BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037392
(389 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1
Length = 857
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 21/213 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + I LE+ G++R+ ++YI+SG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + ELI +W I + F L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 773
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GFISGF L F FL FG ++ Y+ I+ ++V +GL
Sbjct: 774 HISGFISGFFLSFAFLPYISFGRLD-----------------MYRKRCQIIIFLVVFLGL 816
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
GLV+L C WC L+C+P + C
Sbjct: 817 FAGLVVLFYVHPIK--CEWCELLTCIPFTDKFC 847
>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2
Length = 856
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I +V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1
Length = 856
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + LV + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQLVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2
SV=1
Length = 856
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GF+SG L F FL FG KF Y +C + I V + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQAVFLGL 815
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 816 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
Length = 855
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1
Length = 855
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + I +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIIFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 845
>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH G+ H L ++ + + LE+ G+ R+ ++Y++SG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FG+L + EL +W I + F L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTY--QCILWIVSLVLVIV 306
HI GFISG L F FL FG KF Y +C + + +V + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFG-----------------KFDLYRKRCQIIVFQVVFLGL 814
Query: 307 GLTLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSC 341
L ++ + V C WC +L+C+P + C
Sbjct: 815 LAGLVVLFYVYPV----RCEWCEFLTCIPFTDKFC 845
>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1
Length = 827
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>sp|A0JPA1|RHDF2_XENTR Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2
SV=1
Length = 826
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 21/214 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H +++ + + LE+ G++R+ ++YI+SG G+L SALF+
Sbjct: 623 QFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALFL 682
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W I K FL L+ I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLPWIDNIA 742
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL FG ++ R++ M I+SL LV VGL
Sbjct: 743 HIFGFLSGLLLSFSFLPYITFGTADK----------FRKRAMI------IISL-LVFVGL 785
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVPTSRWSCR 342
LV+ L N +W YL+C+P + C
Sbjct: 786 FASLVIWLYVYPIN--WAWIEYLTCLPFTNKFCE 817
>sp|C8VCL5|Y0929_EMENI Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN10929 PE=3 SV=1
Length = 503
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 42/259 (16%)
Query: 119 GALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIIS 178
G+LD D Q +R I +LH G HI N+L + +G +E+ G+ R GL+Y+ S
Sbjct: 240 GSLDDKPAPD--QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSS 297
Query: 179 GFGGSLLSALFI-QSNISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAIN 235
G G +L + Q S G SGALFG+L + +L+ W N + +V+ IA++
Sbjct: 298 GIWGFVLGGNYAGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVS 357
Query: 236 LAVGILPHVDNFAHIGGFISGFLLGFVFL-----IRPQFGWVEQRYA------------- 277
