BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037404
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/590 (62%), Positives = 464/590 (78%), Gaps = 2/590 (0%)
Query: 2 SAPIRAPTWFSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLAL 61
S P+RAP+W S RR+ EE+LQ+L KC NLNQ KQL AQII+ +L D +IAPKLIS+L+L
Sbjct: 4 SLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSL 63
Query: 62 CRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFL 121
CRQ LA++VFN +Q+P+VHL N+LIRA QNS QAF VF +MQ G+F DNFTYPFL
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 122 LKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGER 181
LKAC+G++W +V+M+H I K G DI+VPN+LID YS+CG +GV A KLF M ER
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 182 DIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIP 241
D VSWNSM+ GLVK GEL +ARRLFDEMP+RD +SWNT+LDGYA+ EM+ AFELFEK+P
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 242 HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMP--AKTLVPWTIIISGYAEKGMAKEAARLY 299
RN VSWSTMV GYSK GDMEMA+++FD+MP AK +V WTIII+GYAEKG+ KEA RL
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 300 DQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKC 359
DQM +GLK D +ISILAAC ESGLL LGM++H+ + + N V NAL+DMYAKC
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 360 GSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVL 419
G+L A VFN + KKDLVSWN ML+GL +HG G++A+ LFSRM+ EG PDK TF+ VL
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Query: 420 CACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPN 479
C+C HAG ID+G+ YFYSME+ Y ++PQVEHYGC++DLLGR GRLKEA+++VQ+MP+EPN
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPN 483
Query: 480 AIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQ 539
+IWG LLGACR HN V++A+EVLD L++L DPGNY++LSNI+AA DW VA++R +
Sbjct: 484 VVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSK 543
Query: 540 MKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKP 589
MK +KPSGASSVE+++ +HEF+V D+ HPKS+QIYQM+ +L + P
Sbjct: 544 MKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIEPPDP 593
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/627 (37%), Positives = 351/627 (55%), Gaps = 48/627 (7%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQ---MGLAIKVFNDIQD 77
L LH CK L + + AQ+IK+ L Y KLI L + AI VF IQ+
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 78 PDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMI 137
P++ ++NT+ R +S A ++++ M G+ +++T+PF+LK+C F Q I
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 138 HALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG 197
H + K G D++V SLI Y + G + A K+F RD+VS+ ++I G G
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNG--RLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 198 ELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNI-VSWSTMV---- 252
+ A++LFDE+P +D VSWN ++ GYA+ G A ELF+ + N+ STMV
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 253 ----------------WG------------------YSKDGDMEMAKLLFDRMPAKTLVP 278
W YSK G++E A LF+R+P K ++
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 279 WTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASIN 338
W +I GY + KEA L+ +M +G P+D T++SIL ACA G + +G +H I+
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 339 KYRFKCNTNVCN---ALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEK 395
K R K TN + +L+DMYAKCG ++ A VFN + K L SWNAM++G AMHG+ +
Sbjct: 395 K-RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 396 ALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMI 455
+ LFSRM+ G PD TFVG+L AC+H+G +D G F +M +DY + P++EHYGCMI
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 456 DLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPG 515
DLLG SG KEA ++ M +EP+ +IW +LL AC+ H VEL E + LI+++ +PG
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 516 NYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQ 575
+Y +LSNI+A+ G WN+VA R + +K G SS+E+D+ VHEF + D+ HP++ +
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 576 IYQMINTLGKDLKPVGHAAKLSAEIGE 602
IY M+ + L+ G S + E
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQE 660
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/617 (35%), Positives = 343/617 (55%), Gaps = 45/617 (7%)
Query: 24 LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGL--AIKVFNDIQDPDVH 81
+ +C +L Q KQ +I+ DPY A KL + AL L A KVF++I P+
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 82 LYNTLIRACVQNSLNAQAFRVFLDM-QEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHAL 140
+NTLIRA + FLDM E + + +T+PFL+KA + L Q +H +
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 141 IYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELS 200
K D+FV NSLI Y CG + A K+F ++ E+D+VSWNSMI G V+ G
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCG--DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 201 EARRLFDEMPERDAVS---------------------------------------WNTIL 221
+A LF +M D + N +L
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 222 DGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTI 281
D Y K G + A LF+ + ++ V+W+TM+ GY+ D E A+ + + MP K +V W
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 282 IISGYAEKGMAKEAARLYDQME-EAGLKPDDGTLISILAACAESGLLGLGMKVHASINKY 340
+IS Y + G EA ++ +++ + +K + TL+S L+ACA+ G L LG +H+ I K+
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 341 RFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLF 400
+ N +V +AL+ MY+KCG L+ + VFN + K+D+ W+AM+ GLAMHG G +A+ +F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 401 SRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGR 460
+M++ P+ TF V CAC+H G +D+ F+ ME +YGI+P+ +HY C++D+LGR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 461 SGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTML 520
SG L++A++ +++MP+ P+ +WG LLGAC+ H + LAE L+ L+ + G + +L
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 521 SNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMI 580
SNI+A G W V+ +R M+ T +K G SS+E+D +HEF D HP SE++Y +
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Query: 581 NTLGKDLKPVGHAAKLS 597
+ + + LK G+ ++S
Sbjct: 635 HEVMEKLKSNGYEPEIS 651
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 335/570 (58%), Gaps = 14/570 (2%)
Query: 28 KNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLI 87
+NL + ++LF ++ +RD ++S A + A VF+ + + + +N L+
Sbjct: 140 RNLGKARELF----EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALL 195
Query: 88 RACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYF 147
A VQNS +A +F + + + N +K K Q ++ +
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK---KKIVEARQFFDSMNVR---- 248
Query: 148 GDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFD 207
D+ N++I Y++ G + A++LF +D+ +W +M++G ++ + EAR LFD
Sbjct: 249 -DVVSWNTIITGYAQSG--KIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 208 EMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLL 267
+MPER+ VSWN +L GY + M +A ELF+ +P RN+ +W+TM+ GY++ G + AK L
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 268 FDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLL 327
FD+MP + V W +I+GY++ G + EA RL+ QME G + + + S L+ CA+ L
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 328 GLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGL 387
LG ++H + K ++ V NAL+ MY KCGS++ A +F M KD+VSWN M+ G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 388 AMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQ 447
+ HG GE AL F MK EG PD T V VL AC+H G +DKG QYFY+M +DYG++P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 448 VEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLI 507
+HY CM+DLLGR+G L++A L+++MP EP+A IWGTLLGA R H ELAE D +
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 508 RLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCD 567
++ + G Y +LSN++A++G W V +R++M+ +K G S +E+ N+ H FSV D
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 568 QLHPKSEQIYQMINTLGKDLKPVGHAAKLS 597
+ HP+ ++I+ + L +K G+ +K S
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 35/356 (9%)
Query: 141 IYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELS 200
+ KCG DI N I SY + G +L ++F M VS+N MI+G ++ GE
Sbjct: 56 LLKCGD-SDIKEWNVAISSYMRTGRCNEAL--RVFKRMPRWSSVSYNGMISGYLRNGEFE 112
Query: 201 EARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGD 260
AR+LFDEMPERD VSWN ++ GY + + A ELFE +P R++ SW+TM+ GY+++G
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 261 MEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAA 320
++ A+ +FDRMP K V W ++S Y + +EA L+ E L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL------------- 219
Query: 321 CAESGLLGLGMKVHASINKYRFKCNTNV-----CNALVDMYAKCGSLDNAMSVFNGMTKK 375
+ + LLG +K + +F + NV N ++ YA+ G +D A +F+ +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 376 DLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYF 435
D+ +W AM+ G + E+A LF +M + ++ ++ +L ++ + F
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF 335
Query: 436 YSMERDYGILP--QVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGA 489
++P V + MI + G++ EA L MP + + + W ++
Sbjct: 336 -------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 195/402 (48%), Gaps = 23/402 (5%)
Query: 173 KLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNL 232
K + G+ DI WN I+ ++ G +EA R+F MP +VS+N ++ GY + GE L
Sbjct: 54 KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 233 AFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMA 292
A +LF+++P R++VSW+ M+ GY ++ ++ A+ LF+ MP + + W ++SGYA+ G
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 293 KEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNAL 352
+A ++D+M E +D + ++L+A ++ M+ + K R N L
Sbjct: 174 DDARSVFDRMPE----KNDVSWNALLSAYVQNS----KMEEACMLFKSRENWALVSWNCL 225
Query: 353 VDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDK 412
+ + K + A F+ M +D+VSWN ++ G A G+ ++A LF DE D
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDV 281
Query: 413 YTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQ 472
+T+ ++ +++ + F M + + M+ + R++ A L
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPERNEV-----SWNAMLAGYVQGERMEMAKELFD 336
Query: 473 SMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNK 532
MP N W T++ + + A+ + D ++ DP ++ + ++ +G +
Sbjct: 337 VMPCR-NVSTWNTMITGYAQCGKISEAKNLFD---KMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 533 VANVRLQMKKT--RAQKPSGASSVEVDNEVHEFSVCDQLHPK 572
+ +QM++ R + S +S++ +V + QLH +
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/597 (36%), Positives = 328/597 (54%), Gaps = 52/597 (8%)
Query: 17 LEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKV----- 71
+ + L CK + Q+ ++IK + ++ + +++ + A R+ LA
Sbjct: 12 ISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFH 71
Query: 72 --------FNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLK 123
F +++DP L+N +I++ QA + M E GV D F+ +LK
Sbjct: 72 EYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLK 129
Query: 124 ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDI 183
AC+ + IH + K G + D+F+ N LI Y KCG +G L++++F M +RD
Sbjct: 130 ACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG--LSRQMFDRMPKRDS 187
Query: 184 VSWNSMIAGLVKGGELSEARRLFD----------------------------------EM 209
VS+NSMI G VK G + AR LFD +M
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 210 PERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFD 269
PE+D +SWN+++DGY K G + A LF+ +P R++V+W+TM+ GY+K G + AK LFD
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 270 RMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME-EAGLKPDDGTLISILAACAESGLLG 328
+MP + +V + +++GY + EA ++ ME E+ L PDD TL+ +L A A+ G L
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 329 LGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLA 388
+ +H I + +F + AL+DMY+KCGS+ +AM VF G+ K + WNAM+ GLA
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLA 427
Query: 389 MHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQV 448
+HG GE A + +++ PD TFVGVL AC+H+G + +G+ F M R + I P++
Sbjct: 428 IHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRL 487
Query: 449 EHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIR 508
+HYGCM+D+L RSG ++ A L++ MPVEPN +IW T L AC H E E V LI
Sbjct: 488 QHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLIL 547
Query: 509 LKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSV 565
G +P +Y +LSN++A+ G W V VR MK+ + +K G S +E+D VHEF V
Sbjct: 548 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 316/523 (60%), Gaps = 8/523 (1%)
Query: 65 MGLAIKVFND-IQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFT-DNFTYPFLL 122
+G A K+F+ Q D L N++I+A ++ +F ++ D++++ F DNFT+ L
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 123 KACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERD 182
K+C+ + +H+ I++ G+ D++V ++D Y+K G +G A+ F M R
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGC--ARNAFDEMPHRS 143
Query: 183 IVSWNSMIAGLVKGGELSEARRLFDEMPE-RDAVSWNTILDGYAKAGEMNLAFELFEKIP 241
VSW ++I+G ++ GEL A +LFD+MP +D V +N ++DG+ K+G+M A LF+++
Sbjct: 144 EVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 242 HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQ 301
H+ +++W+TM+ GY D++ A+ LFD MP + LV W +I GY + +E RL+ +
Sbjct: 204 HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQE 263
Query: 302 ME-EAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCG 360
M+ L PDD T++S+L A +++G L LG H + + + VC A++DMY+KCG
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCG 323
Query: 361 SLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLC 420
++ A +F+ M +K + SWNAM++G A++G AL LF M E PD+ T + V+
Sbjct: 324 EIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVIT 382
Query: 421 ACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNA 480
AC H G +++G ++F+ M R+ G+ ++EHYGCM+DLLGR+G LKEA L+ +MP EPN
Sbjct: 383 ACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNG 441
Query: 481 IIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQM 540
II + L AC ++ +E AE +L + L+ + GNY +L N++AA W+ V+ M
Sbjct: 442 IILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVM 501
Query: 541 KKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTL 583
+K +A+K G S +E++ V EF D HP I+ ++ L
Sbjct: 502 RKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDL 544
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 85/383 (22%)
Query: 32 QTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACV 91
Q QL +QI + D Y++ ++ A +MG A F+++ + LI +
Sbjct: 96 QGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI 155
Query: 92 QNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIF 151
+ A ++F QM H D+
Sbjct: 156 RCGELDLASKLF------------------------------DQMPHV--------KDVV 177
Query: 152 VPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPE 211
+ N+++D + K G ++ A++LF M + +++W +MI G ++ AR+LFD MPE
Sbjct: 178 IYNAMMDGFVKSG--DMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 212 RDAVSWNTILDGYAKAGEMNLAFELFEKIP------------------------------ 241
R+ VSWNT++ GY + + LF+++
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 242 ----------HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGM 291
+ + + ++ YSK G++E AK +FD MP K + W +I GYA G
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGN 355
Query: 292 AKEAARLYDQM--EEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVC 349
A+ A L+ M EE KPD+ T+++++ AC GL+ G K + +
Sbjct: 356 ARAALDLFVTMMIEE---KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHY 412
Query: 350 NALVDMYAKCGSLDNAMSVFNGM 372
+VD+ + GSL A + M
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNM 435
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 63 RQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFT-DNFTYPFL 121
+ + A K+F+ + + ++ +NT+I QN + R+F +MQ D+ T +
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 122 LKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGER 181
L A + L + H + + + V +++D YSKCG + AK++F M E+
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCG--EIEKAKRIFDEMPEK 338
Query: 182 DIVSWNSMIAGLVKGGELSEARRLFDEM---PERDAVSWNTILDGYAKAGEMNLAFELFE 238
+ SWN+MI G G A LF M + D ++ ++ G + + F
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 239 KIP----HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEK-GMAK 293
+ + I + MV + G ++ A+ L MP + P II+S + G K
Sbjct: 399 VMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFE---PNGIILSSFLSACGQYK 455
Query: 294 EAARLYDQMEEA-GLKP-DDGTLI 315
+ R +++A L+P +DG +
Sbjct: 456 DIERAERILKKAVELEPQNDGNYV 479
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/613 (33%), Positives = 337/613 (54%), Gaps = 66/613 (10%)
Query: 27 CKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMG----LAIKVFNDIQDPDVHL 82
CK +Q KQL +Q I + +P KL + C ++G A K+F I +PDV +
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLF--VFWCSRLGGHVSYAYKLFVKIPEPDVVV 101
Query: 83 YNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLK---------ACNGKNWFHL 133
+N +I+ + + + R++L+M ++GV D+ T+PFLL AC K
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK----- 156
Query: 134 VQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGL 193
+H + K G +++V N+L+ YS CG++ +A+ +F + D+ SWN MI+G
Sbjct: 157 ---LHCHVVKFGLGSNLYVQNALVKMYSLCGLM--DMARGVFDRRCKEDVFSWNLMISGY 211
Query: 194 VKGGELSEARRLFDEMPERDAVS------------------------------------- 216
+ E E+ L EM ER+ VS
Sbjct: 212 NRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPS 270
Query: 217 ---WNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPA 273
N +++ YA GEM++A +F + R+++SW+++V GY + G++++A+ FD+MP
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 274 KTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKV 333
+ + WTI+I GY G E+ ++ +M+ AG+ PD+ T++S+L ACA G L +G +
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 334 HASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQG 393
I+K + K + V NAL+DMY KCG + A VF+ M ++D +W AM+ GLA +GQG
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 394 EKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGC 453
++A+ +F +M+D PD T++GVL AC H+G +D+ ++F M D+ I P + HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 454 MIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSD 513
M+D+LGR+G +KEA +++ MP+ PN+I+WG LLGA R HN +AE ++ L+ +
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 514 PGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKS 573
Y +L NI+A W + VR ++ +K G S +EV+ HEF D+ H +S
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQS 630
Query: 574 EQIYQMINTLGKD 586
E+IY + L ++
Sbjct: 631 EEIYMKLEELAQE 643
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 153/342 (44%), Gaps = 51/342 (14%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
L K K+ + K++ + + + + L+++ A C +M +A+++F ++ DV
Sbjct: 243 LSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
Query: 81 HLYNTLIRACVQNS---------------------------LNAQAF----RVFLDMQEK 109
+ ++++ V+ L A F +F +MQ
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 110 GVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVS 169
G+ D FT +L AC + + I I K D+ V N+LID Y KCG
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC--SE 420
Query: 170 LAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPER----DAVSWNTILDGYA 225
A+K+F M +RD +W +M+ GL G+ EA ++F +M + D +++ +L
Sbjct: 421 KAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACN 480
Query: 226 KAGEMNLAFELFEKI--PHR---NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAK-TLVPW 279
+G ++ A + F K+ HR ++V + MV + G ++ A + +MP + W
Sbjct: 481 HSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVW 540
Query: 280 TIIISG---YAEKGMAKEAARLYDQMEEAGLKPDDGTLISIL 318
++ + ++ MA+ AA+ ++E PD+G + ++L
Sbjct: 541 GALLGASRLHNDEPMAELAAKKILELE-----PDNGAVYALL 577
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 342/626 (54%), Gaps = 53/626 (8%)
Query: 11 FSKRRLLEEKLQNLH-KCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAI 69
FS ++ +L + + KC +L +Q+F ++ QR+ Y +++ L + A
Sbjct: 51 FSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP----QRNIYTWNSVVTGLTKLGFLDEAD 106
Query: 70 KVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKN 129
+F + + D +N+++ Q+ +A F M ++G + +++ +L AC+G N
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLN 166
