Your job contains 1 sequence.
>037393
LFGSYDQFQLRTSICNFNLHERKRMMEAQKILLLLLLCLNLVSSLVIAGAPPTCAANLDS
KCADSDEWKGEFFPGIPKIKYEGPSSKNHLAFKWYNPEEVILGKKMKDWMRFSVAFWHTF
RGTGSDPFGVPTKSWPWEDGTNSMAMAKRRMRANFEFIDKLGVDFWCFHDRDIAPDGETL
KEANANLDEVVALAKELQGTKVRPLWGTAQLFSHPRYMHGAATSSEVAVYAYAAAQVKKA
MEVTHYLGGENYVFWGGREGYQSLLNTDMGREIDHMANFFESAAAYKKKIGFKGNLLIEP
KPQEPTKHQYDWDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLG
NIDANTGDPQVGWDTDQFLTDIGEATSIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLF
IAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAM
EWGEPKVPSAKQELAEMIFQSAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037393
(503 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006696 - symbol:AT5G57655 species:3702 "Ara... 1997 1.8e-206 1
UNIPROTKB|P00944 - symbol:xylA "XylA" species:83333 "Esch... 1084 1.0e-109 1
TIGR_CMR|SPO_0856 - symbol:SPO_0856 "xylose isomerase" sp... 1056 9.2e-107 1
UNIPROTKB|Q48J73 - symbol:xylA "Xylose isomerase" species... 1008 1.1e-101 1
>TAIR|locus:505006696 [details] [associations]
symbol:AT5G57655 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] [GO:0009045 "xylose isomerase
activity" evidence=IEA;ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR001998 InterPro:IPR013452 PRINTS:PR00688
PROSITE:PS51415 Pfam:PF01261 GO:GO:0005783 GO:GO:0005794
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006098
GO:GO:0046872 Gene3D:3.20.20.150 InterPro:IPR013022
InterPro:IPR012307 SUPFAM:SSF51658 EMBL:AB011482 GO:GO:0042732
EMBL:AY136469 EMBL:BT006607 IPI:IPI00535514 RefSeq:NP_568861.3
UniGene:At.20353 UniGene:At.67777 ProteinModelPortal:Q9FKK7
SMR:Q9FKK7 STRING:Q9FKK7 PaxDb:Q9FKK7 PRIDE:Q9FKK7
EnsemblPlants:AT5G57655.2 GeneID:835871 KEGG:ath:AT5G57655
TAIR:At5g57655 eggNOG:COG2115 HOGENOM:HOG000252293
InParanoid:Q9FKK7 KO:K01805 OMA:HTFQHEL PhylomeDB:Q9FKK7
ProtClustDB:PLN02923 Genevestigator:Q9FKK7 GO:GO:0009045
TIGRFAMs:TIGR02630 Uniprot:Q9FKK7
Length = 477
Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
Identities = 359/458 (78%), Positives = 403/458 (87%)
Query: 47 IAGAPPTCAANLDSKCADSDEWKGEFFPGIPKIKYEGPSSKNHLAFKWYNPEEVILGKKM 106
++ PPTC A+L KC+DSD+W+G+FFP IPKIKYEGPSSKN LA++WYN EE ILGKKM
Sbjct: 20 VSADPPTCPADLGGKCSDSDDWQGDFFPEIPKIKYEGPSSKNPLAYRWYNAEEEILGKKM 79
Query: 107 KDWMRFSVAFWHTFRGTGSDPFGVPTKSWPWEDGTNSMAMAKRRMRANFEFIDKLGVDFW 166
KDW RFSVAFWHTFRGTG DPFG TK WPWEDGTNS++MAKRRMRANFEF+ KLGVD+W
Sbjct: 80 KDWFRFSVAFWHTFRGTGGDPFGAATKYWPWEDGTNSVSMAKRRMRANFEFLKKLGVDWW 139
Query: 167 CFHDRDIAPDGETLKEANANLDEVVALAKELQ-GTKVRPLWGTAQLFSHPRYMHGXXXXX 225
CFHDRDIAPDG TL+E+N NLDEV+ LAKELQ G+K++PLWGTAQLF HPRYMHG
Sbjct: 140 CFHDRDIAPDGTTLEESNKNLDEVIELAKELQKGSKIKPLWGTAQLFLHPRYMHGGATSS 199
Query: 226 XXXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQSLLNTDMGREIDHMANFFESAAA 285
MEVTHYLGGENYVFWGGREGYQ+LLNTDMGRE+DH+A FFE+A A
