161 (8%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
++ TL ++GA++ V Q WRL T +LH G+ H+++N + + +G+ LE G I
Sbjct: 33 ENTATLIRLGAMNNYTVAAAGQWWRLFTAQFLHIGIMHLVSNAVMIYYLGMFLEPLLGHI 92
Query: 170 RVGLLYIISGFGGSLLS-ALFIQSNISVGASGALFGLLGSMLSELITNWT---------I 219
R +Y+ISG GG+LLS AL +IS GAS ALFGL G++++ + N T
Sbjct: 93 RFLAVYLISGIGGNLLSFALGDDRSISAGASTALFGLFGALIAVGVRNATSVEGSNSLIS 152
Query: 220 YTNKHFLTLVVI-IAINLAVGILPHVDNFAHIGGFISGFLL 259
Y ++ L +I I ++L +P++D H+GG +G +L
Sbjct: 153 YISRQAFVLALINIGLDL---FIPNIDLQGHLGGLFTGAML 190
>gi|379795908|ref|YP_005325906.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872898|emb|CCE59237.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R+IT +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIITSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+G++ + + + T NK L
Sbjct: 240 RMLGIYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGAIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV++I ++L + +++ AHIGGF+ G L+G+ F + + W+
Sbjct: 298 MIALVILIGVSL---FMSNINIVAHIGGFVGGLLITLIGYYFNVNRKLFWI 345
>gi|418327645|ref|ZP_12938790.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232769|gb|EHM73752.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
Length = 234
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 34/184 (18%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 48 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 92
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++YIISG G+ +S F S ISVGASGA+FGL+G
Sbjct: 93 ILMNMLSLFIFGKIVESIIGSWRMLIIYIISGLYGNFVSLSFNTSTISVGASGAIFGLIG 152
Query: 208 SMLSELITNWTIYTNKHF---------LTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
S+ +Y +K+F + LVV+I +L + +++ AH+GGFISG L
Sbjct: 153 SIFV------IMYLSKNFNKKMIGQLLIALVVLIGFSL---FMSNINIMAHLGGFISGVL 203
Query: 259 LGFV 262
+ +
Sbjct: 204 ITLI 207
>gi|259503580|ref|ZP_05746482.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168453|gb|EEW52948.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 219
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L + GAL + V + WRL+T ++H G H+L N ++L IG+ +EQ FG R+ +
Sbjct: 37 VLIRFGALQAAAV-QAGEWWRLLTPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWRMLV 95
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML---SELITNWTI-YTNKHFLTLV 229
+Y+ S G+LLSA ++ + IS GAS +FGL G+ + + N + ++ FL LV
Sbjct: 96 IYLGSAIVGNLLSAYWLPAGISAGASTGIFGLFGAFIMLGATFRENQALRMLSRQFLILV 155
Query: 230 VI-IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
V+ IA +L V P +D H+GGFI GFLL ++
Sbjct: 156 VLNIATDLMV---PGIDLAGHLGGFIGGFLLAYL 186
>gi|418695529|ref|ZP_13256548.1| peptidase, S54 family [Leptospira kirschneri str. H1]
gi|409956614|gb|EKO15536.1| peptidase, S54 family [Leptospira kirschneri str. H1]
Length = 514
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 373 QWWRLLTNVFVHASFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 432
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + + +K + +V I L G+ +DN +
Sbjct: 433 PNTISVGASGAIFGLYGAILGLVLMDAFLRDDKKNVLIMIVTFILTGLLWGLFGGIDNAS 492
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG + G +LG + QFG
Sbjct: 493 HIGGLVGGTILGIILF---QFG 511
>gi|416361193|ref|ZP_11682501.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
gi|338194390|gb|EGO86853.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
Length = 200
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RLITC +LHGG+ H++ NM +L +G +E+ +G + ++Y++ G S +S+
Sbjct: 61 QYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGGL-ISSISSFIF 119
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAH 249
+ +S+GASGA+F LLG++L I ++ ++ +I +N+ +G+ +P++DNFAH
Sbjct: 120 SNGVSIGASGAIFSLLGAILVLTIKMRSVVGKDTIKNVISVIVVNIFIGLAIPNIDNFAH 179
Query: 250 IGGFISGFLL 259
+GG + G L
Sbjct: 180 VGGLLGGVFL 189
>gi|418920630|ref|ZP_13474562.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377764356|gb|EHT88209.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
Length = 370
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 65 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 122
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 123 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 180
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 181 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 228
>gi|386729250|ref|YP_006195633.1| integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|387602889|ref|YP_005734410.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478900|ref|YP_006710330.1| hypothetical protein C248_1592 [Staphylococcus aureus 08BA02176]
gi|418309989|ref|ZP_12921539.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|418978272|ref|ZP_13526073.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|283470827|emb|CAQ50038.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237446|gb|EHM78292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|379993888|gb|EIA15333.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|384230543|gb|AFH69790.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|404440389|gb|AFR73582.1| putative membrane protein [Staphylococcus aureus 08BA02176]
Length = 487
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNVFWI 345
>gi|187776993|ref|ZP_02993466.1| hypothetical protein CLOSPO_00538 [Clostridium sporogenes ATCC
15579]
gi|187773921|gb|EDU37723.1| peptidase, S54 family [Clostridium sporogenes ATCC 15579]
Length = 344
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 14/153 (9%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + +RLIT +LHGG+ H+ NM +L IG +E FG ++ ++Y ISG
Sbjct: 193 VNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIYFGKVKYLIIYFISGILS 252
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN-----KHFL-TLVVIIAINL 236
S S LF S +S+GASGA+FG LG+ T Y N K FL ++ +I INL
Sbjct: 253 SYFSYLFSSS-VSIGASGAIFGTLGA------TFIIAYKNRKRGGKEFLNNIISVIVINL 305
Query: 237 AVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+G +P+VDNF HIGG I G ++ + + R Q
Sbjct: 306 ILGFSIPNVDNFGHIGGLIGGVIVTLLLMNRAQ 338
>gi|418670564|ref|ZP_13231935.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|421121687|ref|ZP_15581980.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410345538|gb|EKO96634.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410753946|gb|EKR15604.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
Length = 226
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 85 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 144
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 145 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 204
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 205 HIGGLVSGTLSGIILF---QFG 223
>gi|422746158|ref|ZP_16800091.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320140566|gb|EFW32420.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 487
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 297
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 298 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNLNIFWI 345
>gi|225375145|ref|ZP_03752366.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
gi|225213019|gb|EEG95373.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
Length = 357
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 31 VEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCV 90
+E MD Q A P KHS + ++ +ANI +++I
Sbjct: 142 IEHMDVQQNSRASAPV---SGKHSIMQLPFVTGLIALANILVYII--------------- 183
Query: 91 ARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILA 150
SF E+ S GA+ + HQ WRL+T +LH GV H++
Sbjct: 184 ------LSFGGATEDAFYMASR------GAMYPEFLTINHQWWRLLTAMFLHFGVAHLMN 231
Query: 151 NMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI----QSNISVGASGALFGLL 206
NM+ +G RLE+ G ++ ++Y +G GG LLS + + +S GASGA+FG++
Sbjct: 232 NMVIFCCVGSRLEKYIGHWKMAVVYFAAGIGGGLLSYIMMLLSGNYAVSGGASGAVFGVI 291
Query: 207 GSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNFAHIGGFISGFL 258
G +L +I + ++++I ++L G VDN+ H+GG + GFL
Sbjct: 292 GGLLWVVIYHRGKLEGMTTKGILIMIVLSLYFGFTSIGVDNWCHVGGMLCGFL 344
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 10/170 (5%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
G +S+ + V+ ++ + Q WRLIT +LH G HI NM++L +G +LE FG
Sbjct: 37 GSTSLNVLVAFGAKVNPLIQQGQWWRLITPMFLHIGFTHIFLNMVTLYFVGTQLEAAFGH 96
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITNWTIYTN--KH 224
R ++++++G GG++ S F+ S +S GAS A+FGL G+ ML E I +
Sbjct: 97 ARFLIIFLVAGIGGNVASFCFLNS-LSAGASTAIFGLFGAFMMLGESFWQNPIIRQLART 155
Query: 225 FLTLVVI-IAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE 273
FL VV+ IA +L P +D H+GG I+GFL+ + + PQ G V
Sbjct: 156 FLAFVVMNIAFDL---FTPGIDLAGHLGGLIAGFLVAYTVGV-PQIGRVS 201
>gi|379014757|ref|YP_005290993.1| putative rhomboid family protein, truncated, partial
[Staphylococcus aureus subsp. aureus VC40]
gi|374363454|gb|AEZ37559.1| putative rhomboid family protein, truncated [Staphylococcus aureus
subsp. aureus VC40]
Length = 423
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 14/156 (8%)
Query: 120 ALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
A+ S + + Q +R ++ +LHGG+ H+ NM +L ++G LEQ G R L+++S
Sbjct: 136 AMAFSAAIGEVQPYRFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSA 195
Query: 180 FGGSLLSALFIQSNIS-------VGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
GGS + L + +S VGASGA+FGL +++ L + T ++ ++V+I
Sbjct: 196 IGGS-VGYLLLADPLSRAWTIPVVGASGAVFGLFAAIVFVLRS-----TGRNASQILVLI 249
Query: 233 AINLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRP 267
AIN+ +G ++P + AH+GG ++G LL F+ P
Sbjct: 250 AINVVIGFVVPGIAWQAHLGGMVTGALLAVAFVYAP 285
>gi|45658531|ref|YP_002617.1| hypothetical protein LIC12696 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421085386|ref|ZP_15546239.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|421103683|ref|ZP_15564280.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601774|gb|AAS71254.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410366646|gb|EKP22037.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432022|gb|EKP76380.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|456984467|gb|EMG20522.1| peptidase, S54 family [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 239
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 98 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 157
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 158 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 217
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 218 HIGGLVSGTLSGIILF---QFG 236
>gi|291548753|emb|CBL25015.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus torques L2-14]
Length = 206
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 17/151 (11%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ +++ + +RL T +LH G+ H+L NM+ L +G E+E G IR Y IS
Sbjct: 40 GAMYEPYIIENQEYYRLFTSLFLHFGISHLLNNMVLLWALGSIFEKEAGKIRFLFCYFIS 99
Query: 179 GFGGSLLS----ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL------TL 228
G GG+LLS + + +S GASGA+FGL+G +L W ++ N+ L +
Sbjct: 100 GIGGNLLSLYWNIMHDRQIVSAGASGAIFGLMGGLL------WIVFANRGRLGTLSGRGM 153
Query: 229 VVIIAINLAVGILPH-VDNFAHIGGFISGFL 258
++++ ++L G VDN AH+GG I GFL
Sbjct: 154 LIMVVLSLYFGFTSTGVDNLAHVGGLICGFL 184
>gi|418576075|ref|ZP_13140221.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325137|gb|EHY92269.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 489
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 20/174 (11%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
S + L +G L VV H W RLIT +LH HIL NMLSL + G +E G
Sbjct: 184 SSDLKLLDVGGLVHFNVV--HGEWYRLITSIFLHYNFEHILMNMLSLFIFGKIVESIVGH 241
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--- 225
R+ ++Y+++G G+ S F +SVGASGA+FGL+G++ + +Y K F
Sbjct: 242 WRMFVIYLVAGLFGNFASLSFNTDTVSVGASGAIFGLIGAIFT------FMYIGKQFNRK 295
Query: 226 ----LTLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
L +V++I I L++ + +++ AHIGGFI G L+G+ F W+
Sbjct: 296 LIGQLLIVLVIMIGLSL-FMQNINIVAHIGGFIGGLLITLMGYYFKTNKTRFWI 348
>gi|326792345|ref|YP_004310166.1| peptidase S9 prolyl oligopeptidase active site domain-containing
protein [Clostridium lentocellum DSM 5427]
gi|326543109|gb|ADZ84968.1| Peptidase S54, rhomboid domain [Clostridium lentocellum DSM 5427]
Length = 518
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + + WR IT +LHG + H+L N SL +IG +E+ +G R Y+I+G G
Sbjct: 221 VNNLILEGEYWRFITPIFLHGSLMHLLVNCYSLYIIGSLVERLYGRGRFITSYLIAGILG 280
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLS---ELITNWTIYTNKHFLTLVVIIAINLAVG 239
+L S LF+ SVGASGA+FGL+G +L E + +Y +T ++ INL G
Sbjct: 281 NLCSFLFVPGP-SVGASGAIFGLMGILLYFGLERPLQFKVYFGSSIITTIL---INLVYG 336
Query: 240 ILPH-VDNFAHIGGFISGFL 258
+DNFAH+GG I GFL
Sbjct: 337 FSSTGIDNFAHLGGLIGGFL 356
>gi|421186400|ref|ZP_15643793.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
gi|399967353|gb|EJO01835.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
Length = 241
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPS + +G VS ++ K Q +RL T +LH + HI +NM +L++ G +E+ FG
Sbjct: 50 GPSIQSSILLGG-QVSSLILKGQWYRLFTPIFLHSSLMHIFSNMFTLIIFGPFVEKLFGK 108
Query: 169 IRVGLLYIISGFGGSLLSALFIQSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
+ L+Y++SG G+LL+ +F + +SVGASGALFGL G+M+S W N F
Sbjct: 109 TKYLLIYLLSGLWGNLLTLIFDPNPNIVSVGASGALFGLFGAMIS---IAWFNRNNPIFK 165
Query: 227 TLVVIIA----INLAVGILPH-VDNFAHIGGFISGFLLGFV 262
+V+ A NL I VD +AHIGG ISG L V
Sbjct: 166 RQLVVFAALALFNLISNIGDQSVDIWAHIGGLISGILTSLV 206
>gi|219124310|ref|XP_002182450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406411|gb|EEC46351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 522
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NP++GP + G + + +++Q WRL+T ++LH GV H+LAN L ++ EQ
Sbjct: 298 NPMIGPYPDAFSEWGGKNAYLMTEENQWWRLLTSSFLHVGVLHLLANALCVIWSVAVFEQ 357
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELIT------NWT 218
E+G R L++++S G + ++L I VG+SG L GL + L+++++ + +
Sbjct: 358 EWGSCRWLLVFLVSSVGCTACASLGDADTIGVGSSGTLMGLYAAKLAQVMSCTCFEVHKS 417
Query: 219 IYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
+ N H+ + ++ + + IL + + H+GG ++GFL+G +
Sbjct: 418 LDGNIHYDRMCGVL---VGIAILSML-SACHVGGLVTGFLVGILIF 459
>gi|73662516|ref|YP_301297.1| hypothetical protein SSP1207 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495031|dbj|BAE18352.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 485
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RLIT +LH HIL NMLSL + G +E G
Sbjct: 181 SDLKLLDIGGLVHFNVV--HGEWYRLITSIFLHYNFEHILMNMLSLFIFGKIVESIVGHW 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF---- 225
R+ ++Y+++G G+ S F +SVGASGA+FGL+G++ + +Y K F
Sbjct: 239 RMFVIYLVAGLFGNFASLSFNTDTVSVGASGAIFGLIGAIFT------FMYIGKQFNRKL 292
Query: 226 ---LTLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
L +V++I I L++ + +++ AHIGGFI G L+G+ F W+
Sbjct: 293 IGQLLIVLVIMIGLSL-FMQNINIVAHIGGFIGGLLITLMGYYFKTNKTRFWI 344
>gi|418886814|ref|ZP_13440962.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377725767|gb|EHT49880.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
Length = 314
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 9 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 66
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 67 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 124
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
LV+++ ++L + +++ AHIGGFI G L+G+ + + W+
Sbjct: 125 LIALVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 172
>gi|83745575|ref|ZP_00942633.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
gi|83727652|gb|EAP74772.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
Length = 569
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL P SV G + + V + WRL++ +LH GV H+ NM+ L GI +E+
Sbjct: 228 NPLQTPISVLFSLGG--NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 285
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTIYT-- 221
+G L+Y+ +G GS LS F Q I VGASGA+FG+ G+ L + +
Sbjct: 286 IYGPAAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMPQT 345
Query: 222 -NKHFLT-LVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
+K LT L + + +LA G+ P VDN AHIGG + G +L + R
Sbjct: 346 LSKRLLTQLGLFVLYSLAQGLTKPGVDNAAHIGGLVGGCMLAMILPAR 393
>gi|260587072|ref|ZP_05852985.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|331082843|ref|ZP_08331965.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542562|gb|EEX23131.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|330400172|gb|EGG79821.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 220
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
V+ H+ +RLI+ +LH G+ H+ NML LL +G LE+ G I+ L+Y + G G ++L
Sbjct: 69 VLQSHEYYRLISSMFLHFGIQHLGNNMLVLLFLGDCLERNIGKIKYLLIYFLGGIGANVL 128
Query: 186 SALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
S N IS GASGA+F ++G+++ +I N N L+V+ ++L G+
Sbjct: 129 SIYLEIKNGKYFISAGASGAVFAVIGALIYIVIANRGRIENFTTRQLIVMAGLSLYFGMT 188
Query: 242 PH-VDNFAHIGGFISGFLL 259
VDN AH GG ISGF+L
Sbjct: 189 STGVDNAAHFGGLISGFIL 207
>gi|322390373|ref|ZP_08063896.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
gi|321142914|gb|EFX38369.1| rhomboid family protein [Streptococcus parasanguinis ATCC 903]
Length = 225
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDN 246
A+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 113 AIFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLIVVNLIFSFMPGISM 172
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
HIGG ++G +L +VF +R + ++ + Y +
Sbjct: 173 AGHIGGLVAGLMLAYVFPVRGEARFMNRTYQI 204
>gi|419800122|ref|ZP_14325427.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
gi|385696180|gb|EIG26685.1| peptidase, S54 family [Streptococcus parasanguinis F0449]
Length = 225
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDN 246
A+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 113 AIFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLIVVNLIFSFMPGISM 172
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRY 276
HIGG ++G +L +VF +R + ++ + Y
Sbjct: 173 AGHIGGLVAGLMLAYVFPVRGEARFMNRTY 202
>gi|374374022|ref|ZP_09631681.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
gi|373233464|gb|EHP53258.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
Length = 490
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
+L P + +L GA + + + Q WRL+T +LH G+FH+L NM +LL IG+ LE
Sbjct: 177 ILMPDNESLLNWGA-NFRPITLEGQWWRLLTNCFLHVGIFHLLLNMYALLYIGVLLEPLL 235
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
G R Y+++G S+ S + IS GASGA+FG+ G L+ L TN T + L
Sbjct: 236 GRTRFISAYLLTGITASITSLWWHDLTISAGASGAIFGMYGVFLAMLTTNLIEKTARKPL 295
Query: 227 --TLVVIIAINLAVGILPHVDNFAH 249
++ V + NL G+ +DN AH
Sbjct: 296 LTSIAVFVGYNLIYGLKGGIDNAAH 320
>gi|197123290|ref|YP_002135241.1| rhomboid family protein [Anaeromyxobacter sp. K]
gi|196173139|gb|ACG74112.1| Rhomboid family protein [Anaeromyxobacter sp. K]
Length = 360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L +MGALD ++V D WRL+T +LH G H+L N+ + + +E+ G R +
Sbjct: 48 LARMGALDHARVWDGEP-WRLLTAAFLHVGPVHLLWNLAFGVPLCAVVERAIGTRRFLAV 106
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS---ELITNWTIYTNKHFLTLVVI 231
Y+ S GGS S L +S GASGALFG+ G+ML+ + +W + + L I
Sbjct: 107 YLASALGGSAAS-LLAAMPMSAGASGALFGVAGAMLALYRRAVGSWRAFLASRDIILNGI 165
Query: 232 IAINLAV-GILPHVDNFAHIGGFISGFLLGFV 262
+ + A+ G+ +D +AH GG ++G LG++
Sbjct: 166 LLVGFALAGLFLPIDGWAHAGGLVTGAWLGWI 197
>gi|337282820|ref|YP_004622291.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
gi|335370413|gb|AEH56363.1| rhomboid family protein [Streptococcus parasanguinis ATCC 15912]
Length = 225
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDN 246
A+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 113 AIFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLIVVNLIFSFMPGISM 172
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
HIGG ++G +L +VF +R + ++ + Y +
Sbjct: 173 SGHIGGLVAGVMLAYVFPVRGEARFMNRTYQM 204
>gi|170761626|ref|YP_001785737.1| membrane associated peptidase [Clostridium botulinum A3 str. Loch
