Query 037406
Match_columns 162
No_of_seqs 209 out of 1281
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 20:26:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 99.5 3.3E-15 1.1E-19 137.8 1.8 79 5-87 204-282 (802)
2 1qg8_A Protein (spore coat pol 99.3 5.4E-12 1.8E-16 99.0 7.2 76 4-84 46-129 (255)
3 3bcv_A Putative glycosyltransf 99.2 2.1E-11 7.1E-16 94.6 7.5 76 3-84 49-124 (240)
4 2z86_A Chondroitin synthase; G 99.2 1.9E-11 6.4E-16 108.4 7.7 81 3-87 138-218 (625)
5 1xhb_A Polypeptide N-acetylgal 99.1 3.6E-10 1.2E-14 97.2 8.8 77 3-84 77-154 (472)
6 2z86_A Chondroitin synthase; G 99.1 4.2E-10 1.4E-14 99.7 9.4 81 3-88 419-499 (625)
7 2d7i_A Polypeptide N-acetylgal 99.0 3.1E-10 1.1E-14 100.8 7.7 79 3-86 160-238 (570)
8 2ffu_A Ppgalnact-2, polypeptid 98.9 2.2E-09 7.6E-14 93.2 7.1 72 9-85 116-187 (501)
9 3ckj_A Putative uncharacterize 98.9 6.2E-10 2.1E-14 92.1 2.2 59 21-83 113-172 (329)
10 3l7i_A Teichoic acid biosynthe 98.8 7.9E-10 2.7E-14 100.4 0.0 68 4-76 47-115 (729)
11 3f1y_A Mannosyl-3-phosphoglyce 98.7 1.9E-09 6.6E-14 92.1 1.7 57 21-81 161-218 (387)
12 4fix_A UDP-galactofuranosyl tr 98.7 1.3E-08 4.3E-13 92.3 4.9 72 11-84 237-309 (657)
13 2nxv_A ATP synthase subunits r 98.5 7.7E-08 2.6E-12 76.4 5.1 50 28-80 62-115 (249)
14 2bo4_A Mannosylglycerate synth 98.2 6.7E-06 2.3E-10 70.5 8.7 51 24-80 73-128 (397)
15 1fo8_A Alpha-1,3-mannosyl-glyc 97.1 0.00055 1.9E-08 57.6 5.8 47 30-79 89-138 (343)
16 2fy7_A Beta-1,4-galactosyltran 97.1 0.00052 1.8E-08 56.0 4.9 56 2-60 80-146 (287)
17 2wvl_A Mannosyl-3-phosphoglyce 96.2 0.015 5.1E-07 49.5 7.7 80 3-83 97-203 (391)
18 2zu9_A Mannosyl-3-phosphoglyce 94.6 0.077 2.6E-06 45.4 6.9 51 25-77 143-198 (394)
19 2c0n_A A197; thermophil protei 93.7 0.15 5.3E-06 39.7 6.4 68 6-81 18-89 (203)
20 3tqd_A 3-deoxy-manno-octuloson 90.4 0.79 2.7E-05 36.3 7.1 46 28-74 83-129 (256)
21 4fcu_A 3-deoxy-manno-octuloson 90.0 0.69 2.4E-05 36.5 6.4 44 30-73 77-121 (253)
22 2y6p_A 3-deoxy-manno-octuloson 89.4 2.1 7E-05 32.2 8.5 55 16-74 61-117 (234)
23 3k8d_A 3-deoxy-manno-octuloson 84.4 2.9 9.9E-05 33.1 7.0 44 25-69 89-133 (264)
24 4fce_A Bifunctional protein GL 84.3 4.2 0.00014 33.8 8.3 58 15-76 73-131 (459)
25 2v0h_A Bifunctional protein GL 83.5 6.3 0.00022 32.6 9.1 51 15-69 70-122 (456)
26 3d5n_A Q97W15_sulso; NESG, SSR 83.5 3.1 0.00011 30.9 6.5 49 15-68 61-112 (197)
27 3st8_A Bifunctional protein GL 83.1 6.8 0.00023 33.4 9.3 75 2-77 69-146 (501)
28 3juk_A UDP-glucose pyrophospho 82.9 1.5 5E-05 34.4 4.6 54 14-71 95-152 (281)
29 2wee_A MOBA-related protein; u 82.3 7.5 0.00026 28.1 8.1 57 15-74 68-126 (197)
30 1e5k_A Molybdopterin-guanine d 82.1 4.1 0.00014 30.4 6.7 37 28-67 79-116 (201)
31 3pnn_A Conserved domain protei 81.4 6.3 0.00021 31.4 8.0 52 13-69 74-140 (303)
32 2dpw_A Hypothetical protein TT 81.1 15 0.00052 27.7 9.8 68 1-74 34-114 (232)
33 3oam_A 3-deoxy-manno-octuloson 80.5 5.3 0.00018 30.9 7.0 50 28-78 76-127 (252)
34 3f1c_A Putative 2-C-methyl-D-e 80.2 5.4 0.00018 30.6 7.0 55 15-72 75-134 (246)
35 2e8b_A Probable molybdopterin- 75.6 7.1 0.00024 28.9 6.2 46 16-65 72-120 (201)
36 1hm9_A GLMU, UDP-N-acetylgluco 75.6 7.9 0.00027 32.3 7.1 55 15-71 75-130 (468)
37 1qwj_A Cytidine monophospho-N- 75.4 23 0.00078 26.5 9.2 42 29-72 82-124 (229)
38 2waw_A MOBA relate protein; un 75.3 20 0.00068 25.7 8.6 51 15-67 68-120 (199)
39 1i52_A 4-diphosphocytidyl-2-C- 74.0 19 0.00064 27.0 8.4 43 28-72 85-128 (236)
40 1h7e_A 3-deoxy-manno-octuloson 72.6 27 0.00094 26.0 9.7 53 15-71 63-117 (245)
41 1ezi_A CMP-N-acetylneuraminic 72.4 12 0.00041 27.9 6.9 42 28-70 82-124 (228)
42 3ngw_A Molybdopterin-guanine d 72.2 23 0.0008 26.6 8.5 55 15-74 59-115 (208)
43 2qh5_A PMI, ALGA, mannose-6-ph 72.2 27 0.00094 27.5 9.3 49 15-67 78-128 (308)
44 2ux8_A Glucose-1-phosphate uri 71.6 5 0.00017 31.6 4.7 55 13-71 105-161 (297)
45 2xwl_A 2-C-methyl-D-erythritol 70.9 28 0.00094 25.5 8.6 50 14-68 68-118 (223)
46 2vsh_A TARI, 2-C-methyl-D-eryt 68.8 16 0.00055 27.0 6.9 45 28-72 86-135 (236)
47 3lw6_A FI08434P, beta-4-galact 68.1 6.7 0.00023 32.0 4.7 45 15-60 85-130 (287)
48 1vgw_A 4-diphosphocytidyl-2C-m 67.0 19 0.00066 26.6 7.0 45 28-72 84-133 (231)
49 4ecm_A Glucose-1-phosphate thy 65.3 9.4 0.00032 29.6 5.1 52 14-70 97-148 (269)
50 2yc3_A 2-C-methyl-D-erythritol 64.5 23 0.0008 26.1 7.0 43 28-71 83-126 (228)
51 2e3d_A UTP--glucose-1-phosphat 64.2 9.3 0.00032 30.0 4.9 55 13-71 101-162 (302)
52 2px7_A 2-C-methyl-D-erythritol 64.1 14 0.00048 28.0 5.8 41 28-71 93-134 (236)
53 2pa4_A UTP-glucose-1-phosphate 62.7 8 0.00028 31.0 4.3 57 14-72 105-162 (323)
54 1w55_A ISPD/ISPF bifunctional 61.5 30 0.001 28.7 7.7 41 28-71 76-117 (371)
55 3q80_A 2-C-methyl-D-erythritol 60.7 25 0.00086 26.9 6.7 46 29-75 84-132 (231)
56 2xme_A CTP-inositol-1-phosphat 57.5 13 0.00043 27.9 4.4 50 13-67 81-131 (232)
57 1vic_A 3-deoxy-manno-octuloson 56.7 62 0.0021 24.5 8.8 55 15-70 62-118 (262)
58 1fxo_A Glucose-1-phosphate thy 53.3 21 0.0007 28.3 5.2 52 13-68 74-125 (293)
59 1vpa_A 2-C-methyl-D-erythritol 50.3 27 0.00091 25.9 5.2 43 28-71 91-135 (234)
60 1lvw_A Glucose-1-phosphate thy 47.7 33 0.0011 27.1 5.6 52 13-68 75-126 (295)
61 3rsb_A Adenosylcobinamide-phos 41.0 16 0.00056 26.4 2.6 37 30-70 82-119 (196)
62 1mc3_A Glucose-1-phosphate thy 36.7 28 0.00095 27.6 3.5 52 13-68 75-126 (296)
63 1djl_A Transhydrogenase DIII; 33.0 97 0.0033 23.9 5.8 71 2-86 65-135 (207)
64 2x65_A Mannose-1-phosphate gua 32.5 1.2E+02 0.0041 24.3 6.8 44 17-63 76-120 (336)
65 2fsv_C NAD(P) transhydrogenase 30.2 99 0.0034 23.8 5.4 71 2-86 66-136 (203)
66 1pno_A NAD(P) transhydrogenase 27.6 1.3E+02 0.0043 22.7 5.5 71 2-86 43-113 (180)
67 1d4o_A NADP(H) transhydrogenas 26.8 1.4E+02 0.0046 22.6 5.5 71 2-86 42-112 (184)
68 1use_A VAsp, vasodilator-stimu 25.3 83 0.0028 18.4 3.3 19 119-137 15-33 (45)
69 2j0a_A Beta-1,3-N-acetylglucos 24.6 36 0.0012 26.9 2.1 26 43-68 93-118 (280)
70 1s7j_A Phenazine biosynthesis 22.1 2E+02 0.0067 22.0 6.0 43 44-88 19-66 (262)
71 2ph1_A Nucleotide-binding prot 20.2 1.2E+02 0.0042 22.8 4.4 50 4-57 9-60 (262)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.50 E-value=3.3e-15 Score=137.76 Aligned_cols=79 Identities=32% Similarity=0.523 Sum_probs=69.3
Q ss_pred HHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecceeee
Q 037406 5 ECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWRFA 84 (162)
Q Consensus 5 ~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~~~ 84 (162)
.++++.++ .++++++++++.++|++|+|.|++.+ +||||+++|+|++++||+|++++..|++||++++|+++..+.