Sbjct: 200 EVGVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTLLNTDMGRELDHLARFFEAAVA 259
Query: 286 YKKKIGFKGNLLIEPKPQEPTKHQYDWDAATAANFLRKYGLINDFKLNIECNHATLSGHS 345
YKKKIGFKG LLIEPKPQEPTKHQYDWDAATAANFLRKYGLI++FKLNIECNHATLSGH+
Sbjct: 260 YKKKIGFKGTLLIEPKPQEPTKHQYDWDAATAANFLRKYGLIDEFKLNIECNHATLSGHT 319
Query: 346 CHHDIETARLNGLLGNIDANTGDPQVGWDTDQFLTDIGEATSIMLSVIKNGGLAPGGFNF 405
CHH++ETAR+NGLLGNIDANTGD Q GWDTDQFLTD+GEAT +M+SVIKNGG+APGGFNF
Sbjct: 320 CHHELETARINGLLGNIDANTGDAQTGWDTDQFLTDVGEATMVMMSVIKNGGIAPGGFNF 379
Query: 406 DAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKI 465
DAKLRRESTDVEDLFIAHI GMDT+ARGLR A K++E+GSL ELVRKRY ++DSE+G++I
Sbjct: 380 DAKLRRESTDVEDLFIAHISGMDTMARGLRNAVKILEEGSLSELVRKRYATWDSELGKQI 439
Query: 466 EAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 503
E GKADFE LEKKA E+GEPKV SAKQELAEMIFQSA+
Sbjct: 440 EEGKADFEYLEKKAKEFGEPKVSSAKQELAEMIFQSAM 477
>UNIPROTKB|P00944 [details] [associations]
symbol:xylA "XylA" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006098
"pentose-phosphate shunt" evidence=IEA] [GO:0009045 "xylose
isomerase activity" evidence=IEA;IDA] [GO:0042843 "D-xylose
catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00455 InterPro:IPR001998 InterPro:IPR013452
PRINTS:PR00688 PROSITE:PS51415 Pfam:PF01261 GO:GO:0005737
GO:GO:0006098 EMBL:U00039 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
Gene3D:3.20.20.150 InterPro:IPR013022 InterPro:IPR012307
SUPFAM:SSF51658 GO:GO:0042843 eggNOG:COG2115 HOGENOM:HOG000252293
KO:K01805 OMA:HTFQHEL GO:GO:0009045 TIGRFAMs:TIGR02630 EMBL:K01996
EMBL:X04691 EMBL:X00772 EMBL:S68257 PIR:A30252 RefSeq:NP_418022.1
RefSeq:YP_491869.1 ProteinModelPortal:P00944 SMR:P00944
DIP:DIP-11149N IntAct:P00944 MINT:MINT-1238504 PRIDE:P00944
EnsemblBacteria:EBESCT00000002082 EnsemblBacteria:EBESCT00000016016
GeneID:12933546 GeneID:948141 KEGG:ecj:Y75_p3610 KEGG:eco:b3565
PATRIC:32122606 EchoBASE:EB1067 EcoGene:EG11074
ProtClustDB:PRK05474 BioCyc:EcoCyc:XYLISOM-MONOMER
BioCyc:ECOL316407:JW3537-MONOMER BioCyc:MetaCyc:XYLISOM-MONOMER
Genevestigator:P00944 Uniprot:P00944
Length = 440
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 206/427 (48%), Positives = 279/427 (65%)
Query: 72 FFPGIPKIKYEGPSSKNHLAFKWYNPEEVILGKKMKDWMRFSVAFWHTFRGTGSDPFGVP 131
+F + +++YEG S N LAF+ YNP+E++LGK+M++ +RF+ +WHTF G+D FGV
Sbjct: 4 YFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVG 63
Query: 132 TKSWPWEDGTNSMAMAKRRMRANFEFIDKLGVDFWCFHDRDIAPDGETLKEANANLDEVV 191
+ PW+ ++A+AKR+ FEF KL V F+CFHD D++P+G +LKE N ++V
Sbjct: 64 AFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMV 123
Query: 192 -ALAKELQGTKVRPLWGTAQLFSHPRYMHGXXXXXXXXXXXXXXXXXXXXMEVTHYLGGE 250
LA + + + V+ LWGTA F++PRY G ME TH LGGE
Sbjct: 124 DVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKLGGE 183
Query: 251 NYVFWGGREGYQSLLNTDMGREIDHMANFFESAAAYKKKIGFKGNLLIEPKPQEPTKHQY 310
NYV WGGREGY++LLNTD+ +E + + F + +K KIGF+G LLIEPKPQEPTKHQY