Maree]
gi|169408615|gb|ACA57026.1| putative membrane associated peptidase [Clostridium botulinum A3
str. Loch Maree]
Length = 341
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 14/132 (10%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + +RLIT +LHGG+ H+ NM +L IG +E FG ++ ++Y ISG
Sbjct: 193 VNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIYFGKVKYLIIYFISGILS 252
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN-----KHFL-TLVVIIAINL 236
S S LF +++S+GASGA+FG+LG+ L YTN K FL ++ +I +NL
Sbjct: 253 SYFSYLF-SASVSIGASGAIFGILGATL------IIAYTNRKKGGKEFLNNIISVIVVNL 305
Query: 237 AVGI-LPHVDNF 247
+G +P+VDNF
Sbjct: 306 ILGFSIPNVDNF 317
>gi|304403852|ref|ZP_07385514.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
gi|304346830|gb|EFM12662.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
Length = 204
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 38/213 (17%)
Query: 66 VVANIAMFVITMYVNNCPKNSVSCVARFLGRF-SFQPFKENPLLGPSSVTLQKMGALDVS 124
V NI MF+ITM +N ++ + L RF +F +++P LD
Sbjct: 23 VAINIVMFIITM-LNGGSEDGYT-----LYRFGAFLQTEDDPF------------GLD-- 62
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
+ WR +T +LH G H+ N++SL++ LE+ G +R GL +I++G G+L
Sbjct: 63 ------EPWRYVTAIFLHAGFMHLFYNLISLIIFAPPLERLLGHVRYGLFFIVTGVVGNL 116
Query: 185 LSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-P 242
SALF + SVGASGA++G+ G+ L + T+ I+ L L P
Sbjct: 117 FSALFHHGEVLSVGASGAIYGVYGAFLFLSVFGKHRLDEGSRKTVYSILIFGLIYSFLVP 176
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
++ +AH+GG I+GF+L +GW E++
Sbjct: 177 TINIWAHVGGGIAGFVL---------YGWFERK 200
>gi|302531387|ref|ZP_07283729.1| predicted protein [Streptomyces sp. AA4]
gi|302440282|gb|EFL12098.1| predicted protein [Streptomyces sp. AA4]
Length = 320
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
+ L + ++ +G L + + WR+ T +LH G HI AN SL ++G L
Sbjct: 105 QAKSLFDNGAARIEMLGELWTYPALGGGEWWRIFTSGFLHYGPIHIAANAFSLWMMGRAL 164
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYT 221
EQ FG R LY +S FG S LF N S GASGA+FGLLGS + ++ +
Sbjct: 165 EQVFGKSRFLALYFVSMFGASTAVLLFDAPNRPSAGASGAIFGLLGSY-AVIVLKLRLNP 223
Query: 222 NKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+ LV+ + + P + AH+GG ++G L+ L P+
Sbjct: 224 TALLINLVINAYVTFTI---PQISILAHVGGLVTGALVAAAILYAPE 267
>gi|312870529|ref|ZP_07730647.1| peptidase, S54 family [Lactobacillus oris PB013-T2-3]
gi|311093926|gb|EFQ52252.1| peptidase, S54 family [Lactobacillus oris PB013-T2-3]
Length = 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L + GAL S + + WRLIT ++H G H+L N ++L IG+ +EQ FG R+ +
Sbjct: 33 VLLRFGALQ-SAALQAGEWWRLITPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWRLLI 91
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML---SELITNWTI-YTNKHFLTLV 229
+Y+ S G+L+SA ++ + IS GAS +FGL G+ + + N + ++ FL LV
Sbjct: 92 IYLGSAVVGNLMSAYWLPAGISAGASTGIFGLFGAFIMLGASFRENQALRMLSRQFLILV 151
Query: 230 VI-IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
V+ I +L V P +D H+GGFI GFLL ++
Sbjct: 152 VLNIVTDLMV---PGIDLAGHLGGFIGGFLLAYL 182
>gi|418952134|ref|ZP_13504176.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
gi|375369792|gb|EHS73653.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
Length = 303
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 121 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 178
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--- 226
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 179 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLGQL 236
Query: 227 --TLVVIIAINLAVGILPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSGY 281
+LV+++ ++L + +++ AHIGGFI G L+G+ + + W+ L +
Sbjct: 237 LISLVILVGVSL---FMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWILLIGMLVIF 293
Query: 282 SALSRRKF 289
AL R F
Sbjct: 294 IALQIRIF 301
>gi|387880413|ref|YP_006310716.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
gi|386793861|gb|AFJ26896.1| rhomboid family membrane protein [Streptococcus parasanguinis
FW213]
Length = 225
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
VD Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++
Sbjct: 53 VDPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFV 112
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDN 246
A+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 113 AIFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLIVVNLIFSFMPGISM 172
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
HIGG ++G +L +VF +R + ++ + Y +
Sbjct: 173 SGHIGGLVAGVMLAYVFPVRGEARFMNRTYQM 204
>gi|373108079|ref|ZP_09522370.1| hypothetical protein HMPREF9623_02034 [Stomatobaculum longum]
gi|371650245|gb|EHO15713.1| hypothetical protein HMPREF9623_02034 [Stomatobaculum longum]
Length = 206
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA + + H+ WRL+T +LH G+ H+ NML L V G LE G ++ +
Sbjct: 39 LLRYGASYTPYIFENHEYWRLLTAAFLHFGIRHLGNNMLVLFVTGDSLEHALGHVKYLIF 98
Query: 175 YIISGFGGSLLS----ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
Y+ S G S S Q +S GASGA+F +LG ++ LI N + L+
Sbjct: 99 YLFSAVGASAASLAVEVAMGQKVLSAGASGAVFAVLGGLIWVLIRNSGRFEEFRIRNLLF 158
Query: 231 IIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRP 267
+ L G VDN AH GG + GFLL V RP
Sbjct: 159 FSGMMLLSGFFTEGVDNAAHAGGLLVGFLLAVVLYRRP 196
>gi|424826465|ref|ZP_18251350.1| S54 family peptidase [Clostridium sporogenes PA 3679]
gi|365980910|gb|EHN16927.1| S54 family peptidase [Clostridium sporogenes PA 3679]
Length = 343
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + +RLIT +LHGG+ H+ NM +L IG +E FG ++ ++Y ISG
Sbjct: 193 VNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIYFGKVKYLIIYFISGILS 252
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL-TLVVIIAINLAVGI- 240
S S LF S +S+GASGA+FG LG+ L N K FL ++ +I INL +G
Sbjct: 253 SYFSYLFSSS-VSIGASGAIFGTLGATLIIAYKNRK-KGGKEFLNNIISVIVINLILGFS 310
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+P+VDNF HIGG I G ++ + + R +
Sbjct: 311 IPNVDNFGHIGGLIGGVIVTLLLMNRTK 338
>gi|374995763|ref|YP_004971262.1| hypothetical protein Desor_3244 [Desulfosporosinus orientis DSM
765]
gi|357214129|gb|AET68747.1| putative membrane protein [Desulfosporosinus orientis DSM 765]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V+ ++ + WR T ++H G H+ N+ +L V+G E+ FG R ++Y++SG G
Sbjct: 168 KVNSLILAGEVWRFFTSMFIHIGYLHLGFNLYALWVLGPFTEKLFGHWRFLVIYLLSGLG 227
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
GS +++ F S +S GASGA+FGLLG++L + ++ + + LV+++ IN G+
Sbjct: 228 GS-IASFFFTSGLSAGASGAIFGLLGALLYYSLKRPWLWKSGLGMNLVLVLVINFGFGLT 286
Query: 242 -PHVDNFAH 249
P +DNFAH
Sbjct: 287 QPGIDNFAH 295
>gi|417886300|ref|ZP_12530447.1| peptidase, S54 family [Lactobacillus oris F0423]
gi|341593798|gb|EGS36623.1| peptidase, S54 family [Lactobacillus oris F0423]
Length = 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L + GAL S + + WRLIT ++H G H+L N ++L IG+ +EQ FG R+ +
Sbjct: 33 VLLQFGALQ-SAALQAGEWWRLITPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWRLLV 91
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML---SELITNWTI-YTNKHFLTLV 229
+Y+ S G+L+SA ++ + IS GAS +FGL G+ + + N + ++ FL LV
Sbjct: 92 IYLGSAVVGNLMSAYWLPAGISAGASTGIFGLFGAFIMLGASFRENQALRMLSRQFLILV 151
Query: 230 VI-IAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
V+ I +L V P +D H+GGFI GFLL ++
Sbjct: 152 VLNIVTDLMV---PGIDLAGHLGGFIGGFLLAYL 182
>gi|207738893|ref|YP_002257286.1| membrane protein [Ralstonia solanacearum IPO1609]
gi|206592264|emb|CAQ59170.1| membrane protein [Ralstonia solanacearum IPO1609]
Length = 543
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL P SV G + + V + WRL++ +LH GV H+ NM+ L GI +E+
Sbjct: 202 NPLQTPISVLFSLGG--NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 259
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTIYT-- 221
+G L+Y+ +G GS LS F Q I VGASGA+FG+ G+ L + +
Sbjct: 260 IYGPAAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMPQT 319
Query: 222 -NKHFLT-LVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
+K LT L + + +LA G+ P VDN AHIGG + G +L + R
Sbjct: 320 LSKRLLTQLGLFVLYSLAQGLTKPGVDNAAHIGGLVGGCMLAMILPAR 367
>gi|219849715|ref|YP_002464148.1| rhomboid family protein [Chloroflexus aggregans DSM 9485]
gi|219543974|gb|ACL25712.1| Rhomboid family protein [Chloroflexus aggregans DSM 9485]
Length = 271
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ L +GA V++ + + WRL+T LH + HI N +L V+G E+ +G +
Sbjct: 71 PTLSVLVVLGA-KVNERIAAGEVWRLLTATVLHANLIHIFFNGYALSVLGPETERFYGHV 129
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI---YTNKHFL 226
R +LY++SG GGS+ S + S +VGASGA+FGL+G + N + +
Sbjct: 130 RFLVLYLLSGVGGSIASYA-LSSAPAVGASGAIFGLIGGLGMFYYLNRQVLGQFGQDQVR 188
Query: 227 TLVVIIAINLAVGILPH--VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
+V I INL +G +DN+ H+GG +SG ++ + P+ ++ R+ + L
Sbjct: 189 GIVAIAVINLLIGFAAQGVIDNWGHLGGLVSGVVVSLA--LSPRLT-IDSRF----FPPL 241
Query: 285 SRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLR 317
R+F Q LW+ + TLG+++L+R
Sbjct: 242 LIRRF-PRQGWLWVTA-------FTLGMMVLVR 266
>gi|418309099|ref|ZP_12920674.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
gi|365235250|gb|EHM76170.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
Length = 364
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 12/186 (6%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSGYSA 283
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+ L + A
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWILLIGMLVIFIA 356
Query: 284 LSRRKF 289
L R F
Sbjct: 357 LQIRIF 362
>gi|425737376|ref|ZP_18855649.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
gi|425482724|gb|EKU49880.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
Length = 484
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
+ + L +GAL VV H W RLIT +LH HIL NMLSL + G LE G
Sbjct: 182 TDLKLIDLGALAHFNVV--HGEWHRLITSMFLHLNFEHILFNMLSLFIFGKLLESILGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN---KHFL 226
R+ +Y++SG G+L++ F S+GASGA+FGL+GS+++ +I + + L
Sbjct: 240 RMFGVYMLSGIIGNLVTLAFSPDTFSLGASGAIFGLIGSLIACMIISQKFDQRTIGQLLL 299
Query: 227 TLVVIIAINLAVGILPHVDNFAHIGGFISGFL---LGFVFLIRPQFGWV 272
L++++ I+L + +++ AHIGG + G L LG+ FL + W+
Sbjct: 300 ALLIMVVISL---FISNINVLAHIGGLLGGVLVTFLGYYFLKDRKLFWI 345
>gi|239637639|ref|ZP_04678611.1| rhomboid family protein [Staphylococcus warneri L37603]
gi|239596857|gb|EEQ79382.1| rhomboid family protein [Staphylococcus warneri L37603]
Length = 484
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 18/172 (10%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RL+T +LH HIL NMLSL + G +E G
Sbjct: 182 SDIKLLDVGGLVHFNVV--HGEWYRLVTSMFLHYNFEHILMNMLSLYIFGKIVESVLGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ +G G+ +S F + ISVGASGA+FGL+GS+ + +Y +K F V
Sbjct: 240 KMLAIYLFAGIFGNFVSLSFNTTTISVGASGAIFGLIGSIFA------ILYLSKTFDKKV 293
Query: 230 V---IIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
+ +IA+ + +G+ + +++ AH+GGF+ G L+G+ F + W+
Sbjct: 294 IGQLLIALVILIGLSLFMSNINVMAHLGGFVGGLLITLIGYYFNVNRNIFWI 345
>gi|168181264|ref|ZP_02615928.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|237793720|ref|YP_002861272.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
gi|182675329|gb|EDT87290.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|229262482|gb|ACQ53515.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
Length = 342
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 14/132 (10%)
Query: 123 VSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
V+ ++ + +RLIT +LHGG+ H+ NM +L IG +E FG ++ ++Y ISG
Sbjct: 193 VNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIYFGKVKYLIIYFISGILS 252
Query: 183 SLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN-----KHFL-TLVVIIAINL 236
S S LF +++S+GASGA+FG+LG+ L YTN K FL ++ +I +NL
Sbjct: 253 SYFSYLF-SASVSIGASGAIFGILGATL------IIAYTNRKKGGKEFLNNIISVIVVNL 305
Query: 237 AVGI-LPHVDNF 247
+G +P+VDNF
Sbjct: 306 ILGFSIPNVDNF 317
>gi|333371980|ref|ZP_08463918.1| rhomboid protease GluP [Desmospora sp. 8437]
gi|332975161|gb|EGK12063.1| rhomboid protease GluP [Desmospora sp. 8437]
Length = 215
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 113 VTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVG 172
+ L + GAL+ + ++ + WRL+T +LH G+ H L N SL ++G +LE FG R
Sbjct: 59 LVLLRFGALENTALLIDGEWWRLVTPVFLHIGITHFLFNSFSLYLLGPQLEWLFGRWRFI 118
Query: 173 LLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
LY+++G G+L + + IS GASGA++GLLG + + L+ ++
Sbjct: 119 ALYLLTGIMGNLATVYLGEVGISAGASGAIYGLLGVYVYLFLFRRGSMDPDTGKGLLALV 178
Query: 233 AINLAVGIL-PHVDNFAHIGGFISGFLL 259
INL + IL P ++ AH+GG ++GFLL
Sbjct: 179 GINLVISILTPTINLTAHLGGLVAGFLL 206
>gi|436838188|ref|YP_007323404.1| Rhomboid protease gluP [Fibrella aestuarina BUZ 2]
gi|384069601|emb|CCH02811.1| Rhomboid protease gluP [Fibrella aestuarina BUZ 2]
Length = 251
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
++ P+ L GA + + + Q WRL+T +LH G+ HI+ NM+SL V+G ++E
Sbjct: 51 IMSPTGQDLVNWGA-NYTPLTYGGQPWRLLTACFLHIGLIHIVVNMMSLRVLGSQIEPLL 109
Query: 167 GFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN-WTIYTNKHF 225
G R + Y+++G GSL+S + +S GASGA+FG+ G ++ L+TN + K
Sbjct: 110 GTSRFAVGYVVTGLTGSLVSLWWHDMVVSAGASGAIFGIEGMLVGLLLTNLFDAAARKAL 169
Query: 226 L-TLVVIIAINLAVGILPHVDNFAH--IGGFISGFLLGFVFLIRPQFGWVEQR 275
L + ++ INL +G DN AH L + ++IR + GW R
Sbjct: 170 LKNSLSVVGINLLIGAGIGADNAAHLGGFLGGLLVGLSYYYVIRAELGWPAPR 222
>gi|118349640|ref|XP_001008101.1| Rhomboid family protein [Tetrahymena thermophila]
gi|89289868|gb|EAR87856.1| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 295
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Query: 107 LLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEF 166
LL + +L MGA+ + +K Q +R++ ++H H+L N +SL +I +E +
Sbjct: 96 LLEINQKSLIDMGAVVPIDIREKGQYYRVLFAMFMHASFVHLLFNQISLFIILSAIEYSY 155
Query: 167 GFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWT---IYTN 222
G + ++Y++SG G ++L+A F I +I VG SGA+ GLL +LS I NW +
Sbjct: 156 GLLNTTIIYLLSGIGANMLAANFGIDYDIYVGCSGAVTGLLACVLSYFILNWNKLEVLGP 215
Query: 223 KHFLTLVVIIAINLAVGILP---HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
L + I L + P + +++IGGF++G G Q G E+ +S
Sbjct: 216 MREYILCIFIMFMLLAFLFPGPSSISTYSNIGGFLAGLFSGLAIPEPAQQGSYEKYAKIS 275
Query: 280 GYSALS 285
G+ LS
Sbjct: 276 GWVLLS 281
>gi|149181994|ref|ZP_01860480.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
gi|148850259|gb|EDL64423.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
Length = 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR T +H G H+L N +L +G +E+ FG R +Y+ +GF G+L S +F S
Sbjct: 202 WRFFTPIVIHIGFLHMLMNTFALYFLGPAVERIFGSARFLFIYLFAGFSGTLASFVFNDS 261
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
+S GASGA+FG G++L + I+ ++V+I INLA G +P +DN HIG
Sbjct: 262 -LSAGASGAIFGCFGALLYFGTAHPKIFFRTMGTNILVVIGINLAFGFTIPGIDNAGHIG 320
Query: 252 GFISGFL 258
G G L
Sbjct: 321 GLAGGAL 327
>gi|154420777|ref|XP_001583403.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917644|gb|EAY22417.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 473
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 94 LGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANML 153
F +EN GPS+ L ++GAL + D + WRL+ L GV ILA +
Sbjct: 215 FANFKSYNIQENLYYGPSAKLLMRVGALYPPWIYD-GEWWRLLVAISLQPGV-AILAIDI 272
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
+ + +E+ GF L++++ G G++LS+ I ++ GA+GA+ G LG L+ L
Sbjct: 273 VYMGLLYEIERYNGFWSALLIFLLCGLYGNVLSSYIISESVICGATGAICGWLGFSLTRL 332
Query: 214 ITNWTIYTNKHFLTLVVIIAINL-AVGILPHVDNFAHIGGFI 254
I ++ I +L + + I + AVGILP+VDNF H+GGF+
Sbjct: 333 IASFHIKKRVCYLITEIFMIIFIGAVGILPYVDNFQHVGGFV 374
>gi|372325402|ref|ZP_09519991.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
gi|366984210|gb|EHN59609.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
Length = 234
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GPS +L +G V + + +R T +LH + HI +NML+L+++G +E+ FG
Sbjct: 41 GPSIQSLVLLGG-GVDSLFMSGEWYRAFTPIFLHASLMHIFSNMLTLVIVGPFVEKLFGK 99
Query: 169 IRVGLLYIISGFGGSLLSALFIQSN--ISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
+ L+Y+I+G G+LL+ +F + +SVGASGALFGL G M+ N + + L
Sbjct: 100 GKFLLIYLITGVWGNLLTFIFDPNPNVVSVGASGALFGLFGVMIVSGWYNRNNFVFRRQL 159
Query: 227 TLVVIIAINLAVGIL--PHVDNFAHIGGFISGFLLGFVF 263
+ +A+ +G L P VD +AHIGG ISG LL +F
Sbjct: 160 IIFAALAVFNLIGNLNDPSVDIWAHIGGLISGSLLAIIF 198
>gi|405977660|gb|EKC42099.1| Rhomboid family member 2 [Crassostrea gigas]
Length = 401
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 134 RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN 193
R+++ N LH G+FH+ ++ L I ++EQ G+IR+ ++YI SG G+L SA+
Sbjct: 182 RILSANLLHAGIFHLAVTLIMQLWIMRKIEQMIGWIRMMIIYISSGCVGTLASAVLTPYQ 241
Query: 194 ISVGASGALFGLLGSM----LSELITNWTIYTNK---------HFLTLVVIIAINLAVGI 240
+ VG SGA FGLL M L+E+I N NK +F VI+ + +G+
Sbjct: 242 VEVGPSGAQFGLLACMYVDILNEIIVNKYSNENKSEENRRLWYNFAAFSVILFLLFFLGV 301
Query: 241 LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVS 300
P +DN++HI GFI G + V + E G + + +V+
Sbjct: 302 FPWMDNWSHIFGFIFGIFISLVVM-------KETDVKAKGITRVHV-----------VVT 343
Query: 301 LVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
++ + L + L+++ V N+ +W Y++C+P + C+
Sbjct: 344 FGILSLALFIFLIIMFYAVPLNES-TWLQYINCIPFTETFCK 384
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 106 PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQE 165
P+ + L ++GA +V + +R+IT ++HGG+ H+L N +L G +E
Sbjct: 28 PVFRNQAYLLIRLGA-QYGPLVSGGEWYRVITAMFVHGGLLHLLFNSYALFYFGTIVESI 86
Query: 166 FGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF 225
+G + + Y+++G G+L + +F +ISVGASGA+FGL+G + + T + F
Sbjct: 87 YGTEKFVIFYLLAGAVGNLATHVFYYRSISVGASGAIFGLVGILFALGFRRDTPIFMRQF 146
Query: 226 --LTLVVIIAINLAVGILP--HVDNFAHIGGFISGFLLGFVFLIRPQFG 270
+ L+ +I N+ G +P +++N AH+GGF++G +G+ RP +
Sbjct: 147 TGMALLPMIIFNVVYGFMPGSNINNAAHLGGFLAGMAIGYFADPRPVYA 195
>gi|390604748|gb|EIN14139.1| rhomboid-domain-containing protein, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 350
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 132/320 (41%), Gaps = 88/320 (27%)
Query: 97 FSFQPFKENPLLGPSSVTLQKMGAL-------------------------DVSKVVD--- 128
FSF+P NP+LGPSS L +GA V++V D
Sbjct: 51 FSFKPV-VNPMLGPSSSGLIHLGARFPACMKDVSAIPVDTQLACPNNTANPVTRVCDLEE 109
Query: 129 -----------KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
+Q +R IT +LH G+ HIL NM++ L + ++E+E G L Y
Sbjct: 110 VCGFGGFHSQTPNQWFRFITPIFLHAGIVHILLNMVAQLTVSAQIEREMGSGGFLLTYFA 169
Query: 178 SGFGGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNK------------- 223
+G G++L F + S GASGA+FG + +L+ +W +
Sbjct: 170 AGIFGNVLGGNFALVGLPSTGASGAIFGTVAVTWVDLLAHWRYHYRPGRKASLDGLMRLS 229
Query: 224 ------HFLTLVVIIAINLAVGILPHVDN----FAHIGGFISGFLLGFVFLIRPQFGWVE 273
++V + + +A+G +P AH+GGF+ G L+G F
Sbjct: 230 FADSPVQLAWMIVELLLGVAMGYIPCKLTLNLPLAHLGGFLMGLLVGMFF---------- 279
Query: 274 QRYALSGYSALSRRKFMTYQCILW---IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHY 330
Y +S K ++ ++W +V+L L+IV L + L+ D N C C Y
Sbjct: 280 -------YPVISVTK--QHKGVVWGFRLVALPLIIV-LFVVLIRNFYTTDPNAACPGCRY 329
Query: 331 LSCVPTSRWSCRTEPAFCST 350
LSC+P R P C T
Sbjct: 330 LSCLPLKLNQVRCLPR-CQT 348
>gi|311742190|ref|ZP_07716000.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
gi|311314683|gb|EFQ84590.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
Length = 283
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 38 QGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRF 97
Q V P G ++ + VT I + N+ +F +T V ++++ R +G
Sbjct: 52 QAVRQPRTLAGGRVQAREGVVTMAI---IAVNVVVFALTDIVGT---DAITAAGRMVGA- 104
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
L P +D WRL+T +LH GV H+L NM +L +
Sbjct: 105 --DVIDTQGRLWPG---------------MDDGGYWRLLTSAFLHAGVLHLLFNMYALYL 147
Query: 158 IGIRLEQEFGFIRVGLLYI-ISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITN 216
G +E+ G R Y+ ++ F G+++ L +VGASGA+FGL G L L+
Sbjct: 148 FGPFVERALGSARYVAAYLTMAVFSGAVVYLLTDPRTFTVGASGAVFGLFGYALVLLVR- 206
Query: 217 WTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+ TL+V++A+N + + P++ H+GGFI+G LG P+