T Consensus 204 ~l~~~~~~-~~v~~i~~~~~~~GKa~alN~gl~~a---~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~ 279 (802)
T 4hg6_A 204 ELQQLCRE-LGVVYSTRERNEHAKAGNMSAALERL---KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFI 279 (802)
T ss_dssp HHHHHHHH-HTCEEEECSSCCSHHHHHHHHHHHHC---CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBS
T ss_pred HHHHHHHh-cCcEEEEecCCCCcchHHHHHHHHhc---CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEe
Confidence 34455443 46889998888677999999999999 999999999999999999999999998899999999998888
Q ss_pred cCC
Q 037406 85 KEA 87 (162)
Q Consensus 85 N~~ 87 (162)
|.+
T Consensus 280 ~~~ 282 (802)
T 4hg6_A 280 NPD 282 (802)
T ss_dssp SCC
T ss_pred CCc
Confidence 765
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.28 E-value=5.4e-12 Score=98.95 Aligned_cols=76 Identities=14% Similarity=0.211 Sum_probs=67.8
Q ss_pred HHHHHHHhcCCCEEEEEeC--------CCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeE
Q 037406 4 QECQRWAAKGINIRYESRE--------NRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIA 75 (162)
Q Consensus 4 ~~v~~l~~~~~~v~~i~~~--------~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg 75 (162)
++++++.+ ++++++++.+ .+.| +++|+|.|++.+ +||||+++|+|+.++|++|++++..|+.+|+++
T Consensus 46 ~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G-~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~ 120 (255)
T 1qg8_A 46 NVIRPFLN-DNRVRFYQSDISGVKERTEKTR-YAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRELDTHPEKA 120 (255)
T ss_dssp HHHGGGGG-STTEEEEECCCCSHHHHHSSCH-HHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCC
T ss_pred HHHHHHhh-cCCEEEEecccccccccccccC-HHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHHHHhCCCce
Confidence 45666655 7899999987 6777 899999999999 999999999999999999999999998899999
Q ss_pred EEecceeee
Q 037406 76 LVQARWRFA 84 (162)
Q Consensus 76 ~V~~~~~~~ 84 (162)
+|++.....
T Consensus 121 ~v~~~~~~~ 129 (255)
T 1qg8_A 121 VIYSASKTY 129 (255)
T ss_dssp EEEEEEEEE
T ss_pred EEEeceEEE
Confidence 999987665
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.22 E-value=2.1e-11 Score=94.61 Aligned_cols=76 Identities=22% Similarity=0.233 Sum_probs=61.2
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEeccee
Q 037406 3 EQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWR 82 (162)
Q Consensus 3 ~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~ 82 (162)
.++++++.++++++++++. ++.| +++|+|.|++.+ +||||+++|+|..++|++|++++..++. ++.++|.+...
T Consensus 49 ~~~~~~~~~~~~~i~~i~~-~n~G-~~~a~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~ 122 (240)
T 3bcv_A 49 PKICDDYAAQYPNIKVIHK-KNAG-LGMACNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLK 122 (240)
T ss_dssp HHHHHHHHHHCSSEEEEEC-CCCC-HHHHHHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC---
T ss_pred HHHHHHHHhhCCCEEEEEC-CCCC-hHHHHHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeE
Confidence 4678888888899999974 4667 899999999999 9999999999999999999999999954 45555655543
Q ss_pred ee
Q 037406 83 FA 84 (162)
Q Consensus 83 ~~ 84 (162)
..
T Consensus 123 ~~ 124 (240)
T 3bcv_A 123 RI 124 (240)
T ss_dssp --
T ss_pred EE
Confidence 33
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.21 E-value=1.9e-11 Score=108.44 Aligned_cols=81 Identities=21% Similarity=0.365 Sum_probs=67.0
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEeccee
Q 037406 3 EQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWR 82 (162)
Q Consensus 3 ~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~ 82 (162)
.++++++.. .+++++++.+++.++|++|+|.|++.+ +||||+++|+|..++|+||++++..|..+|.++++++...
T Consensus 138 ~~~~~~~~~-~~~i~~i~~~~~~~g~~~a~N~g~~~a---~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 213 (625)
T 2z86_A 138 EEIVREFES-LLNIKYVRQKDYGYQLCAVRNLGLRAA---KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKY 213 (625)
T ss_dssp HHHHHTTTT-TSCEEEEEECCCSCCHHHHHHHHHHHC---CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEE
T ss_pred HHHHHHhhh-cCCeEEEEeCCCCcchhHHHHHHHHhC---CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeee
Confidence 345555543 367999988765545999999999999 9999999999999999999999999988999999988765
Q ss_pred eecCC
Q 037406 83 FAKEA 87 (162)
Q Consensus 83 ~~N~~ 87 (162)
..+..
T Consensus 214 ~~~~~ 218 (625)
T 2z86_A 214 IDTSK 218 (625)
T ss_dssp ECCTT
T ss_pred ccCcc
Confidence 54443
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.06 E-value=3.6e-10 Score=97.17 Aligned_cols=77 Identities=12% Similarity=0.154 Sum_probs=66.7
Q ss_pred HHHHHHHHhcCC-CEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 3 EQECQRWAAKGI-NIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 3 ~~~v~~l~~~~~-~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
.++++++.++++ ++++++.++|.| +++|+|.|++.+ +||||+++|+|+.++|+||++++..++.+|.++++ +..
T Consensus 77 ~~~l~~~~~~~~~~v~vi~~~~n~G-~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~ 151 (472)
T 1xhb_A 77 KRPLESYVKKLKVPVHVIRMEQRSG-LIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PII 151 (472)
T ss_dssp THHHHHHHHSSSSCEEEEECSSCCC-HHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEE
T ss_pred HHHHHHHHHHCCCcEEEEECCCCCC-hHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eee
Confidence 457788888888 899999988888 899999999999 99999999999999999999999999888887755 433
Q ss_pred eee
Q 037406 82 RFA 84 (162)
Q Consensus 82 ~~~ 84 (162)
...
T Consensus 152 ~~~ 154 (472)
T 1xhb_A 152 DVI 154 (472)
T ss_dssp EEE
T ss_pred eeE
Confidence 333
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.06 E-value=4.2e-10 Score=99.75 Aligned_cols=81 Identities=20% Similarity=0.200 Sum_probs=70.9
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEeccee
Q 037406 3 EQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWR 82 (162)
Q Consensus 3 ~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~ 82 (162)
.++++++.++++++++++ +.+.| +++|+|.|++.+ +||||+++|+|.+++|++|++++..|..+|++++|.+...