+G+LP +DNF+H+GGF G LG + +R + G Y
Sbjct: 358 FVLGLLPGLDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADP 417
Query: 278 ----------LSGYSALSRRKFMTYQCILW-------IVSLVLVIVGLTLGLVMLLRGVD 320
+ G + + F + LW + +LV V++G L +V +
Sbjct: 418 DQNKTSTGSNIGGLGKFNPKGFFAGRKPLWWAWWLVRLGALVAVLIGFILLIVNFYKYPS 477
Query: 321 ANDHCSWCHYLSCVPTSRW 339
+N CSWC+ SC+P + W
Sbjct: 478 SN--CSWCYRFSCLPVNGW 494
>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2
Length = 856
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL +LH GV H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K FL L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL L GL
Sbjct: 773 HIFGFLSGLLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LAFAGL 815
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W +L+C P TSR+ + E
Sbjct: 816 FAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYE 850
>sp|Q80WQ6|RHDF2_MOUSE Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1
Length = 827
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +R+ +LH G+ H L +++ + I LE+ G+ R+ +++I+SG G+L SA+F+
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTN--KHFLTLVVIIAINLAVGILPHVDNFA 248
VG +G+ FGLL + EL +W + K F L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 743
Query: 249 HIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIVGL 308
HI GF+SG LL F FL Y G S R++ L +VSL LV GL
Sbjct: 744 HIFGFLSGMLLAFAFLP----------YITFGTSDKYRKR------ALILVSL-LVFAGL 786
Query: 309 TLGLVMLLRGVDANDHCSWCHYLSCVP-TSRWSCRTE 344
LV+ L N W YL+C P TSR+ + E
Sbjct: 787 FASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYE 821
>sp|Q695T8|RHBL4_TOXGO Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1
Length = 641
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P++ L+ +G L+ + + + + +RL T ++HGG HIL N+ + I +E ++GF+
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNW-TIYTNKHFLTL 228
R LL+ + G G+LLSA+ +I+VG+SG+++ LLG+++ + W +I L
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 439
Query: 229 VVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFL----------------IRPQFGW- 271
++++ I + G+ DN+AH+GG + G L GF + + P F W
Sbjct: 440 MIVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSWC 499
Query: 272 --------VEQRYALSGYSALSRRKFMTYQ 293
+ +R A+ RRK Q
Sbjct: 500 VPKATQQKLLERAKARKAEAIRRRKLQAIQ 529
>sp|Q6IUY1|RHBL3_TOXGO Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1
Length = 263
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ TL +GA + Q WR++T +LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK----HF 225
+ + Y +S G+LLS L +SVGAS A FG++G M +E+ W + + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 226 LTLVVIIAINLAVGILPHVDNFAHIGGFISGFLL 259
+ + ++ + + VD F H+GGF++G L
Sbjct: 181 MDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>sp|Q6GV23|RHBL5_TOXGO Rhomboid-like protease 5 OS=Toxoplasma gondii GN=ROM5 PE=1 SV=1
Length = 841
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 110 PSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFI 169
P+ +GALD +KV + + +R++ +LHGG H+L N+ LE +GF+
Sbjct: 442 PNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWILEPAWGFL 501
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWT-IYTNKHFL-- 226
R L+I+ G GSLLSA+ ++VG+SGA +GLLG+++ I W I + FL
Sbjct: 502 RTLSLWIVGGVSGSLLSAVANPCTVTVGSSGAFYGLLGALVPFSIEYWDHIASPAWFLFC 561
Query: 227 --TLVVIIAINLAVGILPHVDNFAH 249
LV++ VG+ VDN AH
Sbjct: 562 VSVLVMVAQFGNMVGVQ-GVDNNAH 585
>sp|Q695T9|RHBL2_TOXGO Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1
Length = 283
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Query: 105 NPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQ 164