Sbjct: 207 ----AKQDVRTLLVLLAVNGVISLAPNISWQGHLGGFIAGLTLGAAVAYAPR 254
>gi|256072025|ref|XP_002572338.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 471
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R+ T +LH GV H++ + ++ LE+ G+ R+ L+YI+SG GSL S +F
Sbjct: 343 NQMYRIFTSLFLHAGVLHLILTLGVQMIFMRDLEKMIGWHRITLVYILSGCIGSLTSGIF 402
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL--VVIIAINLAVGILPHVDNF 247
+ + G +GA F LLG L +LI W + + L ++++ I G+LP +DN+
Sbjct: 403 LPYQVETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFGLLPWIDNY 462
Query: 248 AHIGGFISG 256
A+ G F+S
Sbjct: 463 ANAGSFLSA 471
>gi|225386984|ref|ZP_03756748.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
gi|225046996|gb|EEG57242.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA+ VVD Q +RL+T ++H GV H+L NML L V+G LE+ G ++ + Y++
Sbjct: 32 GAMFAPLVVDHGQYYRLVTSVFMHFGVSHLLNNMLVLFVLGDNLERALGHVKYLIFYLLC 91
Query: 179 GFGGSLLSAL--FIQSNISV--GASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G G +L+S + ++SV GASGA+FG++G ++ + N + L V+I +
Sbjct: 92 GVGANLVSMTVNLMTGSLSVGAGASGAIFGVVGGLVYAVGVNRGRLEDLTSRQLGVMILL 151
Query: 235 NLAVGILP-HVDNFAHIGGFISGFLLGFVFLIRPQ 268
L G ++DN AHIGG +G LLG + +P+
Sbjct: 152 TLYHGFTSMNIDNAAHIGGLAAGILLGILLYRKPR 186
>gi|153955340|ref|YP_001396105.1| hypothetical protein CKL_2722 [Clostridium kluyveri DSM 555]
gi|219855759|ref|YP_002472881.1| hypothetical protein CKR_2416 [Clostridium kluyveri NBRC 12016]
gi|146348198|gb|EDK34734.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219569483|dbj|BAH07467.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 338
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA V+ ++ K Q +RL TC +LH G+ H+ NM SL ++G +E+ +G ++ ++YII
Sbjct: 186 MGA-KVNFLIAKGQYYRLFTCMFLHAGIVHLGVNMYSLYMMGTFIEKVYGKLKYIIIYII 244
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLA 237
SG S+ S +F S+ISVGASGA+FGLLG+ L + + + +V II +NL
Sbjct: 245 SGLFSSIFSYMF-SSSISVGASGAIFGLLGASLVFALKMKHSVAREFIMNIVAIIVMNLI 303
Query: 238 VGI-LPHVDNF 247
+G + +VDNF
Sbjct: 304 IGFSIANVDNF 314
>gi|417918105|ref|ZP_12561658.1| peptidase, S54 family [Streptococcus parasanguinis SK236]
gi|342829096|gb|EGU63457.1| peptidase, S54 family [Streptococcus parasanguinis SK236]
Length = 225
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
D Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++ A
Sbjct: 54 DPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFVA 113
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 114 IFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLILVNLIFSFMPRISMA 173
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
HIGG ++G +L +VF +R + ++ + Y +
Sbjct: 174 GHIGGLVAGVMLAYVFPVRGEARFMNRTYQM 204
>gi|312866894|ref|ZP_07727107.1| peptidase, S54 family [Streptococcus parasanguinis F0405]
gi|311097677|gb|EFQ55908.1| peptidase, S54 family [Streptococcus parasanguinis F0405]
Length = 225
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
D Q WR++T ++H G+ H + NM++L +G E FG LY++SG G++ A
Sbjct: 54 DPSQLWRIVTATFVHIGLEHFVLNMITLYYLGRLAEDLFGSKAFLALYLLSGMMGNVFVA 113
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+F I+ GAS ALFGL G++ + + Y + +I +NL +P +
Sbjct: 114 IFTPDVIAAGASTALFGLFGTIGALRFIVQSPYIRHLSQSYTSLILVNLIFSFMPRISMA 173
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYAL 278
HIGG ++G +L +VF +R + ++ + Y +
Sbjct: 174 GHIGGLVAGVMLAYVFPVRGEARFMNRTYQM 204
>gi|455791418|gb|EMF43234.1| peptidase, S54 family [Leptospira interrogans serovar Lora str. TE
1992]
Length = 156
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+T ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 15 QWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSGLCGSLASIVWY 74
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 75 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 134
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 135 HIGGLVSGTLSGIILF---QFG 153
>gi|417643203|ref|ZP_12293263.1| peptidase, S54 family [Staphylococcus warneri VCU121]
gi|330685982|gb|EGG97605.1| peptidase, S54 family [Staphylococcus epidermidis VCU121]
Length = 405
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 18/189 (9%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RL+T +LH HIL NMLSL + G +E G
Sbjct: 182 SDIKLLDVGGLVHFNVV--HGEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
++ +Y+ +G G+ +S F + ISVGASGA+FGL+GS+ + L Y +K F V
Sbjct: 240 KMLAIYLFAGIFGNFVSLSFNTTTISVGASGAIFGLIGSIFAIL------YLSKTFDKRV 293
Query: 230 V---IIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSG 280
+ +IA+ + +G+ + +++ AH+GGFI G L+G+ F + W+ L
Sbjct: 294 IGQLLIALVILIGLSLFMSNINVMAHLGGFIGGLLITLIGYYFNVNRNIFWILLIVLLVL 353
Query: 281 YSALSRRKF 289
+ A+ R F
Sbjct: 354 FVAMQIRIF 362
>gi|145503155|ref|XP_001437555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404705|emb|CAK70158.1| unnamed protein product [Paramecium tetraurelia]
Length = 277
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+ ++ + Q WRL+ +LHG HI+ NM+ + G LE G+ RV +LYI+
Sbjct: 82 GSKHTPSIIYRFQFWRLVCPIFLHGSFSHIIGNMMVQIYYGFILELTHGWKRVSILYIVG 141
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH---FLTLVVIIAIN 235
G G SL S + S SVGASG++F LL L IT + K F+ L +I ++
Sbjct: 142 GIGASLFSCVRFYSETSVGASGSIFALLALELIYFITAFPGIEPKRIVVFILLAPMIFLS 201
Query: 236 LAVGILPHVDNFAHIGGFISGFLLG 260
+ P VD H+GG + G L+G
Sbjct: 202 F-IDAPPQVDIAGHLGGLVVGLLIG 225
>gi|395242536|ref|ZP_10419533.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480268|emb|CCI85773.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 240
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
+F ENP TL K+GA++ V HQ WRL T +LH G+ H+++N + +
Sbjct: 30 TFMGGSENP------ATLMKLGAMNNYAVAAGHQWWRLFTAQFLHIGIMHLVSNAVMIFY 83
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSML------ 210
+G E G R ++Y++SG GG+L+S F N +S GAS ALFGLLG+++
Sbjct: 84 LGNYFESIIGHWRFWVIYLLSGVGGNLMSFAFGSDNSLSAGASTALFGLLGAVIAISRRR 143
Query: 211 ------SELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
S L + + ++ +AI++ +P+VD HIGG + GF+
Sbjct: 144 ASASPNSSLSAMLNYFGRQAAALAIINLAIDI---FMPNVDIQGHIGGLLMGFM 194
>gi|383761642|ref|YP_005440624.1| rhomboid family protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381910|dbj|BAL98726.1| rhomboid family protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 260
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L MGA V++ + + WRL+T +LH GV H+L N+ +L ++G LE G +R
Sbjct: 52 VLVLMGA-KVNERLAAGELWRLVTPIFLHSGVMHLLFNLYALYILGPMLEGYIGHVRFLA 110
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI---TNWTIYTNKHFLTLVV 230
+++ISG G+L S + +SVGASGA+FGLLG++ + N+ +++
Sbjct: 111 VFLISGLYGTLFSYA-LSGPVSVGASGAIFGLLGAIALFFLRYRDNFGPQGRAILQNMLI 169
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISG 256
I+A+NL +G ++DN+ HIGG I G
Sbjct: 170 ILALNLVIGFSSSYIDNWGHIGGLIGG 196
>gi|88195357|ref|YP_500161.1| rhomboid family protein, partial [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202915|gb|ABD30725.1| rhomboid family protein [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 336
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGFLLGFV 262
++IA+ + VG+ + +++ AHIGGFI G L+ +
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLI 332
>gi|417897083|ref|ZP_12541026.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
gi|341840349|gb|EGS81869.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
Length = 372
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W R++T +LH HIL NMLSL + G +E G
Sbjct: 182 SDVKLLDVGGLVHFNVV--HGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y I+G G+ +S F + ISVGASGA+FGL+GS+ + + + T NK L
Sbjct: 240 RMLTVYFIAGLFGNFVSLSFNTTTISVGASGAIFGLIGSIFAMMYVSKTF--NKKMLG-Q 296
Query: 230 VIIAINLAVGI---LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWV 272
++IA+ + VG+ + +++ AHIGGFI G L+G+ + + W+
Sbjct: 297 LLIALVILVGVSLFMSNINIVAHIGGFIGGLLITLIGYYYKVNRNIFWI 345
>gi|163846340|ref|YP_001634384.1| rhomboid family protein [Chloroflexus aurantiacus J-10-fl]
gi|222524105|ref|YP_002568576.1| rhomboid family protein [Chloroflexus sp. Y-400-fl]
gi|163667629|gb|ABY33995.1| Rhomboid family protein [Chloroflexus aurantiacus J-10-fl]
gi|222447984|gb|ACM52250.1| Rhomboid family protein [Chloroflexus sp. Y-400-fl]
Length = 271
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ L +GA ++ D WRL+T +LH + HI N +L V+G E+ +G
Sbjct: 71 PAFPVLAVLGAKINERIADGEL-WRLLTAVFLHANLIHIFFNGYALSVLGPETERFYGHG 129
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI---YTNKHFL 226
R LY+ISG GGS+ S + +VGASGA+FGL+G + N + +
Sbjct: 130 RFLALYLISGLGGSIASYA-LSPAPAVGASGAIFGLIGGLGVFYYLNRRVLGEFGQNQVR 188
Query: 227 TLVVIIAINLAVGILPH--VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
+V I INL +G +DN+ H+GG +SG ++G R V+ R+ + L
Sbjct: 189 GIVAIALINLLIGFAAQGVIDNWGHLGGLLSGIVIGVALAPRLT---VDLRF----FPPL 241
Query: 285 SRRKFMTYQCILWIVSLVLVIVGLT 309
R+F Q LW+ ++ LV++ L
Sbjct: 242 FIRRF-PMQGWLWVFAIALVMIVLV 265
>gi|451820893|ref|YP_007457094.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786872|gb|AGF57840.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 512
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR IT +LH + H+ N +L +IG E+ FG + +Y I+G G++ S F
Sbjct: 229 QYWRFITPMFLHANIMHVALNCYTLYLIGKLSERIFGKAKFITIYFIAGILGNIFSFAF- 287
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAH 249
SN VGASGA+FGL G++L + I ++ + ++ I INL G +DNFAH
Sbjct: 288 NSNPGVGASGAIFGLFGAVLFKCIEKPALFKSGLGPNILGAILINLFYGFSKSGIDNFAH 347
Query: 250 IGGFISGFLLGFVF 263
+GG I GF + +F
Sbjct: 348 LGGLIGGFTVAGIF 361
>gi|403385795|ref|ZP_10927852.1| hypothetical protein KJC30_13905 [Kurthia sp. JC30]
Length = 206
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
+ WRL+T ++HGG HIL+NM L V G LE+ G R ++++SG G++ + F+
Sbjct: 56 EYWRLVTAIFIHGGFLHILSNMFWLYVFGPELEKIAGRARFIFIFLMSGIIGNV-ATYFV 114
Query: 191 QS--NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFA 248
Q +SVGASGA+FG+LG+ L+ + I+ + L ++I + + P+V+ A
Sbjct: 115 QDLGYVSVGASGAVFGMLGAYLALVYYTRHIFPQLRQMILPLVIISVIITFLQPNVNATA 174
Query: 249 HIGGFISGFLLGFV-FLIRPQFGWVEQR 275
HI G I+G ++GF+ F + W +QR
Sbjct: 175 HIAGLITGAVIGFINFHPKNIAKWRKQR 202
>gi|164662841|ref|XP_001732542.1| hypothetical protein MGL_0317 [Malassezia globosa CBS 7966]
gi|159106445|gb|EDP45328.1| hypothetical protein MGL_0317 [Malassezia globosa CBS 7966]
Length = 326
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 35/266 (13%)
Query: 83 PKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLH 142
P N + C+ S Q F ++ + +L + LD K D QG+R ++ ++H
Sbjct: 28 PTNMIPCLKE--STSSQQKFMKDQM-----CSLAHICGLDDPKNPD--QGYRFVSAIFVH 78
Query: 143 GGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQ-SNISVGASGA 201
G+ HIL N++ LL + ++E+ G I ++++ G GG+LL F ++GASGA
Sbjct: 79 AGIVHILFNLIVLLTLCCQIEKLIGTIAYAIVFMAGGIGGNLLGGNFGLIGQPALGASGA 138
Query: 202 LFGLLGSMLSELITNWTIYTN-KHFLTLVVIIAI-NLAVGILPHVDNFAHIGGFISGFLL 259
++ + + +LI NW K LT+ +I A+ LA+G+LP +DNF+HIGGF G L
Sbjct: 139 VYTCISFEMIDLIYNWKYEIKPKTRLTVSIIFAVLGLALGLLPGLDNFSHIGGFCVGILG 198
Query: 260 GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLV---LVIVGLTLGLVMLL 316
G VF A S T+ I W+ L+ L+I + ++
Sbjct: 199 GMVF-------------------APSIHSTKTHMFINWLCRLIGMGLLIAFIVALVLNFY 239
Query: 317 RGVDANDHCSWCHYLSCVPTSRWSCR 342
R D C WC YLSC+P +CR
Sbjct: 240 RNDDPATACKWCRYLSCLPMFD-ACR 264
>gi|405950080|gb|EKC18086.1| Rhomboid family member 2 [Crassostrea gigas]
Length = 703
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 36/229 (15%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q R+++ N LH G+FH+ ++ L I ++EQ G+IR+ ++YI SG G+L SA+
Sbjct: 480 DQFLRILSANLLHAGIFHLAVTLIMQLWIMRKIEQMIGWIRMMIIYISSGCVGTLASAIL 539
Query: 190 IQSNISVGASGALFGLLGSM----LSELITNWTIYTNK-----------HFLTLVVIIAI 234
+ VG SGA FGLL M L+E+I N Y++K +F +I+ +
Sbjct: 540 TPYQVEVGPSGAQFGLLACMYVDILNEIIVN--KYSDKDKSEENRRLWFNFAAYSIILFL 597
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQC 294
+G+ P +DN++HI GFI G + V + E G +
Sbjct: 598 LFFLGVFPWMDNWSHIFGFIFGIFISLVVM-------KETDVKAKGITR----------- 639
Query: 295 ILWIVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
+ +V+ ++ + L + L+++ V N+ +W Y++C+P + C+
Sbjct: 640 VHVVVTFGILSLALFIFLIIMFYAVPLNES-TWLQYINCIPFTETFCKN 687
>gi|421896459|ref|ZP_16326856.1| membrane protein [Ralstonia solanacearum MolK2]
gi|206587624|emb|CAQ18206.1| membrane protein [Ralstonia solanacearum MolK2]
Length = 458
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL P S+ G + + V + WRL++ +LH GV H+ NM+ L GI +E+
Sbjct: 117 NPLQTPISILFNLGG--NAAFEVQHGEWWRLLSATFLHAGVLHLAINMVGLYATGITVER 174
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTIYT-- 221
+G L+Y+ +G GS LS F Q I VGASGA+FG+ G+ L + +
Sbjct: 175 IYGPAAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMPQT 234
Query: 222 -NKHFLT-LVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
+K LT L + + +LA G+ P VDN AHIGG + G +L + R
Sbjct: 235 LSKRLLTQLGLFVLYSLAQGLTKPGVDNAAHIGGLVGGCVLAMILPAR 282
>gi|350645981|emb|CCD59258.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +R+ T +LH GV H++ + ++ LE+ G+ R+ L+YI+SG GSL S +F
Sbjct: 221 NQMYRIFTSLFLHAGVLHLILTLGVQMIFMRDLEKMIGWHRITLVYILSGCIGSLTSGIF 280
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL--VVIIAINLAVGILPHVDNF 247
+ + G +GA F LLG L +LI W + + L ++++ I G+LP +DN+
Sbjct: 281 LPYQVETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFGLLPWIDNY 340
Query: 248 AHIGGFISG 256
A+ G F+S
Sbjct: 341 ANAGSFLSA 349
>gi|156406677|ref|XP_001641171.1| predicted protein [Nematostella vectensis]
gi|156228309|gb|EDO49108.1| predicted protein [Nematostella vectensis]
Length = 456
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 25/209 (11%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
HQ WR +T ++ GV + + L LE++ G++R+ L+++ +G GG L+ +LF
Sbjct: 263 HQWWRFLTTVYIPQGVVDGVIILSLELPFSWTLERKLGWLRLLLVHMSAGAGGHLMGSLF 322
Query: 190 IQ-SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI-NLA-VGILPHVDN 246
+ ++I G +L G+L L + W + T +++ LA +G +PH+ N
Sbjct: 323 SKFTSILTGGGPSLAGILAVHLVHHLEIWGLRPKLSKYTFCWTLSVLTLAFLGTIPHLSN 382
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
A++ GF+ GFLL +++ F WV++ C+L I+ LV++I
Sbjct: 383 HANVWGFVVGFLLAMIYI---PFQWVKR------------------ICLLRIICLVILIF 421
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVP 335
G L M V ++ CS C Y+ CVP
Sbjct: 422 GFMCSL-MFFYEVQPSEPCSLCMYIDCVP 449
>gi|433629203|ref|YP_007262831.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
gi|432160796|emb|CCK58126.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
Length = 249
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V Q +RL+T +LH G H+L NM +L V+G LE G +R G LY +S GGS+L
Sbjct: 71 VASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLV 130
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
L N + GASGA+FGL G + + ++ + + +V +I INLA L P +
Sbjct: 131 YLIAPLNTATAGASGAVFGLFG---ATFMVARRLHLDVRW--VVALIVINLAFTFLAPAI 185
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
H+GG ++G L+G ++ P+
Sbjct: 186 SWQGHVGGLVTGALVGATYVYAPR 209
>gi|294827768|ref|NP_711133.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|386073248|ref|YP_005987565.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
gi|293385613|gb|AAN48151.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|353457037|gb|AER01582.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
Length = 226
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRL+ ++H G H+ N L++ I +E G IR +LYI SG GSL S ++
Sbjct: 85 QWWRLLINVFVHAGFPHLFFNGFGLIISAIFVELILGRIRFLILYIFSGLCGSLASIVWY 144
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNFA 248
+ ISVGASGA+FGL G++L ++ + +K + +V I L G+ +DN A
Sbjct: 145 PNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFILTGLLWGLFGGIDNAA 204
Query: 249 HIGGFISGFLLGFVFLIRPQFG 270
HIGG +SG L G + QFG
Sbjct: 205 HIGGLVSGTLSGIILF---QFG 223
>gi|294953649|ref|XP_002787869.1| rhomboid protease, putative [Perkinsus marinus ATCC 50983]
gi|239902893|gb|EER19665.1| rhomboid protease, putative [Perkinsus marinus ATCC 50983]
Length = 403
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
P++ TL MGA + K WRL+ LH + H+ N+ L +G +E++FGF
Sbjct: 191 APATCTLYLMGA-SWGPSIAKGGIWRLLAPMGLHANMLHLFFNIFFQLRMGFGMERQFGF 249
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL 228
+ LY++ G G+L+S ++VGAS A FGL+G L+E+ +W + T+
Sbjct: 250 KKFMGLYMLCGLVGNLISVAVDPFKLAVGASTAGFGLVGVWLAEIFLSWHVLGPHRDRTM 309
Query: 229 VVIIAINLAVGIL----PHVDNFAHIGGFISGFL 258
V + + + ++ P++D F H GG ++GFL
Sbjct: 310 VWVAFVTVGCIVMSTMQPNIDMFGHFGGALAGFL 343
>gi|15839491|ref|NP_334528.1| rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|148821302|ref|YP_001286056.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|253797028|ref|YP_003030029.1| hypothetical protein TBMG_00111 [Mycobacterium tuberculosis KZN
1435]
gi|254233504|ref|ZP_04926830.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|289445640|ref|ZP_06435384.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289747877|ref|ZP_06507255.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308378549|ref|ZP_07482957.2| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308394636|ref|ZP_07491694.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|375294312|ref|YP_005098579.1| hypothetical protein TBSG_00111 [Mycobacterium tuberculosis KZN
4207]
gi|392430521|ref|YP_006471565.1| hypothetical protein TBXG_000111 [Mycobacterium tuberculosis KZN
605]
gi|422815296|ref|ZP_16863514.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|13879598|gb|AAK44342.1| Rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|124603297|gb|EAY61572.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|148719829|gb|ABR04454.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
gi|253318531|gb|ACT23134.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289418598|gb|EFD15799.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289688405|gb|EFD55893.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308197784|gb|ADO17908.1| rhomboid protease 1 [Mycobacterium tuberculosis H37Rv]
gi|308197788|gb|ADO17910.1| rhomboid protease 1 [Mycobacterium tuberculosis]
gi|308197792|gb|ADO17912.1| rhomboid protease 1 [Mycobacterium bovis BCG]
gi|308197796|gb|ADO17914.1| rhomboid protease 1 [Mycobacterium bovis]
gi|308352202|gb|EFP41053.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308367674|gb|EFP56525.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717250|gb|EGB26458.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|328456817|gb|AEB02240.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
gi|392051930|gb|AFM47488.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length = 284
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V Q +RL+T +LH G H+L NM +L V+G LE G +R G LY +S GGS+L
Sbjct: 106 VASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLV 165
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
L N + GASGA+FGL G + + ++ + + +V +I INLA L P +
Sbjct: 166 YLIAPLNTATAGASGAVFGLFG---ATFMVARRLHLDVRW--VVALIVINLAFTFLAPAI 220
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
H+GG ++G L+ ++ P+
Sbjct: 221 SWQGHVGGLVTGALVAATYVYAPR 244
>gi|315038824|ref|YP_004032392.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325957263|ref|YP_004292675.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|385818055|ref|YP_005854445.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
gi|312276957|gb|ADQ59597.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325333828|gb|ADZ07736.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|327183993|gb|AEA32440.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
Length = 226
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 107 LLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
LG S T L KMGA+ VV +Q WRL T +LH GV H+++N + + +G +E
Sbjct: 29 FLGGSENTNVLMKMGAMSNYAVVVGNQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEP 88
Query: 165 EFGFIRVGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITN----WTI 219
G R + Y+++G GG+L+S F +S GAS ALFGL G+M + + N
Sbjct: 89 IMGHARFLVTYLLAGIGGNLMSLAFSSDRGLSAGASTALFGLFGAMTAIGLRNIHNPMIS 148