T Consensus 419 ~~~~~~~~~~~~~i~~~~-~~n~G-~~~a~n~g~~~a---~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 493 (625)
T 2z86_A 419 LRILQEHYANHPRVRFIS-QKNKG-IGSASNTAVRLC---RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNR 493 (625)
T ss_dssp HHHHHHHHTTCTTEEEEE-ECCCC-HHHHHHHHHHHC---CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEE
T ss_pred HHHHHHHHhhCCcEEEEe-CCCCC-HHHHHHHHHHhc---CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeE
Confidence 357788877888999997 45667 899999999999 9999999999999999999999999988999999999876
Q ss_pred eecCCc
Q 037406 83 FAKEAK 88 (162)
Q Consensus 83 ~~N~~~ 88 (162)
..+.+.
T Consensus 494 ~~~~~~ 499 (625)
T 2z86_A 494 NIDREG 499 (625)
T ss_dssp EECTTS
T ss_pred EECCCC
Confidence 666543
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.04 E-value=3.1e-10 Score=100.76 Aligned_cols=79 Identities=11% Similarity=0.148 Sum_probs=68.2
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEeccee
Q 037406 3 EQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWR 82 (162)
Q Consensus 3 ~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~ 82 (162)
.++++++.+++++|++++.+++.| +++|+|.|++.+ +||||+++|+|+.++|+||++++..|..+|.+ +|++...
T Consensus 160 ~~~l~~~~~~~~~v~vi~~~~n~G-~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~ 234 (570)
T 2d7i_A 160 KKPLEDYMALFPSVRILRTKKREG-LIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMID 234 (570)
T ss_dssp THHHHHHHTTSTTEEEEECSSCCC-HHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEE
T ss_pred HHHHHHHHHhCCeEEEEECCCCCC-HHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeee
Confidence 467888888889999999888888 899999999999 99999999999999999999999999777766 5666555
Q ss_pred eecC
Q 037406 83 FAKE 86 (162)
Q Consensus 83 ~~N~ 86 (162)
+.+.
T Consensus 235 ~~~~ 238 (570)
T 2d7i_A 235 VIDH 238 (570)
T ss_dssp EECT
T ss_pred ccCC
Confidence 5544
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.89 E-value=2.2e-09 Score=93.19 Aligned_cols=72 Identities=11% Similarity=0.174 Sum_probs=61.5
Q ss_pred HHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecceeeec
Q 037406 9 WAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWRFAK 85 (162)
Q Consensus 9 l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~~~N 85 (162)
+.++++++++++.+++.| +++|+|.|++.+ +||||+++|+|.+++|+||++++..+..+|. ++|++.....+
T Consensus 116 ~~~~~~~v~vi~~~~n~G-~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~ 187 (501)
T 2ffu_A 116 LLGKIEKVRVLRNDRREG-LMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVIN 187 (501)
T ss_dssp GGGGBTTEEEEECSSCCH-HHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEEC
T ss_pred HHhcCCCEEEEECCCCcC-HHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCc
Confidence 345578999999888888 899999999999 9999999999999999999999999976665 57776654444
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.86 E-value=6.2e-10 Score=92.07 Aligned_cols=59 Identities=25% Similarity=0.323 Sum_probs=52.8
Q ss_pred eCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCCeEEEecceee
Q 037406 21 RENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQNSDIALVQARWRF 83 (162)
Q Consensus 21 ~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~dp~vg~V~~~~~~ 83 (162)
.+.|.| |++|+|.|++.+ +||||+++|+|.. ++|++|.+++..|.++|++++|+|....
T Consensus 113 ~~~n~G-~~~a~n~g~~~a---~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~ 172 (329)
T 3ckj_A 113 VPIRPG-KGEALWRSLAAS---RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRR 172 (329)
T ss_dssp SCCCCS-HHHHHHHHHHHC---CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEEC
T ss_pred CCCCCC-HHHHHHHHHHhC---CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecc
Confidence 455666 999999999999 9999999999999 8999999999997689999999997544
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.77 E-value=7.9e-10 Score=100.38 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=0.0
Q ss_pred HHHHHHHhc-CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEE
Q 037406 4 QECQRWAAK-GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIAL 76 (162)
Q Consensus 4 ~~v~~l~~~-~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~ 76 (162)
++++++.++ ++++++++.+.|.| +++|+|.|++.+ +||||+++|+|+.+.|++|++++..|. ++++.+
T Consensus 47 ~il~~~~~~~~~~i~~i~~~~n~G-~~~arN~gi~~A---~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~ 115 (729)
T 3l7i_A 47 KLMDEAIKDYDKNIRFIDLDENSG-HAHARNIALEEV---ETPYFMFLDADDELASYAITFYLEKFN-NTDGLI 115 (729)
T ss_dssp --------------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCCEEEEECCCCCC-HHHHHHHHHHhc---cCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEE
Confidence 566777666 46899999887878 799999999999 999999999999999999999999995 555433
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.74 E-value=1.9e-09 Score=92.05 Aligned_cols=57 Identities=19% Similarity=0.324 Sum_probs=51.9
Q ss_pred eCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCCeEEEecce
Q 037406 21 RENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 21 ~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
.+.|.| |++|+|.|++.+ +||||+++|+|.. ++|++|.+++..+..+|++++|.|..
T Consensus 161 ~~~n~G-~g~A~n~G~~~A---~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 161 YGDAHG-KGDAMWRALSVT---RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp GCSCCS-HHHHHHHHTTTC---CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred CCccCC-HHHHHHHHHHhc---CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 345667 999999999999 9999999999999 89999999999997889999999864
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.67 E-value=1.3e-08 Score=92.31 Aligned_cols=72 Identities=19% Similarity=0.293 Sum_probs=60.9
Q ss_pred hcCCCEEEEEeCCCCCChHHHHHHHHHhccCC-CccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecceeee
Q 037406 11 AKGINIRYESRENRTGYKAGALKEGLKRSYVK-HCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARWRFA 84 (162)
Q Consensus 11 ~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~-~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~~~~ 84 (162)
..++++++++.+ |.| .++|+|.|++.+... ++|||+++|+|+.++|++|++++..|+.+|++++|++.....
T Consensus 237 ~~~~~I~vI~~~-N~G-~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~ 309 (657)
T 4fix_A 237 RLGSRLSIHDQP-NLG-GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNL 309 (657)
T ss_dssp HHGGGEEEEECC-CCH-HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEET
T ss_pred hcCCCEEEEECC-CCC-HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecC
Confidence 346789999887 888 699999999988221 468999999999999999999999998899999999865443
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.53 E-value=7.7e-08 Score=76.43 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=45.8
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhc----CCCeEEEecc
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQ----NSDIALVQAR 80 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~----dp~vg~V~~~ 80 (162)
.+.|+|.|++.| +|||++++|+|+.++|+||++++..|+. +|++|+|++.
T Consensus 62 ~a~a~N~Gi~~A---~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~ 115 (249)
T 2nxv_A 62 GFSWHKQMLPRC---KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVA 115 (249)
T ss_dssp TTTHHHHHGGGC---CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESE
T ss_pred HHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeec
Confidence 688999999999 9999999999999999999999999965 4999988754
No 14
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.15 E-value=6.7e-06 Score=70.50 Aligned_cols=51 Identities=24% Similarity=0.437 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHH----HhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCCCeEEEecc
Q 037406 24 RTGYKAGALKEGL----KRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQNSDIALVQAR 80 (162)
Q Consensus 24 ~~G~KagAlN~gl----~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~dp~vg~V~~~ 80 (162)
+.| |.+|++.|+ +.+ +||+|+++|||.+ .+|+++.+++..+. ++.++|.+.