N +L P+ TL GA ++ +++ + WRLI +LH +FHIL N+ + IG+ +E+
Sbjct: 84 NEILAPTPQTLVMFGA-NIPELIRVGEIWRLICPLFLHLNLFHILMNLWVQIRIGLTMEE 142
Query: 165 EFGFIRVGLLYIISGFGGSLLS-ALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNK 223
++G+ + +Y G +++S A+ + GAS A+F L+G L+EL W ++
Sbjct: 143 KYGWKMLLAVYFGVGVLANMISAAVLFCGQMKAGASTAVFALIGVQLAELALIWHAIQDR 202
Query: 224 HFLTLVVIIAINLAV--GILPHVDNFAHIGGFISGFLLG 260
+ + V I + H+D+ HIGG + GF G
Sbjct: 203 NSAIISVCICLFFVFVSSFGSHMDSVGHIGGLVMGFAAG 241
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 111 SSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR 170
++ TL GA + S ++ + + WRL+T LH G+ H+ N L+L +G +E+ +G R
Sbjct: 202 NTETLVAFGAKENS-LIAQGEWWRLLTPIVLHIGIAHLAFNTLALWSVGTAVERMYGSGR 260
Query: 171 VGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV 230
L+Y+ +G GS+ S +F S GASGA+FG LG++L ++N ++ ++V
Sbjct: 261 FLLIYLAAGITGSIASFVF-SPYPSAGASGAIFGCLGALLYVALSNRKMFLRTIGTNIIV 319
Query: 231 IIAINLAVGI-LPHVDNFAHIGGFISGFL 258
II INL G + ++DN HIGG I GF
Sbjct: 320 IIIINLGFGFAVSNIDNSGHIGGLIGGFF 348
>sp|Q19821|ROM1_CAEEL Rhomboid-related protein 1 OS=Caenorhabditis elegans GN=rom-1 PE=3
SV=2
Length = 356
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
+ WR + +LH G+ H+L N++ L++GI LE R+G +Y+++ GSLL
Sbjct: 165 EAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAID 224
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGILPH------- 243
+++ VGAS ++ L+ + ++ +I NW + LV+ + I L G H
Sbjct: 225 PNSLLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTND 284
Query: 244 ---VDNFAHIGGFISGFLLGFVFLIRPQFGWVEQR 275
V + AHI G ++G G+V L + VE R
Sbjct: 285 CDSVSHLAHIAGAVTGLFFGYVVL----YNVVEHR 315
>sp|Q76NQ1|RHDF1_DROME Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2
SV=1
Length = 1429
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q +RL+T +H G+ H+ ++ + LE+ G +R ++YI+SGF G+L SA+ +
Sbjct: 1092 QLYRLLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFAGNLTSAILV 1151
Query: 191 QSNISVGASGALFGLLGSMLSELI-TNWTIYTNKH--FLTLVVIIAINLAVGILPHVDNF 247
VG S +L G++ S+++ L+ +W H L+++ ++ + +G LP+ NF
Sbjct: 1152 PHRPEVGPSASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGIGTLPYQLNF 1211
Query: 248 -AHIGGFISGFLLGFVFLIRPQFGWVEQRYALSGYSALSRRKFMTYQCILWIVSLVLVIV 306
+ G I G LL + + +S R+K + ++W L V+V
Sbjct: 1212 LGLLAGVICGCLLTMSLV------------PFTTFSKYGRKKKIN---LIWTCVLFHVVV 1256
>sp|A2AGA4|RHBL2_MOUSE Rhomboid-related protein 2 OS=Mus musculus GN=Rhbdl2 PE=1 SV=1
Length = 302
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ + WR I+ +H GV HI+ N+L +V+GI LE +RVGL+Y+ GSL S+
Sbjct: 115 KREEAWRFISYMLVHAGVQHIVGNLLMQIVLGIPLEMVHKGLRVGLVYLAGVLAGSLASS 174
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNWT----IYTNKHFLTLVVIIAINLAVGILPH 243
+F VGASG ++ L+G +I N+ + L +++I+A ++ +
Sbjct: 175 IFDPLKSLVGASGGVYALMGGYFMNVIVNFREMIPAFGIVRLLVIILIVASDMGFALYRR 234
Query: 244 ---------VDNFAHIGGFISGFLLGF 261
V AHI G +G +G+
Sbjct: 235 FFVPANGSPVSFAAHIAGGFAGMSIGY 261
>sp|P46116|AARA_PROST Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1
Length = 281
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WR LH H+ N L+L VIGI E+ +G ++ +YIISG G +L SA +
Sbjct: 69 WRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYWQYY 128
Query: 193 NIS---------------VGASGALFGLLGSMLSELITNWTIYTNKH----------FLT 227
IS VGASGA+ G+ + + LI N H
Sbjct: 129 EISNSDLWTDSTVYITIGVGASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQLYN 188
Query: 228 LVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQ 268
L+ +IA+ L G+ VDN AHIGG I G L+ +++ P
Sbjct: 189 LIAMIALTLINGLQSGVDNAAHIGGAIIGALISIAYILVPH 229
>sp|Q695U0|RHBL1_TOXGO Rhomboid-like protease 1 OS=Toxoplasma gondii GN=ROM1 PE=2 SV=1
Length = 293