Query: 220 YTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFV 262
+ + L + INL + I P +D + H+GG I GFLL +
Sbjct: 149 FLGRQAFVLAL---INLGIDIFAPGIDIWGHLGGLIVGFLLAVI 189
>gi|148544432|ref|YP_001271802.1| rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|184153796|ref|YP_001842137.1| hypothetical protein LAR_1141 [Lactobacillus reuteri JCM 1112]
gi|227363140|ref|ZP_03847275.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|325682754|ref|ZP_08162270.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
gi|148531466|gb|ABQ83465.1| Rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|183225140|dbj|BAG25657.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071858|gb|EEI10146.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|324977104|gb|EGC14055.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
Length = 219
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++VTL MGA + ++ + + WRL++ +LH G+ H++ N ++LL IG +E+ FG R
Sbjct: 34 NTVTLLNMGARS-TPLIREGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELI---TNWTIYTNKHFLT 227
+ ++Y +S G+ SA+F+ S IS GAS A+FGL G+ L + N +
Sbjct: 93 MVVIYFVSALFGNFTSAVFMPSTISAGASTAIFGLFGAFLMLGVCFRHNVIVRVLSRTFL 152
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
L VII I + L VD HIGG GF + F+
Sbjct: 153 LFVIINIVMDF-FLSGVDLIGHIGGLFGGFFIAFI 186
>gi|336430826|ref|ZP_08610764.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336016582|gb|EGN46362.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 209
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G ++ + +RL+T +LH + H++ NM+ L G +E+ G +R +L+ +S
Sbjct: 46 GEFGAFYLIRSQEYYRLVTAMFLHADISHLVNNMILLYFGGEIVEKTIGSVRYLVLFFVS 105
Query: 179 GFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
G G+LL+A+F S S+GASGA+FGL+G +L +IT ++++IA+
Sbjct: 106 GICGNLLTAIFEVSTGMYFNSIGASGAVFGLIGGLLYLVITRKGYAAQISVRRMILMIAL 165
Query: 235 NLAVGILP-HVDNFAHIGGFISGFLLGFV 262
+L G V+N AH+GG +SGFL+ F+
Sbjct: 166 SLYSGFQSVRVNNAAHLGGLLSGFLITFI 194
>gi|156741085|ref|YP_001431214.1| rhomboid family protein [Roseiflexus castenholzii DSM 13941]
gi|156232413|gb|ABU57196.1| Rhomboid family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA D + + Q +R +T +LHGG+ H+ N +L +G E+ FG R +Y+++
Sbjct: 89 GAKDNAAIFVGGQYYRFLTAMFLHGGLAHLFFNSFALYSLGFETERLFGAQRFLAIYMLA 148
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY---TNKHFLTLVVIIAIN 235
G GG + S + N SVGASGA+FGL+G++++ + + + +L+ I IN
Sbjct: 149 GLGGGVASYA-LNPNPSVGASGAIFGLIGALIAFYLVARRVLGGIARQQLGSLIFITLIN 207
Query: 236 LAVGI-LPHVDNFAHI 250
LA+G P++DN AHI
Sbjct: 208 LALGFTTPYIDNNAHI 223
>gi|23099378|ref|NP_692844.1| hypothetical protein OB1923 [Oceanobacillus iheyensis HTE831]
gi|22777607|dbj|BAC13879.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 518
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL +MGA + ++ + + WRL+T +LH G HIL NM++L +G +E+ FG R +
Sbjct: 213 TLIQMGA-KYNPLIMEGEWWRLLTSMFLHIGFVHILMNMVALFYLGTAVERIFGRTRFLV 271
Query: 174 LYIISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
+Y + G GS+ S F S +IS GASGA+FGL G++L + ++ + + +V I+
Sbjct: 272 IYFLGGIAGSIAS--FATSISISAGASGAIFGLFGALLFFGLIYKDVFKDTMGMNIVFIL 329
Query: 233 AINLAVGI-LPHVDNFAH 249
+NL +G +P +D AH
Sbjct: 330 VVNLVIGFSIPEIDMGAH 347
>gi|238922477|ref|YP_002935990.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
gi|238874149|gb|ACR73856.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
Length = 192
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
+ + Q WRL T ++H G+ HIL NM+ L +G +E+ G +++ + +++SG GS+
Sbjct: 37 EYIKDGQYWRLFTSMFMHFGLMHILNNMVVLGAVGQIVEKAMGHVKLLITFLVSGMCGSV 96
Query: 185 LSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI 240
LS + + N +S GASGA+FGL+G+++ +I N Y V ++ + + G+
Sbjct: 97 LSYIVMLYNNDYAVSAGASGAIFGLVGALVWIVIANRGFYEGVSRKQAVFMVILMIYYGV 156
Query: 241 LPH-VDNFAHIGGFISGFLLGFVFLIRPQF 269
VDN+AH GG + GF++ V + ++
Sbjct: 157 STQGVDNWAHGGGLVGGFVISIVLYRKKRY 186
>gi|414160916|ref|ZP_11417179.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876595|gb|EKS24493.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 485
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
+RLI+ ++H HIL NMLSL + G +E G ++ +Y ISG G+++S +
Sbjct: 202 YRLISSMFIHFNFEHILMNMLSLFIFGKLVEAIAGHWKMLGIYFISGIFGNIVSLALDTN 261
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIG 251
+ISVGASGA+FGL+GS+ + + + YT K L LV ++A+ + + +V+ +AH+G
Sbjct: 262 SISVGASGAIFGLIGSLFAIMYLS-KQYTPKMLLQLVGVLALLTVFSLFMANVNIYAHLG 320
Query: 252 GFISGFL---LGFVFLIRPQFGWV 272
GFI G L +G+ F + W+
Sbjct: 321 GFIGGLLATFIGYYFNKDRKLFWI 344
>gi|325663211|ref|ZP_08151661.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470665|gb|EGC73895.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 209
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 11/177 (6%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
SFQ E+ + + GA+ V ++++ + +RL T +LH G H++ NM L V
Sbjct: 25 SFQGMTEDGIF------MFHHGAMYVPSMLEEGEYYRLFTSMFLHFGFEHLMNNMFILGV 78
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSA-LFIQSN---ISVGASGALFGLLGSMLSEL 213
IG LE E G + +Y++SG G+LLSA + IQ+ IS GASGA+FG++G++
Sbjct: 79 IGWNLELEIGKWKYLAVYLLSGLMGNLLSAWMDIQTGEYAISAGASGAIFGVIGALFYVA 138
Query: 214 ITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQF 269
+ N N L ++ +L +G VDN AHIGG ISG LL + + ++
Sbjct: 139 LRNRGRIGNISSRGLAFMVLCSLYLGFTSKGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|209877288|ref|XP_002140086.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555692|gb|EEA05737.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 892
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 100 QPFKENPLLGPSSVTLQKMGALDVSKVVDKHQG-WRLITCNWLHGGVFHILANMLSLLVI 158
+PFK NP+LG L +G L V+++ ++ G RL W+H G HI N+LS +
Sbjct: 512 EPFKTNPMLGACPEALNVLGGLVVNEL--RNGGVIRLFWAMWMHAGFIHIGFNVLSQAQL 569
Query: 159 GIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT 218
G +E ++G R L+ +S GG+L ++ +++VG+SG LFG+ + L +W
Sbjct: 570 GYMMEPDWGMTRFFFLFFLSAIGGNLTVSVISPCSLTVGSSGGLFGITAAGLVYTFEHWK 629
Query: 219 IYTNKHFLTLVVI--IAINLAVGILPHVDNFAHIGGFISGFL 258
N FL + I + I + + + +AH+GGF G L
Sbjct: 630 NLPNPLFLFVFDIFSVIIGMVLSFTGVTNPWAHVGGFSVGLL 671
>gi|377556210|ref|ZP_09785925.1| Rhomboid family protein [Lactobacillus gastricus PS3]
gi|376168633|gb|EHS87381.1| Rhomboid family protein [Lactobacillus gastricus PS3]
Length = 221
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 20/173 (11%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++VTL GA + + ++ Q WRLIT ++H G+ H+L N + L +G +EQ FG +
Sbjct: 33 NTVTLLNFGA-EYTPLLVAGQWWRLITSAFVHIGIMHLLLNSIVLYYMGNYIEQLFGHWK 91
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSML---SELITNWTIYTNKHFLT 227
+ L+YIIS G+LLSA ++I+ G+S +FGL G+ + +E + + FL
Sbjct: 92 LILIYIISVISGNLLSAALSPTSIAAGSSTGIFGLFGAFIFLGAE-------HRQQSFLR 144
Query: 228 L-----VVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRP-QFGWVE 273
+ ++++ INL ++ P +D + H+GG ++GFL G +F P QFG +
Sbjct: 145 ILTRQYIILMIINLVFDLMSPSIDIWGHLGGLLAGFLAGALF--DPEQFGKIR 195
>gi|386725483|ref|YP_006191809.1| hypothetical protein B2K_25730 [Paenibacillus mucilaginosus K02]
gi|384092608|gb|AFH64044.1| hypothetical protein B2K_25730 [Paenibacillus mucilaginosus K02]
Length = 383
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL + GA + +D+ + WR IT +LH G H+ N+ +LL +G RLE+ G +R L
Sbjct: 224 TLVRFGA-KYNPYIDRGEYWRWITPIFLHIGGLHLWFNLTALLSLGGRLERGIGSLRFAL 282
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
Y+++G G++ S F S IS GASGA+FGL+G +L I + ++ + + +
Sbjct: 283 FYLLAGIAGNIASYTFSPS-ISAGASGAIFGLMGVLLVLSIMDPDLWGESGGMAIWGGLG 341
Query: 234 INLAVG-ILPHVDNFAH 249
+N+ +G I+P +DN+AH
Sbjct: 342 MNVVLGFIVPGIDNYAH 358
>gi|157363715|ref|YP_001470482.1| rhomboid family protein [Thermotoga lettingae TMO]
gi|157314319|gb|ABV33418.1| Rhomboid family protein [Thermotoga lettingae TMO]
Length = 228
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
+V + +RLIT ++HGG+ H+L N +L G +E +G + Y+ +G G++
Sbjct: 47 LVSDGEWYRLITAIFVHGGLLHLLFNSYALFYFGTIVESVYGPEKFIFSYLATGVVGNIA 106
Query: 186 SALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF--LTLVVIIAINLAVGILP- 242
+ LF ISVGASG++FGL+G + S T + K F L+ +I N+ G +P
Sbjct: 107 THLFYYRAISVGASGSIFGLVGILFSLGFRRDTPFFMKQFTGYALLPMILFNIIYGFIPG 166
Query: 243 -HVDNFAHIGGFISGFLLGFVFLIRPQF 269
++N AH+GGF G LLG++ RP +
Sbjct: 167 SGINNAAHVGGFALGMLLGYLLSPRPAY 194
>gi|312193973|ref|YP_004014034.1| rhomboid family protein [Frankia sp. EuI1c]
gi|311225309|gb|ADP78164.1| Rhomboid family protein [Frankia sp. EuI1c]
Length = 390
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
+ KH+ WRL+T +LHG V HI NM +L ++G +LE G +R L+ GG+
Sbjct: 216 DIAQKHEYWRLVTAAFLHGSVLHIAFNMYALFLLGTQLEAILGRVRYLALFFACAIGGNT 275
Query: 185 LS-ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LP 242
LS + + S GAS A+FG + + + TN+ +++++ INL + +
Sbjct: 276 LSYVIHDEKAFSYGASTAIFGFFAAYY-LIARRLRVNTNQ----ILIVVGINLLITFSIS 330
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRP 267
+D + HIGG +G +LG ++ P
Sbjct: 331 GIDKWGHIGGLATGVVLGLLYAYVP 355
>gi|220918079|ref|YP_002493383.1| rhomboid family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955933|gb|ACL66317.1| Rhomboid family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 360
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L +MGALD ++V D WRL+T +LH G H++ N+ + + +E+ G R +
Sbjct: 48 LARMGALDHARVWDGEP-WRLLTAAFLHVGPVHLVWNLAFGVPLCALVERAIGTRRFLAV 106
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLS---ELITNWTIYTNKHFLTLVVI 231
Y+ S GGS S + +S GASGALFG+ G+ML+ + +W + + L I
Sbjct: 107 YVASALGGSAAS-MLAAMPMSAGASGALFGVAGAMLALYRRAVGSWRAFLASRDIILNGI 165
Query: 232 IAINLAV-GILPHVDNFAHIGGFISGFLLGFV 262
+ + A+ G+ +D +AH GG +G LG++
Sbjct: 166 LLVGFALAGLFLPIDGWAHAGGLATGAWLGWI 197
>gi|85858972|ref|YP_461174.1| rhomboid family protein [Syntrophus aciditrophicus SB]
gi|85722063|gb|ABC77006.1| rhomboid family protein [Syntrophus aciditrophicus SB]
Length = 289
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 17/225 (7%)
Query: 96 RFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSL 155
R SF P LL PS+ +L +GA + + W LI+ ++LHGG+ HI NM +L
Sbjct: 77 RTSFNPLT---LLSPSNHSLFFLGATGTIPIDQYGRWWTLISASFLHGGILHIFFNMAAL 133
Query: 156 LVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELIT 215
+G + E+GF R ++Y I+G G LLS + ++GAS +L GL+G++L +
Sbjct: 134 SQLGTFVFHEYGFFRFLIIYTITGIAGFLLSYA-VGIPFTIGASASLCGLIGAILFYGKS 192
Query: 216 NWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
Y + + + G+L P ++N+AH GG +G L GF+ G+ ++
Sbjct: 193 RGGFYGETIYRQATGWVVGLVLFGLLVPGINNWAHGGGLAAGILTGFL------LGYEDK 246
Query: 275 RYALSGYSALSRRKFMTYQCILWIVSLVLVIVGLTLGLVMLLRGV 319
+ S + + C+L VS++L V TL ++ G+
Sbjct: 247 S------AENSLHRILGMACVLVTVSVLLWAVMQTLYTFFIISGI 285
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 29 HPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVS 88
H E + + Q + PP + G K VT+ + N+A F++T
Sbjct: 36 HCRECVAQGQAATRPPRTIAGARLGDKPVVTF---ALIAVNLAFFLVTA----------- 81
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHI 148
+ + S L G L ++V WRL+T +LHG + H+
Sbjct: 82 -------------LQSRSAMDLSYSELYLRGGLIPAEVASGEY-WRLLTSGFLHGNLVHL 127
Query: 149 LANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS-NISVGASGALFGLLG 207
NMLSL +GI LE+ G R+ +Y+IS G S+ LF ++++GASGA++GL+G
Sbjct: 128 ATNMLSLYWLGIPLERILGRGRMLTIYLISLLGASVSVLLFSAPVSLTIGASGAVYGLMG 187
Query: 208 SMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIR 266
++L+ LVVI+A+N+ + P + H+GGF++G ++G +
Sbjct: 188 ALLATFRR-----LRLDLRPLVVILALNVFITFSYPGLSWQGHLGGFVAGAIVGAAMVFP 242
Query: 267 PQFGWVEQRYA--------LSGYSALSRRKFMTYQCI 295
P+ ++ L+G + ++ + Y C+
Sbjct: 243 PRASRAAWQWGISIGLVVVLAGLTVVAADRIGAYYCL 279
>gi|331086792|ref|ZP_08335869.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409958|gb|EGG89393.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 209
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 98 SFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLV 157
SFQ E+ + + GA+ V +++ + +RL T +LH G H++ NM L V
Sbjct: 25 SFQGMTEDGIF------MFHHGAMYVPSMLEDGEYYRLFTSMFLHFGFEHLMNNMFILGV 78
Query: 158 IGIRLEQEFGFIRVGLLYIISGFGGSLLSA-LFIQSN---ISVGASGALFGLLGSMLSEL 213
IG LE E G + +Y++SG G+LLSA + IQ+ IS GASGA+FG++G++
Sbjct: 79 IGWNLELEIGKWKYLTVYLLSGLMGNLLSAWMDIQTGEYAISAGASGAIFGVIGALFYVA 138
Query: 214 ITNWTIYTNKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRPQF 269
+ N N L ++ +L +G VDN AHIGG ISG LL + + ++
Sbjct: 139 LRNRGRIGNISSRGLAFMVLCSLYLGFTSKGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|380797581|gb|AFE70666.1| inactive rhomboid protein 1, partial [Macaca mulatta]
Length = 151
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 28/177 (15%)
Query: 184 LLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGIL 241
L SA+F+ VG +G+ FG+L + EL +W I + F L+ ++ G+L
Sbjct: 1 LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL 60
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSL 301
P +DNFAHI GFISG L F FL FG + L R++ C + I +
Sbjct: 61 PWIDNFAHISGFISGLFLSFAFLPYISFGKFD----------LYRKR-----CQIIIFQV 105
Query: 302 VLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRTEPAFCSTTQDGNQLN 358
V + + L ++ V C WC +L+C+P + FC + QL+
Sbjct: 106 VFLGLLAGLVVLFYFYPV----RCEWCEFLTCIPFTD-------KFCEKYELDAQLH 151
>gi|408419938|ref|YP_006761352.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
gi|405107151|emb|CCK80648.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
Length = 247
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGA 120
++ + N+ MF+I++ + KN + PF +L PS L +GA
Sbjct: 19 VLKTMICVNVIMFIISLIYSG--KNI---------DLTLNPFY---VLTPSMDVLNFLGA 64
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGF 180
+V W LIT NWLHGG+ HIL NML+L + + E+G R+ +Y ++G
Sbjct: 65 SGRLPIVKFEAWWSLITANWLHGGLLHILFNMLALKTVAPLVMYEYGVCRMFTIYTLTGI 124
Query: 181 GGSLLSALFIQSNISVGASGALFGLLGSML---SELITNWTIYTNKHFLTLVVIIAINLA 237
G LLS + +++GAS L GL+G+ L W K T ++++ L
Sbjct: 125 AGFLLSYIG-NVYLTIGASSGLCGLIGAALYFGKSRGGQWGQLVYKQ--TSGWVLSLVLI 181
Query: 238 VGILPHVDNFAHIGGFISGFLLGFV 262
++P+++N+ H GG ISG LG+V
Sbjct: 182 GFLMPNINNWGHAGGLISGVFLGWV 206
>gi|449017499|dbj|BAM80901.1| unknown rhomboid family protein [Cyanidioschyzon merolae strain
10D]
Length = 458
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 109 GPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGF 168
GP+ V M V+ + + +RL T +LHG H++ N+ SL +G ++E +G
Sbjct: 272 GPAYV----MAGAKVNAAIRTGEWYRLFTPLFLHGNTLHLIVNLSSLKSLGPQIEATYGH 327
Query: 169 IRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTL 228
R LY++SG G+L S F + SVGAS A+FGL+G+M + ++N + +H +
Sbjct: 328 RRYAALYLLSGLTGNLFS-FFFNTAPSVGASSAIFGLIGAMAAFYVSNTDWFGREHSHRV 386
Query: 229 VVIIA----INLAVGILP--HVDNFAHIGGFISGFLLGFVFLIR 266
+ IA +NL G+ P +DNF H+GG + G + G +F R
Sbjct: 387 LRNIAWVTLLNLGQGLAPASRIDNFGHLGGLLGGAVFGVLFGPR 430
>gi|323694355|ref|ZP_08108528.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
gi|323501595|gb|EGB17484.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
Length = 209
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 5/156 (3%)
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
K GA+ ++ + +RL+T ++H G+ H++ NML L V+G LE+ G ++ + Y+
Sbjct: 39 KRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERALGKVKYLIFYL 98
Query: 177 ISGFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
+ G G +++S +S GASGA+FG++G ++ + N + L++++
Sbjct: 99 LCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLEDLSTQQLMILV 158
Query: 233 AINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRP 267
A+ L G VDN AH+GG + G LG +F +P
Sbjct: 159 AVTLYHGFTSTGVDNVAHVGGLLIGIFLGMIFYRKP 194
>gi|403380902|ref|ZP_10922959.1| rhomboid family protein [Paenibacillus sp. JC66]
Length = 201
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI-Q 191
WR +LH G H+L N +L V LE+ G R L Y++SGF GSL+S L + +
Sbjct: 62 WRYFASMFLHFGFMHLLMNCFALYVFAPPLERMIGSFRYLLFYLLSGFSGSLISYLLMSE 121
Query: 192 SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIG 251
+S GASGA++G+ + L I + + T+ I+ + L +LP V F H+G
Sbjct: 122 RTVSAGASGAVYGVFAAYLFLAIFRKDVLDAQSGQTIKTILIVGLIYSLLPGVSFFGHLG 181
Query: 252 GFISGFLLGFVF 263
GFI GF L +F
Sbjct: 182 GFIGGFALMAIF 193
>gi|326432700|gb|EGD78270.1| hypothetical protein PTSG_09335 [Salpingoeca sp. ATCC 50818]
Length = 475
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q +RLI ++ G H L +L+ L +G+ LE+ G+ R+ L+Y++S GG ++ +
Sbjct: 266 DQWYRLILAPFVPVGAVHHLVFLLAQLSLGVPLERAIGWTRLALIYLVSAIGGYTIAIIL 325
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVGILPHVDNF 247
+ G S ++GLL +L +L +W + + L+++ G+LP VDNF
Sbjct: 326 APYQVKAGPSPGVYGLLACLLLQLFESWKQVVSPGRELFKLLLLTTCAFIFGLLPFVDNF 385
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+ + GF+ G F FL F + S Y A R I I+ L V+
Sbjct: 386 SQLAGFVFGIAASFAFLPWQSFT------SKSFYRARKR--------IATIIGLGAVVAM 431
Query: 308 LTLGLVMLLRGVDANDHCSWCHYLSC 333
L + ML G A+ C C +C
Sbjct: 432 FALAIPMLFTGQTAD--CPQCWRFNC 455
>gi|392597473|gb|EIW86795.1| rhomboid-domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 338
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V V+ + + IT ++H G HI+ NM++ L + ++E+E G L Y +G
Sbjct: 127 QVVMVMGQSMNDKFITPIFIHAGFIHIILNMIAQLTVSAQIEREMGSAGFLLTYFAAGIF 186
Query: 182 GSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTI-YTNKHFLTLVVI-IAINLAV 238
G++L F + SVGASGA+FG + +L +W Y L + I + +A+
Sbjct: 187 GNVLGGNFSLVGAPSVGASGAIFGCVAVTWVDLFAHWRYQYRPGRKLAFMSIELVFGIAL 246
Query: 239 GILP-HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILW 297
G +P H AH+GG G L+G Y +S + ++ I+W
Sbjct: 247 GYIPSHRSISAHLGGLCMGLLVGTAL-----------------YPVISPTR--KHKSIMW 287
Query: 298 IVSLVLVIVGLTLGLVMLLRGVDAND---HCSWCHYLSCVPTS 337
+V + + + L V+L+R +D CS C YLSC+PTS
Sbjct: 288 GFRIVTIPLAIIL-FVVLIRNFYTSDPYAACSGCRYLSCIPTS 329
>gi|291229339|ref|XP_002734633.1| PREDICTED: rhomboid family member 1-like [Saccoglossus kowalevskii]
Length = 782
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 156 LVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELIT 215
+ I LE+ G++R+ L+Y++SG G+LLSA+FI VG + +LFG+L ++ E++
Sbjct: 634 MTILRDLEKLAGWLRISLIYMMSGVAGNLLSAIFIPYRAEVGPAASLFGILACLIVEVLQ 693
Query: 216 NWTIYTNK--HFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
+W + L L+ I+ + L +G+LP +DNFA IGGF SG LL F FL
Sbjct: 694 SWQLLEKPGIALLKLLGIVGVLLILGLLPWIDNFAAIGGFCSGILLAFTFL 744
>gi|451946059|ref|YP_007466654.1| putative membrane protein [Desulfocapsa sulfexigens DSM 10523]
gi|451905407|gb|AGF77001.1| putative membrane protein [Desulfocapsa sulfexigens DSM 10523]
Length = 281
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPL--LGPSSVTLQKM 118
++ V NIAMFV+++ ++ F +PL L PS+ +L +
Sbjct: 53 ILKVIVATNIAMFVLSLVID----------------LKHTGFSSSPLNFLSPSNNSLLIL 96
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+ + ++ W L++ N+LHG + H++ NM+++ IG L +E+G ++ ++Y +S
Sbjct: 97 GSTGTIPIFQLNRWWSLLSANYLHGSLLHLVFNMIAIYQIGPLLIREYGVSKMFIIYTLS 156
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV-IIAINLA 237
G GG +S++F ++GAS AL GL+G+ L + Y N + + + I L
Sbjct: 157 GIGGFFISSVF-GVRFTIGASAALCGLIGAALYYGKSRGGTYGNAIYNQIGGWALGIFLF 215
Query: 238 VGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
++P ++N+ H GG + G L G++ R +
Sbjct: 216 GFMVPGINNWGHGGGMLVGALSGYLLGYRER 246
>gi|413920156|gb|AFW60088.1| hypothetical protein ZEAMMB73_684125 [Zea mays]
Length = 132
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 55 KKWVTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVAR-FLGRFSFQPFKENPLLGPSSV 113
++W WL+ VA +A+F++TMYVN+CP ++ +C A FLGRF+FQP +ENPLLGPSS
Sbjct: 52 RRWSPWLVSGATVACVAIFLVTMYVNDCPTHNSNCAAAGFLGRFAFQPLRENPLLGPSSA 111
Query: 114 T 114
T
Sbjct: 112 T 112
>gi|116511000|ref|YP_808216.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris SK11]
gi|385837184|ref|YP_005874814.1| GlpG protein [Lactococcus lactis subsp. cremoris A76]
gi|414073474|ref|YP_006998691.1| Intramembrane serine protease, rhomboid family [Lactococcus lactis
subsp. cremoris UC509.9]
gi|116106654|gb|ABJ71794.1| Membrane-associated serine protease [Lactococcus lactis subsp.