T Consensus 73 n~G-kG~Al~~G~~~Al~~a---~gd~vv~mDADlq~~~P~~i~~Ll~~l~--~g~D~V~g~ 128 (397)
T 2bo4_A 73 RPG-KGDGMNTALRYFLEET---QWERIHFYDADITSFGPDWITKAEEAAD--FGYGLVRHY 128 (397)
T ss_dssp SSS-HHHHHHHHHHHHHHHC---CCSEEEECCTTCSSCCHHHHHHHHHHHH--TTCSEEEEE
T ss_pred CCC-HHHHHHHHHHHHHHhC---CCCEEEEEcCCCCCCCHHHHHHHHHHHH--cCCCEEEEE
Confidence 566 999999999 777 9999999999997 79999999999983 357778774
No 15
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.15 E-value=0.00055 Score=57.56 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=39.0
Q ss_pred HHHHHHHHhccCCCccEEEEEcCCCCCChHHH---HHHHHHHhcCCCeEEEec
Q 037406 30 GALKEGLKRSYVKHCEYVAIFDVDFRLEPDYL---RRAIPYLVQNSDIALVQA 79 (162)
Q Consensus 30 gAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L---~~lv~~f~~dp~vg~V~~ 79 (162)
.++|.+++.+ ++++++++|.|+++.|||+ .++.+.++.||.+.+|++
T Consensus 89 ~al~~vf~~~---~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa 138 (343)
T 1fo8_A 89 WALGQIFHNF---NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSA 138 (343)
T ss_dssp HHHHHHHTTS---CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEES
T ss_pred HHHHHHHHhc---cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEec
Confidence 3677777766 8999999999999999998 556666678999999986
No 16
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=97.08 E-value=0.00052 Score=56.04 Aligned_cols=56 Identities=18% Similarity=0.134 Sum_probs=40.4
Q ss_pred HHHHHHHHH----hcCCC--EEEEEeCCCCCC-hHHHHHHHH----HhccCCCccEEEEEcCCCCCChHH
Q 037406 2 VEQECQRWA----AKGIN--IRYESRENRTGY-KAGALKEGL----KRSYVKHCEYVAIFDVDFRLEPDY 60 (162)
Q Consensus 2 i~~~v~~l~----~~~~~--v~~i~~~~~~G~-KagAlN~gl----~~a~~~~ge~i~i~DAD~~~~pd~ 60 (162)
++..++.+. +.+++ |.++......++ |+.++|.|+ +.+ +||||+++|+|+++.|++
T Consensus 80 L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~f~~a~a~N~G~~~al~~A---~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 80 LKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDY---DYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEECSSSCCCHHHHHHHHHHHHHHHS---CCCEEEEECTTEEESBTT
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeCCCCccchhhhhhhHHHHHHHhC---CCCEEEEECCCcccCCCc
Confidence 344555554 44554 444544434443 888999999 888 999999999999999996
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=96.17 E-value=0.015 Score=49.55 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=51.2
Q ss_pred HHHHHHHHh-cCCCEEEEEeCCCCC----------------------ChHHHHHHHHHhccCCCccEEEEEcCCCCCChH
Q 037406 3 EQECQRWAA-KGINIRYESRENRTG----------------------YKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPD 59 (162)
Q Consensus 3 ~~~v~~l~~-~~~~v~~i~~~~~~G----------------------~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd 59 (162)
.++|++|++ .+.++.++|.. ++| +|..++-.|+..|....++||.|+|||..++.+
T Consensus 97 ~dil~~~~~~~~~ri~viHQk-n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~ 175 (391)
T 2wvl_A 97 RDLLEEFAHLTERPALIFHQK-DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGA 175 (391)
T ss_dssp HHHHHHHHHHTTCCEEEEETT-CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHH
T ss_pred HHHHHHHHhhcccceEEEecc-ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccC
Confidence 568889988 57889999853 344 144444456666411269999999999999877
Q ss_pred HHHHHHHHHh----cCCCeEEEecceee
Q 037406 60 YLRRAIPYLV----QNSDIALVQARWRF 83 (162)
Q Consensus 60 ~L~~lv~~f~----~dp~vg~V~~~~~~ 83 (162)
..+.+-.+-. +.....+|--.|++
T Consensus 176 v~Eyvk~yaag~~~a~s~~~MVRI~wR~ 203 (391)
T 2wvl_A 176 VWEYVRAYAAGFLMAKTPFAMVRILWRY 203 (391)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEEEECCC
T ss_pred HHHHHHHHHHHhcccCCCcceEEEeccc
Confidence 7655433321 12557777333443
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.61 E-value=0.077 Score=45.39 Aligned_cols=51 Identities=24% Similarity=0.329 Sum_probs=38.5
Q ss_pred CCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhc-----CCCeEEE
Q 037406 25 TGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQ-----NSDIALV 77 (162)
Q Consensus 25 ~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~-----dp~vg~V 77 (162)
+| |..|+-.|+..+...++|+|+++|||. ..|..+.+++..+.. .+...+|
T Consensus 143 ~G-KG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~dmV 198 (394)
T 2zu9_A 143 SG-KGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEYTMV 198 (394)
T ss_dssp CS-HHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSSEEE
T ss_pred CC-hHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhccccccccccee
Confidence 46 999999999876333699999999999 678888777776632 2345566
No 19
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=93.73 E-value=0.15 Score=39.73 Aligned_cols=68 Identities=15% Similarity=0.098 Sum_probs=47.4
Q ss_pred HHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhcc-CCCccEEEEEcCC---CCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 6 CQRWAAKGINIRYESRENRTGYKAGALKEGLKRSY-VKHCEYVAIFDVD---FRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 6 v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~-~~~ge~i~i~DAD---~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
...+.+.+..+.+... ...-+-|+|..+.... ..++|+++++||| ...+|+.+.+++.. +..+|.|..
T Consensus 18 ~~~l~~~gi~~~l~~~---~SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~-----g~DVV~GsY 89 (203)
T 2c0n_A 18 IDFLVKNDIEYVILSR---RNHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE-----GYDVVCGYY 89 (203)
T ss_dssp HHHHHHTTCCEEEECC---CSCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHHH-----TCSEEEEEC
T ss_pred HHHHHhCCCeEEEEcc---ccchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHhC-----CCCEEEEEe
Confidence 3445556777777755 2336678888777622 3378999999999 99999999999832 444566543
No 20
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=90.42 E-value=0.79 Score=36.28 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=33.0
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCCe
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNSDI 74 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~v 74 (162)
.++ +..+++..-..+.|+++++++|. .++|+.+.+++..+..+|+.
T Consensus 83 t~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~ 129 (256)
T 3tqd_A 83 TER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNV 129 (256)
T ss_dssp HHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--
T ss_pred HHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCC
Confidence 444 66677764112478999999998 56899999999999655553
No 21
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=90.02 E-value=0.69 Score=36.54 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=33.8
Q ss_pred HHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCC
Q 037406 30 GALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNSD 73 (162)
Q Consensus 30 gAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~ 73 (162)
+++..+++..-....|+++++++|. .++|+.|.+++..+.++|+
T Consensus 77 ~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 121 (253)
T 4fcu_A 77 DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPN 121 (253)
T ss_dssp HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 4577777765111468999999998 6789999999999976654
No 22
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=89.45 E-value=2.1 Score=32.25 Aligned_cols=55 Identities=5% Similarity=-0.034 Sum_probs=38.5
Q ss_pred EEEEEeCC-CCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCCe
Q 037406 16 IRYESREN-RTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNSDI 74 (162)
Q Consensus 16 v~~i~~~~-~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~v 74 (162)
++++..+. ..++.++++ .+++.. ..|+++++++|. ..+|..+.+++..+..++.+
T Consensus 61 ~~~~~~~~~~~~g~~~~~-~~~~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~ 117 (234)
T 2y6p_A 61 CEVFLTPSDLPSGSDRVL-YVVRDL---DVDLIINYQGDEPFVYEEDIKLIFRELEKGERV 117 (234)
T ss_dssp SEEEECCTTCCSHHHHHH-HHHTTC---CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSE
T ss_pred eEEEECCcccccchHHHH-HHHHhC---CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCe
Confidence 44454432 234356666 467766 679999999999 78889999999988555443
No 23
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=84.45 E-value=2.9 Score=33.11 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=31.6
Q ss_pred CCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHh
Q 037406 25 TGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLV 69 (162)
Q Consensus 25 ~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~ 69 (162)
.++.++ +..+++.....+.|+++++++|. .+.|+.+++++..+.