Query: 130 WFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSM 189
+ +H+LI K + D+++ ++L+D YSKCG V+ A+++F MG+R++VSWNS+
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG--NVNDAQRVFDEMGDRNVVSWNSL 224
Query: 190 IAGLVKGGELSEARRLFDEMPE-------------------------------------- 211
I + G EA +F M E
Sbjct: 225 ITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK 284
Query: 212 --RDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFD 269
D + N +D YAK + A +F+ +P RN+++ ++M+ GY+ + A+L+F
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 270 RMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGL 329
+M + +V W +I+GY + G +EA L+ ++ + P + +IL ACA+ L L
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 330 GMKVHASINKYRFKCNTN------VCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAM 383
GM+ H + K+ FK + V N+L+DMY KCG ++ VF M ++D VSWNAM
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 384 LYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYG 443
+ G A +G G +AL LF M + G PD T +GVL AC HAGF+++G YF SM RD+G
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 444 ILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVL 503
+ P +HY CM+DLLGR+G L+EA +++ MP++P+++IWG+LL AC+ H + L + V
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 504 DCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEF 563
+ L+ ++ S+ G Y +LSN++A G W V NVR M+K K G S +++ H F
Sbjct: 585 EKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVF 644
Query: 564 SVCDQLHPKSEQIYQMINTLGKDLKP 589
V D+ HP+ +QI+ +++ L +++P
Sbjct: 645 MVKDKSHPRKKQIHSLLDILIAEMRP 670
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 236/498 (47%), Gaps = 90/498 (18%)
Query: 112 FTDNFTYPFLLKAC-NGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSL 170
FTD+ + LL +C K V+ +HA + K G+ +IF+ N LID+YSKCG +
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCG--SLED 73
Query: 171 AKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKA--- 227
+++F M +R+I +WNS++ GL K G L EA LF MPERD +WN+++ G+A+
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 228 --------------------------------GEMNLAFELFEKIPHRNIVS----WSTM 251
+MN ++ I +S S +
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 252 VWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDD 311
V YSK G++ A+ +FD M + +V W +I+ + + G A EA ++ M E+ ++PD+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 312 GTLISILAACAESGLLGLGMKVHASINKY-RFKCNTNVCNALVDMYAKCGSLDNAMSVFN 370
TL S+++ACA + +G +VH + K + + + + NA VDMYAKC + A +F+
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 371 G-------------------------------MTKKDLVSWNAMLYGLAMHGQGEKALGL 399
M ++++VSWNA++ G +G+ E+AL L
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 400 FSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQ-YFYSMERDYGILPQVEHY----GCM 454
F +K E P Y+F +L AC + G+Q + + ++ + E +
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 455 IDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRK----HNAVELAEEVLDCLIRLK 510
ID+ + G ++E + + M +E + + W ++ + + A+EL E+L+
Sbjct: 434 IDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLE-----S 487
Query: 511 GSDPGNYTMLSNIFAATG 528
G P + TM+ + +A G
Sbjct: 488 GEKPDHITMI-GVLSACG 504
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 320/543 (58%), Gaps = 43/543 (7%)
Query: 25 HKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLI--SSLALCRQMGLAIKVFNDIQDPDVHL 82
CKN+ KQ+ A ++ L + + +LI +SL++ + A K+F++I PDV +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 83 YNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIY 142
N ++R Q+ + ++ +M+++GV D +T+ F+LKAC+ W H +
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 143 KCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEA 202
+ G+ + +V N+LI ++ CG +G+ A +LF + V+W+SM +G K G++ EA
Sbjct: 140 RHGFVLNEYVKNALILFHANCGDLGI--ASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 203 RRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDME 262
RLFDEMP +D V+WN ++ G K EM+ A ELF++ +++V+W+ M
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM----------- 246
Query: 263 MAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACA 322
ISGY G KEA ++ +M +AG PD T++S+L+ACA
Sbjct: 247 --------------------ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 323 ESGLLGLGMKVH------ASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKD 376
G L G ++H AS++ + T + NAL+DMYAKCGS+D A+ VF G+ +D
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIY-VGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRD 345
Query: 377 LVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFY 436
L +WN ++ GLA+H E ++ +F M+ P++ TF+GV+ AC+H+G +D+G +YF
Sbjct: 346 LSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS 404
Query: 437 SMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAV 496
M Y I P ++HYGCM+D+LGR+G+L+EA V+SM +EPNAI+W TLLGAC+ + V
Sbjct: 405 LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNV 464
Query: 497 ELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEV 556
EL + + L+ ++ + G+Y +LSNI+A+TG W+ V VR TR +KP+G S +E
Sbjct: 465 ELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEE 524
Query: 557 DNE 559
D++
Sbjct: 525 DDD 527
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 317/571 (55%), Gaps = 10/571 (1%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+N KQ+ +I L D ++ L+ RQ + +F+ Q P++ LYN+LI
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 148
V N L + +FL +++ G++ FT+P +LKAC + L +H+L+ KCG+
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 149 DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 208
D+ SL+ YS G ++ A KLF + +R +V+W ++ +G G EA LF +
Sbjct: 145 DVAAMTSLLSIYSGSG--RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 209 MPER----DAVSWNTILDGYAKAGEMN----LAFELFEKIPHRNIVSWSTMVWGYSKDGD 260
M E D+ +L G+++ + + E +N +T+V Y+K G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 261 MEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAA 320
ME A+ +FD M K +V W+ +I GYA KE L+ QM + LKPD +++ L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 321 CAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSW 380
CA G L LG + I+++ F N + NAL+DMYAKCG++ VF M +KD+V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 381 NAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMER 440
NA + GLA +G + + +F + + G PD TF+G+LC C HAG I G+++F ++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 441 DYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAE 500
Y + VEHYGCM+DL GR+G L +A RL+ MP+ PNAI+WG LL CR +LAE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 501 EVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEV 560
VL LI L+ + GNY LSNI++ G W++ A VR M K +K G S +E++ +V
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 561 HEFSVCDQLHPKSEQIYQMINTLGKDLKPVG 591
HEF D+ HP S++IY + LG +++ +G
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 311/578 (53%), Gaps = 41/578 (7%)
Query: 22 QNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVH 81
Q L ++ + + ++II DL+ + + KL+ + A + + A KVF++I + +V
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVI 106
Query: 82 LYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALI 141
+ N +IR+ V N + +VF M V D++T+P +LKAC+ + + IH
Sbjct: 107 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 142 YKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSE 201
K G +FV N L+ Y KCG LSE
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGF---------------------------------LSE 193
Query: 202 ARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFE-----KIPHR--NIVSWSTMVWG 254
AR + DEM RD VSWN+++ GYA+ + A E+ KI H + S V
Sbjct: 194 ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN 253
Query: 255 YSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTL 314
+ + M + + F +M K+LV W ++I Y + M EA LY +ME G +PD ++
Sbjct: 254 TTTENVMYVKDMFF-KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 315 ISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTK 374
S+L AC ++ L LG K+H I + + N + NAL+DMYAKCG L+ A VF M
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 375 KDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQY 434
+D+VSW AM+ G+G A+ LFS+++D G PD FV L AC+HAG +++G
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 435 FYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHN 494
F M Y I P++EH CM+DLLGR+G++KEA R +Q M +EPN +WG LLGACR H+
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 495 AVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSV 554
++ D L +L G Y +LSNI+A G W +V N+R MK +K GAS+V
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Query: 555 EVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
EV+ +H F V D+ HP+S++IY+ ++ L K +K +G+
Sbjct: 553 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 335/584 (57%), Gaps = 19/584 (3%)
Query: 32 QTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACV 91
Q KQ+ A+++ L LQ ++ KLI + + + A +VF+D+ P + +N +IR
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 92 QNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIF 151
+N+ A ++ +MQ V D+FT+P LLKAC+G + + + +HA +++ G+ D+F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 152 VPNSLIDSYSKCGVVGVSLAKKLF--MSMGERDIVSWNSMIAGLVKGGELSEARRLFDEM 209
V N LI Y+KC +G A+ +F + + ER IVSW ++++ + GE EA +F +M
Sbjct: 156 VQNGLIALYAKCRRLGS--ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 210 PERDA----VSWNTILDGYAKAGEMNLAFELFEKIPHRNI-------VSWSTMVWGYSKD 258
+ D V+ ++L+ + ++ + + + +S +TM Y+K
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKC 270
Query: 259 GDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISIL 318
G + AK+LFD+M + L+ W +ISGYA+ G A+EA ++ +M ++PD ++ S +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 319 AACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLV 378
+ACA+ G L ++ + + ++ + + +AL+DM+AKCGS++ A VF+ +D+V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 379 SWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSM 438
W+AM+ G +HG+ +A+ L+ M+ G P+ TF+G+L AC H+G + +G +F M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 439 ERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVEL 498
D+ I PQ +HY C+IDLLGR+G L +A +++ MPV+P +WG LL AC+KH VEL
Sbjct: 451 A-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 499 AEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDN 558
E L + S+ G+Y LSN++AA W++VA VR++MK+ K G S VEV
Sbjct: 510 GEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Query: 559 EVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHAAKLSAEIGE 602
+ F V D+ HP+ E+I + + + LK G A A + +
Sbjct: 570 RLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHD 613
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 176/377 (46%), Gaps = 13/377 (3%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHL--YNTL 86
+L + + AQ+ +L D ++ LI+ A CR++G A VF + P+ + + +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 87 IRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGY 146
+ A QN +A +F M++ V D +L A + IHA + K G
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 147 FGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLF 206
+ + SL Y+KCG V+ AK LF M +++ WN+MI+G K G EA +F
Sbjct: 254 EIEPDLLISLNTMYAKCG--QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 207 DEMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHR----NIVSWSTMVWGYSKD 258
EM + D +S + + A+ G + A ++E + ++ S ++ ++K
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 259 GDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISIL 318
G +E A+L+FDR + +V W+ +I GY G A+EA LY ME G+ P+D T + +L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 319 AACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGM-TKKDL 377
AC SG++ G + ++ ++D+ + G LD A V M + +
Sbjct: 432 MACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 378 VSWNAMLYGLAMHGQGE 394
W A+L H E
Sbjct: 492 TVWGALLSACKKHRHVE 508
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 72/370 (19%)
Query: 4 PIRAPTWFSKRRLLEEK--------LQNLHKC-KNLNQTKQLFAQIIKLDLQRDPYIAPK 54
P+ A FS+ R ++ K + N C ++L Q + + A ++K+ L+ +P +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 55 LISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTD 114
L + A C Q+ A +F+ ++ P++ L+N +I +N +A +F +M K V D
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 115 NFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKL 174
+ + AC + ++ + + Y D+F+ ++LID ++KCG V A+ +
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG--SVEGARLV 380
Query: 175 FMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWN---------------- 218
F +RD+V W++MI G G EA L+ M ER V N
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGM 439
Query: 219 ------------------------TILDGYAKAGEMNLAFELFEKIP-HRNIVSWSTMVW 253
++D +AG ++ A+E+ + +P + W ++
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 254 GYSKDGDMEM----AKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYD-------QM 302
K +E+ A+ LF P+ T Y + AARL+D +M
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPSNT--------GHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 303 EEAGLKPDDG 312
+E GL D G
Sbjct: 552 KEKGLNKDVG 561
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 281/495 (56%), Gaps = 10/495 (2%)
Query: 84 NTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYK 143
N +I CV++ A RVF M+ K T N L+ + + I +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWN---SLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 144 CGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEAR 203
D F N ++ Y + V A+ F M +D SWN+MI G + GE+ +AR
Sbjct: 122 ----PDTFSYNIMLSCYVRN--VNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 204 RLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEM 263
LF M E++ VSWN ++ GY + G++ A F+ P R +V+W+ M+ GY K +E+
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 264 AKLLFDRMPA-KTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACA 322
A+ +F M K LV W +ISGY E ++ +L+ M E G++P+ L S L C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 323 ESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNA 382
E L LG ++H ++K + +L+ MY KCG L +A +F M KKD+V+WNA
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 383 MLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
M+ G A HG +KAL LF M D PD TFV VL AC HAG ++ G+ YF SM RDY
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 415
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEV 502
+ PQ +HY CM+DLLGR+G+L+EAL+L++SMP P+A ++GTLLGACR H VELAE
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 503 LDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHE 562
+ L++L + Y L+NI+A+ W VA VR +MK++ K G S +E+ N+VH
Sbjct: 476 AEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHH 535
Query: 563 FSVCDQLHPKSEQIY 577
F D++HP+ + I+
Sbjct: 536 FRSSDRIHPELDSIH 550
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 26 KCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQ-DPDVHLYN 84
+C +L + F K+ R +I+ +++ LA +F D+ + ++ +N
Sbjct: 198 ECGDLEKASHFF----KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 85 TLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKC 144
+I V+NS ++F M E+G+ ++ L C+ + L + IH ++ K
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 145 GYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARR 204
D+ SLI Y KCG +G A KLF M ++D+V+WN+MI+G + G +A
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGD--AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 205 LFDEMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS-----WSTMVWGY 255
LF EM + D +++ +L AG +N+ FE + V ++ MV
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 256 SKDGDMEMAKLLFDRMPAK 274
+ G +E A L MP +
Sbjct: 432 GRAGKLEEALKLIRSMPFR 450
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 330/613 (53%), Gaps = 42/613 (6%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDP-D 79
L+ L CK+LN KQL A I++ + +S + + A+ VF+ I P +
Sbjct: 16 LEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPE 75
Query: 80 VHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHA 139
++N +R ++S + ++ G D F++ +LKA + + +H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 140 LIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGEL 199
+ +K D FV +D Y+ CG ++ A+ +F M RD+V+WN+MI + G +
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCG--RINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 200 SEARRLFDEMPERDAVSWNTILDG------------------------------------ 223
EA +LF+EM + + + IL
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 224 ---YAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWT 280
YA AG M++A E F K+ RN+ + MV GYSK G ++ A+++FD+ K LV WT
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 281 IIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKY 340
+IS Y E +EA R++++M +G+KPD ++ S+++ACA G+L VH+ I+
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 341 RFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLF 400
+ ++ NAL++MYAKCG LD VF M ++++VSW++M+ L+MHG+ AL LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 401 SRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGR 460
+RMK E P++ TFVGVL C+H+G +++G + F SM +Y I P++EHYGCM+DL GR
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 461 SGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTML 520
+ L+EAL +++SMPV N +IWG+L+ ACR H +EL + ++ L+ G ++
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLM 553
Query: 521 SNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMI 580
SNI+A W V N+R M++ K G S ++ + + HEF + D+ H +S +IY +
Sbjct: 554 SNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Query: 581 NTLGKDLKPVGHA 593
+ + LK G+
Sbjct: 614 DEVVSKLKLAGYV 626
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 328/612 (53%), Gaps = 46/612 (7%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALC--RQMGLAIKVFNDIQDP 78
L L KCK L KQ+ AQ+I L DP+ + +LI+ AL R + ++K+ I++P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 79 DVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFT---DNFTYPFLLKACNGKNWFHLVQ 135
++ +N IR ++ ++F ++ M G D+FTYP L K C L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 136 MIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVK 195
MI + K V N+ I ++ CG + A+K+F RD+VSWN +I G K
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCG--DMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 196 GGELSEARRLFDEMPER----DAVSW---------------------------------- 217
GE +A ++ M D V+
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 218 -NTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTL 276
N ++D ++K G+++ A +F+ + R IVSW+TM+ GY++ G +++++ LFD M K +
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 277 VPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHAS 336
V W +I G + ++A L+ +M+ + KPD+ T+I L+AC++ G L +G+ +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 337 INKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKA 396
I KY N + +LVDMYAKCG++ A+SVF+G+ ++ +++ A++ GLA+HG A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 397 LGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMID 456
+ F+ M D G PD+ TF+G+L AC H G I G YF M+ + + PQ++HY M+D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 457 LLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGN 516
LLGR+G L+EA RL++SMP+E +A +WG LL CR H VEL E+ L+ L SD G
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 517 YTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQI 576
Y +L ++ W R M + +K G SS+EV+ V EF V D+ P+SE+I
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Query: 577 YQMINTLGKDLK 588
Y ++ LG+ ++
Sbjct: 655 YDRLHCLGRHMR 666
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 314/536 (58%), Gaps = 6/536 (1%)
Query: 21 LQNLHK-CKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIK-VFNDIQDP 78
L+ L K CK+ Q+ A+II+ L++D + ISS + VF + P
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 79 DVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFT-DNFTYPFLLKACNGKNWFHLVQMI 137
+L+N LI+ L + + + M G+ D +T+P ++K C+ + +
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 138 HALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG 197
H L+ + G+ D+ V S +D Y KC + A+K+F M ER+ VSW +++ VK G
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCK--DLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 198 ELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSK 257