cremoris SK11]
gi|358748412|gb|AEU39391.1| GlpG protein [Lactococcus lactis subsp. cremoris A76]
gi|413973394|gb|AFW90858.1| Intramembrane serine protease, rhomboid family [Lactococcus lactis
subsp. cremoris UC509.9]
Length = 230
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 15/158 (9%)
Query: 111 SSVTLQKMGA-LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L K GA L V D Q WRL+T N++H G H+L N+ +L IG ++E FG++
Sbjct: 40 SAFNLFKSGAILGQVMVFDPSQMWRLLTANFIHIGWAHVLLNVATLFFIGRQIENVFGWL 99
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH-FL-- 226
R L+Y++SG G+ + L +S GAS +LFGL +++ Y KH FL
Sbjct: 100 RFTLIYLLSGIFGNAMVFLLTPQVVSAGASTSLFGLFAAVVG------LAYFTKHPFLQQ 153
Query: 227 ---TLVVIIAINLAVGI--LPHVDNFAHIGGFISGFLL 259
V+I NL + + L +V +AHIGG I G LL
Sbjct: 154 IGRMFTVLIVANLVMNLFSLGNVSIWAHIGGAIGGLLL 191
>gi|323486504|ref|ZP_08091827.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|355629057|ref|ZP_09050194.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
gi|323400207|gb|EGA92582.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|354819380|gb|EHF03825.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
Length = 209
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 5/156 (3%)
Query: 117 KMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
K GA+ ++ + +RL+T ++H G+ H++ NML L V+G LE+ G ++ + Y+
Sbjct: 39 KRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERALGKVKYLIFYL 98
Query: 177 ISGFGGSLLSALFIQSN----ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
+ G G +++S +S GASGA+FG++G ++ + N + L++++
Sbjct: 99 LCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLEDLSTQQLMILV 158
Query: 233 AINLAVGILPH-VDNFAHIGGFISGFLLGFVFLIRP 267
A+ L G VDN AH+GG + G LG +F +P
Sbjct: 159 AVTLYHGFTSTGVDNAAHVGGLLIGIFLGMIFYRKP 194
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
K++ + + WRL+ +LH GV H++ANM +L V+G +LE +G R +LY++SG GG +
Sbjct: 70 KLIAQGELWRLVVPMFLHIGVIHLVANMYALWVVGPQLESLYGSARFTILYVLSGIGGFV 129
Query: 185 LSALFIQ-SNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV----------IIA 233
S F +I GASGALFG+ G++L +Y + + +V +A
Sbjct: 130 ASYFFAHPESIGAGASGALFGMFGALLV------FVYKYRSEIPPLVRATMRRGVWLTLA 183
Query: 234 INLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRP 267
+NL + +P + H+GG ++G L P
Sbjct: 184 LNLIITFSIPFISRSGHVGGLLTGICLALFIPYSP 218
>gi|377564810|ref|ZP_09794121.1| rhomboid family protein [Gordonia sputi NBRC 100414]
gi|377527964|dbj|GAB39286.1| rhomboid family protein [Gordonia sputi NBRC 100414]
Length = 234
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V + WRL+T +LH V HI NM+SL ++G LE G R ++Y I+ FGGS
Sbjct: 53 VANGEYWRLLTAGFLHFTVMHIALNMISLYILGRDLETALGHSRFLMVYFIALFGGSAAV 112
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-LPHV 244
LF N+ S GASGA++GL+G+ML ++ T ++ II INL + +P +
Sbjct: 113 MLFEAGNVRSAGASGAIYGLMGAMLVIVVKARISPTG-----VITIIVINLVFSVTMPGI 167
Query: 245 DNFAHIGGFISG 256
AH+GG + G
Sbjct: 168 SLAAHVGGLVFG 179
>gi|125623059|ref|YP_001031542.1| rhomboid-related protein 1 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389853384|ref|YP_006355628.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris NZ9000]
gi|124491867|emb|CAL96788.1| Rhomboid-related protein 1 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300069806|gb|ADJ59206.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 230
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 15/158 (9%)
Query: 111 SSVTLQKMGA-LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ L K GA L V D Q WRL+T N++H G H+L N+ +L IG ++E FG++
Sbjct: 40 SAFNLFKSGAILGQVMVFDPSQMWRLLTANFIHIGWAHVLLNVATLFFIGRQIENVFGWL 99
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKH-FL-- 226
R L+Y++SG G+ + L +S GAS +LFGL +++ Y KH FL
Sbjct: 100 RFTLIYLLSGIFGNAMVFLLTPQVVSAGASTSLFGLFAAVVG------LAYFTKHPFLQQ 153
Query: 227 ---TLVVIIAINLAVGI--LPHVDNFAHIGGFISGFLL 259
V+I NL + + L +V +AHIGG I G LL
Sbjct: 154 IGRMFTVLIVANLVMNLFSLGNVSIWAHIGGAIGGLLL 191
>gi|296111906|ref|YP_003622288.1| small hydrophobic molecule transporter protein [Leuconostoc kimchii
IMSNU 11154]
gi|339490819|ref|YP_004705324.1| small hydrophobic molecule transporter protein [Leuconostoc sp. C2]
gi|295833438|gb|ADG41319.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc kimchii IMSNU 11154]
gi|338852491|gb|AEJ30701.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc sp. C2]
Length = 229
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
H WRL+T +LH G H+ NML+L IG +E FG + +LY+ SG G++ S LF
Sbjct: 58 HDYWRLVTPLFLHAGFMHVFTNMLTLWFIGPLVESSFGSRKFLILYLFSGVIGNIFSYLF 117
Query: 190 IQSNISVGASGALFGLLGSMLSELIT-NWTIYTNKHFLTLVVIIAINLAVGILPH-VDNF 247
+SVGAS ALFGL G M+ I +++ +A+NL G +D +
Sbjct: 118 APLTVSVGASSALFGLFGGMILYAIQFKDDPRIRSQGTVMIMFVALNLVTGFATTGIDMW 177
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVL 303
HIGG + G + F + Y SG L R M + I+ ++ +V+
Sbjct: 178 GHIGGLVGGMI----------FTIIVGFYGRSGKYPLMMRITMIFVTIIILILMVI 223
>gi|452975048|gb|EME74867.1| rhomboid protease YggP [Bacillus sonorensis L12]
Length = 512
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL + GA + S ++ + WR +T LH G+ H++ N +LL +G E+ FG R
Sbjct: 207 NTETLIRFGAKENSLIL-AGEWWRFVTPIILHIGLIHLMFNTFALLSVGAAAERVFGSFR 265
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
++YI +G GS+ S LF S GASGA+FG LG++L +N + ++V
Sbjct: 266 FLIIYITAGVFGSIGSFLF-SPYPSAGASGAIFGCLGALLFLAFSNRKAFLKTIGTNIMV 324
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
+I +NL +G + ++DN HIGG + G L
Sbjct: 325 MIILNLGLGFAVSNIDNAGHIGGLVGGLL 353
>gi|297539145|ref|YP_003674914.1| Rhomboid family protein [Methylotenera versatilis 301]
gi|297258492|gb|ADI30337.1| Rhomboid family protein [Methylotenera versatilis 301]
Length = 346
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 8/131 (6%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRL T +LH G+ H+L N+ SL G +E+ +G +R +Y++SG G+L+S L IQ
Sbjct: 64 WRLGTAMFLHFGIIHLLVNVWSLWDAGQLVERMYGHLRFAGIYVLSGLTGNLVS-LVIQG 122
Query: 193 NISV--GASGALFGLLGSMLSELITNWTIYTNKHFLTL-----VVIIAINLAVGILPHVD 245
N +V GASGA+FG+ G++L+ L F L V +A + I+P +D
Sbjct: 123 NAAVSGGASGAIFGVYGALLTFLWRERQSIARHEFRWLFWGASVFSVATIVFGFIVPGID 182
Query: 246 NFAHIGGFISG 256
N AHIGGF++G
Sbjct: 183 NSAHIGGFLTG 193
>gi|146181679|ref|XP_001023246.2| Rhomboid family protein [Tetrahymena thermophila]
gi|146144109|gb|EAS03001.2| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 324
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA + ++ R +LHGG HI++N L LE++FGF + LLYI+S
Sbjct: 112 GAQYQPSITYNYEFHRYFVPIYLHGGFPHIISNTFGLFFYAFTLEKQFGFKKFVLLYILS 171
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI---- 234
G GG+L S +SVGAS +LFGL M+ LI N + N+ +V I+ +
Sbjct: 172 GLGGNLFSGYNQPEQMSVGASSSLFGLFPLMILFLIENQDMNKNQKLFYVVYILIMIFAN 231
Query: 235 ---------------NLAVGILPHVDNFAHIGGFISGFLLGFVF 263
N + +D AH+GGF++G + ++
Sbjct: 232 FFGSSSSPDQGQKKDNQDESDVRIIDTAAHLGGFLTGLCITIIY 275
>gi|314933721|ref|ZP_07841086.1| rhomboid family protein [Staphylococcus caprae C87]
gi|313653871|gb|EFS17628.1| rhomboid family protein [Staphylococcus caprae C87]
Length = 487
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++Y +SG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIVGSWRMLVIYFVSGLFGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHFLTLVV------IIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
S+ + +Y +K F V+ ++ + + +++ AH+GGFI G L+
Sbjct: 278 SIFA------IMYLSKTFDRKVIGQLLIALLILICLSLFMSNINIMAHLGGFIGGLLITL 331
Query: 262 V 262
+
Sbjct: 332 I 332
>gi|388852860|emb|CCF53545.1| uncharacterized protein [Ustilago hordei]
Length = 603
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 25/214 (11%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +R IT ++H G+ H+L N+L L + ++E+ G I L++ G GG+LL
Sbjct: 389 NPNQSYRFITAIFVHAGLVHVLFNLLVQLTLCAQIEKIIGSIAYILVWFAGGVGGNLLGG 448
Query: 188 LFIQ-SNISVGASGALFGLLGSMLSELITNWTI-YTNKHFLTLVVIIA-INLAVGILPHV 244
F S+GASGA++ + L +L+ NW Y K L + + A + LA+G+LP +
Sbjct: 449 NFGLIGQPSLGASGAIYTCISIELVDLVYNWKYEYRAKARLAMSLGFAVVGLALGLLPGL 508
Query: 245 DNFAHIGGFISGFLLGFVFL--IRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLV 302
DNFAHIGGF G L G +F I P S+ + +T+ +L I++L
Sbjct: 509 DNFAHIGGFCVGLLGGLIFAPSIHPN----------------SKHRVITW--VLRIIALA 550
Query: 303 LVIVGLTLGLVM-LLRGVDANDHCSWCHYLSCVP 335
L VG GL D C+WC YLSC+P
Sbjct: 551 LA-VGFFAGLASNFYSSPDPTKACTWCRYLSCLP 583
>gi|120600057|ref|YP_964631.1| rhomboid family protein [Shewanella sp. W3-18-1]
gi|120560150|gb|ABM26077.1| Rhomboid family protein [Shewanella sp. W3-18-1]
Length = 523
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
+ WRL+T +++HGG+ H++ N+ L +G +E G R+ L+Y++SG S+ S +
Sbjct: 371 EWWRLVTSSFIHGGLAHLVLNLYGLFFVGTFIEPLLGKWRLLLVYLVSGILASVASLCWY 430
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF---LTLVVIIAINLAVGILPHVD 245
+ ISVGASGA+ GL G + +I W K HF + + + + ++ G L VD
Sbjct: 431 DATISVGASGAIMGLFGIL---VIWVWKRVFAKEIHFILSINVAIFVTASVVSGFLGGVD 487
Query: 246 NFAHIGGFIS 255
N AHIGGF+S
Sbjct: 488 NAAHIGGFVS 497
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
+V K + WR+ + +LH G H+ NM SL + G LE+ G R +Y++SG G++
Sbjct: 51 LVQKGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKARFITIYLVSGIVGNMA 110
Query: 186 SALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHV 244
+ +F S+ S+GASGA+FG+ G+ + + L L +II + + P+V
Sbjct: 111 TYIFYDSSYASLGASGAIFGIFGAFGALVYYTRRTMPMLRKLILPIIIISVIMTFLQPNV 170
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ--FGWVEQRYA 277
+ FAH+GG ++GF+LG ++L P+ W +Q+ A
Sbjct: 171 NVFAHLGGLVTGFILGLIYL-HPKRILSWRKQKMA 204
>gi|374581478|ref|ZP_09654572.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
gi|374417560|gb|EHQ89995.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
Length = 313
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 92/155 (59%), Gaps = 4/155 (2%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
L + GA V+ ++ + WR T ++H G H++ N+ + +G +E+ FG R +
Sbjct: 162 LIEFGA-KVNSLIQAGEIWRFFTSMFIHIGFMHLIFNLYAFWSLGPFIEERFGHWRFFTI 220
Query: 175 YIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAI 234
Y +SG GGS +++ F +S GASGA+FGLLG++ I +++ + + LV+++ I
Sbjct: 221 YSLSGLGGS-IASFFFSPALSAGASGAIFGLLGALFYYSIKRPSLWKSGLGMNLVLVLLI 279
Query: 235 NLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
NL G+ +P +DNFAH+GG ++G + + L +P
Sbjct: 280 NLGFGLTMPGIDNFAHLGGLLTGIITS-ILLTKPD 313
>gi|341886049|gb|EGT41984.1| CBN-ROM-4 protein [Caenorhabditis brenneri]
Length = 1199
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
+Q +RL T ++H GVFH++ ++ I +E G R+ +LY +SG GG+L +A+F
Sbjct: 916 NQFYRLFTSLFVHAGVFHLVLTVIFQWYIMRDMEFMIGSTRMAILYFLSGIGGNLAAAIF 975
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV----VIIAINLAVGILPHVD 245
+ N +VG S A G++ + + +L + I N F T + +I A L VG++P VD
Sbjct: 976 VPYNPAVGPSSAQCGIIAANIVDLYHHRRILDN--FSTAIRQQWLISAFVLLVGLIPWVD 1033
Query: 246 NFAHIGGFISGFLLGFVFL 264
N+AH+ G I G L +
Sbjct: 1034 NWAHLFGSIVGLLTTIIIF 1052
>gi|357623886|gb|EHJ74866.1| hypothetical protein KGM_10434 [Danaus plexippus]
Length = 779
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 162 LEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI-- 219
LE+ G +R+ ++Y+ SG G++ SA+F VG +G+ FGLL ++ E+I W +
Sbjct: 603 LEKMAGPVRMAVIYLGSGVAGNMASAIFEPYRAEVGPAGSHFGLLACLIVEVIGAWPLLR 662
Query: 220 YTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+ + L L+ + +G+LP +DNFAH+ GF+ GFLL + L FG E+
Sbjct: 663 HPRRALLKLIGLALALFLLGLLPWIDNFAHVFGFVFGFLLSYALLPFITFGPYER----- 717
Query: 280 GYSALSRRKFMTYQCILWIVSLVLVIVGLTL-GLVMLLRGVDANDHCSWCHYLSCVP 335
RRK + ++W+ +V G L L+ L A + C+ C Y +C+P
Sbjct: 718 ------RRKIV----LVWV---CMVSAGAMLCALIALFYAAPAYE-CAACAYFTCLP 760
>gi|224011189|ref|XP_002295369.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583400|gb|ACI64086.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 148
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 12/148 (8%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
+D + WRL T +LH G+ H++ N++ + G R E+E+G + ++YI S FG S+LS
Sbjct: 1 IDDGEWWRLFTPIFLHAGLIHLVGNVMVQIESGNRWEKEWGSLIWLVVYIGSAFGSSILS 60
Query: 187 ALFIQSNISVGASGALFGLLGSMLSELI-----------TNWTIYTNKHFLTLVV-IIAI 234
+ I VG+SGA+ GL G+ +E++ + K LV+ I I
Sbjct: 61 VCVMPDQIGVGSSGAVMGLFGAKFAEILLMCCERSETRAERAGERSRKEQACLVIGGIII 120
Query: 235 NLAVGILPHVDNFAHIGGFISGFLLGFV 262
+A+ +P+VD AH+GG +GF++G V
Sbjct: 121 VMAMSFIPYVDWAAHLGGLCAGFVIGMV 148
>gi|386312683|ref|YP_006008848.1| rhomboid family protein [Shewanella putrefaciens 200]
gi|319425308|gb|ADV53382.1| Rhomboid family protein [Shewanella putrefaciens 200]
Length = 523
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
+ WRL+T +++HGG+ H++ N+ L +G +E G R+ L+Y++SG S+ S +
Sbjct: 371 EWWRLVTSSFIHGGLAHLVLNLYGLFFVGTFIEPLLGKWRLLLVYLVSGILASVASLCWY 430
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF---LTLVVIIAINLAVGILPHVD 245
+ ISVGASGA+ GL G + +I W K HF + + + + ++ G L VD
Sbjct: 431 DATISVGASGAIMGLFGIL---VIWVWKRVFAKEIHFILSINVAIFVTASVVSGFLGGVD 487
Query: 246 NFAHIGGFIS 255
N AHIGGF+S
Sbjct: 488 NAAHIGGFVS 497
>gi|227485794|ref|ZP_03916110.1| S54 family peptidase [Anaerococcus lactolyticus ATCC 51172]
gi|227236172|gb|EEI86187.1| S54 family peptidase [Anaerococcus lactolyticus ATCC 51172]
Length = 227
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 124 SKVVDKH-QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGG 182
SK++ H + WRLIT +++H G FHIL NM +G E+ FG ++Y+ISG G
Sbjct: 47 SKILVAHGEWWRLITASFIHIGFFHILFNMYFFYSLGPIFERLFGSFNFLIIYLISGIFG 106
Query: 183 SLLS-ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL-----TLVVIIAINL 236
+LLS AL +S GAS +L+G+LG + + T Y N + + + I+ IN+
Sbjct: 107 NLLSFALGSPYTVSAGASTSLYGMLGLAIGLMAT----YRNDEIIRSFGASFISIVVINV 162
Query: 237 AVGIL-PHVDNFAHIGGFISGFLLGFVF 263
+L P V + H+GGFI+GFLL +F
Sbjct: 163 VYSLLAPGVGVYGHLGGFIAGFLLAGIF 190
>gi|223043140|ref|ZP_03613187.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|417907800|ref|ZP_12551567.1| peptidase, S54 family [Staphylococcus capitis VCU116]
gi|222443351|gb|EEE49449.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|341594887|gb|EGS37565.1| peptidase, S54 family [Staphylococcus capitis VCU116]
Length = 487
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 89 CVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFH 147
C+ +L RFS V L ++G L VV H W RLI+ +LH H
Sbjct: 173 CMILYLNRFS-------------DVKLLEVGGLVHFNVV--HGEWYRLISSMFLHFNFEH 217
Query: 148 ILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLG 207
IL NMLSL + G +E G R+ ++Y +SG G+ +S F S ISVGASGA+FGL+G
Sbjct: 218 ILMNMLSLFIFGKIVESIVGSWRMLVIYFVSGLFGNFVSLSFNTSTISVGASGAIFGLIG 277
Query: 208 SMLSELITNWTIYTNKHFLTLVV------IIAINLAVGILPHVDNFAHIGGFISGFLLGF 261
S+ + +Y +K F V+ ++ + + +++ AH+GGFI G L+
Sbjct: 278 SIFA------IMYLSKTFDRKVIGQLLIALLILICLSLFMSNINIMAHLGGFIGGLLITL 331
Query: 262 V 262
+
Sbjct: 332 I 332
>gi|410898505|ref|XP_003962738.1| PREDICTED: inactive rhomboid protein 2-like [Takifugu rubripes]
Length = 559
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
KV D Q +RL +LH GV H +++ + I LE+ G++ + ++Y++SG G+L
Sbjct: 348 KVPD--QFYRLWLSLFLHEGVLHCAMSVVFQMTILRDLERLAGWVHISIIYLLSGITGNL 405
Query: 185 LSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILP 242
SA+ + VG +G+ FGLL + EL W + K FL L+V++ L G+LP
Sbjct: 406 ASAVVLPYRPEVGPAGSQFGLLACLFVELFQAWQVLEKPWKAFLELLVMLLFLLICGLLP 465
Query: 243 HVDNFAHIGGFISGFLLGFVFL 264
++N AHI GF SG LL F FL
Sbjct: 466 WINNIAHIFGFFSGLLLSFAFL 487
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGF 180
+D + V + Q +RL+T +LH V HI NMLSL IG LE G +R +Y++S
Sbjct: 106 VDPTSGVAEGQWYRLLTATFLHQNVMHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSAL 165
Query: 181 GGSLLSALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINL--A 237
GGS LS L N S+GASGA+FGLLG+ ++ Y ++ +V II +NL
Sbjct: 166 GGSALSFLLANPNAGSLGASGAVFGLLGATF--VLMRRLRYDSR---PIVAIIVLNLFFT 220
Query: 238 VGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+D AHIGG ++G ++ F + P+
Sbjct: 221 FAQTGTIDWRAHIGGLVTGAVVAFGMVHAPR 251
>gi|146292013|ref|YP_001182437.1| rhomboid family protein [Shewanella putrefaciens CN-32]
gi|145563703|gb|ABP74638.1| Rhomboid family protein [Shewanella putrefaciens CN-32]
Length = 523
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
+ WRL+T +++HGG+ H++ N+ L +G +E G R+ L+Y++SG S+ S +
Sbjct: 371 EWWRLVTSSFIHGGLAHLVLNLYGLFFVGTFIEPLLGKWRLLLVYLVSGILASVASLCWY 430
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HF---LTLVVIIAINLAVGILPHVD 245
+ ISVGASGA+ GL G + +I W K HF + + + + ++ G L VD
Sbjct: 431 DATISVGASGAIMGLFGIL---VIWVWKRVFAKEIHFILSINVAIFVTASVVSGFLGGVD 487
Query: 246 NFAHIGGFIS 255
N AHIGGF+S
Sbjct: 488 NAAHIGGFVS 497
>gi|300694566|ref|YP_003750539.1| rhomboid protease [Ralstonia solanacearum PSI07]
gi|299076603|emb|CBJ35939.1| putative rhomboid protease [Ralstonia solanacearum PSI07]
Length = 543
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQ 191
WRL++ +LH GV H+ N++ L GI +E+ +G L+Y+ +G GS LS F Q
Sbjct: 228 WRLLSATFLHAGVLHLAINVIGLYATGIAVERIYGPAAYLLIYLGAGLLGSALSLSFAAQ 287
Query: 192 SNISVGASGALFGLLGSMLSELIT---NWTIYTNKHFLT-LVVIIAINLAVGIL-PHVDN 246
I VGASGA+FG+ G+ L + +K LT L V + +L G+ P VDN
Sbjct: 288 HAIGVGASGAVFGVAGAWLMAICRYRGQMPETLSKRLLTQLGVFVLYSLVQGLTKPGVDN 347
Query: 247 FAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
AHIGG + G +L + R F R L G +A+
Sbjct: 348 AAHIGGLVGGCMLALILPAR--FDMDRYRRLLPGRAAM 383
>gi|379733579|ref|YP_005327084.1| putative rhomboid protease [Blastococcus saxobsidens DD2]
gi|378781385|emb|CCG01035.1| Putative rhomboid protease [Blastococcus saxobsidens DD2]
Length = 253
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V+ Q WRL+T +LH G+ H+ NML+LL+ G LE++ G R LY++S GGS
Sbjct: 85 VEFGQPWRLLTAAFLHIGLLHLALNMLALLIFGSELERQLGRWRYVGLYLVSALGGSTAI 144
Query: 187 ALFIQSNISV-GASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVD 245
LF V GAS A++GLLG++ ++ + ++V++AIN+ + LP V
Sbjct: 145 QLFGDPLRPVAGASTAIYGLLGALGVLMLVR-----RQDIRGILVLLAINVFISFLPGVS 199
Query: 246 NFAHIGGFISGFLLGFVFLI 265
H+GG ++G L +F++
Sbjct: 200 LLGHLGGLVTGAALAGLFVL 219
>gi|254549044|ref|ZP_05139491.1| putative integral membrane protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 247
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V Q +RL+T +LH G H+L NM +L V+G LE G +R G LY +S GGS+L
Sbjct: 69 VASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLV 128
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
L N + GASGA+FGL G + + ++ + + +V +I INLA L P +
Sbjct: 129 YLIAPLNTATAGASGAVFGLFG---ATFMVARRLHLDVRW--VVALIVINLAFTFLAPAI 183
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
H+GG ++G L+ ++ P+
Sbjct: 184 SWQGHVGGLVTGALVAATYVYAPR 207
>gi|15607252|ref|NP_214624.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
gi|31791288|ref|NP_853781.1| hypothetical protein Mb0114 [Mycobacterium bovis AF2122/97]
gi|121636023|ref|YP_976246.1| integral membrane protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659873|ref|YP_001281396.1| rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|167967299|ref|ZP_02549576.1| conserved integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|224988496|ref|YP_002643183.1| integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254366565|ref|ZP_04982609.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289441479|ref|ZP_06431223.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568003|ref|ZP_06448230.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289572690|ref|ZP_06452917.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289748582|ref|ZP_06507960.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289756172|ref|ZP_06515550.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289760210|ref|ZP_06519588.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|289764227|ref|ZP_06523605.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|294992953|ref|ZP_06798644.1| putative integral membrane protein [Mycobacterium tuberculosis 210]
gi|297632583|ref|ZP_06950363.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
4207]
gi|297729557|ref|ZP_06958675.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
R506]
gi|298527502|ref|ZP_07014911.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|306774194|ref|ZP_07412531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306778939|ref|ZP_07417276.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306782726|ref|ZP_07421048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306787094|ref|ZP_07425416.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306791651|ref|ZP_07429953.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306798472|ref|ZP_07436774.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306801688|ref|ZP_07438356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306805900|ref|ZP_07442568.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306974529|ref|ZP_07487190.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307082237|ref|ZP_07491407.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|313656884|ref|ZP_07813764.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
V2475]
gi|339630194|ref|YP_004721836.1| hypothetical protein MAF_01110 [Mycobacterium africanum GM041182]
gi|340625145|ref|YP_004743597.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|378769856|ref|YP_005169589.1| hypothetical protein BCGMEX_0114 [Mycobacterium bovis BCG str.