T Consensus 89 ~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~ 133 (264)
T 3k8d_A 89 QSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLA 133 (264)
T ss_dssp CSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHH
T ss_pred CCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHh
Confidence 333444 66666553112579999999998 568999999999994
No 24
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=84.27 E-value=4.2 Score=33.81 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=41.7
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCCeEE
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNSDIAL 76 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~vg~ 76 (162)
+++++..+...| -++++-.|++.. +..|+++++++|. .+.++.+++++..+. +.+..+
T Consensus 73 ~~~~v~~~~~~g-~~~~i~~~~~~~--~~~~~~lv~~~D~P~i~~~~i~~l~~~~~-~~~~~~ 131 (459)
T 4fce_A 73 SLNWVLQAEQLG-TGHAMQQAAPHF--ADDEDILMLYGDVPLISVDTLQRLLAAKP-EGGIGL 131 (459)
T ss_dssp --CEEECSSCCC-HHHHHHHHGGGS--CTTSEEEEEETTCTTCCHHHHHHHHHHCC-TTSEEE
T ss_pred CcEEEeCCCCCC-cHHHHHHHHHhc--CCCCcEEEEeCCcccCCHHHHHHHHHHHh-hCCEEE
Confidence 466666555556 578899999886 1258999999998 578999999999884 334433
No 25
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=83.51 E-value=6.3 Score=32.64 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=39.3
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccCCC-ccEEEEEcCCC-CCChHHHHHHHHHHh
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYVKH-CEYVAIFDVDF-RLEPDYLRRAIPYLV 69 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~~~-ge~i~i~DAD~-~~~pd~L~~lv~~f~ 69 (162)
+++++..+...| -++++-.+++.. . .|+++++++|. .+.+..+++++..+.
T Consensus 70 ~~~~v~~~~~~g-~~~~~~~~~~~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 70 QVNWVLQTEQLG-TAHAVQQAAPFF---KDNENIVVLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp CCEEEECSCCCC-HHHHHHHHGGGC---CTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred CcEEEeCCCCCC-cHHHHHHHHHhc---CCCCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence 466665554456 577888888876 4 78999999998 468899999998874
No 26
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=83.48 E-value=3.1 Score=30.86 Aligned_cols=49 Identities=18% Similarity=0.112 Sum_probs=37.3
Q ss_pred CEEEEEeCCC-CCChHHHHHHHHHhccCCCc-cEEEEEcCCC-CCChHHHHHHHHHH
Q 037406 15 NIRYESRENR-TGYKAGALKEGLKRSYVKHC-EYVAIFDVDF-RLEPDYLRRAIPYL 68 (162)
Q Consensus 15 ~v~~i~~~~~-~G~KagAlN~gl~~a~~~~g-e~i~i~DAD~-~~~pd~L~~lv~~f 68 (162)
++ ++..+.. .| -++++..|++.+ .. |+++++++|. .++++.+++++..+
T Consensus 61 ~~-~v~~~~~~~G-~~~si~~al~~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 61 QI-VIYNPFWNEG-ISTSLKLGLRFF---KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SC-EEECTTGGGC-HHHHHHHHHHHT---TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CE-EEECCCCCCC-HHHHHHHHHHhh---ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 45 5544432 45 467888999887 44 8999999998 56899999999887
No 27
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=83.10 E-value=6.8 Score=33.40 Aligned_cols=75 Identities=17% Similarity=0.116 Sum_probs=48.9
Q ss_pred HHHHHHHHHh-cCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CCeEEE
Q 037406 2 VEQECQRWAA-KGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQN-SDIALV 77 (162)
Q Consensus 2 i~~~v~~l~~-~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d-p~vg~V 77 (162)
|++.+.++.+ .+.++.++..+...|. ++|+..+++.......+.++++..|. ...++.+..++...... ..+.+.
T Consensus 69 i~~~~~~~~~~~~~~i~~~~q~~~lGT-a~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~ 146 (501)
T 3st8_A 69 IAPLVGELADTLGRTIDVALQDRPLGT-GHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVL 146 (501)
T ss_dssp HHHHHHHHHHHHTSCCEEEECSSCCCH-HHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCCCCc-HHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEe
Confidence 3444544333 3678999988877884 99999999886222234555555554 67889999998876543 344443
No 28
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=82.87 E-value=1.5 Score=34.38 Aligned_cols=54 Identities=15% Similarity=0.069 Sum_probs=42.9
Q ss_pred CCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChH----HHHHHHHHHhcC
Q 037406 14 INIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPD----YLRRAIPYLVQN 71 (162)
Q Consensus 14 ~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd----~L~~lv~~f~~d 71 (162)
.++.++..+...| -++++..|++.. ..+.++++.+|....++ .+++++..+...
T Consensus 95 ~~i~~~~~~~~~G-t~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 95 CCFSYVRQKQMKG-LGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CEEEEEECSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH
T ss_pred ccEEEEecCCCCC-cHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHHc
Confidence 4566776655567 588999999887 56889999999988888 899999887543
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=82.26 E-value=7.5 Score=28.06 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=38.5
Q ss_pred CEEEEEeCCC-CCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcCCCe
Q 037406 15 NIRYESRENR-TGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNSDI 74 (162)
Q Consensus 15 ~v~~i~~~~~-~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~v 74 (162)
.++++..+.. .| -++++..|++.. ....++++++++|. .++++.+++++.. ..+..+
T Consensus 68 ~~~~~~~~~~~~g-~~~~i~~al~~~-~~~~~~vlv~~~D~P~~~~~~i~~l~~~-~~~~~i 126 (197)
T 2wee_A 68 GTDVVVVEDVERG-CAASLRVALARV-HPRATGIVLMLGDQPQVAPATLRRIIDV-GPATEI 126 (197)
T ss_dssp TSEEEECC----C-CHHHHHHHHTTS-CTTEEEEEEEETTCTTCCHHHHHHHHHH-GGGSSE
T ss_pred CCEEEECCCcccC-HHHHHHHHHHHh-cccCCeEEEEeCCcCCCCHHHHHHHHhh-cCCCCE
Confidence 3555544322 34 577888888875 22468999999998 5689999999987 443343
No 30
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=82.09 E-value=4.1 Score=30.42 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=32.8
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHH
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPY 67 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~ 67 (162)
-.+++..|++.. ..|+++++++|. .+.++.+++++..
T Consensus 79 ~~~si~~~l~~~---~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 79 PLAGMLSVMQQE---AGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp HHHHHHHHHHHC---CSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred HHHHHHHHHHhC---CCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 678899999988 789999999998 6789999999886
No 31
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=81.39 E-value=6.3 Score=31.42 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=38.5
Q ss_pred CCCEEEEEeC---------------CCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHh
Q 037406 13 GINIRYESRE---------------NRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLV 69 (162)
Q Consensus 13 ~~~v~~i~~~---------------~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~ 69 (162)
+.++.++..+ ...| -++|+-.+++.. +.++ +++.+|....++.+++++.++.
T Consensus 74 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~G-t~~al~~a~~~i---~~~~-lV~~gD~l~~~~~~~~l~~~~~ 140 (303)
T 3pnn_A 74 RIPVELVFQELDRLPEGFSCPEGREKPWG-TNHAVLMGRDAI---REPF-AVINADDFYGRNGFEVLARKLM 140 (303)
T ss_dssp TSCEEEEECCTTCCCTTCCCCTTCCSCCC-HHHHHHTTTTTC---CSCE-EEEESSCBCCHHHHHHHHHHHH
T ss_pred CCcEEEEecccccccccccccccccccCC-cHHHHHHHHHhc---CCCE-EEEECCeecCHHHHHHHHHHHH
Confidence 4567777655 3456 578888888776 5555 5567999999999999999884
No 32
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=81.13 E-value=15 Score=27.66 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=45.1
Q ss_pred CHHHHHHHHHhcCCCEEEEEe------------CCCCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHH
Q 037406 1 MVEQECQRWAAKGINIRYESR------------ENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPY 67 (162)
Q Consensus 1 ~i~~~v~~l~~~~~~v~~i~~------------~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~ 67 (162)
||+..++.+.+.+.++.++.. +...| -++++..|++.. + +.++++++|.. +.++.+++++.
T Consensus 34 ll~~~l~~l~~~~~~ivvv~~~~~i~~~~~~~~~~~~g-~~~~i~~a~~~~---~-~~~lv~~~D~P~~~~~~i~~l~~- 107 (232)
T 2dpw_A 34 MVEWVLEALYAAGLSPVYVGENPGLVPAPALTLPDRGG-LLENLEQALEHV---E-GRVLVATGDIPHLTEEAVRFVLD- 107 (232)
T ss_dssp THHHHHHHHHHTTCEEEEESCCSSCSSCCSEEECCCSS-HHHHHHHHHHTC---C-SEEEEEETTCTTCCHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCCEEEEEeChHHHhhhcCeEecCCCC-HHHHHHHHHHHc---C-CCEEEEeCCcccCCHHHHHHHHh-
Confidence 456666776664433333311 11234 577888999887 5 89999999985 68999999998
Q ss_pred HhcCCCe
Q 037406 68 LVQNSDI 74 (162)
Q Consensus 68 f~~dp~v 74 (162)
+..+..+
T Consensus 108 ~~~~~~~ 114 (232)
T 2dpw_A 108 KAPEAAL 114 (232)
T ss_dssp HCCSCSE
T ss_pred cCCCCCE
Confidence 5333344
No 33
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=80.50 E-value=5.3 Score=30.89 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=33.3
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC-CCeEEEe
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQN-SDIALVQ 78 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d-p~vg~V~ 78 (162)
-++ +-.+++..-....|+++++++|. .++++.|++++..+..+ .++....