EL EA+ +FD MPER+ SWN ++DG K+G++ A +LF+++P R+I+S+++M+ GY+K
Sbjct: 191 ELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAK 250
Query: 258 DGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISI 317
GDM A+ LF+ + W+ +I GYA+ G EA +++ +M +KPD+ ++ +
Sbjct: 251 GGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGL 310
Query: 318 LAACAESGLLGLGMKVHASINKYRFKCNTN-VCNALVDMYAKCGSLDNAMSVFNGMTKKD 376
++AC++ G L KV + +++ K +++ V AL+DM AKCG +D A +F M ++D
Sbjct: 311 MSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 377 LVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFY 436
LVS+ +M+ G+A+HG G +A+ LF +M DEG PD+ F +L C + +++G++YF
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 437 SMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAV 496
M + Y IL +HY C+++LL R+G+LKEA L++SMP E +A WG+LLG C H
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT 490
Query: 497 ELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGAS 552
E+AE V L L+ G+Y +LSNI+AA W VA++R +M + K G S
Sbjct: 491 EIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 304/552 (55%), Gaps = 37/552 (6%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLI--SSLALCRQMGLAIKVFNDIQDP 78
L L+ CKNL Q+ IK + D Y KLI ++++ + A ++ +P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 79 DVHLYNTLIRACVQNSLNAQAFRVFLDMQEKG-VFTDNFTYPFLLKACNGKNWFHLVQMI 137
D ++NTL+R ++ + VF++M KG VF D+F++ F++KA +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 138 HALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG 197
H K G +FV +LI Y CG V
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEF----------------------------- 159
Query: 198 ELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSK 257
AR++FDEM + + V+WN ++ + ++ A E+F+K+ RN SW+ M+ GY K
Sbjct: 160 ----ARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK 215
Query: 258 DGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISI 317
G++E AK +F MP + V W+ +I G A G E+ + +++ AG+ P++ +L +
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 318 LAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKD- 376
L+AC++SG G +H + K + +V NAL+DMY++CG++ A VF GM +K
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 377 LVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFY 436
+VSW +M+ GLAMHGQGE+A+ LF+ M G PD +F+ +L AC+HAG I++G YF
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 437 SMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAV 496
M+R Y I P++EHYGCM+DL GRSG+L++A + MP+ P AI+W TLLGAC H +
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Query: 497 ELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEV 556
ELAE+V L L ++ G+ +LSN +A G W VA++R M R +K + S VEV
Sbjct: 456 ELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Query: 557 DNEVHEFSVCDQ 568
+++F+ ++
Sbjct: 516 GKTMYKFTAGEK 527
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 303/558 (54%), Gaps = 51/558 (9%)
Query: 8 PTWFSKRRLLEEKLQNLHKC--------------KNLNQTKQLFAQIIKLDLQRDPYIAP 53
P ++ R L +E L+ + C K+L + +Q A ++K L D + A
Sbjct: 16 PQAYNLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSAS 75
Query: 54 KLISSLALC---RQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKG 110
KL++ A + + A + N I P+ +N++IRA +S A VF +M
Sbjct: 76 KLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP 135
Query: 111 VFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSL 170
VF D +++ F+LKAC F + IH L K G D+FV N+L++ Y + G +
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI-- 193
Query: 171 AKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEM 230
AR++ D MP RDAVSWN++L Y + G +
Sbjct: 194 -------------------------------ARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 231 NLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKG 290
+ A LF+++ RN+ SW+ M+ GY+ G ++ AK +FD MP + +V W +++ YA G
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 291 MAKEAARLYDQM-EEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVC 349
E ++++M +++ KPD TL+S+L+ACA G L G VH I+K+ + +
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA 342
Query: 350 NALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFG 409
ALVDMY+KCG +D A+ VF +K+D+ +WN+++ L++HG G+ AL +FS M EGF
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 410 PDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALR 469
P+ TF+GVL AC H G +D+ + F M Y + P +EHYGCM+DLLGR G+++EA
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 470 LVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGD 529
LV +P + +I+ +LLGAC++ +E AE + + L+ L D Y +SN++A+ G
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Query: 530 WNKVANVRLQMKKTRAQK 547
W KV + R M+ R +
Sbjct: 523 WEKVIDGRRNMRAERVNR 540
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 22/304 (7%)
Query: 282 IISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYR 341
+I YA + A ++ +M + PD + +L ACA G ++H K
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 342 FKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFS 401
+ V N LV++Y + G + A V + M +D VSWN++L G ++A LF
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 402 RMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSME-RDYGILPQVEHYGCMIDLLGR 460
M++ + + F ++ AG + + + F SM RD V + M+
Sbjct: 231 EMEERNV--ESWNF--MISGYAAAGLVKEAKEVFDSMPVRD------VVSWNAMVTAYAH 280
Query: 461 SGRLKEALRLVQSM----PVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGN 516
G E L + M +P+ ++L AC ++ E V I G +
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV-HVYIDKHGIEIEG 339
Query: 517 Y--TMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSE 574
+ T L ++++ G +K V + T + S +S+ D VH D L SE
Sbjct: 340 FLATALVDMYSKCGKIDKALEV---FRATSKRDVSTWNSIISDLSVHGLGK-DALEIFSE 395
Query: 575 QIYQ 578
+Y+
Sbjct: 396 MVYE 399
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 316/598 (52%), Gaps = 35/598 (5%)
Query: 24 LHKCKNLNQTK---QLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
L C L++ + QL A +K D D + + A C M A +F++ ++ +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 81 HLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHAL 140
YN +I Q +A +F + G+ D + + +AC I+ L
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 141 IYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELS 200
K D+ V N+ ID Y KC ++ A ++F M RD VSWN++IA + G+
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQ--ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 201 EARRLFDEM----PERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWST----MV 252
E LF M E D ++ +IL G + E+ I + S S+ ++
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 253 WGYSKDGDMEMAKLLFDR----------------MPAKTL----VPWTIIISGYAEKGMA 292
YSK G +E A+ + R M K L V W IISGY K +
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 293 KEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNAL 352
++A L+ +M E G+ PD T ++L CA GLG ++HA + K + + +C+ L
Sbjct: 585 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTL 644
Query: 353 VDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDK 412
VDMY+KCG L ++ +F ++D V+WNAM+ G A HG+GE+A+ LF RM E P+
Sbjct: 645 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Query: 413 YTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQ 472
TF+ +L AC H G IDKG++YFY M+RDYG+ PQ+ HY M+D+LG+SG++K AL L++
Sbjct: 705 VTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Query: 473 SMPVEPNAIIWGTLLGACRKH-NAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWN 531
MP E + +IW TLLG C H N VE+AEE L+RL D YT+LSN++A G W
Sbjct: 765 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 824
Query: 532 KVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKP 589
KV+++R M+ + +K G S VE+ +E+H F V D+ HP+ E+IY+ + + ++KP
Sbjct: 825 KVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP 882
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 228/458 (49%), Gaps = 18/458 (3%)
Query: 47 RDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDM 106
RD K+I+ + M A FN + DV +N+++ +QN + ++ VF+DM
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 107 QEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVV 166
+G+ D T+ +LK C+ L IH ++ + G D+ ++L+D Y+K
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 167 GVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDA-VS---WNTILD 222
SL ++F + E++ VSW+++IAG V+ LS A + F EM + +A VS + ++L
Sbjct: 232 VESL--RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 223 GYAKAGEMNL-----AFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLV 277
A E+ L A L IV +T+ Y+K +M+ A++LFD
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM-YAKCDNMQDAQILFDNSENLNRQ 348
Query: 278 PWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASI 337
+ +I+GY+++ +A L+ ++ +GL D+ +L + ACA L G++++
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 338 NKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKAL 397
K + V NA +DMY KC +L A VF+ M ++D VSWNA++ +G+G + L
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 398 GLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGC-MID 456
LF M PD++TF +L ACT G + G++ S+ + + GC +ID
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG--MASNSSVGCSLID 525
Query: 457 LLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHN 494
+ + G ++EA ++ N + GT+ + HN
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMHN 561
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 205/474 (43%), Gaps = 54/474 (11%)
Query: 99 AFRVFLDM--QEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSL 156
+F F D Q V T NF++ F K C + L + HA + G+ FV N L
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVF--KECAKQGALELGKQAHAHMIISGFRPTTFVLNCL 89
Query: 157 IDSYSKC-GVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAV 215
+ Y+ V S+ +F M RD+VSWN MI G K ++ +A F+ MP RD V
Sbjct: 90 LQVYTNSRDFVSASM---VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 216 SWNTILDGYAKAGEMNLAFELFEKIPHR-------------------------------- 243
SWN++L GY + GE + E+F +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 244 -------NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAA 296
++V+ S ++ Y+K + +F +P K V W+ II+G + + A
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 297 RLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMY 356
+ + +M++ S+L +CA L LG ++HA K F + V A +DMY
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 357 AKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFV 416
AKC ++ +A +F+ + S+NAM+ G + G KAL LF R+ G G D+ +
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 417 GVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPV 476
GV AC + +G+Q Y + + V ID+ G+ L EA R+ M
Sbjct: 387 GVFRACALVKGLSEGLQ-IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR- 444
Query: 477 EPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGS--DPGNYTMLSNIFAATG 528
+A+ W ++ A H E L + + S +P +T S + A TG
Sbjct: 445 RRDAVSWNAIIAA---HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG 495
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 146/578 (25%), Positives = 248/578 (42%), Gaps = 83/578 (14%)
Query: 24 LHKCKNLNQTK---QLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
L C L T Q+ ++++ D A L+ A ++ +++VF I + +
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246
Query: 81 HLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHAL 140
++ +I CVQN+L + A + F +MQ+ Y +L++C + L +HA
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 141 IYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELS 200
K + D V + +D Y+KC + A+ LF + + S+N+MI G +
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCD--NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 201 EARRLFDEMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWG-- 254
+A LF + D +S + + A ++ +++ + ++ +S V
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-GLAIKSSLSLDVCVANAA 423
Query: 255 ---YSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDD 311
Y K + A +FD M + V W II+ + + G E L+ M + ++PD+
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 312 GTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNA------ 365
T SIL AC G LG GM++H+SI K N++V +L+DMY+KCG ++ A
Sbjct: 484 FTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 366 ----------MSVFNGMTKKDL----VSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPD 411
M M K L VSWN+++ G M Q E A LF+RM + G PD
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 412 KYTFVGVLCACT-----------HAGFIDKGVQ-------------------------YF 435
K+T+ VL C HA I K +Q +
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 662
Query: 436 YSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVE---PNAIIWGTLLGACRK 492
S+ RD+ + MI G+ +EA++L + M +E PN + + ++L AC
Sbjct: 663 KSLRRDFVT------WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAH 716
Query: 493 HNAVELAEEVLDCLIRLKGSDPG--NYTMLSNIFAATG 528
++ E + R G DP +Y+ + +I +G
Sbjct: 717 MGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 754
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 322/587 (54%), Gaps = 21/587 (3%)
Query: 31 NQTKQLFAQIIKLDLQRDPY--IAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
N Q+ A +KL +P+ ++ L+ S R++ LA +F +I + D +NTLI
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 148
++ L ++ +FL M++ G +FT+ +LKA G + F L Q +HAL G+
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 149 DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 208
D V N ++D YSK V + + LF M E D VS+N +I+ + + + F E
Sbjct: 284 DASVGNQILDFYSKHDRVLET--RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 209 MP----ERDAVSWNTILDGYAKAGEMNLAFELF--------EKIPHRNIVSWSTMVWGYS 256
M +R + T+L A + + +L + I H +++V Y+
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG----NSLVDMYA 397
Query: 257 KDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLIS 316
K E A+L+F +P +T V WT +ISGY +KG+ +L+ +M + L+ D T +
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 317 ILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKD 376
+L A A L LG ++HA I + N + LVDMYAKCGS+ +A+ VF M ++
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 377 LVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFY 436
VSWNA++ A +G GE A+G F++M + G PD + +GVL AC+H GF+++G +YF
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 437 SMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAV 496
+M YGI P+ +HY CM+DLLGR+GR EA +L+ MP EP+ I+W ++L ACR H
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 497 ELAEEVLDCLIRL-KGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVE 555
LAE + L + K D Y +SNI+AA G+W KV +V+ M++ +K S VE
Sbjct: 638 SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Query: 556 VDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHAAKLSAEIGE 602
V++++H FS DQ HP ++I + IN L +++ G+ S+ + +
Sbjct: 698 VNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQD 744
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 200/434 (46%), Gaps = 16/434 (3%)
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFT--DNFTYPFLLKAC 125
A +F+ + D V + L+ +NS +AF++F M T D+ T+ LL C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 126 NGKNWFHLVQMIHALIYKCGYFGDIF--VPNSLIDSYSKCGVVGVSLAKKLFMSMGERDI 183
N + V +HA K G+ + F V N L+ SY C V + LA LF + E+D
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY--CEVRRLDLACVLFEEIPEKDS 215
Query: 184 VSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIP-- 241
V++N++I G K G +E+ LF +M + + G KA F L +++
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 242 ------HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEA 295
R+ + ++ YSK + ++LFD MP V + ++IS Y++ + +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 296 ARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDM 355
+ +M+ G + ++L+ A L +G ++H +V N+LVDM
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 356 YAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTF 415
YAKC + A +F + ++ VSW A++ G G L LF++M+ D+ TF
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 416 VGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMP 475
VL A + G Q + R G L V ++D+ + G +K+A+++ + MP
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 476 VEPNAIIWGTLLGA 489
+ NA+ W L+ A
Sbjct: 515 -DRNAVSWNALISA 527
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 49/399 (12%)
Query: 134 VQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGL 193
+ + A I K G+ D N +++ + G VS A+K++ M ++ VS N+MI+G
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRG--QVSAARKVYDEMPHKNTVSTNTMISGH 89
Query: 194 VKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR------NIVS 247
VK G++S AR LFD MP+R V+W ++ YA+ + AF+LF ++ + V+
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 248 WSTMVWG-------------------------------------YSKDGDMEMAKLLFDR 270
++T++ G Y + +++A +LF+
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 271 MPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLG 330
+P K V + +I+GY + G+ E+ L+ +M ++G +P D T +L A LG
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 331 MKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMH 390
++HA F + +V N ++D Y+K + +F+ M + D VS+N ++ +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 391 GQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEH 450
Q E +L F M+ GF + F +L + + G Q + + H
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ--LHCQALLATADSILH 387
Query: 451 YG-CMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLG 488
G ++D+ + +EA + +S+P + + W L+
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALIS 425
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 15/308 (4%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+L +QL Q + ++ L+ A C A +F + + LI
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 148
VQ L+ ++F M+ + D T+ +LKA L + +HA I + G
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 149 DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 208
++F + L+D Y+KCG + A ++F M +R+ VSWN++I+ G+ A F +
Sbjct: 486 NVFSGSGLVDMYAKCG--SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 209 MPER----DAVSWNTILDGYAKAGEMNLAFELFEKI-PHRNIV----SWSTMVWGYSKDG 259
M E D+VS +L + G + E F+ + P I ++ M+ ++G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 260 DMEMAKLLFDRMPAKT-LVPWTIIISG---YAEKGMAKEAARLYDQMEEAGLKPDDGTLI 315
A+ L D MP + + W+ +++ + + +A+ AA ME+ ++
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 316 SILAACAE 323
+I AA E
Sbjct: 664 NIYAAAGE 671
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 306/557 (54%), Gaps = 38/557 (6%)
Query: 24 LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLY 83
+H CK+ + + AQI++ + +A +L+S +L + ++ +F + ++ + +
Sbjct: 36 IHACKDTASLRHVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVL 94
Query: 84 NTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYK 143
N LIR +N+ + R F+ M GV D T+PF+LK+ + + L + +HA K
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 144 CGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEAR 203
D FV SL+D Y+K G +L A
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTG---------------------------------QLKHAF 181
Query: 204 RLFDEMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDG 259
++F+E P+R + WN +++GY +A +M++A LF +P RN SWST++ GY G
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSG 241
Query: 260 DMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILA 319
++ AK LF+ MP K +V WT +I+G+++ G + A Y +M E GLKP++ T+ ++L+
Sbjct: 242 ELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLS 301
Query: 320 ACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVS 379
AC++SG LG G+++H I K + + ALVDMYAKCG LD A +VF+ M KD++S
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS 361
Query: 380 WNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSME 439
W AM+ G A+HG+ +A+ F +M G PD+ F+ VL AC ++ +D G+ +F SM
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR 421
Query: 440 RDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELA 499
DY I P ++HY ++DLLGR+G+L EA LV++MP+ P+ W L AC+ H A
Sbjct: 422 LDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Query: 500 EEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNE 559
E V L+ L G+Y L A+ G+ V RL ++K ++ G S +E+D +
Sbjct: 482 ESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQ 541
Query: 560 VHEFSVCDQLHPKSEQI 576
+++FS D H +++I
Sbjct: 542 LNKFSAGDYSHKLTQEI 558