Mexico]
gi|385996882|ref|YP_005915180.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|386003192|ref|YP_005921471.1| hypothetical protein MRGA423_00715 [Mycobacterium tuberculosis
RGTB423]
gi|392384830|ref|YP_005306459.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|397671894|ref|YP_006513428.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|424806593|ref|ZP_18232024.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|433625211|ref|YP_007258840.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|31616873|emb|CAD92975.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491670|emb|CAL70128.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134152077|gb|EBA44122.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148504025|gb|ABQ71834.1| Rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|224771609|dbj|BAH24415.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414398|gb|EFD11638.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289537121|gb|EFD41699.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289541756|gb|EFD45405.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689169|gb|EFD56598.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696759|gb|EFD64188.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289711733|gb|EFD75749.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|289715774|gb|EFD79786.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|298497296|gb|EFI32590.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|308217202|gb|EFO76601.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308328061|gb|EFP16912.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308332433|gb|EFP21284.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308336197|gb|EFP25048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308339800|gb|EFP28651.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308341295|gb|EFP30146.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308347577|gb|EFP36428.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308351519|gb|EFP40370.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308356167|gb|EFP45018.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360107|gb|EFP48958.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|326905869|gb|EGE52802.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|339329550|emb|CCC25185.1| putative conserved integral membrane protein [Mycobacterium
africanum GM041182]
gi|340003335|emb|CCC42454.1| putative conserved integral membrane protein [Mycobacterium
canettii CIPT 140010059]
gi|341600039|emb|CCC62707.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344217928|gb|AEM98558.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|356592177|gb|AET17406.1| Conserved integral membrane protein [Mycobacterium bovis BCG str.
Mexico]
gi|378543381|emb|CCE35652.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|380723680|gb|AFE11475.1| putative integral membrane protein [Mycobacterium tuberculosis
RGTB423]
gi|395136798|gb|AFN47957.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|432152817|emb|CCK50026.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|440579558|emb|CCG09961.1| putative CONSERVED INTEGRAL membrane protein [Mycobacterium
tuberculosis 7199-99]
gi|444893582|emb|CCP42835.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
Length = 249
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V Q +RL+T +LH G H+L NM +L V+G LE G +R G LY +S GGS+L
Sbjct: 71 VASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLV 130
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
L N + GASGA+FGL G + + ++ + + +V +I INLA L P +
Sbjct: 131 YLIAPLNTATAGASGAVFGLFG---ATFMVARRLHLDVRW--VVALIVINLAFTFLAPAI 185
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
H+GG ++G L+ ++ P+
Sbjct: 186 SWQGHVGGLVTGALVAATYVYAPR 209
>gi|70726368|ref|YP_253282.1| hypothetical protein SH1367 [Staphylococcus haemolyticus JCSC1435]
gi|68447092|dbj|BAE04676.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 485
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 10/241 (4%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S V L +G L VV H W RLIT +LH HIL NMLSL + G +E G +
Sbjct: 181 SDVKLLDLGGLVHFNVV--HGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVESIVGPL 238
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ +Y+ISG G+ +S F +SVGASGA+FGL+GS+ + + + T Y+ K ++
Sbjct: 239 RMLGIYVISGLLGNFISLSFNLHTVSVGASGAIFGLIGSIFAMMFVSKT-YSKKTIGQML 297
Query: 230 VIIAINLAVGI-LPHVDNFAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSGYSALS 285
+ + + + + + + +++ AH+GGFI G L+G+ F W+ L + AL
Sbjct: 298 IALLVLIVLSLFMSNINIMAHLGGFIGGVLITLIGYYFTHNRNLFWIFLIILLVLFVALQ 357
Query: 286 RRKFMTYQCILW--IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCRT 343
R F + ++ ++ ++ ++ +D +YL + T+ S R
Sbjct: 358 VRIFTIKEENIYDKLIEDAILDYNYKEASSIVNHTIDKGYDDDRTYYLKGLITAATSSRA 417
Query: 344 E 344
E
Sbjct: 418 E 418
>gi|433640241|ref|YP_007286000.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
gi|432156789|emb|CCK54054.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
Length = 249
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V Q +RL+T +LH G H+L NM +L V+G LE G +R G LY +S GGS+L
Sbjct: 71 VASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLV 130
Query: 187 ALFIQSNI-SVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
L N + GASGA+FGL G + + ++ + + +V +I INLA L P +
Sbjct: 131 YLIAPLNTATAGASGAVFGLFG---ATFMVARRLHLDVRW--VVALIVINLAFTFLAPAI 185
Query: 245 DNFAHIGGFISGFLLGFVFLIRPQ 268
H+GG ++G L+ ++ P+
Sbjct: 186 SWQGHVGGLVTGALVAATYVYAPR 209
>gi|335357178|ref|ZP_08549048.1| rhomboid family integral membrane protein [Lactobacillus animalis
KCTC 3501]
Length = 224
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 92/153 (60%), Gaps = 10/153 (6%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++V L GA + ++ + + WRL T ++H G+ H+ N+L+L +G++LEQ FG R
Sbjct: 33 NAVNLIAWGA-KYNPLIIQGELWRLFTPMFIHIGLEHLALNLLTLYFLGVQLEQLFGKWR 91
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELI--TNWTIYTNKHFL 226
LY+ISG GG++LS + +NIS GAS +LFGL G+ ML E + ++ FL
Sbjct: 92 FLALYLISGVGGNILS-FALSNNISAGASTSLFGLFGAYLMLGESFRQNQYIRMISRQFL 150
Query: 227 TLVVI-IAINLAVGILPHVDNFAHIGGFISGFL 258
L+V+ + +L G +D + H+GG ++GFL
Sbjct: 151 VLIVLNLGFDLFAG---GIDIWGHLGGLLAGFL 180
>gi|408790096|ref|ZP_11201729.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
florum 2F]
gi|408520670|gb|EKK20705.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
florum 2F]
Length = 222
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
S+ L + GA + ++ Q WRL+T +LH G+ H+L N L+L +G LE+ G R
Sbjct: 37 SAAVLLRYGA-QSNPLIQAGQWWRLVTPIFLHIGLQHLLLNCLTLFYVGNLLEKTVGHFR 95
Query: 171 VGLLYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLS-ELITNWTIYTNKHFLTL 228
+L++ SG GG+L S F N IS G+S A+FGLLG L L+ + + +T
Sbjct: 96 YLVLFLGSGIGGNLFS--FAAGNVISAGSSTAIFGLLGVFLMLSLVVRGNLLITETGITF 153
Query: 229 VVIIAINLAVG-ILPHVDNFAHIGGFISGFLLGFV 262
V + +NL +P +D + H+GG ++GF L FV
Sbjct: 154 AVFVGLNLLTDFFVPQIDIWGHLGGLLTGFCLAFV 188
>gi|303275255|ref|XP_003056925.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461277|gb|EEH58570.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 392
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 6/150 (4%)
Query: 118 MGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYII 177
MGA V+ + Q +RL+T LHG H+L N +SL +G +E++FG LY+
Sbjct: 203 MGA-KVNAEIAAGQVYRLVTPLLLHGSPLHLLVNCMSLHNLGPVIERQFGRDSFVGLYLA 261
Query: 178 SGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIY---TNKHFLTLVVIIAI 234
SG GG+ LS +N +VGASGA+FGL+G+M L + ++ ++ +L+ + +
Sbjct: 262 SGIGGNYLSYKMCPNN-AVGASGAIFGLVGAMGVYLHRHSDLFGAVGDRQLQSLLGSVGV 320
Query: 235 NLAVGILP-HVDNFAHIGGFISGFLLGFVF 263
N G++ +DN+AH+GGF++G + F
Sbjct: 321 NALFGMMSRRIDNWAHLGGFLTGAFVAAAF 350
>gi|323340676|ref|ZP_08080928.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335996819|ref|ZP_08562736.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|417974323|ref|ZP_12615144.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
gi|323091799|gb|EFZ34419.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335351889|gb|EGM53380.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|346329320|gb|EGX97618.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
Length = 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L + GA + + V + WRL+T +LH G+ H+ NML+L IG LE G +R +
Sbjct: 36 VLVRFGA-NFAPYVSNGEYWRLLTAMFLHIGLEHLALNMLTLYFIGASLEPILGSVRFAV 94
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELITN--WTIYTNKHFLTLV 229
LY++SG G ++ + + +S GAS ALFGL G+ ML E N + + FL LV
Sbjct: 95 LYLVSGICGD-AASYSLTNGLSAGASTALFGLFGAYLMLGESFRNNAYIKMMARQFLLLV 153
Query: 230 VIIAINLAVGILPH-VDNFAHIGGFISGFLLGFV 262
V +N+ +D + HIGG +SGFL G+V
Sbjct: 154 V---LNIFFDFFSSGIDIWGHIGGLLSGFLFGYV 184
>gi|332880624|ref|ZP_08448298.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357046009|ref|ZP_09107639.1| peptidase, S54 family [Paraprevotella clara YIT 11840]
gi|332681612|gb|EGJ54535.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355531015|gb|EHH00418.1| peptidase, S54 family [Paraprevotella clara YIT 11840]
Length = 476
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P +V L GA D + + WR++TCN++H G+ H+ NM +LL IG+ LE G
Sbjct: 83 PDNVDLLHWGA-DFAPLTLTGDYWRVLTCNYVHVGLIHLAMNMYALLFIGLFLEPLAGSR 141
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--T 227
R+ + Y++SG SL S I+ GASGA+FGL G + L+ + L +
Sbjct: 142 RMAMAYVLSGLYASLASLSVNAEWIAAGASGAIFGLYGLFFAYLLLRRGGEERRKTLLIS 201
Query: 228 LVVIIAINLAVGILPH-VDNFAHI 250
+ V I NL G+ VDN AH+
Sbjct: 202 IAVFILYNLLFGMRDDSVDNAAHV 225
>gi|366085766|ref|ZP_09452251.1| membrane-associated serine protease [Lactobacillus zeae KCTC 3804]
Length = 229
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 8/133 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRLIT ++H G+ HIL N SL +G E+ FG R LLY ISGF G++ S F
Sbjct: 58 QWWRLITPVFVHIGLTHILMNGFSLYFLGEMTERLFGHWRFFLLYFISGFAGNVASFAFS 117
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYT--NKHFLTLVVIIAINLAVGILPH-VD 245
+ ++ GAS A+FGLLG+ ML + + + ++ FL LVV +NLA + VD
Sbjct: 118 PNTLAAGASTAIFGLLGACLMLGDTYRDNPVIRQLSRQFLLLVV---LNLAFNLFSSGVD 174
Query: 246 NFAHIGGFISGFL 258
+ HIGG + GFL
Sbjct: 175 IYGHIGGVLGGFL 187
>gi|417937077|ref|ZP_12580383.1| peptidase, S54 family [Streptococcus infantis X]
gi|343399519|gb|EGV12041.1| peptidase, S54 family [Streptococcus infantis X]
Length = 230
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 111 SSVTLQKMGALDVSKV-VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ TL K GA+ + Q WRL + ++H G+ H L NMLSL +G ++EQ FG
Sbjct: 42 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLQHFLVNMLSLYFLGRQMEQIFGSK 101
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
+ +Y++SG G+L +F I+ GAS AL+G+ S++ + Y + + +
Sbjct: 102 QFFFIYLLSGMMGNLFVLVFSPDAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 161
Query: 230 VIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
++ INL +L P + H+GG + G LL VF +R
Sbjct: 162 SLLVINLVGSVLIPGISLAGHLGGAVGGALLAIVFPVR 199
>gi|229916284|ref|YP_002884930.1| rhomboid family protein [Exiguobacterium sp. AT1b]
gi|229467713|gb|ACQ69485.1| Rhomboid family protein [Exiguobacterium sp. AT1b]
Length = 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL GA V+ ++++ + WRLIT +LH G FH NM +L +G +E+ +G IR +
Sbjct: 170 TLVAFGA-KVNPLIEQGEWWRLITPMFLHIGWFHFAINMFALWSLGPLVERMYGSIRFLI 228
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
+Y++SG + S F +S IS GASGALFGL+G++L + + +++ L +++
Sbjct: 229 IYLLSGILATSASFAFSES-ISAGASGALFGLVGALLYFGLRDRSLFMKTLGPPLFIMLG 287
Query: 234 INLAVGIL--PHVDNFAHIGGFI 254
+N+ + + +D+FAH GG I
Sbjct: 288 LNVGLAFVLGAGLDHFAHAGGLI 310
>gi|239827720|ref|YP_002950344.1| rhomboid family protein [Geobacillus sp. WCH70]
gi|239808013|gb|ACS25078.1| Rhomboid family protein [Geobacillus sp. WCH70]
Length = 389
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 10/138 (7%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
++ + + WR T +LH G H+L N +L +G+ +E+ +G R +Y+I+GF G+L
Sbjct: 222 LIQEGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYLIAGFFGTLG 281
Query: 186 SALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT----LVVIIAINLAVGIL 241
S LF S +S GASGA+FGL G++L T+Y + F T ++ +I INL GI+
Sbjct: 282 SFLFTTS-LSAGASGAIFGLFGALLY----FGTVYRHLFFQTIGTNIIGLIIINLLFGIM 336
Query: 242 -PHVDNFAHIGGFISGFL 258
P +DN HIGG I GFL
Sbjct: 337 VPGIDNAGHIGGLIGGFL 354
>gi|441213690|ref|ZP_20975936.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
gi|440625654|gb|ELQ87500.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
Length = 250
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L++ AL + + + +RL+T +LH G H+L NM +L V+G LEQ G +R G+
Sbjct: 59 ALKRELALQPASIAAYDEYYRLVTSMFLHYGAMHLLFNMWALYVVGPPLEQWLGRLRFGV 118
Query: 174 LYIISGFGGSLLSALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVII 232
LY +SG GGS+L + N + GASGA+FGL G++ + N + VI+
Sbjct: 119 LYALSGLGGSVLVYMLSPLNSATAGASGAIFGLFGAIFVV-----ARHLNLDVRAIGVIV 173
Query: 233 AINLAVGILPHVDNFA-----HIGGFISGFLLGFVFLIRPQFGWVEQRYA 277
INL + A HIGG ++G L+ F+ P+ E+R A
Sbjct: 174 VINLVFTFVGPALGTAISWQGHIGGLVTGALVASAFVYAPR----ERRTA 219
>gi|300698196|ref|YP_003748857.1| putative rhomboid protease [Ralstonia solanacearum CFBP2957]
gi|299074920|emb|CBJ54489.1| putative rhomboid protease [Ralstonia solanacearum CFBP2957]
Length = 543
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
NPL P V G + + V + WRL++ +LH GV H+ NM L G+ +E+
Sbjct: 202 NPLQTPIGVLFSLGG--NAAFEVQHGEWWRLLSATFLHAGVLHLAINMFGLYATGVAVER 259
Query: 165 EFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSMLSELITNWTIYT-- 221
+G + L+Y+ +G GS LS F Q I VGASGA+FG+ G+ L + ++
Sbjct: 260 IYGPVAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIGRYRSLMPQT 319
Query: 222 -NKHFLT-LVVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIR 266
+K LT L + + +L G+ P VDN AHIGG G +L + R
Sbjct: 320 LSKRLLTQLGLFVLYSLVQGLTKPGVDNAAHIGGLAGGCMLAMILPAR 367
>gi|257064883|ref|YP_003144555.1| membrane protein [Slackia heliotrinireducens DSM 20476]
gi|256792536|gb|ACV23206.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 267
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL G L S ++D Q + LIT +LHGG+ H+L NM+++ IG +E FG +R +
Sbjct: 35 TLYNAGVLTTSSLLDG-QYYTLITSMFLHGGLMHLLCNMITMYYIGTVIEDVFGPVRFLI 93
Query: 174 LYIISGFGGSLLS-ALFIQSNIS---VGASGALFGLLGSMLSELITNW---TIYTN---- 222
+Y +SG G L S A+ I + + VGASGALFGL G+ L+ ++
Sbjct: 94 IYFLSGIAGGLTSMAVMIAAGENGGVVGASGALFGLFGAYGYLLVREHRKPVVFMRPTSS 153
Query: 223 ---KHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL 258
K F +V +N+ +G+ P + AHIGG I G L
Sbjct: 154 SDLKGFFGFLV---LNIIIGLTPGIAMEAHIGGMICGLL 189
>gi|337749843|ref|YP_004644005.1| hypothetical protein KNP414_05611 [Paenibacillus mucilaginosus
KNP414]
gi|336301032|gb|AEI44135.1| hypothetical protein KNP414_05611 [Paenibacillus mucilaginosus
KNP414]
Length = 383
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL + GA + +D+ + WR IT +LH G H+ N +LL +G RLE+ G +R L
Sbjct: 224 TLVRFGA-KYNPYIDRGEYWRWITPIFLHIGGLHLWFNSTALLSLGGRLERGIGSLRFAL 282
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
Y+++G G++ S F S IS GASGA+FGL+G +L I + ++ + + +
Sbjct: 283 FYLLAGIAGNIASYTFSPS-ISAGASGAIFGLMGVLLVLSIMDPDLWGESGGMAIWGGLG 341
Query: 234 INLAVG-ILPHVDNFAH 249
+N+ +G I+P +DN+AH
Sbjct: 342 MNVVLGFIVPGIDNYAH 358
>gi|422418937|ref|ZP_16495892.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
gi|313633378|gb|EFS00218.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
Length = 414
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ H+ +N + L ++G E+ +G R L+ II G G++ S +
Sbjct: 133 WRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGICGNIAS-FALNM 191
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+S+GAS A+F ++G++L ++ +Y +++ ++A+NL + + +D HIG
Sbjct: 192 NLSIGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFSSQIDIAGHIG 251
Query: 252 GFISGFLLGFVFLIRPQF-GWVEQRYALS 279
G + GFLL + QF W Y LS
Sbjct: 252 GLVGGFLLAGALSLPNQFLHWRRLAYGLS 280
>gi|422421998|ref|ZP_16498951.1| rhomboid family protein, partial [Listeria seeligeri FSL S4-171]
gi|313638066|gb|EFS03339.1| rhomboid family protein [Listeria seeligeri FSL S4-171]
Length = 424
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ H+ +N + L ++G E+ +G R L+ II G G++ S +
Sbjct: 143 WRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGICGNIAS-FALNM 201
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+S+GAS A+F ++G++L ++ +Y +++ ++A+NL + + +D HIG
Sbjct: 202 NLSIGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFSSQIDIAGHIG 261
Query: 252 GFISGFLLGFVFLIRPQF-GWVEQRYALS 279
G + GFLL + QF W Y LS
Sbjct: 262 GLVGGFLLAGALSLPNQFLHWRRLAYGLS 290
>gi|156085302|ref|XP_001610128.1| rhomboid 4 [Babesia bovis]
gi|154797380|gb|EDO06560.1| rhomboid 4 [Babesia bovis]
Length = 314
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN 222
+Q++GF+R L++ISG GG+L A+ ++VG+SGA++GL G+M+ I W
Sbjct: 4 KQDWGFMRTMGLFLISGIGGNLTGAVLSPCGLTVGSSGAMYGLYGAMIPYCIEYWNTIPR 63
Query: 223 KHFLTL--VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFV 262
FL ++ + I +G+ P+VDN+ HIGG + G L GF
Sbjct: 64 PVFLFCYNIITLIIGFLMGLAPNVDNYCHIGGCVFGMLWGFA 105
>gi|168058279|ref|XP_001781137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667455|gb|EDQ54085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 10/158 (6%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V+ ++DK Q WR +T + LH + H+L N SL +G +E G R +Y +S
Sbjct: 211 KVNSLIDKGQWWRFVTPSVLHANIMHLLVNCYSLNSVGPTVESLSGGKRFLAIYAVSAIA 270
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVG 239
S LS + SVGASGA+FGL+G++ L + T I ++ + +IAINL G
Sbjct: 271 SSGLSYTLCTAP-SVGASGAIFGLVGALAVFLARHKTLMIGGDQSLAQVARVIAINLGFG 329
Query: 240 ILPH-VDNFAHIGGFISG----FLLG--FVFLIRPQFG 270
+L +DN+ H+GG G +LLG F F P+ G
Sbjct: 330 LLSSGIDNWGHVGGLFGGAAVAWLLGPAFSFEYAPKLG 367
>gi|421276262|ref|ZP_15727085.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
gi|395878215|gb|EJG89282.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
Length = 224
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 111 SSVTLQKMGALDVSKV-VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ TL K GA+ + Q WRL + ++H G+ H L NMLSL +G ++E FG
Sbjct: 36 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFLVNMLSLYFLGRQMEDIFGSK 95
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
+ +Y++SG G+L +F + I+ GAS AL+G+ S++ + Y + + +
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 155