T Consensus 76 t~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~ 127 (252)
T 3oam_A 76 TER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLA 127 (252)
T ss_dssp HHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEE
T ss_pred HHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEe
Confidence 455 44555543012468999999998 57899999999998543 2344433
No 34
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=80.25 E-value=5.4 Score=30.62 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=38.2
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccC----CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYV----KHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNS 72 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~----~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp 72 (162)
.+.++.. ..+ ..+++-.|++.... ...+++++.|+|. .++++.+++++..+..++
T Consensus 75 ~~~~~~~--~~~-~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~ 134 (246)
T 3f1c_A 75 RIVVIEG--GED-RNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG 134 (246)
T ss_dssp TEEEEEC--CSS-HHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS
T ss_pred CEEEECC--CCc-hHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC
Confidence 4555532 223 46677778876511 1368999999996 678999999999986543
No 35
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=75.63 E-value=7.1 Score=28.95 Aligned_cols=46 Identities=15% Similarity=0.070 Sum_probs=34.8
Q ss_pred EEEEEeCC-CCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHH-HH
Q 037406 16 IRYESREN-RTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRR-AI 65 (162)
Q Consensus 16 v~~i~~~~-~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~-lv 65 (162)
++++..+. ..| -.+++..|++.. +.+.++++.+|.. ++++.+++ ++
T Consensus 72 ~~~v~~~~~~~g-~~~~i~~al~~~---~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 72 APVVLDEFEESA-SIIGLYTALKHA---KEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCEEECCCSSCC-HHHHHHHHHHHC---SSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred ceEEecCCCCCC-cHHHHHHHHHHc---CCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 44454332 234 678899999987 7899999999985 48999998 87
No 36
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=75.55 E-value=7.9 Score=32.28 Aligned_cols=55 Identities=9% Similarity=0.111 Sum_probs=40.1
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQN 71 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~d 71 (162)
++.++..+...| -++++-.|++.. ....|+++++++|.. +.++.+++++..+...
T Consensus 75 ~i~~v~~~~~~G-~~~sl~~a~~~~-~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 75 QTEFVTQSEQLG-TGHAVMMTEPIL-EGLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp SSEEEECSSCCC-HHHHHHTTHHHH-TTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred CcEEEeCCccCC-hHHHHHHHHHHh-ccCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 456665444456 578888888876 222689999999985 6889999999887543
No 37
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=75.43 E-value=23 Score=26.55 Aligned_cols=42 Identities=17% Similarity=0.208 Sum_probs=32.3
Q ss_pred HHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCC
Q 037406 29 AGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQNS 72 (162)
Q Consensus 29 agAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~dp 72 (162)
.+++..|++.. ...|+++++++|.- +.|+.+.+++..+..++
T Consensus 82 ~~~v~~al~~~--~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~ 124 (229)
T 1qwj_A 82 LDAIVEFLNYH--NEVDIVGNIQATSPCLHPTDLQKVAEMIREEG 124 (229)
T ss_dssp HHHHHHHHTTC--TTCSEEEEECTTCTTCCHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhc--CCCCEEEEecCCCCcCCHHHHHHHHHHHHhCC
Confidence 35677778764 24789999999985 58999999999885443
No 38
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=75.33 E-value=20 Score=25.68 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=36.4
Q ss_pred CEEEEEeCCC-CCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHH
Q 037406 15 NIRYESRENR-TGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPY 67 (162)
Q Consensus 15 ~v~~i~~~~~-~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~ 67 (162)
.++++..+.. .| -.+++..|++.. ....++++++++|.. ++++.+++++..
T Consensus 68 ~~~~~~~~~~~~g-~~~~i~~al~~~-~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 68 GLDIVLVDDAGLG-CSSSLKSALTWV-DPTAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp TSEEEECCCCCTT-CCCHHHHHHHTS-CTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCEEEECCCcccC-HHHHHHHHHHhh-hccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 3555543322 34 466888999875 224689999999987 488999999987
No 39
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=73.98 E-value=19 Score=26.96 Aligned_cols=43 Identities=23% Similarity=0.345 Sum_probs=33.8
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcCC
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQNS 72 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~dp 72 (162)
..+++-.|++.. +..|+++++++|.. ++++.+++++..+..++
T Consensus 85 ~~~~i~~al~~~--~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 85 RADSVLAGLKAA--GDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp HHHHHHHHHHTS--TTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred HHHHHHHHHHhc--CCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 567788888876 13689999999974 68999999999885443
No 40
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=72.57 E-value=27 Score=26.05 Aligned_cols=53 Identities=6% Similarity=0.035 Sum_probs=36.6
Q ss_pred CEEEEEeC-CCCCChHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhcC
Q 037406 15 NIRYESRE-NRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQN 71 (162)
Q Consensus 15 ~v~~i~~~-~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~d 71 (162)
+++++..+ ...++-++++ .+++.. ..|+++++++|.. +.++.+.+++..+..+
T Consensus 63 ~~~~~~~~~~~~~g~~~~~-~~~~~~---~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 63 GGKAIMTRNDHESGTDRLV-EVMHKV---EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp TCEEEECCSCCSSHHHHHH-HHHHHS---CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCeEEeCCCccCCcHHHHH-HHHHhC---CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 35666553 2233245544 556665 6799999999985 5899999999988554
No 41
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=72.37 E-value=12 Score=27.92 Aligned_cols=42 Identities=10% Similarity=0.079 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCCC-CChHHHHHHHHHHhc
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDFR-LEPDYLRRAIPYLVQ 70 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~~-~~pd~L~~lv~~f~~ 70 (162)
...++-.|++.+ ....|+++++++|.. +.++.+.+++..+..
T Consensus 82 ~~~sv~~~l~~~-~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 82 SISGVIHALETI-GSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp HHHHHHHHHHHH-TCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred hHHHHHHHHHHh-CCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 466788888875 224689999999984 689999999988743
No 42
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=72.23 E-value=23 Score=26.56 Aligned_cols=55 Identities=11% Similarity=0.124 Sum_probs=38.1
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhc-CCCe
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQ-NSDI 74 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~-dp~v 74 (162)
.++++..+....+-.+++-.|++.+ .+++ ++++|. .++|+.+++++..+.. +.++
T Consensus 59 ~~~~v~d~~~~~G~~~si~~gl~~~----~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~ 115 (208)
T 3ngw_A 59 EAEFIWDLHKGVGSIAGIHAALRHF----GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDA 115 (208)
T ss_dssp CSCEECCTTCCCSHHHHHHHHHHHH----SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSE
T ss_pred CCeEEecCCCCCChHHHHHHHHHHc----CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCE
Confidence 3555543322222567888888875 4889 999997 4589999999999843 3443
No 43
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=72.17 E-value=27 Score=27.55 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=37.7
Q ss_pred CEEEEEeCCCCCChHHHHHHHHHhccCCC-ccEEEEEcCCCCC-ChHHHHHHHHH
Q 037406 15 NIRYESRENRTGYKAGALKEGLKRSYVKH-CEYVAIFDVDFRL-EPDYLRRAIPY 67 (162)
Q Consensus 15 ~v~~i~~~~~~G~KagAlN~gl~~a~~~~-ge~i~i~DAD~~~-~pd~L~~lv~~ 67 (162)
++.++..+...| -++++-.++... . .++++++.+|... +++.+.+++..
T Consensus 78 ~~~~i~~~~~~g-t~~al~~a~~~l---~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 78 SVGFLLESLSKN-TANAIALSALMS---DKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp EEEEEEESSCCC-HHHHHHHHHHTS---CTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred ccEEEeCCCCCC-hHHHHHHHHHHh---CCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 566776555566 588888888775 4 4589999999988 78888888875
No 44
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=71.65 E-value=5 Score=31.61 Aligned_cols=55 Identities=18% Similarity=0.073 Sum_probs=42.6
Q ss_pred CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCC--hHHHHHHHHHHhcC
Q 037406 13 GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLE--PDYLRRAIPYLVQN 71 (162)
Q Consensus 13 ~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~--pd~L~~lv~~f~~d 71 (162)
+.++.++..+...| -++++-.|++.. ..+.++++.+|.... |..+++++..+...