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 14/169 (8%)
Query: 104 ENPLLGPSSVTLQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLE 163
E PL+ P++ L GA + ++ + Q WRL+ +LH FH+ N+ L +G +E
Sbjct: 83 ELPLI-PAANILVHFGA-NYPPLIKQGQVWRLLLPVFLHANFFHVFFNVFFQLRMGFTIE 140
Query: 164 QEFGFIRVGLLYIISGFGGSLLSAL-FIQSNISVGASGALFGLLGSMLSELITNWTIYTN 222
+ +G ++ LY S G+LLSA F +++ VGAS A FGL+G + E+ W +
Sbjct: 141 RRYGLLKFTGLYFASAIYGNLLSATAFFCNSLKVGASTAGFGLIGIQICEMALTWHRMRH 200
Query: 223 KH--------FLTLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVF 263
+ F+ L+V++ L G +D H+GG + GF +G ++
Sbjct: 201 RDRMLTNMVSFVLLMVLLMFTLNGG---SIDQMGHLGGLLCGFSIGMLY 246
>sp|Q9NX52|RHBL2_HUMAN Rhomboid-related protein 2 OS=Homo sapiens GN=RHBDL2 PE=1 SV=2
Length = 303
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 128 DKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSA 187
+ + WR I+ +H GV HIL N+ LV+GI LE +RVGL+Y+ GSL S+
Sbjct: 116 KREEAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGLVYLAGVIAGSLASS 175
Query: 188 LFIQSNISVGASGALFGLLGSMLSELITNW 217
+F VGASG ++ L+G ++ N+
Sbjct: 176 IFDPLRYLVGASGGVYALMGGYFMNVLVNF 205
>sp|P58872|RHBL3_HUMAN Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1
Length = 404
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ Q WR +T ++H G+ H+ N++ L++G+ LE G R+GL+Y+ GSL ++
Sbjct: 208 RAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 267
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--TLVVIIAINLAVGIL----- 241
+ VG+SG ++ L+ + L+ ++ NW+ + L V +I +++ G
Sbjct: 268 ADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRF 327
Query: 242 --------PHVDNFAHIGGFISGFLLGFVFL 264
PH AH+GG G LG V L
Sbjct: 328 HPSAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|P58873|RHBL3_MOUSE Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1
Length = 404
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ Q WR +T ++H GV + N+ L++G+ LE G R+GL+Y+ GSL ++
Sbjct: 208 RAQAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSV 267
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFL--TLVVIIAINLAVGIL----- 241
+ VG+SG ++ L+ + L+ ++ NW+ + L V +I +++ G
Sbjct: 268 ADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRF 327
Query: 242 --------PHVDNFAHIGGFISGFLLGFVFL 264
PH AH+GG G LG V L
Sbjct: 328 HPSAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|P20350|RHOM_DROME Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2
Length = 355
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR + +LH FH+ N++ L GI LE G R+G++Y+ F GSL +++
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 191 QSNISVGASGALFGLLGSMLSELITNWTIY--TNKHFLTLVVIIAINLAVGIL------- 241
VGASG ++ LL + L+ + N+ + ++V+ ++ +L +
Sbjct: 209 SEVFLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGS 268
Query: 242 -----PHVDNFAHIGGFISGFLLGFVFLIRPQFGWVE 273
P V AH+ G ++G +G FL+ FG E
Sbjct: 269 AFAKGPQVSYIAHLTGALAGLTIG--FLVLKNFGHRE 303
>sp|O75783|RHBL1_HUMAN Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1
Length = 438
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ + WR +T ++H G+ + N L L+IG+ LE G +R+ LLY+ GSL ++
Sbjct: 242 RARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSI 301
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVV--IIAINLAVGIL----- 241
VG SG ++ L + L+ ++ NW + L +V ++ ++ VG
Sbjct: 302 TDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRF 361
Query: 242 --------PHVDNFAHIGGFISGFLLGFVFL------IRPQFGW 271
P AH+ G + G +G L +R Q GW
Sbjct: 362 SPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 405
>sp|P34356|ROM2_CAEEL Rhomboid-related protein 2 OS=Caenorhabditis elegans GN=rom-2 PE=3
SV=2
Length = 435
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQS 192