Query: 230 VIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
++ INL +L P + H+GG + G LL VF +R E++ G LS
Sbjct: 156 SLLVINLVGSVLIPGISLAGHLGGAVGGALLAIVFPVRG-----ERKIYSPGQRGLSTLA 210
Query: 289 FMTYQCILWIVSL 301
F+ +L + L
Sbjct: 211 FIALSALLLFIGL 223
>gi|379722713|ref|YP_005314844.1| hypothetical protein PM3016_4963 [Paenibacillus mucilaginosus 3016]
gi|378571385|gb|AFC31695.1| hypothetical protein PM3016_4963 [Paenibacillus mucilaginosus 3016]
Length = 383
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL + GA + +D+ + WR IT +LH G H+ N +LL +G RLE+ G +R L
Sbjct: 224 TLVRFGA-KYNPYIDRGEYWRWITPIFLHIGGLHLWFNSTALLSLGGRLERGIGSLRFAL 282
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
Y+++G G++ S F S IS GASGA+FGL+G +L I + ++ + + +
Sbjct: 283 FYLLAGIAGNIASYTFSPS-ISAGASGAIFGLMGVLLVLSIMDPDLWGESGGMAIWGGLG 341
Query: 234 INLAVG-ILPHVDNFAH 249
+N+ +G I+P +DN+AH
Sbjct: 342 MNVVLGFIVPGIDNYAH 358
>gi|405968549|gb|EKC33613.1| Rhomboid family member 1 [Crassostrea gigas]
Length = 972
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
Q WRL H G+ H L + + ++ ++E G++R+ +LYI+ G GG L + +F
Sbjct: 772 QQWWRLPLSLLYHYGIIHCLLVVGAQSLLLRQIEITIGWLRMMILYIVCGCGGLLAAVIF 831
Query: 190 IQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILPHVDNF 247
VGA+GALFG +G + EL+ W+I + L+ I+A+ + G LP+++ F
Sbjct: 832 NPYQPHVGATGALFGAVGLLFVELVHFWSIIRRPWLELIKLLTIMAVFIFSGTLPYLNIF 891
Query: 248 AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVG 307
+ + G + G L L Y ++ R K + C + +V++ + +V
Sbjct: 892 SILAGLLLGMLCALGLL---------------PYISIKRHKAL---CRIVVVAVSIPLV- 932
Query: 308 LTLGLVM--LLRGVDANDHCSWCHYLSCVPTSRWSCR 342
+T+ VM + V ++C +C +++C P + C+
Sbjct: 933 ITIFFVMFYVFYRVQLLENCKFCKFVNCYPYTENMCK 969
>gi|323509613|dbj|BAJ77699.1| cgd3_980 [Cryptosporidium parvum]
gi|323510471|dbj|BAJ78129.1| cgd3_980 [Cryptosporidium parvum]
Length = 282
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Query: 108 LGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG 167
L P TL K A V +V + Q WRL+ +LH ++HI+ N++ + + + E ++G
Sbjct: 71 LSPFVTTLIKFQA-SVPSLVKEGQVWRLLVSLFLHASIWHIVFNIIFQIRLSLSCEVKYG 129
Query: 168 FIRVGLLYIISGFGGSLLSALFIQS-NISVGASGALFGLLGSMLSELITNWTIYTNKHFL 226
I +Y ISG G+L S S ++VGAS + FGL+G+ L+ELI W NK +
Sbjct: 130 RILNFTIYFISGLLGNLFSVAIRSSCVVAVGASTSGFGLIGAQLAELILFWHTLQNKEQV 189
Query: 227 TLVVIIAINLAVGIL-----PHVDNFAHIGGFISGFLLGFV 262
+ +++ L + I +D++ HIGGF+SG LG +
Sbjct: 190 VINILLFGILMILITWGNPSSAIDHWGHIGGFVSGTCLGII 230
>gi|88800271|ref|ZP_01115838.1| hypothetical protein MED297_14685 [Reinekea blandensis MED297]
gi|88776986|gb|EAR08194.1| hypothetical protein MED297_14685 [Reinekea sp. MED297]
Length = 209
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
+L +GA + S VD Q WRL T ++H G+ H++ N +S L +G LE G + +
Sbjct: 41 SLYWLGA-NFSPWVDAGQWWRLGTSIFVHFGLMHLVFNSVSTLFLGRFLEPLLGHVAFIV 99
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTI--YTNKHFLTLVVI 231
+++ +G S+ S +F + S GASGA+FGL G + +++N N+ ++ VI
Sbjct: 100 VFLTTGLCASMASYVFNKEVYSAGASGAVFGLFGLFIVLVLSNLVRPEVRNEWLKSIGVI 159
Query: 232 IAINLAVGILPHVDNFAHIGGFISGFLLGFVFL 264
+ INL +G++ VDN AH+GG SG + G + L
Sbjct: 160 LVINLGMGLVLPVDNAAHLGGLASGLVAGVIAL 192
>gi|89894371|ref|YP_517858.1| hypothetical protein DSY1625 [Desulfitobacterium hafniense Y51]
gi|219668797|ref|YP_002459232.1| rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|423073963|ref|ZP_17062698.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
gi|89333819|dbj|BAE83414.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539057|gb|ACL20796.1| Rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|361855174|gb|EHL07168.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
Length = 327
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
V+ ++ + + WRL T +LH G H+ N+ +L +G E+ G +R +YI+SG
Sbjct: 183 KVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGAIAEELLGRVRYITVYILSGIL 242
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
GS+ S F IS GASGA+FG+LG+++ ++ + +L V++ INL +G
Sbjct: 243 GSVAS-FFFTDAISAGASGAIFGILGALVVYSRRKPFLWKSGFGKSLAVVVLINLGLGFF 301
Query: 242 PH-VDNFAHIGGFISGFLLGFVFLI 265
+D +AH+GG ++G L F +LI
Sbjct: 302 QTGIDVYAHLGGLVTGML--FTWLI 324
>gi|348526183|ref|XP_003450600.1| PREDICTED: rhomboid-related protein 2-like [Oreochromis niloticus]
Length = 506
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ + WR I+ ++H GV HIL N+L LV+GI LE VG++Y+ GSL S++
Sbjct: 320 RQEAWRFISYMFVHAGVQHILGNLLMQLVVGIALELVHKGFEVGMVYLSGVLAGSLASSI 379
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWT--IYTNKHFLTLVVIIAINLAVG------I 240
F + VGASG ++ LLG + N+ I F L +++ + L G
Sbjct: 380 FDPLSALVGASGGVYALLGGYFMNAVVNFREMIPLLGVFRILFIVVFVGLDFGFAFYRRF 439
Query: 241 LPHVDNF-----AHIGGFISGFLLGFVFL 264
+ H D AH GG ++G +G+VF
Sbjct: 440 VKHEDGLQVSFVAHFGGIVAGMTVGYVFF 468
>gi|409350266|ref|ZP_11233445.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
gi|407877534|emb|CCK85503.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
Length = 224
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 99 FQPFKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F L+G S T L KMGA+ VV + Q WRL T +LH G+ HI +N + +
Sbjct: 19 FLVFIAETLIGGSESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIY 78
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM 209
IG E FG R +LY++SG GGSLL+ F IS GAS ALFG+LG+M
Sbjct: 79 YIGQYAEPIFGHWRFLVLYLLSGTGGSLLTLAFGSDQAISAGASTALFGILGAM 132
>gi|417938970|ref|ZP_12582263.1| peptidase, S54 family [Streptococcus infantis SK970]
gi|343390415|gb|EGV02995.1| peptidase, S54 family [Streptococcus infantis SK970]
Length = 224
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 111 SSVTLQKMGALDVSKV-VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S+ TL + GA+ + Q WRL + ++H G+ H L NMLSL +G ++EQ FG
Sbjct: 36 SAATLYQFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFLVNMLSLYFLGRQMEQIFGSK 95
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
+ +Y++SG G+L +F + I+ GAS AL+G+ S++ + Y + + +
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 155
Query: 230 VIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
++ INL +L P + H+GG + G LL VF +R E++ G L+
Sbjct: 156 SLLVINLVGSVLIPGISLAGHLGGAVGGALLAIVFPVRG-----ERKIYSPGQRGLATLA 210
Query: 289 FMTYQCILWIVSLV 302
F+ +L + L+
Sbjct: 211 FIALSALLLFIGLL 224
>gi|269793370|ref|YP_003312825.1| hypothetical protein Sked_00140 [Sanguibacter keddieii DSM 10542]
gi|269095555|gb|ACZ19991.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 286
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 121 LDVSKVVDKHQGWRLITCNWLHG-GVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISG 179
L S + + + WR +T ++H FHI NM +L ++G LE G +R LY++S
Sbjct: 107 LAFSPALGEIEPWRFVTAAFVHSTSFFHIALNMYALWIVGPYLENLLGRVRFTALYLLSA 166
Query: 180 FGGSLLSALFIQSN------ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIA 233
GG + L + +VGASGA+FGL G++ + + ++VII
Sbjct: 167 IGGQVAVVLLADPSGASWFTGTVGASGAVFGLFGAIFVVMRK-----MGQEARGMLVIIG 221
Query: 234 INLAVG-ILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+NL VG ++P++ H+GG ++G +LG V+ P+
Sbjct: 222 LNLVVGFVVPNISWQGHLGGLVTGTVLGAVYAYAPR 257
>gi|16803377|ref|NP_464862.1| hypothetical protein lmo1337 [Listeria monocytogenes EGD-e]
gi|284801722|ref|YP_003413587.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284994864|ref|YP_003416632.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404283828|ref|YP_006684725.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404410635|ref|YP_006696223.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|405758384|ref|YP_006687660.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|16410753|emb|CAC99415.1| lmo1337 [Listeria monocytogenes EGD-e]
gi|284057284|gb|ADB68225.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284060331|gb|ADB71270.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404230461|emb|CBY51865.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|404233330|emb|CBY54733.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404236266|emb|CBY57668.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|441471011|emb|CCQ20766.1| Rhomboid protease gluP [Listeria monocytogenes]
gi|441474138|emb|CCQ23892.1| Rhomboid protease gluP [Listeria monocytogenes N53-1]
Length = 512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ HI +N + L ++G E+ +G R L+ ++ G G++ S +
Sbjct: 228 WRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGICGNIAS-FALNM 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+SVGAS A+F ++G++L ++ +Y +++ ++AINL + + +D HIG
Sbjct: 287 NLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFSSQIDIAGHIG 346
Query: 252 GFISGFLL-GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
G + GFLL G + L + F W Y +S ++ + YQ
Sbjct: 347 GLVGGFLLAGALSLPKQFFHWRRLAYGISLFAVAVLFLYFGYQ 389
>gi|404413413|ref|YP_006699000.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
gi|404239112|emb|CBY60513.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
Length = 512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ HI +N + L ++G E+ +G R L+ ++ G G++ S +
Sbjct: 228 WRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGICGNIAS-FALNM 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+SVGAS A+F ++G++L ++ +Y +++ ++AINL + + +D HIG
Sbjct: 287 NLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFSSQIDIAGHIG 346
Query: 252 GFISGFLL-GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
G + GFLL G + L + F W Y +S ++ + YQ
Sbjct: 347 GLVGGFLLAGALSLPKQFFHWRRLAYGISLFAVAVLFLYFGYQ 389
>gi|297564157|ref|YP_003683130.1| rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848606|gb|ADH70624.1| Rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 12/139 (8%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
+RL+T +LHG +FH+L N ++ ++G +LE+ G +R L+++ F GS+LS L +
Sbjct: 139 YRLLTAAFLHGSIFHLLFNGYAMYLLGTQLERWLGHVRFLTLWVLGAFAGSVLSLLAEPN 198
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVI----IAINLAVGILPHVDNFA 248
SVGASGA+F L G++L + + L L +I + + ++P++ A
Sbjct: 199 QFSVGASGAIFALFGAVL--------VIGRRLRLDLRMIGVLLVVNLVLTFVVPNISWTA 250
Query: 249 HIGGFISGFLLGFVFLIRP 267
HIGG ++G LG VF P
Sbjct: 251 HIGGLVAGLALGAVFAYLP 269
>gi|221056004|ref|XP_002259140.1| rhomboid family protein [Plasmodium knowlesi strain H]
gi|193809211|emb|CAQ39913.1| rhomboid family protein, putative [Plasmodium knowlesi strain H]
Length = 276
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 103 KENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRL 162
K L PS L +GA +V+ + + + RL+ +LH +FH N+ L +G L
Sbjct: 72 KPADFLTPSDSFLITLGA-NVASKIKQGEIHRLVLPIFLHANIFHTFFNVFFQLRMGFTL 130
Query: 163 EQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTN 222
E+ +G +++ +LY ++G G++LS+ I VGAS + GLLG + SELI W + +
Sbjct: 131 EKNYGIVKIIILYFLTGIYGNMLSSCVTYCPIKVGASTSGMGLLGVVTSELILLWHVIRH 190
Query: 223 KH-------FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVF 263
+ F +L+ G ++DN H+GG +SG +G ++
Sbjct: 191 RERVVFNIIFFSLISFFYYFTFNG--SNIDNVGHLGGLLSGISMGILY 236
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 13/147 (8%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V + Q WRL+T +LH + HI NMLSL IG LE G +R +LYI+SG GGS LS
Sbjct: 125 VAEGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSALS 184
Query: 187 ALF-IQSNISVGASGALFGLLGS---MLSELITNWTIYTNKHFLTLVVIIAINLAVGIL- 241
L Q+ S+GASGA+FGLLG+ ++ L N ++ ++A+NL
Sbjct: 185 YLLAAQNQPSLGASGAIFGLLGATAVLMRRL--------NYDMRPVIALLALNLLFTFTW 236
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRPQ 268
+ AH+GG ++G ++ + + P+
Sbjct: 237 SGIAWQAHVGGLVAGTVVAYGMVHAPR 263
>gi|257413126|ref|ZP_04742087.2| integral membrane protein [Roseburia intestinalis L1-82]
gi|257204520|gb|EEV02805.1| integral membrane protein [Roseburia intestinalis L1-82]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
HQ WR+ T ++H G+ H++ NM+ +G RLE+ G ++ ++Y++SG GG LLS
Sbjct: 219 NHQWWRIFTAMFIHFGLPHLVNNMVIFFCVGSRLERAAGHFKMFVIYMLSGIGGGLLSYF 278
Query: 189 FI----QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-H 243
+ +S GASGA+FG +G ++ +I + + ++++ ++L G
Sbjct: 279 MMLYSGDYAVSAGASGAVFGTIGGLIWVVIRHRGRFEGLTVKGMILMAVLSLYYGFSTIG 338
Query: 244 VDNFAHIGGFISGFLLGFV 262
+DN+ H+GG ++GFL +
Sbjct: 339 IDNWCHVGGILTGFLAAMI 357
>gi|408411064|ref|ZP_11182247.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
gi|407874727|emb|CCK84053.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
Length = 224
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 99 FQPFKENPLLGPSSVT--LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLL 156
F F L+G S T L KMGA+ VV + Q WRL T +LH G+ HI +N + +
Sbjct: 19 FLVFLAETLIGGSESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIY 78
Query: 157 VIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGASGALFGLLGSM 209
IG E FG R +LY++SG GGSLL+ F IS GAS ALFG+LG+M
Sbjct: 79 YIGQYAEPIFGHWRFLVLYLLSGTGGSLLTLAFGSDQAISAGASTALFGILGAM 132
>gi|334182855|ref|NP_001185093.1| RHOMBOID-like protein 10 [Arabidopsis thaliana]
gi|332192482|gb|AEE30603.1| RHOMBOID-like protein 10 [Arabidopsis thaliana]
Length = 336
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 122 DVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFG 181
++ ++++ Q WRL T + LH H++ N SL IG E G R +Y+ S
Sbjct: 157 KINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAESLGGPKRFLAVYLTSAVA 216
Query: 182 GSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYT--NKHFLTLVVIIAINLAVG 239
S +S F ++ SVGASGA+FGL+GS+ +I + + N+ + + IIA+N+A+G
Sbjct: 217 SSAMSYWFNKAP-SVGASGAIFGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMG 275
Query: 240 ILP-HVDNFAHIGGFISGFLLGFVFLIRPQFGW 271
++ +DN+ HIGG + G +L+ PQ+ +
Sbjct: 276 LMSRRIDNWGHIGGLLGG--TAMTWLLGPQWKY 306
>gi|47095921|ref|ZP_00233524.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254912011|ref|ZP_05262023.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|254936338|ref|ZP_05268035.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|258611432|ref|ZP_05232285.2| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|386043648|ref|YP_005962453.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|386046989|ref|YP_005965321.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|386050313|ref|YP_005968304.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|386053590|ref|YP_005971148.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
gi|47015667|gb|EAL06597.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258599975|gb|EEW13300.1| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|258608928|gb|EEW21536.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|293589976|gb|EFF98310.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|345533980|gb|AEO03421.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|345536882|gb|AEO06322.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|346424159|gb|AEO25684.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|346646241|gb|AEO38866.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
Length = 518
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ HI +N + L ++G E+ +G R L+ ++ G G++ S +
Sbjct: 234 WRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGICGNIAS-FALNM 292
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+SVGAS A+F ++G++L ++ +Y +++ ++AINL + + +D HIG
Sbjct: 293 NLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFSSQIDIAGHIG 352
Query: 252 GFISGFLL-GFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQ 293
G + GFLL G + L + F W Y +S ++ + YQ
Sbjct: 353 GLVGGFLLAGALSLPKQFFHWRRLAYGISLFAVAVLFLYFGYQ 395
>gi|262196837|ref|YP_003268046.1| rhomboid family protein [Haliangium ochraceum DSM 14365]
gi|262080184|gb|ACY16153.1| Rhomboid family protein [Haliangium ochraceum DSM 14365]
Length = 747
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
L + GA + V ++ Q WRL T +LH G+ H+L N+ L ++G +EQ G +R
Sbjct: 382 ALVRAGANVKAWVTERGQLWRLPTSMFLHVGLLHLLLNVYGLWMLGKLVEQTLGSVRSFG 441
Query: 174 LYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLT-----L 228
LY++SG G+ SA F IS GASGA+ GLLG++++EL+ + Y +HF + L
Sbjct: 442 LYMLSGLVGAWASARFGAGGISAGASGAVLGLLGALIAELVVHHRAYP-RHFRSALLTPL 500
Query: 229 VVIIAINLAVGIL-PHVDNFAHIGGFISGFLLGFVF 263
V + A + +G P +D +AH+ G +G V
Sbjct: 501 VFVAAAQVGIGFFYPVIDQWAHVAGLATGAFAAMVL 536
>gi|339480868|ref|ZP_08656527.1| membrane-associated serine protease [Leuconostoc
pseudomesenteroides KCTC 3652]
Length = 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
+S L ++GA + D Q WRLIT +LH G HI+ NML+L IG E FG +
Sbjct: 41 NSYFLVQVGAKWGPYIKDDSQYWRLITPIFLHAGFMHIVTNMLTLWFIGPIAEDAFGSRK 100
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
LY SG G++ S LF + ISVGAS ALFGL G + +I + + + L
Sbjct: 101 FLGLYFFSGISGNIFSYLFSPNTISVGASTALFGLFGGL---MIFAYQFRHDPNVRALGS 157
Query: 231 IIAINLAVGIL-----PHVDNFAHIGGFISGFLLGFVF 263
++ + + + +L ++D + H GGFI G + +F
Sbjct: 158 MMGLFILLTLLSSFSATNIDLWGHFGGFIGGVMFAMIF 195
>gi|441142545|ref|ZP_20962413.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622490|gb|ELQ85269.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 303
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 43/250 (17%)
Query: 21 GSGSGNTVHPVEEMDRPQGVSAPPPAVYGEIKHSKKWVTWLIPCFVVANIAMFVITMYVN 80
GSG+G T +AP G + + VT ++ + N+A+F+ + V
Sbjct: 64 GSGTGRTAQ----------ATAPRTVAGGALTADTRLVTKIL---LGINVAVFIAVLAVG 110
Query: 81 NCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNW 140
+ + + G F+ +E+ LQ +G V + + +RL+T +
Sbjct: 111 DGLVQDLELIG---GAFT----RED---------LQFIG-------VAEGEWYRLLTAVF 147
Query: 141 LHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF-IQSNISVGAS 199
LH HI+ NMLSL +G LE FG +R LY++SG GGS LS L Q+ S+GAS
Sbjct: 148 LHQAPMHIIFNMLSLWWLGPPLEAAFGRVRFLALYLLSGLGGSALSYLLAAQNQPSLGAS 207
Query: 200 GALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIGGFISGFL 258
GA+FGLLG+ + + N +++++A+NL P + AH+GG + G
Sbjct: 208 GAIFGLLGATVILMRR-----LNYDMRPVLILLALNLVFTFAWPDIAWQAHVGGLVMGAA 262
Query: 259 LGFVFLIRPQ 268
+ + + P+
Sbjct: 263 VTYGMVHAPR 272
>gi|336176302|ref|YP_004581677.1| rhomboid family protein [Frankia symbiont of Datisca glomerata]
gi|334857282|gb|AEH07756.1| Rhomboid family protein [Frankia symbiont of Datisca glomerata]
Length = 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
Query: 126 VVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLL 185
+ + +RL+T +LH GV HIL NM +L ++G +LEQ G R L+++ GG+ L
Sbjct: 200 IAANDEYYRLLTAAFLHAGVLHILFNMYALYLLGSQLEQILGRARYLALFVVCAIGGNTL 259
Query: 186 SALFIQSN-ISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGI-L 241