Sbjct: 184 NYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTKHQY 243
Query: 311 DWDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQ 370
D+DAAT FL+++GL + KLNIE NHATL+GHS HH+I TA GL G++DAN GD Q
Sbjct: 244 DYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQ 303
Query: 371 VGWDTDQFLTDIGEATSIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTV 430
+GWDTDQF + E +M ++K GG GG NFDAK+RR+STD DLF HI MDT+
Sbjct: 304 LGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTM 363
Query: 431 ARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPS 489
A L+ AA++IEDG L + + +RY ++SE+GQ+I G+ L K A E P S
Sbjct: 364 ALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHHLSPVHQS 423
Query: 490 AKQELAE 496
+QE E
Sbjct: 424 GRQEQLE 430
>TIGR_CMR|SPO_0856 [details] [associations]
symbol:SPO_0856 "xylose isomerase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005997 "xylulose metabolic process"
evidence=ISS] [GO:0009045 "xylose isomerase activity" evidence=ISS]
HAMAP:MF_00455 InterPro:IPR001998 InterPro:IPR013452 PRINTS:PR00688
PROSITE:PS51415 Pfam:PF01261 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006098 GO:GO:0046872
Gene3D:3.20.20.150 InterPro:IPR013022 InterPro:IPR012307
SUPFAM:SSF51658 GO:GO:0042732 eggNOG:COG2115 HOGENOM:HOG000252293
KO:K01805 OMA:HTFQHEL GO:GO:0009045 TIGRFAMs:TIGR02630
ProtClustDB:PRK05474 RefSeq:YP_166109.1 ProteinModelPortal:Q5LV46
GeneID:3195629 KEGG:sil:SPO0856 PATRIC:23374995 Uniprot:Q5LV46
Length = 434
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 206/430 (47%), Positives = 272/430 (63%)
Query: 71 EFFPGIPKIKYEGPSSKNHLAFKWYNPEEVILGKKMKDWMRFSVAFWHTFRGTGSDPFGV 130
EFF I ++YEGP S N LAF+ Y+P+E+++GK+M+D +RF+VA+WH+F G DPFG
Sbjct: 3 EFFADIAPVRYEGPDSANPLAFRHYDPDEMVMGKRMEDHLRFAVAYWHSFAWEGGDPFGG 62
Query: 131 PTKSWPWEDGTNSMAMAKRRMRANFEFIDKLGVDFWCFHDRDIAPDGETLKEANANLDEV 190
T PW + M AK + A FE D LGV ++C+HD DI P+ T E+ N +E+
Sbjct: 63 QTLIRPWHP-QDDMTRAKVKADAAFEMFDILGVPYFCWHDADIRPEAATFAESLRNFEEI 121
Query: 191 VA--LAKELQGTKVRPLWGTAQLFSHPRYMHGXXXXXXXXXXXXXXXXXXXXMEVTHYLG 248
+ LAK ++ + R LWGTA +FSH R+M G ++ T +G
Sbjct: 122 IDHFLAK-MESRRTRLLWGTANMFSHRRWMAGASTNPDPDVFAYAAATVKTCLDATQRMG 180
Query: 249 GENYVFWGGREGYQSLLNTDMGREIDHMANFFESAAAYKKKIGFKGNLLIEPKPQEPTKH 308
G+NYV WGGREGY++LLNTDMGRE+DHM F YK KIGFKG +L+EPKPQEP+KH
Sbjct: 181 GQNYVLWGGREGYETLLNTDMGRELDHMGRFLSMVVDYKHKIGFKGAILVEPKPQEPSKH 240
Query: 309 QYDWDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGD 368
QYD+DAAT FLRKYGL + KLN+E HA L+GHS H+I A G+LG+ID N D
Sbjct: 241 QYDFDAATCIGFLRKYGLEGEVKLNLEQGHAILAGHSFEHEIAVAASEGMLGSIDMNRND 300
Query: 369 PQVGWDTDQFLTDIGEATSIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMD 428
Q GWDTDQF ++ E +++ GG GG NFDAKLRR+S D DL AH+ GMD
Sbjct: 301 YQSGWDTDQFPNNVPEVALCYYHILRAGGFTTGGTNFDAKLRRQSLDATDLIAAHVGGMD 360
Query: 429 TVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGE--PK 486