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 345 bits (884), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 299/556 (53%), Gaps = 22/556 (3%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQ---MGLAIKVFNDIQD 77
L L C++L + QL +IK + R+ +LI C + + A VF I
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 78 PDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMI 137
P V+++N++IR + +A + +M KG D FT+P++LKAC+G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 138 HALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG 197
H + K G+ +++V L+ Y CG V L ++F + + ++V+W S+I+G V
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGL--RVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 198 ELSEARRLFDEMPERDAVSWNTIL-DGYAKAGE--------------MNLAFE-LFEKIP 241
S+A F EM + TI+ D G L F+ F+
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKV 247
Query: 242 HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQ 301
N++ ++++ Y+K GD+ A+ LFD MP +TLV W II+GY++ G A+EA ++
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 307
Query: 302 MEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGS 361
M + G+ PD T +S++ A G LG +HA ++K F + + ALV+MYAK G
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 362 LDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFG-PDKYTFVGVLC 420
++A F + KKD ++W ++ GLA HG G +AL +F RM+++G PD T++GVL
Sbjct: 368 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 421 ACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNA 480
AC+H G +++G +YF M +G+ P VEHYGCM+D+L R+GR +EA RLV++MPV+PN
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 487
Query: 481 IIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQM 540
IWG LL C H +EL + + + + G Y +LSNI+A G W V +R M
Sbjct: 488 NIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESM 547
Query: 541 KKTRAQKPSGASSVEV 556
K R K G SSVE
Sbjct: 548 KSKRVDKVLGHSSVET 563
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 316/570 (55%), Gaps = 36/570 (6%)
Query: 24 LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLY 83
+ +C + A +IK L +D + + I++ +++ LA+ +Q+P+V +Y
Sbjct: 35 IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVY 94
Query: 84 NTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYK 143
N L + V S ++ +++ M V ++TY L+KA + + F + + A I+K
Sbjct: 95 NALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG--ESLQAHIWK 152
Query: 144 CGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEAR 203
G+ + + +LID YS G + EAR
Sbjct: 153 FGFGFHVKIQTTLIDFYSATG---------------------------------RIREAR 179
Query: 204 RLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEM 263
++FDEMPERD ++W T++ Y + +M+ A L ++ +N + + ++ GY G++E
Sbjct: 180 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ 239
Query: 264 AKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAE 323
A+ LF++MP K ++ WT +I GY++ +EA ++ +M E G+ PD+ T+ ++++ACA
Sbjct: 240 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 299
Query: 324 SGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAM 383
G+L +G +VH + F + + +ALVDMY+KCGSL+ A+ VF + KK+L WN++
Sbjct: 300 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 359
Query: 384 LYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYG 443
+ GLA HG ++AL +F++M+ E P+ TFV V ACTHAG +D+G + + SM DY
Sbjct: 360 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 419
Query: 444 ILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVL 503
I+ VEHYG M+ L ++G + EAL L+ +M EPNA+IWG LL CR H + +AE
Sbjct: 420 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 479
Query: 504 DCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKP-SGASSVEVDNEVHE 562
+ L+ L+ + G Y +L +++A W VA +R +M++ +K G SS+ +D H
Sbjct: 480 NKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHL 539
Query: 563 FSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
F+ D+ H S+++ +++ + + G+
Sbjct: 540 FAAADKSHSASDEVCLLLDEIYDQMGLAGY 569
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 320/566 (56%), Gaps = 47/566 (8%)
Query: 26 KCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNT 85
K ++ + ++LF ++ D +++ ++S +Q+ +A +F ++ + +V +NT
Sbjct: 89 KLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT 145
Query: 86 LIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCG 145
+I Q+ +A +F +M E+ + + N M+ AL+ +
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWN-------------------SMVKALVQR-- 184
Query: 146 YFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRL 205
ID A LF M RD+VSW +M+ GL K G++ EARRL
Sbjct: 185 ---------GRIDE-----------AMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRL 224
Query: 206 FDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAK 265
FD MPER+ +SWN ++ GYA+ ++ A +LF+ +P R+ SW+TM+ G+ ++ +M A
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 266 LLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQM-EEAGLKPDDGTLISILAACAES 324
LFDRMP K ++ WT +I+GY E +EA ++ +M + +KP+ GT +SIL+AC++
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 325 GLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVF-NGMT-KKDLVSWNA 382
L G ++H I+K + N V +AL++MY+K G L A +F NG+ ++DL+SWN+
Sbjct: 345 AGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNS 404
Query: 383 MLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
M+ A HG G++A+ ++++M+ GF P T++ +L AC+HAG ++KG+++F + RD
Sbjct: 405 MIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDE 464
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEV 502
+ + EHY C++DL GR+GRLK+ + + +G +L AC HN V +A+EV
Sbjct: 465 SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 503 LDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHE 562
+ ++ D G Y ++SNI+AA G + A +R++MK+ +K G S V+V + H
Sbjct: 525 VKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHL 584
Query: 563 FSVCDQLHPKSEQIYQMINTLGKDLK 588
F V D+ HP+ E + +++ L ++
Sbjct: 585 FVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 205/399 (51%), Gaps = 44/399 (11%)
Query: 163 CGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFD--------------- 207
C V ++ A+KLF + ERD+V+W +I G +K G++ EAR LFD
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMV 116
Query: 208 -----------------EMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWST 250
EMPER+ VSWNT++DGYA++G ++ A ELF+++P RNIVSW++
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 251 MVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPD 310
MV + G ++ A LF+RMP + +V WT ++ G A+ G EA RL+D M E +
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII-- 234
Query: 311 DGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFN 370
+ +++ A++ + ++ + + F N ++ + + ++ A +F+
Sbjct: 235 --SWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACGLFD 288
Query: 371 GMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRM-KDEGFGPDKYTFVGVLCACTHAGFID 429
M +K+++SW M+ G + + E+AL +FS+M +D P+ T+V +L AC+ +
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 430 KGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQS-MPVEPNAIIWGTLLG 488
+G Q + + ++ ++++ +SG L A ++ + + + + I W +++
Sbjct: 349 EGQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 489 ACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAAT 527
H + A E+ + + R G P T L+ +FA +
Sbjct: 408 VYAHHGHGKEAIEMYNQM-RKHGFKPSAVTYLNLLFACS 445
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 171/363 (47%), Gaps = 53/363 (14%)
Query: 169 SLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAG 228
+L + ++ S + +I L K G+++EAR+LFD +PERD V+W ++ GY K G
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLG 91
Query: 229 EMNLAFELFEKIPHR-NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYA 287
+M A ELF+++ R N+V+W+ MV GY + + +A++LF MP + +V W +I GYA
Sbjct: 92 DMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYA 151
Query: 288 EKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTN 347
+ G +A L+D+M E N
Sbjct: 152 QSGRIDKALELFDEMPER---------------------------------------NIV 172
Query: 348 VCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEG 407
N++V + G +D AM++F M ++D+VSW AM+ GLA +G+ ++A LF M +
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 408 FGPDKYTFVGVLCACTHAGFIDKGVQYFYSM-ERDYGILPQVEHYGCMIDLLGRSGRLKE 466
++ ++ ID+ Q F M ERD+ + MI R+ + +
Sbjct: 233 I----ISWNAMITGYAQNNRIDEADQLFQVMPERDFA------SWNTMITGFIRNREMNK 282
Query: 467 ALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAA 526
A L MP E N I W T++ ++ E A V ++R GS N +I +A
Sbjct: 283 ACGLFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKMLR-DGSVKPNVGTYVSILSA 340
Query: 527 TGD 529
D
Sbjct: 341 CSD 343
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 323/655 (49%), Gaps = 118/655 (18%)
Query: 47 RDPYIAPKLISSLALCRQ---------MGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNA 97
RD Y K ++ AL R M A+++F+++ D L+N +I+ L
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 98 QAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLI 157
+A + + M GV D FTYPF++K+ G + + IHA++ K G+ D++V NSLI
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 158 DSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEM------PE 211
Y K G A+K+F M ERDIVSWNSMI+G + G+ + LF EM P+
Sbjct: 173 SLYMKLGCAWD--AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 212 R----------------------------------DAVSWNTILDGYAKAGEMNLAFELF 237
R D + +ILD Y+K GE++ A +F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 238 EKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAK-----------TLVPWTIIISG- 285
+ RNIV+W+ M+ Y+++G + A L F +M + L+P + I+ G
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR 350
Query: 286 ------------------------YAEKGMAKEAARLYDQMEE----------------- 304
Y E G K A ++D+M E
Sbjct: 351 TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNG 410
Query: 305 --------------AGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCN 350
+ L PD T+ SIL A AES L G ++HA I K R+ NT + N
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 351 ALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGP 410
+LV MYA CG L++A FN + KD+VSWN+++ A+HG G ++ LFS M P
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530
Query: 411 DKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRL 470
+K TF +L AC+ +G +D+G +YF SM+R+YGI P +EHYGCM+DL+GR+G A R
Sbjct: 531 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
Query: 471 VQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDW 530
++ MP P A IWG+LL A R H + +AE + + +++ + G Y +L N++A G W
Sbjct: 591 LEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRW 650
Query: 531 NKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGK 585
V ++L M+ + S S+VE + H F+ D+ H + +IY++++ + +
Sbjct: 651 EDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSR 705
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 329/604 (54%), Gaps = 43/604 (7%)
Query: 35 QLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNS 94
Q+ I+K+ +D ++ L+ A C ++ A KVF+++ + +V + ++I +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 95 LNAQAFRVFLDM-QEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 153
A +F M +++ V ++ T ++ AC + ++A I G + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 154 NSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEM---- 209
++L+D Y KC + V AK+LF G ++ N+M + V+ G EA +F+ M
Sbjct: 275 SALVDMYMKCNAIDV--AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 210 --PERDAV-----------------------------SW----NTILDGYAKAGEMNLAF 234
P+R ++ SW N ++D Y K + AF
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 235 ELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKE 294
+F+++ ++ +V+W+++V GY ++G+++ A F+ MP K +V W IISG + + +E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 295 AARLYDQME-EAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALV 353
A ++ M+ + G+ D T++SI +AC G L L ++ I K + + + LV
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 354 DMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKY 413
DM+++CG ++AMS+FN +T +D+ +W A + +AM G E+A+ LF M ++G PD
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 414 TFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQS 473
FVG L AC+H G + +G + FYSM + +G+ P+ HYGCM+DLLGR+G L+EA++L++
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 474 MPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKV 533
MP+EPN +IW +LL ACR VE+A + + L G+Y +LSN++A+ G WN +
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 534 ANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHA 593
A VRL MK+ +KP G SS+++ + HEF+ D+ HP+ I M++ + + +GH
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 594 AKLS 597
LS
Sbjct: 753 PDLS 756
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 82/586 (13%)
Query: 8 PTWFSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLIS---SLALCRQ 64
P+ ++ + + +L CK +++ K + K L D KL++ L
Sbjct: 23 PSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRES 82
Query: 65 MGLAIKVFNDIQD-PDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLK 123
+ A +VF + + +YN+LIR + L +A +FL M G+ D +T+PF L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 124 ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDI 183
AC IH LI K GY D+FV NSL+ Y++CG + A+K+F M ER++
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG--ELDSARKVFDEMSERNV 200
Query: 184 VSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTI-----LDGYAKAGEMNLAFELFE 238
VSW SMI G + +A LF M + V+ N++ + AK ++ +++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 239 KIPHRNI----VSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKE 294
I + I + S +V Y K +++AK LFD A L + S Y +G+ +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 295 AARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVD 354
A +++ M ++G++PD +++S +++C++ + G H + + F+ N+CNAL+D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 355 MYAKC-------------------------------GSLDNAMSVFNGMTKKDLVSWNAM 383
MY KC G +D A F M +K++VSWN +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 384 LYGLAMHGQGEKALGLFSRMKD-EGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
+ GL E+A+ +F M+ EG D T + + AC H G +D +Y +E++
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN- 499
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMP--------------------------- 475
GI V ++D+ R G + A+ + S+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 476 -------VEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDP 514
++P+ + + L AC V+ +E+ +++L G P
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 30 LNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRA 89
L+ K ++ I K +Q D + L+ + C A+ +FN + + DV + I A
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 90 CVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACN-------GKNWFHLVQMIHALIY 142
+A +F DM E+G+ D + L AC+ GK F+ + +H +
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 143 KCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEA 202
+ ++G ++D + G++ ++ M M D++ WNS++A G + A
Sbjct: 606 EDVHYG------CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658
Query: 203 RRLFDEM----PERDAVSWNTILDGYAKAGEMN 231
+++ PER S+ + + YA AG N
Sbjct: 659 AYAAEKIQVLAPERTG-SYVLLSNVYASAGRWN 690
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 338 bits (868), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 292/531 (54%), Gaps = 8/531 (1%)
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDM-QEKGVFTDNFTYPFLLKACN 126
A KVF+ + + D L+NT+I +N + ++ +VF D+ E D T +L A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 127 GKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSW 186
L IH+L K G + +V I YSKCG + + LF + DIV++
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG--KIKMGSALFREFRKPDIVAY 290
Query: 187 NSMIAGLVKGGELSEARRLFDEMPERDA-VSWNTILDGYAKAGEMNLAFELFEKIPHRNI 245
N+MI G GE + LF E+ A + +T++ +G + L + + N
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF 350
Query: 246 VSWSTMVWG----YSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQ 301
+S +++ YSK ++E A+ LFD P K+L W +ISGY + G+ ++A L+ +
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 302 MEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGS 361
M+++ P+ T+ IL+ACA+ G L LG VH + F+ + V AL+ MYAKCGS
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 362 LDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCA 421
+ A +F+ MTKK+ V+WN M+ G +HGQG++AL +F M + G P TF+ VL A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 422 CTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAI 481
C+HAG + +G + F SM YG P V+HY CM+D+LGR+G L+ AL+ +++M +EP +
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 482 IWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMK 541
+W TLLGACR H LA V + L L + G + +LSNI +A ++ + A VR K
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 542 KTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
K + K G + +E+ H F+ DQ HP+ ++IY+ + L ++ G+
Sbjct: 651 KRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY 701
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/545 (22%), Positives = 218/545 (40%), Gaps = 84/545 (15%)
Query: 26 KCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNT 85
+ +++ Q AQII + D + KL L+ + A +F +Q PDV L+N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 86 LIRACVQNSLNAQAFRVFLDMQEKGVFTDNF-TYPFLLKACNGKNWFHLVQMIHALIYKC 144
L+R N + VF +++ N TY F + A +G ++
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG--------------FRD 134
Query: 145 GYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARR 204
G + +++D ++G ++ K F K + +AR+
Sbjct: 135 DRAGRVIHGQAVVDGCDSELLLGSNIVKMYF-------------------KFWRVEDARK 175
Query: 205 LFDEMPERDAVSWNTILDGY------------------------------------AKAG 228
+FD MPE+D + WNT++ GY A+
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 229 EMNLAFELFEKIPHRNIVSWSTMVWG----YSKDGDMEMAKLLFDRMPAKTLVPWTIIIS 284
E+ L ++ S ++ G YSK G ++M LF +V + +I
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 285 GYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKC 344
GY G + + L+ ++ +G + TL+S++ SG L L +H K F
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLS 352
Query: 345 NTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMK 404
+ +V AL +Y+K +++A +F+ +K L SWNAM+ G +G E A+ LF M+
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ 412
Query: 405 DEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRL 464
F P+ T +L AC G + G ++ + + R + +I + + G +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 465 KEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRL--KGSDPGNYTMLSN 522
EA RL M + N + W T++ H +E L+ + G P T L
Sbjct: 472 AEARRLFDLM-TKKNEVTWNTMISGYGLHGQ---GQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 523 IFAAT 527
++A +
Sbjct: 528 LYACS 532
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 159/351 (45%), Gaps = 15/351 (4%)
Query: 50 YIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEK 109
Y+ IS + C ++ + +F + + PD+ YN +I N + +F ++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 110 GVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVS 169
G + T L+ L+ IH K + V +L YSK +
Sbjct: 317 GARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLN--EIE 371
Query: 170 LAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERD----AVSWNTILDGYA 225
A+KLF E+ + SWN+MI+G + G +A LF EM + + V+ IL A
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 226 KAGEMNL---AFELFEKIPHRNIVSWSTMVWG-YSKDGDMEMAKLLFDRMPAKTLVPWTI 281
+ G ++L +L + + ST + G Y+K G + A+ LFD M K V W
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 282 IISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHAS-INKY 340
+ISGY G +EA ++ +M +G+ P T + +L AC+ +GL+ G ++ S I++Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 341 RFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVS-WNAMLYGLAMH 390
F+ + +VD+ + G L A+ M+ + S W +L +H
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 140/319 (43%), Gaps = 21/319 (6%)
Query: 215 VSWNTILDGYAKAGEM-NLAFELFEKIPH--RNIVSWSTMVWGYSKD-GDMEMAKLLFDR 270
+S NT LD + ++ + +LA + I H RN +S T + D G + A+ +F
Sbjct: 18 ISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 271 MPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAG-LKPDDGTLISILAACAESGLLG- 328
+ + + +++ G++ + ++ + ++ LKP+ T A A SG
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA--FAISAASGFRDD 135