S L N SVGAS A+FG + +++ + T +++I+ INL + +
Sbjct: 260 SYLINGWNTFSVGASTAVFGFFAAYYVIARRLRADTS-------AILIIVGINLIITFTI 312
Query: 242 PHVDNFAHIGGFISGFLLGFVFLIRP-QFGW 271
+D + HIGG ++G ++G ++ P + GW
Sbjct: 313 ARIDKWGHIGGLVAGLVVGVIYAYVPARRGW 343
>gi|358012853|ref|ZP_09144663.1| hypothetical protein AP8-3_15163 [Acinetobacter sp. P8-3-8]
Length = 270
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Query: 80 NNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCN 139
N K ++ ++ +G F+ Q + PS++ + GA D + + + +RL +
Sbjct: 15 NKIEKITLLLISINVGLFAVQVLSGVNITDPSTLDALRWGA-DYAPLTFLEEPYRLFSSM 73
Query: 140 WLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL--------FIQ 191
+ H G+ H++ NM +L V G EQ FG LYII+G GSLLS +Q
Sbjct: 74 FFHFGILHLMMNMWALFVFGNVAEQTFGRAYYLGLYIIAGLMGSLLSGYLDIRNSYALLQ 133
Query: 192 S-------NISVGASGALFGLLGSMLSELITNWTIYTNKHFL----TLVVIIAINLAVGI 240
S ++S GASGA+ GL G++ +++ + N+ F+ +L+ I+AINLA G
Sbjct: 134 SFDVKLLPHVSAGASGAVMGLGGAL--AMLSLFPPVPNQRFILDKKSLLSILAINLAFGF 191
Query: 241 LPH-VDNFAHIGGFISGFLLGFVFLI 265
++N AHIGG + G +L + I
Sbjct: 192 FATGINNAAHIGGMVMGAILALAWYI 217
>gi|289434618|ref|YP_003464490.1| rhomboid family membrane protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170862|emb|CBH27404.1| rhomboid family membrane protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 509
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR I+ +LH G+ H+ +N + L ++G E+ +G R L+ II G G++ S +
Sbjct: 228 WRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYTLILIIGGICGNIAS-FALNM 286
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+S+GAS A+F ++G++L ++ +Y +++ ++A+NL + + +D HIG
Sbjct: 287 NLSIGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFSSQIDIAGHIG 346
Query: 252 GFISGFLLGFVFLIRPQF-GWVEQRYALS 279
G + GFLL + QF W Y LS
Sbjct: 347 GLVGGFLLAGALSLPNQFLHWRRLAYGLS 375
>gi|406027090|ref|YP_006725922.1| membrane-associated serine protease [Lactobacillus buchneri CD034]
gi|405125579|gb|AFS00340.1| membrane-associated serine protease [Lactobacillus buchneri CD034]
Length = 220
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
ENP VTL + GA + ++ + WRLIT ++H G HIL N ++L IG +E
Sbjct: 32 ENP------VTLVEFGA-KYNPLIRAGEYWRLITPMFIHIGFTHILMNGITLYFIGQYVE 84
Query: 164 QEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGS--MLSELIT-NWTIY 220
Q FG R +++ +SG G+L S F S +S GAS A+FGL G+ ML E + N I
Sbjct: 85 QLFGHWRFAVIFFVSGIMGNLGSFAFTDS-LSAGASTAIFGLFGAFMMLGESFSKNPAIV 143
Query: 221 TNKHFLTLVVIIAINLAVGI-LPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALS 279
+ T ++ I +N+ I + +D H+GG + GFL+ +V +
Sbjct: 144 SMAK--TFLLFIVLNIGTDIFVSGIDIAGHLGGLVGGFLVAYVTGV-------------- 187
Query: 280 GYSALSRRKFMTYQCILWIVSLVLVIVGL 308
G+S S+ K + +L +++LVL +G+
Sbjct: 188 GFSKTSQTKRIISAIMLVVIALVLFTIGM 216
>gi|315302996|ref|ZP_07873713.1| rhomboid family protein, partial [Listeria ivanovii FSL F6-596]
gi|313628626|gb|EFR97042.1| rhomboid family protein [Listeria ivanovii FSL F6-596]
Length = 295
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR IT +LH G+ H+ +N + L ++G E+ +G R L+ I+ G G++ S +
Sbjct: 11 WRFITPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYVLILILGGICGNIAS-FTLNM 69
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHVDNFAHIG 251
N+SVGAS A+F ++G++L ++ IY +++ ++AINL + + +D HIG
Sbjct: 70 NLSVGASTAVFAVMGALLYLVVLKPNIYAKTIGVSIASLVAINLLLDVFSSQIDIAGHIG 129
Query: 252 GFISGFLL-GFVFLIRPQFGWVEQRYALS 279
G + GFLL G + L F W Y +S
Sbjct: 130 GLVGGFLLAGALSLPNQFFHWRRLAYGIS 158
>gi|255282943|ref|ZP_05347498.1| putative small hydrophobic molecule transporter protein [Bryantella
formatexigens DSM 14469]
gi|255266482|gb|EET59687.1| peptidase, S54 family [Marvinbryantia formatexigens DSM 14469]
Length = 205
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 107 LLGPSSVTLQKM---GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
++G ++ ++M GA+ V K + +RL TC +LH G H+ NML L G LE
Sbjct: 32 IMGGDTLDAEQMLSYGAMYPPYVTQKGEYYRLFTCMFLHFGWQHLFYNMLLLWFAGDMLE 91
Query: 164 QEFGFIRVGLLYIISGFGGSLLSAL--FIQSNISVGASGALFGLLGSMLSELITNWTIYT 221
+ G +R ++Y+ G G++LS L + +S GASGA+F ++G+++ ++ N
Sbjct: 92 ERSGPVRYLVIYLAGGVAGNVLSFLTGMERQVVSAGASGAVFAVIGALVWLVVKNRGKVE 151
Query: 222 NKHFLTLVVIIAINLAVGILPH-VDNFAHIGGFISGFLLGFVF 263
L ++ ++LA G + VD+ AH+GGFI GFLL V
Sbjct: 152 GIDNRGLCMMAVLSLAQGFMDAGVDHMAHLGGFIGGFLLAAVL 194
>gi|291540429|emb|CBL13540.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis XB6B4]
Length = 348
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
HQ WR+ T ++H G+ H++ NM+ +G RLE+ G ++ ++Y++SG GG LLS
Sbjct: 201 NHQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLSGIGGGLLSYF 260
Query: 189 FI----QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-H 243
+ +S GASGA+FG +G ++ +I + + ++++ ++L G
Sbjct: 261 MMLYSGDYAVSAGASGAVFGTIGGLIWVVIRHRGRFKGLTVKGMILMAVLSLYYGFSTIG 320
Query: 244 VDNFAHIGGFISGFLLGFV 262
+DN+ H+GG ++GFL+ +
Sbjct: 321 IDNWCHVGGILTGFLVAMI 339
>gi|392902169|ref|NP_001076719.2| Protein ROM-4, isoform c [Caenorhabditis elegans]
gi|358246510|emb|CCE72194.1| Protein ROM-4, isoform c [Caenorhabditis elegans]
Length = 1205
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +RL T ++H GV H+ ++L + LE R+ +LY SG GG+L SA
Sbjct: 926 NPNQFYRLFTSLFVHAGVIHLALSLLFQYYVMKDLENLIASKRMAILYFASGIGGNLASA 985
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF----LTLVVIIAINLAVGILPH 243
+F+ N +VG S A G+L +++ E N I K F + +++ + L +G +P
Sbjct: 986 IFVPYNPAVGPSSAQCGILAAVIVECCDNRRII--KEFKWALVQHLIVTLLVLCIGFIPW 1043
Query: 244 VDNFAHIGGFISGFLLGFVFLIRPQFG 270
VDN+AH+ G I G L + FG
Sbjct: 1044 VDNWAHLFGTIFGLLTTIIIFPYLDFG 1070
>gi|392902171|ref|NP_001041013.2| Protein ROM-4, isoform a [Caenorhabditis elegans]
gi|222350000|emb|CAB55122.3| Protein ROM-4, isoform a [Caenorhabditis elegans]
Length = 1203
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ +Q +RL T ++H GV H+ ++L + LE R+ +LY SG GG+L SA
Sbjct: 924 NPNQFYRLFTSLFVHAGVIHLALSLLFQYYVMKDLENLIASKRMAILYFASGIGGNLASA 983
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF----LTLVVIIAINLAVGILPH 243
+F+ N +VG S A G+L +++ E N I K F + +++ + L +G +P
Sbjct: 984 IFVPYNPAVGPSSAQCGILAAVIVECCDNRRII--KEFKWALVQHLIVTLLVLCIGFIPW 1041
Query: 244 VDNFAHIGGFISGFLLGFVFLIRPQFG 270
VDN+AH+ G I G L + FG
Sbjct: 1042 VDNWAHLFGTIFGLLTTIIIFPYLDFG 1068
>gi|357017627|gb|AET50842.1| hypothetical protein [Eimeria tenella]
Length = 295
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 12/168 (7%)
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
E PL+ PS L GA +V +V + Q WRL+T ++LH + H+ N+ L +G +E
Sbjct: 90 EMPLV-PSIGILVTFGA-NVPPLVARGQVWRLLTASFLHANLLHVAFNVFFQLRMGFGIE 147
Query: 164 QEFGFIRVGLLYIISGFGGSLLS--ALFIQSNISVGASGALFGLLGSMLSELITNWTIYT 221
+ +G+++ LLY + G+LLS ALF + VGAS A FG++G ++EL +W
Sbjct: 148 RRYGYLKFALLYAAAAIYGNLLSAAALFC-GTVKVGASTAGFGMMGVEMAELALSWRRLQ 206
Query: 222 NKHFLTLVVIIAINLAVGILP------HVDNFAHIGGFISGFLLGFVF 263
++ L L II+ L +G+ ++D H+GG I G LGF++
Sbjct: 207 HRDRL-LTNIISFFLLMGLFAFTLNGGYIDQMGHLGGLICGLSLGFLY 253
>gi|221484805|gb|EEE23099.1| peptidase S54 family protein [Toxoplasma gondii GT1]
Length = 263
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ TL +GA + Q WR++T +LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HF 225
+ + Y +S G+LLS L +SVGAS A FG++G M +E+ W + + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ + ++ + + VD F H+GGF++G L
Sbjct: 181 MDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|237843485|ref|XP_002371040.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
gi|50845220|gb|AAT84607.1| rhomboid protease 3 [Toxoplasma gondii]
gi|211968704|gb|EEB03900.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
Length = 263
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ TL +GA + Q WR++T +LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HF 225
+ + Y +S G+LLS L +SVGAS A FG++G M +E+ W + + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ + ++ + + VD F H+GGF++G L
Sbjct: 181 MDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|156085258|ref|XP_001610111.1| rhomboid 4 [Babesia bovis]
gi|154797363|gb|EDO06543.1| rhomboid 4 [Babesia bovis]
Length = 783
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 106 PLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQE 165
P GP+ +GAL + + + RL+T +LHGG +H+L N L +++ +E +
Sbjct: 459 PPDGPNYRIGTIVGALSANTIRIYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLYVIEPD 518
Query: 166 FGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHF 225
+GF R LYI G+ +L+ A GASG+LF L G+ + + +W +
Sbjct: 519 WGFKRTLALYIFGGYSANLVHASMSPCIPCWGASGSLFSLYGAFIPYTVEHWDNLRSPMA 578
Query: 226 LTLVVIIAINLAVGILP--HVDNFAHIGGFISGFLLGFVFL 264
L +V+ I I+L ILP V N AH+GGF G GF L
Sbjct: 579 L-IVIAITISLLEIILPGVGVSNHAHLGGFAFGLCFGFATL 618
>gi|323135989|ref|ZP_08071072.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
gi|322399080|gb|EFY01599.1| Rhomboid family protein [Methylocystis sp. ATCC 49242]
Length = 537
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 114 TLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGL 173
TL +GAL V+ + + WRL+T +LH G H NML L +IG +E E G IR
Sbjct: 372 TLVALGALWAPLVLQQGEDWRLLTSAFLHFGGMHFALNMLMLALIGRDVEHEIGAIRTLA 431
Query: 174 LYIISGFGGSLLSALF---------IQSNISVGASGALFGLLGSMLSELITNWTIYTN-- 222
LY+ GG+L S+ F + + VGASGA+F L G + + + +W +
Sbjct: 432 LYL----GGALFSSAFVLGLMAFGSVAYGLYVGASGAIFALFGVVGALRVRDWLRHRASL 487
Query: 223 KHFLTLVVIIAINLAVG---ILPHVDNFAHIGGFISGFLLGFVFLIRPQFG 270
F T + +AI + +G +LP AH+ GF G + G F ++P G
Sbjct: 488 DTFRTAALALAILVQIGADFLLPMSSLAAHLSGFGFGLVAG--FFVKPGRG 536
>gi|404417227|ref|ZP_10999031.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
gi|403490425|gb|EJY95966.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
Length = 480
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 20/247 (8%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGW-RLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
S + L +G L VV H W RLI+ +LH HIL NMLSL + G +E G
Sbjct: 182 SELKLLDVGGLVHFNVV--HGEWYRLISSIFLHYNFEHILMNMLSLFIFGKIVESIVGHW 239
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+ ++++ SG + S F ISVGASGA+FGL+GS+ +Y +K F +
Sbjct: 240 RMLVIFLFSGLFANFASLSFNIDTISVGASGAIFGLIGSLFG------FMYISKIFERKL 293
Query: 230 V---IIAINLAVGILPHVDN---FAHIGGFISGF---LLGFVFLIRPQFGWVEQRYALSG 280
V +IA+ + +GI +DN +AHIGGFI G LL + F W+ L
Sbjct: 294 VGQLLIALVILIGISLFMDNINVWAHIGGFIGGLFITLLAYYFTANRNVFWILLVLILIL 353
Query: 281 YSALSRRKFMTYQCILW--IVSLVLVIVGLTLGLVMLLRGVDANDHCSWCHYLSCVPTSR 338
+ A R + + ++ I++ + M+ +D N +YL + T+
Sbjct: 354 FIASQIRIYTIKEDNIYNTIIAKQMKEDKYKEAKQMVAETIDKNYADDETYYLKGLITTT 413
Query: 339 WSCRTEP 345
R E
Sbjct: 414 VDSRAEA 420
>gi|116748348|ref|YP_845035.1| rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697412|gb|ABK16600.1| Rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
Length = 284
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 30/210 (14%)
Query: 61 LIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPL--LGPSSVTLQKM 118
L+ + N MFV+++ + P ++ F NPL L P S +L +
Sbjct: 52 LVRTIIFINAGMFVLSLII--APSSA--------------GFSMNPLNFLSPGSRSLLLL 95
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
GA + + W L++ ++LHG + HIL NM++ I + E+G R +Y +S
Sbjct: 96 GATGRIPIDQFDRWWTLLSASYLHGSILHILFNMMAFSQIAPLIVHEYGASRTLAIYTLS 155
Query: 179 GFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV------II 232
G GG +LS F + +++GAS A+ GL+G+ L + F LV +I
Sbjct: 156 GIGGYVLS-YFAGTAVTLGASAAVCGLIGAAL-----YYGRSRGGQFGQLVYRQVSGWVI 209
Query: 233 AINLAVGILPHVDNFAHIGGFISGFLLGFV 262
+ + + P +DN+AH GG ++G L GFV
Sbjct: 210 GLFIFGFLFPGIDNWAHGGGLLTGILAGFV 239
>gi|340371137|ref|XP_003384102.1| PREDICTED: inactive rhomboid protein 2-like [Amphimedon
queenslandica]
Length = 785
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 9/162 (5%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
K D+ Q RL +LH G+FH+L ++ I LE+ G++ LYI SG GG++
Sbjct: 561 KTPDQIQ--RLGLAVFLHAGIFHVLLTIIFNFYILRDLEKYLGWLATATLYIGSGIGGNI 618
Query: 185 LSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGILP 242
+SALF+ + VG + ++FG++ L +I +W+ + L +I+ + +G LP
Sbjct: 619 ISALFVPYSAEVGPAASMFGVIAFFLIFIIYHWSFFDRAWLEMLKYSIIVILLFLIGFLP 678
Query: 243 HVDNFAHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSAL 284
++DN+A IGGF+ G + F+ Q ++ Q ++ +++L
Sbjct: 679 YIDNYARIGGFLFGMMFSFI-----QIHYIPQHDCMTEFNSL 715
>gi|199597186|ref|ZP_03210618.1| Membrane-associated serine protease [Lactobacillus rhamnosus HN001]
gi|258508700|ref|YP_003171451.1| membrane-associated serine protease [Lactobacillus rhamnosus GG]
gi|385828361|ref|YP_005866133.1| hypothetical protein [Lactobacillus rhamnosus GG]
gi|199591990|gb|EDZ00065.1| Membrane-associated serine protease [Lactobacillus rhamnosus HN001]
gi|257148627|emb|CAR87600.1| Membrane-associated serine protease [Lactobacillus rhamnosus GG]
gi|259650006|dbj|BAI42168.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
Length = 229
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRLIT ++H G+ HIL N SL +G E+ FG R LLY I+GF G++ S F
Sbjct: 58 QWWRLITPVFVHIGLTHILMNGFSLYFLGQMTERLFGHWRFFLLYFIAGFAGNVASFAFS 117
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPH-VD 245
+ ++ GAS A+FGLLG+ ML + + + FL LVV +NLA + VD
Sbjct: 118 PNTLAAGASTAIFGLLGACLMLGDTYRENPVIRQLARQFLLLVV---LNLAFNLFSSGVD 174
Query: 246 NFAHIGGFISGFL 258
+ HIGG + GFL
Sbjct: 175 IYGHIGGLLGGFL 187
>gi|229552508|ref|ZP_04441233.1| S54 family peptidase [Lactobacillus rhamnosus LMS2-1]
gi|258539881|ref|YP_003174380.1| membrane-associated serine protease [Lactobacillus rhamnosus Lc
705]
gi|385835529|ref|YP_005873303.1| rhomboid family protein [Lactobacillus rhamnosus ATCC 8530]
gi|229314060|gb|EEN80033.1| S54 family peptidase [Lactobacillus rhamnosus LMS2-1]
gi|257151557|emb|CAR90529.1| Membrane-associated serine protease [Lactobacillus rhamnosus Lc
705]
gi|355395020|gb|AER64450.1| rhomboid family protein [Lactobacillus rhamnosus ATCC 8530]
Length = 229
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRLIT ++H G+ HIL N SL +G E+ FG R LLY I+GF G++ S F
Sbjct: 58 QWWRLITPVFVHIGLTHILMNGFSLYFLGQMTERLFGHWRFFLLYFIAGFAGNVASFAFS 117
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPH-VD 245
+ ++ GAS A+FGLLG+ ML + + + FL LVV +NLA + VD
Sbjct: 118 PNTLAAGASTAIFGLLGACLMLGDTYRENPVIRQLARQFLLLVV---LNLAFNLFSSGVD 174
Query: 246 NFAHIGGFISGFL 258
+ HIGG + GFL
Sbjct: 175 IYGHIGGLLGGFL 187
>gi|74793159|sp|Q6IUY1.1|RHBL3_TOXGO RecName: Full=Rhomboid-like protease 3
gi|48093077|gb|AAT39987.1| rhomboid-like protease ROM3 [Toxoplasma gondii]
Length = 263
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ TL +GA + Q WR++T +LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HF 225
+ + Y +S G+LLS L +SVGAS A FG++G M +E+ W + + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ + ++ + + VD F H+GGF++G L
Sbjct: 181 MDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|300173053|ref|YP_003772219.1| membrane-associated serine protease [Leuconostoc gasicomitatum LMG
18811]
gi|299887432|emb|CBL91400.1| Membrane-associated serine protease [Leuconostoc gasicomitatum LMG
18811]
Length = 229
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 125 KVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSL 184
KV D++ WRL+T +LH GV HIL NML+L IG E+ FG + LY+ G G++
Sbjct: 55 KVYDQY--WRLVTPLFLHAGVMHILTNMLTLWFIGPIAEETFGSRKFLGLYLFGGIVGNI 112
Query: 185 LSALFIQSNISVGASGALFGLLGSML---SELITNWTIYTNKHFLTLVVIIAINLAVGIL 241
+S LF +SVGAS ALFG+ G ++ + + I + L V+ +NL G
Sbjct: 113 MSYLFAPLTVSVGASSALFGMFGGLILYAVQFKHDSRIRAQGTMMGLFVV--LNLMSGFF 170
Query: 242 PH-VDNFAHIGGFISGFLLGFVF 263
+D + HIGG I G + +F
Sbjct: 171 STGIDMWGHIGGLIGGMMFAVMF 193
>gi|418070876|ref|ZP_12708151.1| membrane-associated serine protease [Lactobacillus rhamnosus R0011]
gi|423078786|ref|ZP_17067463.1| peptidase, S54 family [Lactobacillus rhamnosus ATCC 21052]
gi|357540296|gb|EHJ24313.1| membrane-associated serine protease [Lactobacillus rhamnosus R0011]
gi|357549074|gb|EHJ30922.1| peptidase, S54 family [Lactobacillus rhamnosus ATCC 21052]
Length = 229
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WRLIT ++H G+ HIL N SL +G E+ FG R LLY I+GF G++ S F
Sbjct: 58 QWWRLITPVFVHIGLTHILMNGFSLYFLGQMTERLFGHWRFFLLYFIAGFAGNVASFAFS 117
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPH-VD 245
+ ++ GAS A+FGLLG+ ML + + + FL LVV +NLA + VD
Sbjct: 118 PNTLAAGASTAIFGLLGACLMLGDTYRENPVIRQLARQFLLLVV---LNLAFNLFSSGVD 174
Query: 246 NFAHIGGFISGFL 258
+ HIGG + GFL
Sbjct: 175 IYGHIGGLLGGFL 187
>gi|336066342|ref|YP_004561200.1| peptidase, S54 (rhomboid) family [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296288|dbj|BAK32159.1| peptidase, S54 (rhomboid) family [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 399
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 70 IAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPSSVTLQKMGALDVSKVVDK 129
+ +F++ Y+ P+ +++ VA LG F ++PF +V
Sbjct: 165 VVVFLLAQYLILIPELNINTVAVMLGAF-YKPF-----------------------IVHA 200
Query: 130 HQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALF 189
H+ +R IT +LH H++ N+++L +G+ +E + G Y+ + G L+ F
Sbjct: 201 HEWFRFITAGFLHISFLHLIMNLMALRNLGVVMET----VMEGKKYLFTLIAGILMGNAF 256
Query: 190 I----QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPHVD 245
+ + I +G SG LF LLG+M L I K + ++ INL + LP V
Sbjct: 257 VFILDEGVIGLGISGGLFALLGAMCVYLFETKAIRNPKVMSQVFQVLFINLIISSLPGVS 316
Query: 246 NFAHIGGFISGFLLGFVFLIRPQFGWVEQ 274
AH+GG I+G L G VF R + ++ +
Sbjct: 317 ATAHLGGLIAGLLCGLVFSKRKDWDYLRK 345
>gi|221504981|gb|EEE30646.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 263
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ TL +GA + Q WR++T +LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HF 225
+ + Y +S G+LLS L +SVGAS A FG++G M +E+ W + + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ + ++ + + VD F H+GGF++G L
Sbjct: 181 MDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,354,526,482
Number of Sequences: 23463169
Number of extensions: 272310031
Number of successful extensions: 1089873
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3678
Number of HSP's successfully gapped in prelim test: 2435
Number of HSP's that attempted gapping in prelim test: 1077704
Number of HSP's gapped (non-prelim): 7365
length of query: 389
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 245
effective length of database: 8,980,499,031
effective search space: 2200222262595
effective search space used: 2200222262595
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)