T Consensus 105 g~~i~~~~~~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 105 PGNIAYVRQQEPMG-LGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp TTSEEEEECCSCCC-HHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCC-hHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 34677776555567 578888888886 568899999999887 68899999887543
No 45
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=70.92 E-value=28 Score=25.51 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=37.1
Q ss_pred CCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHH
Q 037406 14 INIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYL 68 (162)
Q Consensus 14 ~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f 68 (162)
.++.++.. ..+ ...++..|++.. ...++++++++|. .++++.+++++..+
T Consensus 68 ~~v~~~~~--~~~-~~~~i~~al~~~--~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 68 EDSVIVSG--GVD-RTESVALALEAA--GDAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp TTEEEEEC--CSS-HHHHHHHHHTTC--TTCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCeEEEcC--CCC-HHHHHHHHHHhc--CCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 45666542 233 567788888775 2468999999998 56889999999987
No 46
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=68.81 E-value=16 Score=27.04 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=33.5
Q ss_pred hHHHHHHHHHhccC--C--CccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 037406 28 KAGALKEGLKRSYV--K--HCEYVAIFDVDF-RLEPDYLRRAIPYLVQNS 72 (162)
Q Consensus 28 KagAlN~gl~~a~~--~--~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp 72 (162)
...++-.|++.+.. . ..++++++++|. .+.++.+++++..+..++
T Consensus 86 ~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2vsh_A 86 RNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHD 135 (236)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 46677777776410 2 348999999998 678999999999885443
No 47
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=68.10 E-value=6.7 Score=32.02 Aligned_cols=45 Identities=22% Similarity=0.347 Sum_probs=33.9
Q ss_pred CEEEEEeCCCCCC-hHHHHHHHHHhccCCCccEEEEEcCCCCCChHH
Q 037406 15 NIRYESRENRTGY-KAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDY 60 (162)
Q Consensus 15 ~v~~i~~~~~~G~-KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~ 60 (162)
.|-++....+.-| ++..+|.|...| .+..|++++-|.|.+|..|.
T Consensus 85 ~I~VieQ~~~~~FNRa~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~ 130 (287)
T 3lw6_A 85 HIFVLNQVDRFRFNRASLINVGFQFA-SDVYDYIAMHDVDLLPLNDN 130 (287)
T ss_dssp EEEEEEECSSSCCCHHHHHHHHHHHS-CTTCCEEEEECTTEEECCTT
T ss_pred EEEEEecCCCCccchhheecccHHHH-hccCCEEEEecccccccCCC
Confidence 4555655543333 888999999887 45689999999999997664
No 48
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=66.96 E-value=19 Score=26.60 Aligned_cols=45 Identities=16% Similarity=0.238 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhccC----CCccEEEEEcCCC-CCChHHHHHHHHHHhcCC
Q 037406 28 KAGALKEGLKRSYV----KHCEYVAIFDVDF-RLEPDYLRRAIPYLVQNS 72 (162)
Q Consensus 28 KagAlN~gl~~a~~----~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp 72 (162)
..+++-.|++.... ...++++++++|. .++++.+.+++..+..++
T Consensus 84 ~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 84 RAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp HHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 56778888876411 0358999999997 458999999999885443
No 49
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=65.28 E-value=9.4 Score=29.56 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=37.8
Q ss_pred CCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhc
Q 037406 14 INIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQ 70 (162)
Q Consensus 14 ~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~ 70 (162)
.++.++..+...| -++++..+++.. ..+.++++.+|.... .-+.+++..+..
T Consensus 97 ~~i~~~~~~~~~G-~~~al~~a~~~~---~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 97 VSFTYRVQDKAGG-IAQALGLCEDFV---GNDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp CEEEEEECSSCCC-HHHHHHTTHHHH---TTSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred ceEEEeeCCccCc-HHHHHHHHHHhc---CCCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 3566665544456 578898888887 678999999999776 557777777743
No 50
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=64.51 E-value=23 Score=26.14 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=33.7
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQN 71 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d 71 (162)
..+++-.|++.. ....+++++.|+|. .+.++.+++++..+...
T Consensus 83 ~~~sv~~al~~~-~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 83 RQDSVYSGLQEI-DVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp HHHHHHHHHTTS-CTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-ccCCCEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 567888888875 22358999999996 67899999999988443
No 51
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=64.21 E-value=9.3 Score=30.03 Aligned_cols=55 Identities=18% Similarity=0.028 Sum_probs=40.7
Q ss_pred CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCC----hH---HHHHHHHHHhcC
Q 037406 13 GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLE----PD---YLRRAIPYLVQN 71 (162)
Q Consensus 13 ~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~----pd---~L~~lv~~f~~d 71 (162)
+.++.++..+...| -++++-.+++.. ..+.++++.+|.... +. .+++++..+...
T Consensus 101 ~~~i~~~~~~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 101 HVTIMQVRQGLAKG-LGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp TCEEEEEECSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred CcceEEeeCCccCC-HHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 34566666555567 588899998886 567899999998886 45 688988877443
No 52
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=64.06 E-value=14 Score=28.01 Aligned_cols=41 Identities=12% Similarity=0.153 Sum_probs=34.3
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQN 71 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d 71 (162)
..+++-.|++.+ ..++++++++|. .++++.+++++..+...
T Consensus 93 ~~~~i~~al~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 93 RQASVARLLEAA---SLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp HHHHHHHHHHHC---CSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHc---CCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 567888899887 689999999996 56899999999987443
No 53
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=62.71 E-value=8 Score=30.98 Aligned_cols=57 Identities=12% Similarity=-0.007 Sum_probs=40.7
Q ss_pred CCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCC-hHHHHHHHHHHhcCC
Q 037406 14 INIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLE-PDYLRRAIPYLVQNS 72 (162)
Q Consensus 14 ~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~-pd~L~~lv~~f~~dp 72 (162)
.++.++..+...| -++++-.++... ....|+++++.+|.... |..+++++..+..+.
T Consensus 105 ~~i~~~~~~~~~G-t~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~ 162 (323)
T 2pa4_A 105 IKAVPVTQDKPLG-LGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFG 162 (323)
T ss_dssp CEEEEEECSSCCC-HHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTTC
T ss_pred cceEEEeCCccCC-cHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhcC
Confidence 4576776555566 578888888775 22335689999999886 688999999885443
No 54
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=61.48 E-value=30 Score=28.74 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=34.2
Q ss_pred hHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 037406 28 KAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQN 71 (162)
Q Consensus 28 KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d 71 (162)
...++-.|++.. ..|+++++++|. .++++.+++++..+..+
T Consensus 76 ~~~sv~~aL~~l---~~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 76 RAESLKKALELI---DSEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp HHHHHHHHHTTC---CSSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred hHHHHHHHHHhc---CCCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 457788899887 689999999998 56899999999988544
No 55
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=60.74 E-value=25 Score=26.93 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=33.7
Q ss_pred HHHHHHHHHhccCCC--ccEEEEEcCCC-CCChHHHHHHHHHHhcCCCeE
Q 037406 29 AGALKEGLKRSYVKH--CEYVAIFDVDF-RLEPDYLRRAIPYLVQNSDIA 75 (162)
Q Consensus 29 agAlN~gl~~a~~~~--ge~i~i~DAD~-~~~pd~L~~lv~~f~~dp~vg 75 (162)
..++-.|++.+ ... .+++++.|+|. .++|+.+++++..+..+.+..
T Consensus 84 ~~sv~~gl~~~-~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~~~ 132 (231)
T 3q80_A 84 TDTVNLALTVL-SGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAV 132 (231)
T ss_dssp HHHHHHHHGGG-C---CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHh-hhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCCeE
Confidence 56777888876 211 58999999995 558999999999985423433
No 56
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=57.46 E-value=13 Score=27.90 Aligned_cols=50 Identities=12% Similarity=0.183 Sum_probs=35.7
Q ss_pred CCCEEEEEeCCC-CCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHH
Q 037406 13 GINIRYESRENR-TGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPY 67 (162)
Q Consensus 13 ~~~v~~i~~~~~-~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~ 67 (162)
+.+++++..+.. .| -++++..|++.. + +.++++.+|...+++.+++++..