Query: 329 -LGMKVH--ASINKYRFKCNTNVC--NALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAM 383
G +H A ++ C++ + + +V MY K +++A VF+ M +KD + WN M
Sbjct: 136 RAGRVIHGQAVVDG----CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 384 LYGLAMHGQGEKALGLFSRMKDEGFGP-DKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
+ G + +++ +F + +E D T + +L A + G+Q +S+
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ-IHSLATKT 250
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEV 502
G I L + G++K L + +P+ + + ++ + EL+ +
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELSLSL 309
Query: 503 LDCLIRLKGSDPGNYTMLS 521
L+ L G+ + T++S
Sbjct: 310 FKELM-LSGARLRSSTLVS 327
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 33/198 (16%)
Query: 44 DLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVF 103
D + Y++ LI A C + A ++F+ + + +NT+I + +A +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 104 LDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKC 163
+M G+ T+ +L AC+ HA + K G +IF NS+I Y
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACS-----------HAGLVKEG--DEIF--NSMIHRYG-- 552
Query: 164 GVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMP-ERDAVSWNTILD 222
E + + M+ L + G L A + + M E + W T+L
Sbjct: 553 ---------------FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Query: 223 GYAKAGEMNLAFELFEKI 240
+ NLA + EK+
Sbjct: 598 ACRIHKDTNLARTVSEKL 615
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 336/625 (53%), Gaps = 58/625 (9%)
Query: 15 RLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLI--SSLALCRQMGLAIKVF 72
+L + L L C + NQ KQ+ AQI++ +L D + +LI S++ + LA +F
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 73 -NDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWF 131
N +P+V +YNT+I A V +S N + F ++ M V D T+ +L+KA ++
Sbjct: 92 LNFTPNPNVFVYNTMISA-VSSSKN-ECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFL 146
Query: 132 HLVQMIHA--LIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSM 189
V+ IH ++ C G+ ++ NSL+ Y + G GV A+K+F M D+ S+N M
Sbjct: 147 SEVKQIHCHIIVSGCLSLGN-YLWNSLVKFYMELGNFGV--AEKVFARMPHPDVSSFNVM 203
Query: 190 IAGLVKGGELSEARRLFDEM------PERDAV--------------------SW------ 217
I G K G EA +L+ +M P+ V W
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 218 ---------NTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLF 268
N +LD Y K E LA F+ + +++ SW+TMV G+ + GDME A+ +F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 269 DRMPAKTLVPWTIIISGYAEKGMAKEAAR--LYDQMEEAGLKPDDGTLISILAACAESGL 326
D+MP + LV W ++ GY++KG + R Y+ +KPD T++S+++ A +G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 327 LGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYG 386
L G VH + + + K + + +AL+DMY KCG ++ A VF T+KD+ W +M+ G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 387 LAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILP 446
LA HG G++AL LF RM++EG P+ T + VL AC+H+G +++G+ F M+ +G P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 447 QVEHYGCMIDLLGRSGRLKEALRLVQ-SMPVEPNAIIWGTLLGACRKHNAVELAEEVLDC 505
+ EHYG ++DLL R+GR++EA +VQ MP+ P+ +WG++L ACR +E AE L
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 506 LIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSV 565
L++L+ G Y +LSNI+A G W R M+ +K +G SSV +H F
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVA 623
Query: 566 CD-QLHPKSEQIYQMINTLGKDLKP 589
+ Q HP+ +I +++ L ++KP
Sbjct: 624 AEKQNHPRWTEIKRILQHLYNEMKP 648
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 6 RAPTWFSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQM 65
R P + S L L KCK K+ F + K D++ ++ M
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRS----WNTMVVGFVRLGDM 316
Query: 66 GLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFR-VFLDMQ-EKGVFTDNFTYPFLLK 123
A VF+ + D+ +N+L+ + + + R +F +M + V D T L+
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 124 ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDI 183
+ +H L+ + GD F+ ++LID Y KCG+ + A +F + E+D+
Sbjct: 377 GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGI--IERAFMVFKTATEKDV 434
Query: 184 VSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTIL 221
W SMI GL G +A +LF M E N L
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTL 472
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 317/568 (55%), Gaps = 14/568 (2%)
Query: 34 KQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQN 93
KQ+ A I++ L+ D + LI S C ++ A K+FN + + ++ + TL+ QN
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 94 SLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 153
+L+ +A +F M + G+ D + +L +C + +HA K D +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 154 NSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG---ELSEARRLFDEMP 210
NSLID Y+KC + + A+K+F D+V +N+MI G + G EL EA +F +M
Sbjct: 389 NSLIDMYAKCDCL--TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 211 ER----DAVSWNTILDGYAKAGEMNLAFE----LFEKIPHRNIVSWSTMVWGYSKDGDME 262
R +++ ++L A + L+ + +F+ + +I + S ++ YS ++
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 263 MAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACA 322
++L+FD M K LV W + +GY ++ +EA L+ +++ + +PD+ T +++ A
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 323 ESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNA 382
+ LG + H + K +CN + NAL+DMYAKCGS ++A F+ +D+V WN+
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 383 MLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
++ A HG+G+KAL + +M EG P+ TFVGVL AC+HAG ++ G++ F M R +
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-F 685
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEV 502
GI P+ EHY CM+ LLGR+GRL +A L++ MP +P AI+W +LL C K VELAE
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA 745
Query: 503 LDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHE 562
+ I D G++TMLSNI+A+ G W + VR +MK K G S + ++ EVH
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHI 805
Query: 563 FSVCDQLHPKSEQIYQMINTLGKDLKPV 590
F D+ H K+ QIY++++ L ++ V
Sbjct: 806 FLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 253/559 (45%), Gaps = 95/559 (16%)
Query: 30 LNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRA 89
L+ + QII L+ D Y++ LI+ + M A KVF + + ++ ++T++ A
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 90 CVQNSLNAQAFRVFLDM-QEKGVFTDNFTYPFLLKACNGKN----WFHLVQMIHALIYKC 144
C + + ++ VFL+ + + + + ++AC+G + W +V + + + K
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW--MVFQLQSFLVKS 177
Query: 145 GYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARR 204
G+ D++V LID Y K G + A+ +F ++ E+ V+W +MI+G VK G + +
Sbjct: 178 GFDRDVYVGTLLIDFYLKDG--NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 205 LFDEMP---------------------------------------ERDAVSWNTILDGYA 225
LF ++ E DA N ++D Y
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 226 KAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISG 285
K G + A +LF +P++NI+SW+T++ GY ++
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN--------------------------- 328
Query: 286 YAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCN 345
+ KEA L+ M + GLKPD SIL +CA LG G +VHA K +
Sbjct: 329 ----ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 346 TNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHG---QGEKALGLFSR 402
+ V N+L+DMYAKC L +A VF+ D+V +NAM+ G + G + +AL +F
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 403 MKDEGFGPDKYTFVGVLCACTHAGFIDKGV-QYFYSMERDYGILPQVEHYGCMIDLLGRS 461
M+ P TFV +L A A G+ + + + YG+ + +ID+
Sbjct: 445 MRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 462 GRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGS--DPGNYTM 519
LK++ + M V+ + +IW ++ + + EE L+ + L+ S P +T
Sbjct: 503 YCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSE---NEEALNLFLELQLSRERPDEFT- 557
Query: 520 LSNIFAATGDWNKVANVRL 538
+N+ A G+ +A+V+L
Sbjct: 558 FANMVTAAGN---LASVQL 573
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 232/503 (46%), Gaps = 17/503 (3%)
Query: 35 QLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNS 94
QL + ++K RD Y+ LI + A VF+ + + + T+I CV+
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 95 LNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPN 154
+ + ++F + E V D + +L AC+ + + IHA I + G D + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 155 SLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMP---- 210
LIDSY KCG V A KLF M ++I+SW ++++G + EA LF M
Sbjct: 289 VLIDSYVKCGRVIA--AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 211 ERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWS----TMVWGYSKDGDMEMAKL 266
+ D + ++IL A + ++ N+ + S +++ Y+K + A+
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 267 LFDRMPAKTLVPWTIIISGYAEKGMA---KEAARLYDQMEEAGLKPDDGTLISILAACAE 323
+FD A +V + +I GY+ G EA ++ M ++P T +S+L A A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 324 SGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAM 383
LGL ++H + KY + +AL+D+Y+ C L ++ VF+ M KDLV WN+M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 384 LYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYG 443
G + E+AL LF ++ PD++TF ++ A + + G Q F+ G
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRG 585
Query: 444 ILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVL 503
+ ++D+ + G ++A + S + + W +++ + H + A ++L
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHGEGKKALQML 644
Query: 504 DCLIRLKGSDPGNYTMLSNIFAA 526
+ ++ +G +P NY + +A
Sbjct: 645 EKMMS-EGIEP-NYITFVGVLSA 665
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 190/392 (48%), Gaps = 16/392 (4%)
Query: 121 LLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGE 180
LL+ + H ++H I G D ++ N LI+ YS+ G G+ A+K+F M E
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAG--GMVYARKVFEKMPE 107
Query: 181 RDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTI-----------LDGYAKAGE 229
R++VSW++M++ G E+ +F E S N LDG +
Sbjct: 108 RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV 167
Query: 230 MNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEK 289
L L + R++ + ++ Y KDG+++ A+L+FD +P K+ V WT +ISG +
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 290 GMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVC 349
G + + +L+ Q+ E + PD L ++L+AC+ L G ++HA I +Y + + ++
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 350 NALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFG 409
N L+D Y KCG + A +FNGM K+++SW +L G + ++A+ LF+ M G
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 410 PDKYTFVGVLCACTHAGFIDKGVQ-YFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEAL 468
PD Y +L +C + G Q + Y+++ + G V + +ID+ + L +A
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDAR 405
Query: 469 RLVQSMPVEPNAIIWGTLLGACRKHNAVELAE 500
++ + + G R EL E
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 169/372 (45%), Gaps = 62/372 (16%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+L +KQ+ + K L D + LI + C + + VF++++ D+ ++N++
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 148
VQ S N +A +FL++Q D FT+ ++ A L Q H + K G
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 149 DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 208
+ ++ N+L+D Y+KCG A K F S RD+V WNS+I+ GE +A ++ ++
Sbjct: 589 NPYITNALLDMYAKCG--SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 209 M----PERDAVSWNTIL----------DG-------------------------YAKAGE 229
M E + +++ +L DG +AG
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGR 706
Query: 230 MNLAFELFEKIPHR-NIVSWSTMVWGYSKDGDMEMAK------LLFDRMPAKTLVPWTII 282
+N A EL EK+P + + W +++ G +K G++E+A+ +L D K +T++
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD---PKDSGSFTML 763
Query: 283 ISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRF 342
+ YA KGM EA ++ ++M+ G+ + G +G+ +VH ++K +
Sbjct: 764 SNIYASKGMWTEAKKVRERMKVEGVVKEPG-----------RSWIGINKEVHIFLSKDKS 812
Query: 343 KCNTNVCNALVD 354
C N ++D
Sbjct: 813 HCKANQIYEVLD 824
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 311/564 (55%), Gaps = 75/564 (13%)
Query: 30 LNQTKQLFAQIIK--LDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLI 87
+N KQL A ++ +D +D L+ L L + A K+F+ Q+ LYN LI
Sbjct: 1 MNGIKQLHAHCLRTGVDETKD------LLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 88 RACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYF 147
+A + ++ ++ + G+ + T+ F+ A + ++++H+ ++ G+
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 148 GDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFD 207
D F +LI +Y+ K G L ARR+FD
Sbjct: 115 SDSFCCTTLITAYA---------------------------------KLGALCCARRVFD 141
Query: 208 EMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLL 267
EM +RD WN ++ GY + G+M A ELF+ +P +N+ SW+T++ G+S++G+
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNY------ 195
Query: 268 FDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME-EAGLKPDDGTLISILAACAESGL 326
EA +++ ME + +KP+ T++S+L ACA G
Sbjct: 196 -------------------------SEALKMFLCMEKDKSVKPNHITVVSVLPACANLGE 230
Query: 327 LGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGM-TKKDLVSWNAMLY 385
L +G ++ + F N VCNA ++MY+KCG +D A +F + +++L SWN+M+
Sbjct: 231 LEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIG 290
Query: 386 GLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGIL 445
LA HG+ ++AL LF++M EG PD TFVG+L AC H G + KG + F SME + I
Sbjct: 291 SLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKIS 350
Query: 446 PQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDC 505
P++EHYGCMIDLLGR G+L+EA L+++MP++P+A++WGTLLGAC H VE+AE +
Sbjct: 351 PKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEA 410
Query: 506 LIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASS-VEVDNEVHEFS 564
L +L+ ++PGN ++SNI+AA W+ V +R MKK K +G S VEV +VH+F+
Sbjct: 411 LFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFT 470
Query: 565 VCDQLHPKSEQIYQMINTLGKDLK 588
V D+ HP+S +IYQ++ + + +K
Sbjct: 471 VEDKSHPRSYEIYQVLEEIFRRMK 494
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/643 (31%), Positives = 321/643 (49%), Gaps = 80/643 (12%)
Query: 32 QTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACV 91
+T Q A+I+K Q D YI+ KLI+S + A V I DP ++ +++LI A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 92 QNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIF 151
+ L Q+ VF M G+ D+ P L K C + F + + IH + G D F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 152 VPNSLIDSYSKCGVVGVSLAKKLFMSMGERD----------------------------- 182
V S+ Y +CG +G A+K+F M ++D
Sbjct: 153 VQGSMFHMYMRCGRMGD--ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 183 ------IVSWNSMIAGLVKGGELSEARRLFDEM------PERDAVS-------------- 216
IVSWN +++G + G EA +F ++ P++ VS
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 217 -------------------WNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSK 257
+ ++D Y K+G + LF + + + G S+
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 258 DGDMEMAKLLFDRMPAKTL----VPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGT 313
+G ++ A +F+ +T+ V WT II+G A+ G EA L+ +M+ AG+KP+ T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 314 LISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMT 373
+ S+L AC LG G H + N +V +AL+DMYAKCG ++ + VFN M
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 374 KKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQ 433
K+LV WN+++ G +MHG+ ++ + +F + PD +F +L AC G D+G +
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 434 YFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKH 493
YF M +YGI P++EHY CM++LLGR+G+L+EA L++ MP EP++ +WG LL +CR
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 494 NAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASS 553
N V+LAE + L L+ +PG Y +LSNI+AA G W +V ++R +M+ +K G S
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 554 VEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHAAKL 596
++V N V+ D+ HP+ +QI + ++ + K+++ GH L
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNL 673
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 293/527 (55%), Gaps = 12/527 (2%)
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNG 127
A KVF+ + + +V + L++ V N A +F M EK + L+
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRI 157
Query: 128 KNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWN 187
+ L +MI D S+I K G V A+++F M ER +++W
Sbjct: 158 DDACKLYEMIPD--------KDNIARTSMIHGLCKEG--RVDEAREIFDEMSERSVITWT 207
Query: 188 SMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS 247
+M+ G + + +AR++FD MPE+ VSW ++L GY + G + A ELFE +P + +++
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 248 WSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGL 307
+ M+ G + G++ A+ +FD M + W +I + G EA L+ M++ G+
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 308 KPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMS 367
+P TLISIL+ CA L G +VHA + + +F + V + L+ MY KCG L +
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 368 VFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEG-FGPDKYTFVGVLCACTHAG 426
+F+ KD++ WN+++ G A HG GE+AL +F M G P++ TFV L AC++AG
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 427 FIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTL 486
+++G++ + SME +G+ P HY CM+D+LGR+GR EA+ ++ SM VEP+A +WG+L
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 487 LGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQ 546
LGACR H+ +++AE LI ++ + G Y +LSN++A+ G W VA +R MK +
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVR 567
Query: 547 KPSGASSVEVDNEVHEFSVCD-QLHPKSEQIYQMINTLGKDLKPVGH 592
K G S EV+N+VH F+ HP+ E I ++++ L L+ G+
Sbjct: 568 KSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 172/351 (49%), Gaps = 50/351 (14%)
Query: 171 AKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEM 230
A+KLF S + I SWNSM+AG +AR+LFDEMP+R+ +SWN ++ GY K GE+
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEI 95
Query: 231 NLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKG 290
+ A ++F+ +P RN+VSW+ +V GY +G +++A+ LF +MP K V WT+++ G+ + G
Sbjct: 96 DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDG 155
Query: 291 MAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCN 350
+A +LY+ + + D+ S++ + G + ++ +++ T
Sbjct: 156 RIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT--- 208
Query: 351 ALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGP 410
+V Y + +D+A +F+ M +K VSW +ML G +G+ E A LF M
Sbjct: 209 -MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP------ 261
Query: 411 DKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRL 470
V + AC MI LG+ G + +A R+
Sbjct: 262 -----VKPVIAC-----------------------------NAMISGLGQKGEIAKARRV 287
Query: 471 VQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLS 521
SM E N W T++ + N EL L L++ +G P T++S
Sbjct: 288 FDSMK-ERNDASWQTVI-KIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 85/376 (22%)
Query: 61 LCRQ--MGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTY 118
LC++ + A ++F+++ + V + T++ QN+ A ++F M EK +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS----- 236
Query: 119 PFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSM 178
W ++ GY V N I+ A++LF M
Sbjct: 237 -----------WTSMLM---------GY-----VQNGRIED-----------AEELFEVM 260
Query: 179 GERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELF- 237
+ +++ N+MI+GL + GE+++ARR+FD M ER+ SW T++ + + G A +LF
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 238 -----------------------------EKIPHRNIVSW---------STMVWGYSKDG 259
K H +V S ++ Y K G
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 260 DMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAG-LKPDDGTLISIL 318
++ +KL+FDR P+K ++ W IISGYA G+ +EA +++ +M +G KP++ T ++ L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 319 AACAESGLLGLGMKVHASINK-YRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMT-KKD 376
+AC+ +G++ G+K++ S+ + K T +VDM + G + AM + + MT + D
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 377 LVSWNAMLYGLAMHGQ 392
W ++L H Q
Sbjct: 501 AAVWGSLLGACRTHSQ 516
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+L+ KQ+ AQ+++ D Y+A L++ C ++ + +F+ D+ ++N++I
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIIS 405
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDN-FTYPFLLKACNGKNWFHLVQMIHALIYKCGYF 147
+ L +A +VF +M G N T+ L AC