WRL T ++ G+FHI+ N+L L IG+ LE + R+ +LY + GS+LS +
Sbjct: 170 WRLFTYCLINVGIFHIIFNILIQLAIGVPLELVHRW-RIYILYFMGVLFGSILSLALDPT 228
Query: 193 NISVGASGALFGLLGSMLSELITNWTIYTNK--HFLTLVVIIAINLAVGIL-----PHVD 245
G + F L+ S ++ + TN+ N L+V A++ + + P +D
Sbjct: 229 VFLCGGAAGSFSLIASHITTIATNFKEMENATCRLPILIVFAALDYVLAVYQRFFAPRID 288
Query: 246 N---FAHIGGFISGFLLGFV 262
+ H+GG ++G L F+
Sbjct: 289 KVSMYGHLGGLVAGILFTFI 308
>sp|Q8VC82|RHBL1_MOUSE Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1
Length = 373
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 129 KHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL 188
+ + WR +T ++H G+ + N L L+IG+ LE G +R+ LLY+ GSL ++
Sbjct: 177 RARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSI 236
Query: 189 FIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI-------- 240
VG SG ++ L + L+ ++ NW + L +V+ + ++ +
Sbjct: 237 TDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRF 296
Query: 241 -------LPHVDNFAHIGGFISGFLLGFVFL------IRPQFGW 271
P AH+ G + G +G L +R Q GW
Sbjct: 297 SPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 340
>sp|P96617|YDCA_BACSU Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168)
GN=ydcA PE=3 SV=1
Length = 199
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 127 VDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLS 186
V + WRLIT LH G H+L N +S+ + LE+ G R L+Y SG G++ +
Sbjct: 53 VANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGT 112
Query: 187 ALFIQSN-ISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGIL-PHV 244
+ + + VGASGA+FGL G L ++ + +H ++ ++A + + + ++
Sbjct: 113 YVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQEHSKMIITLLAFAVLMSFINSNI 172
Query: 245 DNFAHIGGFISGFLLGFV 262
+ AH+ G GFLL F+
Sbjct: 173 NMMAHLFGLCGGFLLSFL 190
>sp|O88779|RHBL1_RAT Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus
GN=Rhbdl1 PE=2 SV=1
Length = 164
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 21/153 (13%)
Query: 140 WLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGAS 199
++H G+ + N L L+IG+ LE G +R+ LLY+ GSL ++ VG S
Sbjct: 1 FMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGS 60
Query: 200 GALFGLLGSMLSELITNWTIYTNKHFLTLVVIIAINLAVGI---------------LPHV 244
G ++ L + L+ ++ NW + L +V+ + ++ + P
Sbjct: 61 GGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQP 120
Query: 245 DNFAHIGGFISGFLLGFVFL------IRPQFGW 271
AH+ G + G +G L +R Q GW
Sbjct: 121 SFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 153
>sp|Q4WLP9|RBD2_ASPFU Rhomboid protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=rbd2 PE=3 SV=1
Length = 272
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI--ISGFGGS---LLSA 187
+RL T ++H G FH N+L+L + R E E G + L+I +S F L+
Sbjct: 66 YRLNTYPFIHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILVEK 125
Query: 188 LFIQSNIS-VGASGALFGLLGSMLSELITN---WTIYTNKHFLTLVVIIAINLAVGILPH 243
++SN + VGAS +F LLGS + + +++ T K + A L +P+
Sbjct: 126 FILRSNTAVVGASVWIFLLLGSEAIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFVPN 185
Query: 244 VDNFAHIGGFISGFLLGFVFL---IRPQ--FGWVEQRYALSG----YSALSRRKFMTYQC 294
H+ I G+LLG +L + P+ W+E + L G Y ++ ++ + Y
Sbjct: 186 TSFLGHLSAIIIGYLLGLGYLKVFVPPEKILRWIEGKLNLLGRLPHYVSVDQKTYGRYGV 245
Query: 295 I 295
+
Sbjct: 246 L 246
>sp|P44783|GLPG_HAEIN Rhomboid protease GlpG OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=glpG PE=1 SV=1
Length = 192
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 22/142 (15%)
Query: 133 WRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSAL--FI 190
WR I+ +H HIL N+ + G +E+ FG +++ +LY+++ SA+ ++
Sbjct: 51 WRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVA-------SAITGYV 103