ARGL+ AA +IEDG L +R RY +DS+ GQ I ++D + L + + GE P+
Sbjct: 361 ICARGLKAAAAMIEDGGLETALRDRYAGWDSDHGQGIL--ESDLDSLFARVLA-GEIDPQ 417
Query: 487 VPSAKQELAE 496
S +QE+ E
Sbjct: 418 PHSGRQEMLE 427
>UNIPROTKB|Q48J73 [details] [associations]
symbol:xylA "Xylose isomerase" species:264730 "Pseudomonas
syringae pv. phaseolicola 1448A" [GO:0019321 "pentose metabolic
process" evidence=ISS] HAMAP:MF_00455 InterPro:IPR001998
InterPro:IPR013452 PRINTS:PR00688 PROSITE:PS51415 Pfam:PF01261
GO:GO:0005737 GO:GO:0006098 GO:GO:0046872 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.20.20.150 InterPro:IPR013022
InterPro:IPR012307 SUPFAM:SSF51658 GO:GO:0042732 eggNOG:COG2115
HOGENOM:HOG000252293 KO:K01805 OMA:HTFQHEL GO:GO:0009045
TIGRFAMs:TIGR02630 ProtClustDB:PRK05474 RefSeq:YP_274557.1
ProteinModelPortal:Q48J73 STRING:Q48J73 GeneID:3558817
KEGG:psp:PSPPH_2356 PATRIC:19973977 GO:GO:0019321 Uniprot:Q48J73
Length = 438
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 188/427 (44%), Positives = 264/427 (61%)
Query: 72 FFPGIPKIKYEGPSSKNHLAFKWYNPEEVILGKKMKDWMRFSVAFWHTFRGTGSDPFGVP 131
+FP + K++YEGP S + LAF+ Y+ +++ILGK M++ +R + +WHTF G+D FGV
Sbjct: 3 YFPAVDKVRYEGPDSDSPLAFRHYDADKLILGKPMREHLRMAACYWHTFVWPGADMFGVG 62
Query: 132 TKSWPWEDGTNSMAMAKRRMRANFEFIDKLGVDFWCFHDRDIAPDGETLKEANANLDEVV 191
T PW+ + + +A + FEF KLG+D++ FHD D+AP+G +LKE N +++
Sbjct: 63 TFKRPWQGSGDPLELAIGKAETAFEFFSKLGIDYYSFHDTDVAPEGSSLKEYRNNFAQMI 122
Query: 192 -ALAKELQGTKVRPLWGTAQLFSHPRYMHGXXXXXXXXXXXXXXXXXXXXMEVTHYLGGE 250
L + + T ++ LWGTA FS+PR+ G M T L G
Sbjct: 123 DQLERHQEQTGIKLLWGTANCFSNPRFAAGAASNPDPEVFAYAATQVFSAMNATQRLKGA 182
Query: 251 NYVFWGGREGYQSLLNTDMGREIDHMANFFESAAAYKKKIGFKGNLLIEPKPQEPTKHQY 310
NYV WGGREGY++LLNTD+ +E + + F +K KIGFKG+LLIEPKPQEPTKHQY
Sbjct: 183 NYVLWGGREGYETLLNTDLRQEREQLGRFMRMVVEHKHKIGFKGDLLIEPKPQEPTKHQY 242
Query: 311 DWDAATAANFLRKYGLINDFKLNIECNHATLSGHSCHHDIETARLNGLLGNIDANTGDPQ 370
D+D+AT FL++YGL + K+NIE NHATL+GHS HH+I TA G+ G+IDAN GDPQ
Sbjct: 243 DYDSATVFGFLQQYGLEKEIKVNIEANHATLAGHSFHHEIATAVSLGIFGSIDANRGDPQ 302
Query: 371 VGWDTDQFLTDIGEATSIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTV 430
GWDTDQF + E T ++K GG GG+NFD+K+RR+S D DLF H+ MD +
Sbjct: 303 NGWDTDQFPNSVEEMTLATYEILKAGGFTNGGYNFDSKVRRQSLDEVDLFHGHVAAMDVL 362
Query: 431 ARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPS 489
A L AA ++++ L + +RY + G+ + AG+ E L K A + P+ S
Sbjct: 363 ALALERAAAMVQNDKLQQFKDQRYAGWQQPFGKSLLAGEFSLESLAKHAFDKDLNPQAVS 422
Query: 490 AKQELAE 496
+QEL E
Sbjct: 423 GRQELLE 429
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 503 468 0.00098 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 624 (66 KB)
Total size of DFA: 318 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.15u 0.12s 35.27t Elapsed: 00:00:02
Total cpu time: 35.15u 0.12s 35.27t Elapsed: 00:00:02
Start: Sat May 11 12:04:49 2013 End: Sat May 11 12:04:51 2013