Sbjct: 406 GYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC---------------------- 443
Query: 148 GDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVS-WNSMIAGLVKGGELSEARRLF 206
SY+ G+ + + + G + I + + M+ L + G +EA +
Sbjct: 444 -----------SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 207 DEMP-ERDAVSWNTILDGYAKAGEMNLA 233
D M E DA W ++L ++++A
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTHSQLDVA 520
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 312/561 (55%), Gaps = 13/561 (2%)
Query: 34 KQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQN 93
+ + A +IK D ++ + C + A KVF + + D +N ++ Q+
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 94 SLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 153
+AF +F +M+ + D+ T L+++ + + L++ +HA+ + G + V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 154 NSLIDSYSKCGVVGVSLAKKLFMSM--GERDIVSWNSMIAGLVKGGELSEARRLF----D 207
N+ I +Y KCG + AK +F ++ G+R +VSWNSM GE +A L+
Sbjct: 192 NTWISTYGKCG--DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 208 EMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPH----RNIVSWSTMVWGYSKDGDMEM 263
E + D ++ + + + H ++I + +T + YSK D
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 264 AKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAE 323
A+LLFD M ++T V WT++ISGYAEKG EA L+ M ++G KPD TL+S+++ C +
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 324 SGLLGLGMKVHASINKYRFKC-NTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNA 382
G L G + A + Y K N +CNAL+DMY+KCGS+ A +F+ +K +V+W
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 383 MLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDY 442
M+ G A++G +AL LFS+M D + P+ TF+ VL AC H+G ++KG +YF+ M++ Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 443 GILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEV 502
I P ++HY CM+DLLGR G+L+EAL L+++M +P+A IWG LL AC+ H V++AE+
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 503 LDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHE 562
+ L L+ Y ++NI+AA G W+ A +R MK+ +K G S ++V+ + H
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHS 609
Query: 563 FSVCDQLHPKSEQIYQMINTL 583
F+V + H ++E IY +N L
Sbjct: 610 FTVGEHGHVENEVIYFTLNGL 630
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 197/430 (45%), Gaps = 35/430 (8%)
Query: 80 VHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHA 139
V+ +N IR V + ++ +F +M+ G +NFT+PF+ KAC +M+HA
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 140 LIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGEL 199
+ K ++ D+FV + +D + KC V A K+F M ERD +WN+M++G + G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCN--SVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 200 SEARRLFDEMP----ERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR-----NIVSWST 250
+A LF EM D+V+ T++ + + L E + R + +T
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMHAVGIRLGVDVQVTVANT 193
Query: 251 MVWGYSKDGDMEMAKLLFDRMPA--KTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLK 308
+ Y K GD++ AKL+F+ + +T+V W + Y+ G A +A LY M K
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 309 PDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSV 368
PD T I++ A+C L G +H+ + N + MY+K +A +
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 369 FNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFI 428
F+ MT + VSW M+ G A G ++AL LF M G PD T + ++ C G
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG-- 371
Query: 429 DKGVQYFYSMERDYGILPQVEHYGC----------MIDLLGRSGRLKEALRLVQSMPVEP 478
S+E I + + YGC +ID+ + G + EA + + P E
Sbjct: 372 --------SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EK 422
Query: 479 NAIIWGTLLG 488
+ W T++
Sbjct: 423 TVVTWTTMIA 432
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 158/365 (43%), Gaps = 15/365 (4%)
Query: 170 LAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGE 229
+ ++L+ G + +WN I V + E+ LF EM +R N +
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKAC 62
Query: 230 MNLAFELFEKIPHRNIVS---WSTMVWG------YSKDGDMEMAKLLFDRMPAKTLVPWT 280
LA ++ H +++ WS + G + K ++ A +F+RMP + W
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 281 IIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKY 340
++SG+ + G +A L+ +M + PD T+++++ + + L L +HA +
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 341 RFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKD--LVSWNAMLYGLAMHGQGEKALG 398
V N + Y KCG LD+A VF + + D +VSWN+M ++ G+ A G
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 399 LFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLL 458
L+ M E F PD TF+ + +C + + +G + +S G +E I +
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 459 GRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYT 518
+S A RL+ + + W ++ + ++ A + +I+ G P T
Sbjct: 302 SKSEDTCSA-RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK-SGEKPDLVT 359
Query: 519 MLSNI 523
+LS I
Sbjct: 360 LLSLI 364
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 17/262 (6%)
Query: 27 CKN---LNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLY 83
C+N L Q + + + I L +D IS + A +F+ + +
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 84 NTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHAL--I 141
+I + +A +F M + G D T L+ C + I A I
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI 385
Query: 142 YKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSE 201
Y C ++ + N+LID YSKCG + A+ +F + E+ +V+W +MIAG G E
Sbjct: 386 YGCKR-DNVMICNALIDMYSKCG--SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442
Query: 202 ARRLFDEMPERD----AVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS-----WSTMV 252
A +LF +M + D +++ +L A +G + +E F + +S +S MV
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMV 502
Query: 253 WGYSKDGDMEMAKLLFDRMPAK 274
+ G +E A L M AK
Sbjct: 503 DLLGRKGKLEEALELIRNMSAK 524
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 313/579 (54%), Gaps = 16/579 (2%)
Query: 24 LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLY 83
L C+ + ++ +K D Y+A LI + + +G A +F+++ D+ +
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 84 NTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYK 143
N +I Q+ +A + ++ D+ T LL AC F+ IH+ K
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
Query: 144 CGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEAR 203
G ++FV N LID Y++ G + +K+F M RD++SWNS+I + A
Sbjct: 276 HGLESELFVSNKLIDLYAEFG--RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 204 RLFDEM------PE-RDAVSWNTILD--GYAKAGEMNLAFELFEKIPHRNIVSWSTMVWG 254
LF EM P+ +S +IL G +A F L + +I + +V
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 255 YSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAG-LKPDDGT 313
Y+K G ++ A+ +F+ +P ++ W IISGYA+ G A EA +Y+ MEE G + + GT
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 314 LISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMT 373
+S+L AC+++G L GMK+H + K + V +L DMY KCG L++A+S+F +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 374 KKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQ 433
+ + V WN ++ HG GEKA+ LF M DEG PD TFV +L AC+H+G +D+G
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 434 YFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKH 493
F M+ DYGI P ++HYGCM+D+ GR+G+L+ AL+ ++SM ++P+A IWG LL ACR H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 494 NAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASS 553
V+L + + L ++ G + +LSN++A+ G W V +R +K G SS
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693
Query: 554 VEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
+EVDN+V F +Q HP E++Y+ + L LK +G+
Sbjct: 694 MEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGY 732
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 263/516 (50%), Gaps = 31/516 (6%)
Query: 27 CKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTL 86
C NL K L A+++ ++ I+ KL++ + LA F+ IQ+ DV+ +N +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 87 IRACVQNSLNAQAFRVF-LDMQEKGVFTDNFTYPFLLKAC----NGKNWFHLVQMIHALI 141
I + +++ R F L M G+ D T+P +LKAC +G IH L
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK-------IHCLA 176
Query: 142 YKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSE 201
K G+ D++V SLI YS+ VG A+ LF M RD+ SWN+MI+G + G E
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGN--ARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 202 ARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFE-KIPH---RNIVSWSTMVWGYSK 257
A L + + D+V+ ++L +AG+ N + I H + + ++ Y++
Sbjct: 235 ALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 258 DGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISI 317
G + + +FDRM + L+ W II Y A L+ +M + ++PD TLIS+
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 318 LAACAESGLLGLGMKVHA-SINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKD 376
+ ++ G + V ++ K F + + NA+V MYAK G +D+A +VFN + D
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 377 LVSWNAMLYGLAMHGQGEKALGLFSRMKDEG-FGPDKYTFVGVLCACTHAGFIDKGVQYF 435
++SWN ++ G A +G +A+ +++ M++EG ++ T+V VL AC+ AG + +G++
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 436 YSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKH-- 493
+ ++ G+ V + D+ G+ GRL++AL L +P N++ W TL+ H
Sbjct: 475 GRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGH 532
Query: 494 --NAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAAT 527
AV L +E+LD +G P + T ++ + A +
Sbjct: 533 GEKAVMLFKEMLD-----EGVKPDHITFVTLLSACS 563
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 298/551 (54%), Gaps = 46/551 (8%)
Query: 75 IQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLV 134
+Q P + +YN ++++ + +F +++ +G++ DNFT P +LK+
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 135 QMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLV 194
+ +H K G D +V NSL+ Y+ G + + K+F M +RD+VSWN +I+ V
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLG--KIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 195 KGGELSEARRLFDEMPERDAVSW------------------------------------- 217
G +A +F M + + +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 218 --NTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKT 275
N ++D + K G ++ A +F+ + +N+ W++MV+GY G ++ A++LF+R P K
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 276 LVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHA 335
+V WT +++GY + EA L+ M+ AG++PD+ L+S+L CA++G L G +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 336 SINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEK 395
IN+ R + V ALVDMYAKCG ++ A+ VF + ++D SW +++YGLAM+G +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 396 ALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMI 455
AL L+ M++ G D TFV VL AC H GF+ +G + F+SM + + P+ EH C+I
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 456 DLLGRSGRLKEALRLVQSMPVEPNAI---IWGTLLGACRKHNAVELAEEVLDCLIRLKGS 512
DLL R+G L EA L+ M E + ++ +LL A R + V++AE V + L +++ S
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 513 DPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQL--H 570
D +T+L++++A+ W V NVR +MK +K G SS+E+D HEF V D L H
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Query: 571 PKSEQIYQMIN 581
PK ++I M++
Sbjct: 544 PKMDEINSMLH 554
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 179/393 (45%), Gaps = 44/393 (11%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
L+++ + + + + +++ +K L+ D Y++ L+ A ++ + KVF+++ DV
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV 112
Query: 81 HLYNTLIRACVQNSLNAQAFRVFLDM-QEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHA 139
+N LI + V N A VF M QE + D T L AC+ + + I+
Sbjct: 113 VSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYR 172
Query: 140 LIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGEL 199
+ + + + N+L+D + KCG + A+ +F SM ++++ W SM+ G V G +
Sbjct: 173 FVVT-EFEMSVRIGNALVDMFCKCGC--LDKARAVFDSMRDKNVKCWTSMVFGYVSTGRI 229
Query: 200 SEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNI-------------- 245
EAR LF+ P +D V W +++GY + + A ELF + I
Sbjct: 230 DEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
Query: 246 -------------------------VSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWT 280
V + +V Y+K G +E A +F + + WT
Sbjct: 290 AQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWT 349
Query: 281 IIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKV-HASINK 339
+I G A GM+ A LY +ME G++ D T +++L AC G + G K+ H+ +
Sbjct: 350 SLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Query: 340 YRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGM 372
+ + + C+ L+D+ + G LD A + + M
Sbjct: 410 HNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 248/375 (66%), Gaps = 2/375 (0%)
Query: 220 ILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPW 279
++D YAK G++ A ++F+++P R++VS + M+ Y+K G++E A+ LFD M + +V W
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 280 TIIISGYAEKGMAKEAARLYDQM-EEAGLKPDDGTLISILAACAESGLLGLGMKVHASIN 338
++I GYA+ G +A L+ ++ E KPD+ T+++ L+AC++ G L G +H +
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 339 KYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALG 398
R + N VC L+DMY+KCGSL+ A+ VFN +KD+V+WNAM+ G AMHG + AL
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 399 LFSRMKD-EGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDL 457
LF+ M+ G P TF+G L AC HAG +++G++ F SM ++YGI P++EHYGC++ L
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 458 LGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNY 517
LGR+G+LK A +++M ++ ++++W ++LG+C+ H L +E+ + LI L + G Y
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 518 TMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIY 577
+LSNI+A+ GD+ VA VR MK+ K G S++E++N+VHEF D+ H KS++IY
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
Query: 578 QMINTLGKDLKPVGH 592
M+ + + +K G+
Sbjct: 527 TMLRKISERIKSHGY 541
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 206/420 (49%), Gaps = 53/420 (12%)
Query: 19 EKLQNL-HKCKNLNQTKQLFAQIIKLDL---QRDPYIAPKLISSLALCRQMGLAIKVFND 74
EKL L K +++++ Q+ A I++ +L R P + KL + A ++ ++ +F+
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 75 IQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLV 134
DPD+ L+ I N L QAF +++ + + + FT+ LLK+C+ K+
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG---- 145
Query: 135 QMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLV 194
++IH + K G D +V L+D Y+K G V A+K+F M ER +VS +MI
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGG--DVVSAQKVFDRMPERSLVSSTAMITCYA 203
Query: 195 KGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKI-------PHR---- 243
K G + AR LFD M ERD VSWN ++DGYA+ G N A LF+K+ P
Sbjct: 204 KQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVV 263
Query: 244 -----------------------------NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAK 274
N+ + ++ YSK G +E A L+F+ P K
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 275 TLVPWTIIISGYAEKGMAKEAARLYDQMEE-AGLKPDDGTLISILAACAESGLLGLGMKV 333
+V W +I+GYA G +++A RL+++M+ GL+P D T I L ACA +GL+ G+++
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 334 HASI-NKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMT-KKDLVSWNAMLYGLAMHG 391
S+ +Y K LV + + G L A M D V W+++L +HG
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 38/304 (12%)
Query: 254 GYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGT 313
Y+ G + + LF + L +T I+ + G+ +A LY Q+ + + P++ T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 314 LISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAK--------------- 358
S+L +C+ G +H + K+ + V LVD+YAK
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 359 ------------C----GSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSR 402
C G+++ A ++F+ M ++D+VSWN M+ G A HG AL LF +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 403 MKDEGF-GPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRS 461
+ EG PD+ T V L AC+ G ++ G ++ + + I V+ +ID+ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 462 GRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLS 521
G L+EA+ + P + + W ++ H + A + + + + G P + T +
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 522 NIFA 525
+ A
Sbjct: 367 TLQA 370
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 148/399 (37%), Gaps = 71/399 (17%)
Query: 18 EEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQD 77
E +L K + K + ++K L DPY+A L+ A + A KVF+ + +
Sbjct: 130 EFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 78 PDVHLYNTLIRACVQNSLNAQAFRVFLD-MQEKGVFT----------------------- 113
+ + +T + C N +A R D M E+ + +
Sbjct: 190 RSL-VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 114 ---------DNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCG 164
D T L AC+ + IH + ++ V LID YSKCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 165 VVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMP-----ERDAVSWNT 219
+ A +F +DIV+WN+MIAG G +A RLF+EM + +++
Sbjct: 309 --SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 220 ILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPW 279
L A AG +N +FE +M Y +E L +
Sbjct: 367 TLQACAHAGLVNEGIRIFE-----------SMGQEYGIKPKIEHYGCLVSLL-------- 407
Query: 280 TIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINK 339
G A + R Y+ ++ + D S+L +C G LG ++ +
Sbjct: 408 ----------GRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG 457
Query: 340 YRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLV 378
K N+ + L ++YA G + V N M +K +V
Sbjct: 458 LNIK-NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 331 MKVHASINKYRFKCNTN--VCN-ALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGL 387
+++HA+I ++ + V N L YA G + +++++F+ DL + A +
Sbjct: 46 LQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 105
Query: 388 AMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCAC-THAGFIDKGVQYFYSMERDYGILP 446
+++G ++A L+ ++ P+++TF +L +C T +G + + + ++ GI P
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG----KLIHTHVLKFGLGIDP 161
Query: 447 QVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGAC-RKHNAVELAEEVLDC 505
V ++D+ + G + A ++ MP +++ T + C K VE A + D
Sbjct: 162 YVA--TGLVDVYAKGGDVVSAQKVFDRMP--ERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 506 L 506
+
Sbjct: 218 M 218
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 328 bits (842), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 289/526 (54%), Gaps = 16/526 (3%)
Query: 81 HLYNTLIRACVQNSLNAQAFR-VFLDMQEKGVFTDNFTYPFLLKAC---NGKNWFHLVQM 136
+LY T+ +C+Q + + + M + G+ D++ L C ++ Q+
Sbjct: 13 NLYETM--SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI 70
Query: 137 IHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLA--KKLFMSMGERDIVSWNSMIAGLV 194
+ + D F+ N +I +S SL +++ S + ++ S++
Sbjct: 71 VFDGFDR----PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 195 KGGELSEARRLFDEMP----ERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWST 250
E ++ ++ E D + N++++ YA G LA LF++IP + VSW++
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 251 MVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPD 310
++ GY K G M++A LF +M K + WT +ISGY + M KEA +L+ +M+ + ++PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 311 DGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFN 370
+ +L + L+ACA+ G L G +H+ +NK R + ++ + L+DMYAKCG ++ A+ VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 371 GMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDK 430
+ KK + +W A++ G A HG G +A+ F M+ G P+ TF VL AC++ G +++
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 431 GVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGAC 490
G FYSMERDY + P +EHYGC++DLLGR+G L EA R +Q MP++PNA+IWG LL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 491 RKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSG 550
R H +EL EE+ + LI + G Y +NI A W+K A R MK+ K G
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 551 ASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHAAKL 596
S++ ++ HEF D+ HP+ E+I + + L+ G+ +L
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPEL 532
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 201/428 (46%), Gaps = 46/428 (10%)
Query: 11 FSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLIS---SLALCRQMGL 67