Query: 191 QSNIS----VGASGALFGLLGSMLSELITNWTIYT-NKHFLTLVVIIAINLAVGILP--- 242
Q+ +S G SG ++ +LG + N ++ + F T+++ + +A+G +
Sbjct: 104 QNYVSGPAFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLL---VGIALGFISPLF 160
Query: 243 --HVDNFAHIGGFISGFLLGFV 262
+ N AHI G I G + GF+
Sbjct: 161 GVEMGNAAHISGLIVGLIWGFI 182
>sp|B1JHY8|GLPG_YERPY Rhomboid protease GlpG OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|A4TGR2|GLPG_YERPP Rhomboid protease GlpG OS=Yersinia pestis (strain Pestoides F)
GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q1CCK6|GLPG_YERPN Rhomboid protease GlpG OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q7CFX8|GLPG_YERPE Rhomboid protease GlpG OS=Yersinia pestis GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|B2K5W4|GLPG_YERPB Rhomboid protease GlpG OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q1C2L2|GLPG_YERPA Rhomboid protease GlpG OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|A7FNW6|GLPG_YERP3 Rhomboid protease GlpG OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=glpG PE=3 SV=1
Length = 278
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q664J1|GLPG_YERPS Rhomboid protease GlpG OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=glpG PE=3 SV=1
Length = 278
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ +G ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLGGQMEKRLGTSKLLVLTIVSAVFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
+N G SG ++ L+G + E I + + V+ I IL + N
Sbjct: 195 GANFG-GLSGVVYALMGYVWLTGERAPEHGISLPRGLMAFSVLWLIAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q8LB17|Y3846_ARATH Uncharacterized protein At3g58460 OS=Arabidopsis thaliana
GN=At3g58460 PE=1 SV=2
Length = 403
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 124 SKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYI 176
S ++ + Q +R T HG + H+L NM++L+ +G LE+ G +R LLY+
Sbjct: 56 SAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVR--LLYL 106
>sp|Q8BHC7|RHBL4_MOUSE Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1
Length = 315
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG---FIRV------ 171
+ V K + RL+ HG +H+ NM+S+L G++LE+ G F V
Sbjct: 54 ISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSL 113
Query: 172 --GLLYIISGFG-GSLLSALFIQSNISVGASGALFGL 205
G++Y++ F LL+ + N +VG SG LF L
Sbjct: 114 LTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFAL 150
>sp|Q4V8F3|RHBL4_RAT Rhomboid-related protein 4 OS=Rattus norvegicus GN=Rhbdd1 PE=2 SV=1
Length = 316
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 121 LDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFG-----------FI 169
+ V K ++ RL+ HG +H+ NM+S+L G++LE+ G +
Sbjct: 54 ISVEKCYQQNDWQRLLLSPVHHGDDWHLYFNMVSMLWKGVKLEKRLGSRWFAYIIATFSL 113
Query: 170 RVGLLYIISGFG-GSLLSALFIQSNISVGASGALFGL 205
G++Y++ F L++ + N +VG SG LF L
Sbjct: 114 LTGVVYLLLQFASAELMNQPDFKRNCAVGFSGVLFAL 150
>sp|Q4I4A4|RBD2_GIBZE Rhomboid protein 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620
/ FGSC 9075 / NRRL 31084) GN=RBD2 PE=3 SV=1
Length = 267
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIR---- 170
L++ GAL + + + +RL T +H V H + N+L+L + R E E G +
Sbjct: 45 LREWGAL-IPEEISITNAYRLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLAL 103
Query: 171 -VGLLYIISGFGGSLLSALFIQSNISV-GASGALFGLLGSMLSELITNWTIYTNKHFL-- 226
G L I L+ ++N V GAS +F LL + + T +N HF+
Sbjct: 104 FFGPLTSIPAVAYVLIERCIFRANHGVLGASMWVFTLLA-----MESIQTYKSNPHFVIG 158
Query: 227 -------TLVVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVF---LIRPQFG--WVEQ 274
T +I+++ +A ++P H+ G G++ GF + L P++G WVE
Sbjct: 159 SVNIPTWTTPLIMSLVVA-ALIPGTSLLGHLCGIAIGYVAGFGYAKLLAPPEWGLRWVEN 217
Query: 275 RYAL 278
R L
Sbjct: 218 RLNL 221
>sp|A1JSF0|GLPG_YERE8 Rhomboid protease GlpG OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=glpG PE=3 SV=1
Length = 278
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 131 QGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFI 190
Q WR ++ +LH + HIL N++ + ++E+ G ++ +L I+S +LF
Sbjct: 135 QIWRWVSHAFLHFSLLHILFNLMWWWYLAGQMEKRLGTGKLLVLTIVSALFSGWGQSLFS 194
Query: 191 QSNISVGASGALFGLLGS--MLSELITNWTIYTNKHFLTLVVIIAINLAVGILP-HVDNF 247
N G SG ++ L+G + E I + + V+ + IL + N
Sbjct: 195 GVNFG-GLSGVVYALMGYVWLTGERAPERGISLPRGLMAFSVLWLVAGYFDILGLSIANA 253
Query: 248 AHIGGFISGFLLGF 261
AH+ G I G L+ F
Sbjct: 254 AHVSGLIIGLLMAF 267
>sp|Q91X85|FLVC2_MOUSE Feline leukemia virus subgroup C receptor-related protein 2 OS=Mus
musculus GN=Flvcr2 PE=1 SV=2
Length = 551
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 28/241 (11%)
Query: 58 VTWLIPCFVVANIAMFVITMYVNNCPKNSVSCVARFLGRFSFQPFKENPLLGPS-----S 112
+ +L+P +V NI Y + + VA FL FKE P PS S
Sbjct: 251 IGFLVPPVLVPNIKDPEKLAYHISIMFYIIGGVATFLFILVIIVFKEKPKHPPSRAQSLS 310
Query: 113 VTLQKMGALDVSKVVD--KHQGWRLITCNW-LHGGVFHILANMLSLLVIGIRLEQEFGFI 169
L A +S +V K+ + L+ + L+ G F+ L+ +L+ +VI +E
Sbjct: 311 YALATTDASYLSSIVRLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVILHFPGEEVNAG 370
Query: 170 RVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYTNKHFLTLV 229
R+GL +I+G G+++S +++ + + + L + +++ ++ +T+ N + L +V
Sbjct: 371 RIGLTIVIAGMFGAMISGIWLDKSKTYKET-TLVVYIMTLVGMVVYTFTL--NLNHLWIV 427
Query: 230 VIIAINLAVGILPHVDNFAHIGGFISGFL-LGFVFLIRPQFGWVEQRYALSGYSALSRRK 288
I A L G F++G+L LGF F + +F + E SG +S +
Sbjct: 428 FITAGTL--------------GFFMTGYLPLGFEFAV--EFTYPESEGVSSGLLNVSAQV 471
Query: 289 F 289
F
Sbjct: 472 F 472
>sp|P60815|FLVC2_RAT Feline leukemia virus subgroup C receptor-related protein 2
OS=Rattus norvegicus GN=Flvcr2 PE=2 SV=1
Length = 546
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 102 FKENPLLGPS-----SVTLQKMGALDVSKVVD--KHQGWRLITCNW-LHGGVFHILANML 153
FKE P PS S L A +S +V K+ + L+ + L+ G F+ L+ +L
Sbjct: 289 FKEKPKYPPSRAQSLSYALATTDASYLSSIVRLFKNLNFVLLVITYGLNAGAFYALSTLL 348
Query: 154 SLLVIGIRLEQEFGFIRVGLLYIISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSEL 213
+ +VI QE R+GL +I+G G+++S +++ + + + L + +++ +
Sbjct: 349 NRMVIMHFPGQEVNAGRIGLTIVIAGMFGAMISGIWLDKSKTYKET-TLVVYIMTLVGMV 407
Query: 214 ITNWTIYTNKHFLTLVVIIAINLAVGILPHVDNFAHIGGFISGFL-LGFVFLIRPQFGWV 272
+ +T+ N + L +V I A +L G F++G+L LGF F + + +
Sbjct: 408 VYTFTL--NLNHLWIVFITADSL--------------GFFMTGYLPLGFEFAV--ELTYP 449
Query: 273 EQRYALSGYSALSRRKF 289
E SG +S + F
Sbjct: 450 ESEGVSSGLLNVSAQVF 466
>sp|P53259|PCP1_YEAST Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCP1 PE=1 SV=1
Length = 346
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 115 LQKMGALDVSKVVDKHQGWRLITCNWLHGGVFHILANMLSLLVIGIRLEQEFGFIRVGLL 174
LQK L V K +I + H +H+ NML+L G L G L
Sbjct: 169 LQKYMLLQKDYVTSKIS---IIGSAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSL 225
Query: 175 YIISGFGGSLLSALFIQ------SNISVGASGALFGLLG 207
Y+ S GSL S + + S+GASGALFG+LG
Sbjct: 226 YMNSAIAGSLFSLWYPKLARLAIVGPSLGASGALFGVLG 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,839,754
Number of Sequences: 539616
Number of extensions: 6214327
Number of successful extensions: 21968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 21839
Number of HSP's gapped (non-prelim): 171
length of query: 389
length of database: 191,569,459
effective HSP length: 119
effective length of query: 270
effective length of database: 127,355,155
effective search space: 34385891850
effective search space used: 34385891850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)