FS L E + L +C + KQ+ A+++K L +D Y K +S S +
Sbjct: 8 FSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPY 67
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNG 127
A VF+ PD L+N +IR + ++ ++ M + +T+P LLKAC+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 128 KNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWN 187
+ F IHA I K GY D++ NSLI+SY+ G LA LF + E D VSWN
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTG--NFKLAHLLFDRIPEPDDVSWN 185
Query: 188 SMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNI-- 245
S+I G VK G++ A LF +M E++A+SW T++ GY +A A +LF ++ + ++
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 246 -------------------------------------VSWSTMVWGYSKDGDMEMAKLLF 268
V ++ Y+K G+ME A +F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 269 DRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLG 328
+ K++ WT +ISGYA G +EA + +M++ G+KP+ T ++L AC+ +GL+
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 329 LGMKVHASINK-YRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMT-KKDLVSWNAMLYG 386
G + S+ + Y K +VD+ + G LD A M K + V W A+L
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 387 LAMHGQGE 394
+H E
Sbjct: 426 CRIHKNIE 433
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 143/349 (40%), Gaps = 71/349 (20%)
Query: 24 LHKCKNLN---QTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
L C NL+ +T Q+ AQI KL + D Y LI+S A+ LA +F+ I +PD
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 81 HLYN-------------------------------TLIRACVQNSLNAQAFRVFLDMQEK 109
+N T+I VQ +N +A ++F +MQ
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 110 GVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVS 169
V DN + L AC + IH+ + K D + LID Y+KCG + +
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 170 LAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGE 229
L ++F ++ ++ + +W ++I+G G EA F EM +
Sbjct: 302 L--EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ------------------K 341
Query: 230 MNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMP-----AKTLVPWTIIIS 284
M + N+++++ ++ S G +E KL+F M T+ + I+
Sbjct: 342 MGIK---------PNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 285 GYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKV 333
G+ EA R ++E LKP+ ++L AC + LG ++
Sbjct: 393 LLGRAGLLDEAKRF---IQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 313/597 (52%), Gaps = 80/597 (13%)
Query: 13 KRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGL----- 67
K L+ + L C NLNQ KQ+ +++ L + YI KLI +L ++G+
Sbjct: 45 KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLT---KLGVPMDPY 101
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNG 127
A +V +Q + L+ +IR +A ++ M+++ + +FT+ LLKAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 128 KNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWN 187
+L + HA ++ F ++V N++ID Y KC +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDC------------------- 202
Query: 188 SMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS 247
AR++FDEMPERD +SW ++ YA+ G M A ELFE +P +++V+
Sbjct: 203 --------------ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA 248
Query: 248 WSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGY----AEKGMAKEAARLYDQME 303
W+ MV G++++ + A FDRM + + ++GY A+ G +K A R +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
Query: 304 EAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLD 363
++G P D +I +AL+DMY+KCG+++
Sbjct: 309 KSGYSPSDHVVIG---------------------------------SALIDMYSKCGNVE 335
Query: 364 NAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEG-FGPDKYTFVGVLCAC 422
A++VF M K++ ++++M+ GLA HG+ ++AL LF M + P+ TFVG L AC
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 423 THAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAII 482
+H+G +D+G Q F SM + +G+ P +HY CM+DLLGR+GRL+EAL L+++M VEP+ +
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV 455
Query: 483 WGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKK 542
WG LLGACR HN E+AE + L L+ GNY +LSN++A+ GDW V VR +K+
Sbjct: 456 WGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE 515
Query: 543 TRAQK-PSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHAAKLSA 598
+K P+ + V+ + ++H+F + HP S +I + L + L +G+ LS+
Sbjct: 516 KGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSS 572
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 314/575 (54%), Gaps = 11/575 (1%)
Query: 28 KNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLI 87
++++ +QL I+K + L++ +++ A KVF+++ + DV +N++I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 88 RACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYF 147
V N L + VF+ M G+ D T + C L + +H++ K +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 148 GDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFD 207
+ N+L+D YSKCG + AK +F M +R +VS+ SMIAG + G EA +LF+
Sbjct: 329 REDRFCNTLLDMYSKCG--DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 208 EMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHRN----IVSWSTMVWGYSKDG 259
EM E D + +L+ A+ ++ + E I + I + ++ Y+K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 260 DMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQM-EEAGLKPDDGTLISIL 318
M+ A+L+F M K ++ W II GY++ A EA L++ + EE PD+ T+ +L
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 319 AACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLV 378
ACA G ++H I + + + +V N+LVDMYAKCG+L A +F+ + KDLV
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 379 SWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSM 438
SW M+ G MHG G++A+ LF++M+ G D+ +FV +L AC+H+G +D+G ++F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 439 ERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVEL 498
+ I P VEHY C++D+L R+G L +A R +++MP+ P+A IWG LL CR H+ V+L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 499 AEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDN 558
AE+V + + L+ + G Y +++NI+A W +V +R ++ + +K G S +E+
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746
Query: 559 EVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGHA 593
V+ F D +P++E I + + + G++
Sbjct: 747 RVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 781
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 260/565 (46%), Gaps = 48/565 (8%)
Query: 10 WFSKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAI 69
W R L LQ K+L K++ I D + KL C + A
Sbjct: 90 WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEAS 149
Query: 70 KVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKN 129
+VF++++ +N L+ ++ + + +F M GV D++T+ + K+ +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 130 WFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSM 189
H + +H I K G+ V NSL+ Y K V A+K+F M ERD++SWNS+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTERDVISWNSI 267
Query: 190 IAGLVKGGELSEARRLFDEM----PERDAVSWNTILDGYAKAGEMNLAFEL----FEKIP 241
I G V G + +F +M E D + ++ G A + ++L + +
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 242 HRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQ 301
R +T++ YSK GD++ AK +F M +++V +T +I+GYA +G+A EA +L+++
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 302 MEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGS 361
MEE G+ PD T+ ++L CA LL G +VH I + + V NAL+DMYAKCGS
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 362 LDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEG-FGPDKYTFVGVLC 420
+ A VF+ M KD++SWN ++ G + + +AL LF+ + +E F PD+ T VL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 421 ACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRL---------------- 464
AC DKG + + R+ G ++D+ + G L
Sbjct: 508 ACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 465 ---------------KEALRLVQSMP---VEPNAIIWGTLLGACRKHNAVELAEEVLDCL 506
KEA+ L M +E + I + +LL AC V+ + +
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 507 IRLKGSDPG--NYTMLSNIFAATGD 529
+P +Y + ++ A TGD
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGD 651
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 309/578 (53%), Gaps = 59/578 (10%)
Query: 23 NLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALC----RQMGLAIKVFNDIQDP 78
++ C+ + Q+ A IK RD A +++ A R + A K+FN +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR 88
Query: 79 DVHLYNTLIRACVQNSLNAQ--AFRVFLDM-QEKGVFTDNFTYPFLLKACNGKNWFHLVQ 135
+ +NT+IR ++ + A +F +M ++ V + FT+P +LKAC +
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 136 MIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVK 195
IH L K G+ GD FV ++L+ Y CG
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGF------------------------------ 178
Query: 196 GGELSEARRLF-DEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWG 254
+ +AR LF + E+D V + D + GE IV W+ M+ G
Sbjct: 179 ---MKDARVLFYKNIIEKDMV---VMTDRRKRDGE---------------IVLWNVMIDG 217
Query: 255 YSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTL 314
Y + GD + A++LFD+M +++V W +ISGY+ G K+A ++ +M++ ++P+ TL
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 315 ISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTK 374
+S+L A + G L LG +H + + + +AL+DMY+KCG ++ A+ VF + +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 375 KDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQY 434
+++++W+AM+ G A+HGQ A+ F +M+ G P ++ +L AC+H G +++G +Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 435 FYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHN 494
F M G+ P++EHYGCM+DLLGRSG L EA + +MP++P+ +IW LLGACR
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 495 AVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSV 554
VE+ + V + L+ + D G Y LSN++A+ G+W++V+ +RL+MK+ +K G S +
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 555 EVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
++D +HEF V D HPK+++I M+ + L+ G+
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 311/606 (51%), Gaps = 66/606 (10%)
Query: 50 YIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDM-QE 108
++ L++ + CR + A KVF+++ DV +N++I + + A +F M E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 109 KGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGV 168
G DN T +L C L + +H ++FV N L+D Y+KCG++
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM-- 280
Query: 169 SLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPER----DAVSWNTILDGY 224
A +F +M +D+VSWN+M+AG + G +A RLF++M E D V+W+ + GY
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 225 AKAG----EMNLAFELFEKIPHRNIVSWSTMVWG-------------------------- 254
A+ G + + ++ N V+ +++ G
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 255 ----------------YSKDGDMEMAKLLFDRMPAKT--LVPWTIIISGYAEKGMAKEAA 296
Y+K ++ A+ +FD + K +V WT++I GY++ G A +A
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 297 RLYDQM--EEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTN-----VC 349
L +M E+ +P+ T+ L ACA L +G ++HA Y + N V
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA----YALRNQQNAVPLFVS 516
Query: 350 NALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFG 409
N L+DMYAKCGS+ +A VF+ M K+ V+W +++ G MHG GE+ALG+F M+ GF
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 410 PDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALR 469
D T + VL AC+H+G ID+G++YF M+ +G+ P EHY C++DLLGR+GRL ALR
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 470 LVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGD 529
L++ MP+EP ++W L CR H VEL E + + L + G+YT+LSN++A G
Sbjct: 637 LIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGR 696
Query: 530 WNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLKP 589
W V +R M+ +K G S VE F V D+ HP +++IYQ++ + +K
Sbjct: 697 WKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKD 756
Query: 590 VGHAAK 595
+G+ +
Sbjct: 757 IGYVPE 762
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 266/563 (47%), Gaps = 66/563 (11%)
Query: 24 LHKCKNLNQTKQLFAQIIK---LDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDV 80
+HKCK ++Q K + +++ L L ++ IS L + L ++ F D V
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSL-LRRFPP-SDAGV 92
Query: 81 HLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHAL 140
+ +N+LIR+ N + +F M DN+T+PF+ KAC + + HAL
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 141 IYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELS 200
G+ ++FV N+L+ YS+C +S A+K+F M D+VSWNS+I K G+
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCR--SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 201 EARRLFDEMPE----------------------------------------RDAVSWNTI 220
A +F M ++ N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 221 LDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTL---- 276
+D YAK G M+ A +F + +++VSW+ MV GYS+ G E A LF++M + +
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 277 VPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHAS 336
V W+ ISGYA++G+ EA + QM +G+KP++ TLIS+L+ CA G L G ++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 337 INKYRFKCNTN-------VCNALVDMYAKCGSLDNAMSVFNGMTKK--DLVSWNAMLYGL 387
KY N V N L+DMYAKC +D A ++F+ ++ K D+V+W M+ G
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 388 AMHGQGEKALGLFSRMKDEGFG--PDKYTFVGVLCACTHAGFIDKGVQ-YFYSMERDYGI 444
+ HG KAL L S M +E P+ +T L AC + G Q + Y++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 445 LPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLD 504
+P C+ID+ + G + +A RLV + N + W +L+ H E A + D
Sbjct: 511 VPLFVS-NCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 505 CLIRLKGSDPGNYTMLSNIFAAT 527
+ R+ G T+L ++A +
Sbjct: 569 EMRRI-GFKLDGVTLLVVLYACS 590
>sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protein At3g21470
OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1
Length = 523
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 295/516 (57%), Gaps = 46/516 (8%)
Query: 79 DVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGK-NWFHLVQMI 137
+ H+ N LI+ + QA ++ ++ +GV+ + P +L+AC L +++
Sbjct: 11 EFHVSN-LIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLL 68
Query: 138 HALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGG 197
H+ K G D+ V +SLI Y KCG V VS A+K+F M ER++ +WN+MI G + G
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCV-VS-ARKVFDEMPERNVATWNAMIGGYMSNG 126
Query: 198 ELSEARRLFDEMPE-RDAVSWNTILDGYAKAGEMNLAFELFEK----------------- 239
+ A LF+E+ R+ V+W ++ GY K E+ A ELFE+
Sbjct: 127 DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGV 186
Query: 240 ----------------IPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIII 283
IP +N WS M+ GY + GD+ A+ +F R+ A+ LV W +I
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 284 SGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFK 343
+GYA+ G + +A + M+ G +PD T+ SIL+ACA+SG L +G +VH+ IN +
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 344 CNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRM 403
N V NAL+DMYAKCG L+NA SVF ++ + + N+M+ LA+HG+G++AL +FS M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 404 KDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGR 463
+ PD+ TF+ VL AC H GF+ +G++ F M + + P V+H+GC+I LLGRSG+
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGK 425
Query: 464 LKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYT----- 518
LKEA RLV+ M V+PN + G LLGAC+ H E+AE+V+ +I GS +Y+
Sbjct: 426 LKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLA 484
Query: 519 MLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSV 554
+SN++A T W +R++M+K +K G SS+
Sbjct: 485 SISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 68 AIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNG 127
A +F + D+ ++NTLI QN + A F +MQ +G D T +L AC
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 128 KNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWN 187
+ + +H+LI G + FV N+LID Y+KCG + A +F S+ R + N
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG--DLENATSVFESISVRSVACCN 344
Query: 188 SMIAGLVKGGELSEARRLFDEMP----ERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR 243
SMI+ L G+ EA +F M + D +++ +L G + ++F ++ +
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ 404
Query: 244 NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME 303
++ + + +I G KEA RL +M
Sbjct: 405 DV---------------------------KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 304 EAGLKPDDGTLISILAAC 321
+KP+D L ++L AC
Sbjct: 438 ---VKPNDTVLGALLGAC 452
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 298/562 (53%), Gaps = 73/562 (12%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
NL KQ +I L RD K I + + + A VF P+ +L+NT+IR
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 89 A-CVQNSLNAQ--AFRVFLDMQEKGVFTDNFTYPFLLKACNGKN--WFHLVQMIHALIYK 143
A + + NA A V+ + D FT+PF+LK + WF + IH +
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG--RQIHGQVVV 144
Query: 144 CGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEAR 203
G+ + V LI Y CG +G +AR
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLG---------------------------------DAR 171
Query: 204 RLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEM 263
++FDEM +D + W+ ++ GY K G+M+
Sbjct: 172 KMFDEMLVKD-------------------------------VNVWNALLAGYGKVGEMDE 200
Query: 264 AKLLFDRMP--AKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAAC 321
A+ L + MP + V WT +ISGYA+ G A EA ++ +M ++PD+ TL+++L+AC
Sbjct: 201 ARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSAC 260
Query: 322 AESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWN 381
A+ G L LG ++ + ++ ++ NA++DMYAK G++ A+ VF + ++++V+W
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWT 320
Query: 382 AMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERD 441
++ GLA HG G +AL +F+RM G P+ TF+ +L AC+H G++D G + F SM
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Query: 442 YGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEE 501
YGI P +EHYGCMIDLLGR+G+L+EA +++SMP + NA IWG+LL A H+ +EL E
Sbjct: 381 YGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGER 440
Query: 502 VLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVH 561
L LI+L+ ++ GNY +L+N+++ G W++ +R MK +K +G SS+EV+N V+
Sbjct: 441 ALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVY 500
Query: 562 EFSVCDQLHPKSEQIYQMINTL 583
+F D HP+ E+I++++ +
Sbjct: 501 KFISGDLTHPQVERIHEILQEM 522
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 302/572 (52%), Gaps = 10/572 (1%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
L + +QL A KL + I L++ A C + A+ F + + +V L+N ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 148
A +FR+F MQ + + + +TYP +LK C L + IH+ I K +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 149 DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 208
+ +V + LID Y+K G + A + + +D+VSW +MIAG + +A F +
Sbjct: 524 NAYVCSVLIDMYAKLG--KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 209 MPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS--------WSTMVWGYSKDGD 260
M +R S L A A + ++I + VS + +V YS+ G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 261 MEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAA 320
+E + L F++ A + W ++SG+ + G +EA R++ +M G+ ++ T S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 321 CAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSW 380
+E+ + G +VHA I K + T VCNAL+ MYAKCGS+ +A F ++ K+ VSW
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 381 NAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMER 440
NA++ + HG G +AL F +M P+ T VGVL AC+H G +DKG+ YF SM
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 441 DYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAE 500
+YG+ P+ EHY C++D+L R+G L A +Q MP++P+A++W TLL AC H +E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 501 EVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEV 560
L+ L+ D Y +LSN++A + W+ R +MK+ +K G S +EV N +
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSI 941
Query: 561 HEFSVCDQLHPKSEQIYQMINTLGKDLKPVGH 592
H F V DQ HP +++I++ L K +G+
Sbjct: 942 HSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 244/497 (49%), Gaps = 25/497 (5%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+L++ ++L +QI+KL L + ++ KL + A KVF+++ + + +N +I+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKN-WFHLVQMIHALIYKCGYF 147
+L + F +F+ M + V + T+ +L+AC G + F +V+ IHA I G
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 148 GDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFD 207
V N LID YS+ G V LA+++F + +D SW +MI+GL K +EA RLF
Sbjct: 220 DSTVVCNPLIDLYSRNGFV--DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 208 EM------PERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVS----WSTMVWGYSK 257
+M P A S ++L K + + +L + S + +V Y
Sbjct: 278 DMYVLGIMPTPYAFS--SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 258 DGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISI 317
G++ A+ +F M + V + +I+G ++ G ++A L+ +M GL+PD TL S+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 318 LAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDL 377
+ AC+ G L G ++HA K F N + AL+++YAKC ++ A+ F +++
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 378 VSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYS 437
V WN ML + + +F +M+ E P++YT+ +L C G ++ G Q
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 438 MERDYGILPQVEHYGC--MIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHN- 494
+ + Q+ Y C +ID+ + G+L A ++ + + + W T++ ++N
Sbjct: 516 IIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNF 571
Query: 495 ---AVELAEEVLDCLIR 508
A+ ++LD IR
Sbjct: 572 DDKALTTFRQMLDRGIR 588
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 234/512 (45%), Gaps = 17/512 (3%)
Query: 26 KCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNT 85
K ++L +QL ++KL D Y+ L+S + A +F+++ D YNT
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 86 LIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCG 145
LI Q +A +F M G+ D+ T L+ AC+ Q +HA K G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 146 YFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRL 205
+ + + +L++ Y+KC + +L F+ ++V WN M+ +L + R+
Sbjct: 420 FASNNKIEGALLNLYAKCADIETAL--DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 206 FDEMPERDAV----SWNTILDGYAKAGEMNLAFELFEKIPHRNI----VSWSTMVWGYSK 257
F +M + V ++ +IL + G++ L ++ +I N S ++ Y+K
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 258 DGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISI 317
G ++ A + R K +V WT +I+GY + +A + QM + G++ D+ L +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 318 LAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDL 377
++ACA L G ++HA F + NALV +Y++CG ++ + F D
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 378 VSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYS 437
++WNA++ G G E+AL +F RM EG + +TF + A + + +G Q ++
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ-VHA 716
Query: 438 MERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVE 497
+ G + E +I + + G + +A + + + N + W ++ A KH
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKHG--- 772
Query: 498 LAEEVLDCLIRLKGSD--PGNYTMLSNIFAAT 527
E LD ++ S+ P + T++ + A +
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 18/396 (4%)
Query: 106 MQEKGVFTDNFTYPFLLKACNGKNW-FHLVQMIHALIYKCGYFGDIFVPNSLIDSY-SKC 163
++ +G+ ++ T +LL+ C N + +H+ I K G + + L D Y K
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 164 GVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDG 223
+ G A K+F M ER I +WN MI L + E LF M + G
Sbjct: 135 DLYG---AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 224 YAKAGEM-NLAFELFEKIPHR--------NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAK 274
+A ++AF++ E+I R + V + ++ YS++G +++A+ +FD + K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 275 TLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVH 334
W +ISG ++ EA RL+ M G+ P S+L+AC + L +G ++H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 335 ASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGE 394
+ K F +T VCNALV +Y G+L +A +F+ M+++D V++N ++ GL+ G GE
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 395 KALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQ-YFYSMERDYGILPQVEHYGC 453
KA+ LF RM +G PD T ++ AC+ G + +G Q + Y+ + + ++E G
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GA 429
Query: 454 MIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGA 489
+++L + ++ AL VE N ++W +L A
Sbjct: 430 LLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 327/628 (52%), Gaps = 43/628 (6%)
Query: 12 SKRRLLEEKLQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKV 71
S + L++ ++N + K+ +Q KQL AQ I+ A +IS + + A+ +
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLL 61
Query: 72 FNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWF 131
F ++ P V + ++IR SL ++A F++M+ G D+ +P +LK+C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 132 HLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLA-KKLFMSMGERDIVSWNSMI 190
+ +H I + G D++ N+L++ Y+K +G ++ +F M +R S + +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 191 AG--LVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAG----------EMNL------ 232
+ + RR+F+ MP +D VS+NTI+ GYA++G EM
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 233 AFELFEKIP-----------------------HRNIVSWSTMVWGYSKDGDMEMAKLLFD 269
+F L +P ++ S++V Y+K +E ++ +F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 270 RMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGL 329
R+ + + W +++GY + G EA RL+ QM A +KP S++ ACA L L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 330 GMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAM 389
G ++H + + F N + +ALVDMY+KCG++ A +F+ M D VSW A++ G A+
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 390 HGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVE 449
HG G +A+ LF MK +G P++ FV VL AC+H G +D+ YF SM + YG+ ++E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 450 HYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRL 509
HY + DLLGR+G+L+EA + M VEP +W TLL +C H +ELAE+V + + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 510 KGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCDQL 569
+ G Y ++ N++A+ G W ++A +RL+M+K +K S +E+ N+ H F D+
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 570 HPKSEQIYQMINTLGKDLKPVGHAAKLS 597
HP ++I + + + + ++ G+ A S
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTS 629
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 311/608 (51%), Gaps = 79/608 (12%)
Query: 56 ISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDN 115
IS L+ ++ A K F+ +Q + +N+++ N L +A ++F +M E+ V + N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 116 FTYPFLLK---ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAK 172
+K +N F L+ + + + +++ Y + G+VG A+
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSW-----------TAMVKGYMQEGMVGE--AE 130
Query: 173 KLFMSMGERDIVSWN-------------------------------SMIAGLVKGGELSE 201
LF M ER+ VSW +MI GL + G + E
Sbjct: 131 SLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDE 190
Query: 202 ARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDM 261
AR +FDEM ER+ V+W T++ GY + +++A +LFE +P + VSW++M+ GY+ G +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 262 EMAKLLFDRMPAKTLV-------------------------------PWTIIISGYAEKG 290
E A+ F+ MP K ++ W +I Y KG
Sbjct: 251 EDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 291 MAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCN 350
EA L+ QM++ G++P +LISIL+ CA L G +VHA + + +F + V +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 351 ALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGP 410
L+ MY KCG L A VF+ + KD++ WN+++ G A HG GE+AL +F M G P
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 411 DKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRL 470
+K T + +L AC++AG +++G++ F SME + + P VEHY C +D+LGR+G++ +A+ L
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 471 VQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDW 530
++SM ++P+A +WG LLGAC+ H+ ++LAE L + + G Y +LS+I A+ W
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKW 550
Query: 531 NKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFSVCD-QLHPKSEQIYQMINTLGKDLKP 589
VA VR M+ K G S +EV +VH F+ + HP+ I M+ L+
Sbjct: 551 GDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLRE 610
Query: 590 VGHAAKLS 597
G++ S
Sbjct: 611 AGYSPDCS 618
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 29 NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 88
+L +Q+ A +++ D Y+A L++ C ++ A VF+ D+ ++N++I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 89 ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACN 126
+ L +A ++F +M G + T +L AC+
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 285/511 (55%), Gaps = 12/511 (2%)
Query: 83 YNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIY 142
+N +R SL +++ ++ M G D F++PF+LK+C + Q +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 143 KCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVS--WNSMIAGLVKGGELS 200
K G + FV +LI Y KCG+V + A+K+F + +S +N++I+G +++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLV--ADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 201 EARRLFDEMPERDAVSWNTILDGYAKAGEM--------NLAFELFEKIPHRNIVSWSTMV 252
+A +F M E + + G + +L + + + ++ +
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 253 WGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDG 312
Y K G +E + LFD MP K L+ W +ISGY++ G+A + LY+QM+ +G+ PD
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 313 TLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGM 372
TL+S+L++CA G +G +V + F N V NA + MYA+CG+L A +VF+ M
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 373 TKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGV 432
K LVSW AM+ MHG GE L LF M G PD FV VL AC+H+G DKG+
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 433 QYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRK 492
+ F +M+R+Y + P EHY C++DLLGR+GRL EA+ ++SMPVEP+ +WG LLGAC+
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 493 HNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGAS 552
H V++AE +I + ++ G Y ++SNI++ + + + +R+ M++ +K G S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 553 SVEVDNEVHEFSVCDQLHPKSEQIYQMINTL 583
VE VH F D+ H ++E++++M++ L
Sbjct: 499 YVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 192/407 (47%), Gaps = 19/407 (4%)
Query: 24 LHKCKNLN---QTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFND-IQDPD 79
L C +L+ +QL + K + +P++ LIS C + A KVF + Q
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 80 VHL-YNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIH 138
+ + YN LI NS A +F M+E GV D+ T L+ C + L + +H
Sbjct: 120 LSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179
Query: 139 ALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGE 198
K G ++ V NS I Y KCG V ++LF M + +++WN++I+G + G
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCG--SVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 199 LSEARRLFDEMPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPHR----NIVSWST 250
+ L+++M D + ++L A G + E+ + + N+ +
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 251 MVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPD 310
+ Y++ G++ A+ +FD MP K+LV WT +I Y GM + L+D M + G++PD
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 311 DGTLISILAACAESGLLGLGMKVHASINK-YRFKCNTNVCNALVDMYAKCGSLDNAMSVF 369
+ +L+AC+ SGL G+++ ++ + Y+ + + LVD+ + G LD AM
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 370 NGM-TKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTF 415
M + D W A+L +H + A F+++ + F P+ +
Sbjct: 418 ESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGY 462
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 9/249 (3%)
Query: 277 VPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHAS 336
PW + + A + + E+ LY M +G PD + IL +CA L G ++H
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 337 INKYRFKCNTNVCNALVDMYAKCGSLDNAMSVF--NGMTKKDLVSWNAMLYGLAMHGQGE 394
+ K + V AL+ MY KCG + +A VF N + + V +NA++ G + +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 395 KALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCM 454
A +F RMK+ G D T +G++ CT ++ G + + G+ +V
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG-RSLHGQCVKGGLDSEVAVLNSF 197
Query: 455 IDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSD- 513
I + + G ++ RL MPV+ I W ++ ++ LA +VL+ ++K S
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNG---LAYDVLELYEQMKSSGV 253
Query: 514 -PGNYTMLS 521
P +T++S
Sbjct: 254 CPDPFTLVS 262
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 301/548 (54%), Gaps = 18/548 (3%)
Query: 21 LQNLHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMG-LAIKVFNDIQDP- 78
L+ + +C +L KQ+ Q+I DL RD I K+++ L + + + I+
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVL 69
Query: 79 DVHLYNTLIRA---CVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQ 135
YNTL+ + C + + A++ F+ G D FT+P + KAC + +
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFV---SNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 136 MIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVK 195
IH ++ K G++ DI+V NSL+ Y CG A K+F M RD+VSW +I G +
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCG--ESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 196 GGELSEARRLFDEMP-ERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR-NIVSWST--- 250
G EA F +M E + ++ +L + G ++L + I R +++S T
Sbjct: 185 TGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 251 MVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME-EAGLKP 309
++ Y K + A +F + K V W +ISG +KEA L+ M+ +G+KP
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 310 DDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVF 369
D L S+L+ACA G + G VH I K +T++ A+VDMYAKCG ++ A+ +F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 370 NGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFID 429
NG+ K++ +WNA+L GLA+HG G ++L F M GF P+ TF+ L AC H G +D
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 430 KGVQYFYSME-RDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLG 488
+G +YF+ M+ R+Y + P++EHYGCMIDLL R+G L EAL LV++MPV+P+ I G +L
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 489 ACRKHNAV-ELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQK 547
AC+ + EL +E+LD + ++ D G Y +LSNIFAA W+ VA +R MK K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 548 PSGASSVE 555
G+S +E
Sbjct: 545 VPGSSYIE 552
>sp|P0C8Q5|PP336_ARATH Pentatricopeptide repeat-containing protein At4g22760
OS=Arabidopsis thaliana GN=PCMP-E6 PE=2 SV=1
Length = 578
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 310/580 (53%), Gaps = 46/580 (7%)
Query: 16 LLEEKLQN-LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLI-SSLALCRQMGLAI---- 69
+L+ KL+ L +C L Q KQ+ AQ++ + R ++ P L+ +L ++ I
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLV---VNRYNHLEPILVHQTLHFTKEFSRNIVTYV 57
Query: 70 -KVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGK 128
++ D + L+R Q+ + V++DM G+ + +L+AC
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 129 NWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNS 188
+ IHA K G G ++V L+ YS+ G + LAKK F + E++ VSWNS
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYI--ELAKKAFDDIAEKNTVSWNS 175
Query: 189 MIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHRNIVSW 248
++ G ++ GEL EARR+FD++PE+DAVSWN I+ YAK G+M A LF +P ++ SW
Sbjct: 176 LLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW 235
Query: 249 STMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYA--------------------- 287
+ ++ GY +M++A+ FD MP K V W +ISGY
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 288 ----------EKGMAKEAARLYDQMEEAG--LKPDDGTLISILAACAESGLLGLGMKVHA 335
+ G K+A +L+ QM E ++PD+ TL S+++A ++ G G V +
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 355
Query: 336 SINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEK 395
I ++ K + + +L+D+Y K G A +F+ + KKD VS++AM+ G ++G +
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 396 ALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGILPQVEHYGCMI 455
A LF+ M ++ P+ TF G+L A +H+G + +G + F SM +D+ + P +HYG M+
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMV 474
Query: 456 DLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLDCLIRLKGSDPG 515
D+LGR+GRL+EA L++SMP++PNA +WG LL A HN VE E ++L+ G
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTG 534
Query: 516 NYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVE 555
+ L+ I+++ G W+ VR +K+ + K G S VE
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 301/577 (52%), Gaps = 12/577 (2%)
Query: 34 KQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQN 93
K++ ++K D + L + A CRQ+ A KVF+ + + D+ +NT++ QN
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 94 SLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVP 153
+ A + M E+ + T +L A + + + IH + G+ + +
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 154 NSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERD 213
+L+D Y+KCG + A++LF M ER++VSWNSMI V+ EA +F +M +
Sbjct: 275 TALVDMYAKCG--SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 214 A----VSWNTILDGYAKAGEMNLAFELFEKIP-----HRNIVSWSTMVWGYSKDGDMEMA 264
VS L A G++ K+ RN+ ++++ Y K +++ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 265 KLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAES 324
+F ++ ++TLV W +I G+A+ G +A + QM +KPD T +S++ A AE
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 325 GLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAML 384
+ +H + + N V ALVDMYAKCG++ A +F+ M+++ + +WNAM+
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 385 YGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACTHAGFIDKGVQYFYSMERDYGI 444
G HG G+ AL LF M+ P+ TF+ V+ AC+H+G ++ G++ FY M+ +Y I
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Query: 445 LPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIWGTLLGACRKHNAVELAEEVLD 504
++HYG M+DLLGR+GRL EA + MPV+P ++G +LGAC+ H V AE+ +
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 631
Query: 505 CLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGASSVEVDNEVHEFS 564
L L D G + +L+NI+ A W KV VR+ M + +K G S VE+ NEVH F
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691
Query: 565 VCDQLHPKSEQIYQMINTLGKDLKPVGHAAKLSAEIG 601
HP S++IY + L +K G+ + +G
Sbjct: 692 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLG 728
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 275/600 (45%), Gaps = 57/600 (9%)
Query: 4 PIRAPTWFSKRRLLEEKLQN------LHKCKNLNQTKQLFAQIIKLDLQRDPYIAPKLIS 57
P R + S+R + + L +C +L + +Q+ + K L ++ + KL+S
Sbjct: 18 PSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVS 77
Query: 58 SLALCRQMGLAIKVFNDIQDPDVHLYNTLIRACVQNSLNAQAFRVFLDMQEKGVFTDNFT 117
+ A +VF I LY+T+++ + S +A + F+ M+ V +
Sbjct: 78 LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137
Query: 118 YPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMS 177
+ +LLK C + + + IH L+ K G+ D+F L + Y+KC V+ A+K+F
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR--QVNEARKVFDR 195
Query: 178 MGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDA----VSWNTILDGYAKAGEMNLA 233
M ERD+VSWN+++AG + G A + M E + ++ ++L + +++
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 234 FELF---EKIPHRNIVSWST-MVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEK 289
E+ + ++V+ ST +V Y+K G +E A+ LFD M + +V W +I Y +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 290 GMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVC 349
KEA ++ +M + G+KP D +++ L ACA+ G L G +H + N +V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 350 NALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFG 409
N+L+ MY KC +D A S+F + + LVSWNAM+ G A +G+ AL FS+M+
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 410 PDKYTFVGVLCACT------HAGFI---------DKGVQYFYSMERDYGIL--------- 445
PD +T+V V+ A HA +I DK V ++ Y
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 446 ------PQVEHYGCMIDLLGRSGRLKEALRLVQSM---PVEPNAIIWGTLLGACRKHNAV 496
V + MID G G K AL L + M ++PN + + +++ AC V
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 497 ELAEEVLDCLIRLKGS-----DPGNYTMLSNIFAATGDWNKVANVRLQMKKTRAQKPSGA 551
E L C +K + +Y + ++ G N+ + +QM A GA
Sbjct: 556 EAG---LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,459,708
Number of Sequences: 539616
Number of extensions: 9712774
Number of successful extensions: 31545
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 20964
Number of HSP's gapped (non-prelim): 2254
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)