T Consensus 81 ~~~~~~v~~~~~~~g-~~~~i~~a~~~~---~-~~~lv~~~D~p~~~~~~~~l~~~ 131 (232)
T 2xme_A 81 GFNYKIVRHDRPEKG-NGYSLLVAKNHV---E-DRFILTMGDHVYSQQFIEKAVRG 131 (232)
T ss_dssp CCCEEEEECSCGGGC-HHHHHHTTGGGC---C-SSEEEEETTEEECHHHHHHHTTC
T ss_pred CCcEEEEECCCCCCC-cHHHHHHHHHHC---C-CCEEEEcCCcccCHHHHHHHHhC
Confidence 346777765433 45 477888888886 5 44567889988899999888764
No 57
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=56.65 E-value=62 Score=24.51 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=34.6
Q ss_pred CEEEEEeC-CCCCChHHHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 037406 15 NIRYESRE-NRTGYKAGALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQ 70 (162)
Q Consensus 15 ~v~~i~~~-~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~ 70 (162)
.+.++.++ ...++.+ .+..+++.......++++++++|. .+.++.+.+++..+..
T Consensus 62 ~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 62 GAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TCEEEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 35556543 2233333 344455443111468999999998 4688999999998754
No 58
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=53.27 E-value=21 Score=28.26 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=33.6
Q ss_pred CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 037406 13 GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYL 68 (162)
Q Consensus 13 ~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f 68 (162)
+.++.++..+...| -++++-.|++.. ..+-++++-+|..+.+.-+.+++..+
T Consensus 74 g~~i~~~~~~~~~G-~~~al~~a~~~i---~~~~~~lv~gD~~~~~~~l~~~l~~~ 125 (293)
T 1fxo_A 74 GLDLQYAVQPSPDG-LAQAFLIGESFI---GNDLSALVLGDNLYYGHDFHELLGSA 125 (293)
T ss_dssp TCEEEEEECSSCCC-GGGHHHHTHHHH---TTSEEEEEETTEEEECTTHHHHHHHH
T ss_pred CceEEEeeCCCCCC-HHHHHHHHHHHh---CCCCEEEEECChhccCccHHHHHHHH
Confidence 34566666555556 577888888876 44444444499876445577777766
No 59
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=50.29 E-value=27 Score=25.91 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhccCC-CccEEEEEcCCC-CCChHHHHHHHHHHhcC
Q 037406 28 KAGALKEGLKRSYVK-HCEYVAIFDVDF-RLEPDYLRRAIPYLVQN 71 (162)
Q Consensus 28 KagAlN~gl~~a~~~-~ge~i~i~DAD~-~~~pd~L~~lv~~f~~d 71 (162)
...++-.|++.+ .+ ..++++++++|. .++++.+.+++..+..+
T Consensus 91 ~~~sv~~al~~~-~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 91 RSQSVRSALEFL-EKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp HHHHHHHHHHHH-GGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hhcCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 344577777764 21 358999999998 57899999999987443
No 60
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=47.74 E-value=33 Score=27.14 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=34.2
Q ss_pred CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 037406 13 GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYL 68 (162)
Q Consensus 13 ~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f 68 (162)
+.++.++..+...| -++++-.|++.. . +.+++++. +|..+.+.-+.+++..+
T Consensus 75 g~~i~~~~~~~~~G-~~~al~~a~~~i-~-~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (295)
T 1lvw_A 75 GVRFSYRVQEEPRG-IADAFIVGKDFI-G-DSKVALVL-GDNVFYGHRFSEILRRA 126 (295)
T ss_dssp TSEEEEEECSSCCC-GGGHHHHTHHHH-T-TSCEEEEE-TTCCEECTTHHHHHHHH
T ss_pred CceEEEeeCCCCCC-hHHHHHHHHHHh-C-CCcEEEEE-CCccccCcCHHHHHHHH
Confidence 44566666555456 577888888876 1 34566666 99876445567777766
No 61
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=41.00 E-value=16 Score=26.38 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=28.2
Q ss_pred HHHHHHHHhccCCCccEEEEEcCCC-CCChHHHHHHHHHHhc
Q 037406 30 GALKEGLKRSYVKHCEYVAIFDVDF-RLEPDYLRRAIPYLVQ 70 (162)
Q Consensus 30 gAlN~gl~~a~~~~ge~i~i~DAD~-~~~pd~L~~lv~~f~~ 70 (162)
+++..|++.. .+.++++++|. .+.++.+++++..+..
T Consensus 82 ~si~~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 82 EDLNECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp CCCCTTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 3455555542 58999999998 4689999999999953
No 62
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=36.74 E-value=28 Score=27.62 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=33.5
Q ss_pred CCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHH
Q 037406 13 GINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYL 68 (162)
Q Consensus 13 ~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f 68 (162)
+.++.++..+...| -++++-.|++.. . +.+++++. +|..+.+.-+.+++..+
T Consensus 75 g~~i~~~~~~~~~G-~~~al~~a~~~i-~-~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (296)
T 1mc3_A 75 GIQLEYAEQPSPDG-LAQAFIIGETFL-N-GEPSCLVL-GDNIFFGQGFSPKLRHV 126 (296)
T ss_dssp TCEEEEEECSSCCC-STHHHHHTHHHH-T-TSCEEEEE-TTEEEECSSCHHHHHHH
T ss_pred CceEEEeccCCCCC-HHHHHHHHHHHh-C-CCCEEEEE-CCccccccCHHHHHHHH
Confidence 34566666555556 577888888876 1 24566666 99766444566777766
No 63
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=32.97 E-value=97 Score=23.89 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 2 VEQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 2 i~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
|.++.+.|.+++.++++--.|- .|--+|-+|--|..+ .=.||++.=+| .+-+.| .+-++.+|-|--
T Consensus 65 v~el~~~L~~~G~~V~faIHPV-AGRMPGhMNVLLAEA-~VPYd~v~EMd-----------eIN~df-~~tDv~lVIGAN 130 (207)
T 1djl_A 65 IADLVKMLTEQGKKVRFGIHPV-AGRMPGQLNVLLAEA-GVPYDIVLEMD-----------EINHDF-PDTDLVLVIGAN 130 (207)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT-CSSSTTHHHHHHHHT-TCCGGGEEEHH-----------HHGGGG-GGCSEEEEESCC
T ss_pred HHHHHHHHHHCCCeEEEEeCcc-CCCCCCCCcEEEEEe-CCCHHHHhhHH-----------HHhhhh-hhcCEEEEeccc
Confidence 5788899999999999987763 455777899999988 11244343332 455566 556676666665
Q ss_pred eeecC
Q 037406 82 RFAKE 86 (162)
Q Consensus 82 ~~~N~ 86 (162)
...|+
T Consensus 131 DvVNP 135 (207)
T 1djl_A 131 DTVNS 135 (207)
T ss_dssp GGGCT
T ss_pred cccCC
Confidence 55554
No 64
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=32.46 E-value=1.2e+02 Score=24.27 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=28.3
Q ss_pred EEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCC-hHHHHH
Q 037406 17 RYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLE-PDYLRR 63 (162)
Q Consensus 17 ~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~-pd~L~~ 63 (162)
.++..+...| -++++-.+.... ...++++++.+|.... ++.+.+
T Consensus 76 ~ii~e~~~~g-ta~ai~~a~~~~--~~~~~~lvl~~D~~~~~~~~~~~ 120 (336)
T 2x65_A 76 NIIAEPMKKN-TAPACFIGTKLA--DDDEPVLVLPADHRIPDTKKFWK 120 (336)
T ss_dssp GEEEESSCCC-HHHHHHHHHTTS--CTTCEEEEEETTCBCCCHHHHHH
T ss_pred eEEeCCCCCC-cHHHHHHHHHhh--CCCCEEEEEcCCceeccHHHHHH
Confidence 4455555566 477777776643 2357999999998774 444333
No 65
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.23 E-value=99 Score=23.77 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 2 VEQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 2 i~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
|.++.+.|.+++.++++--.|- .|-.+|-+|--|..+ .=.||++.=+| .+-+.| .+-++.+|-|--
T Consensus 66 v~el~~~L~~~G~~V~faIHPV-AGRMPGhMNVLLAEA-~VPYd~v~EMd-----------eIN~df-~~tDv~lVIGAN 131 (203)
T 2fsv_C 66 LREMADVLKKEGVEVSYAIHPV-AGRMPGHMNVLLAEA-NVPYDEVFELE-----------EINSSF-QTADVAFVIGAN 131 (203)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT-CSSSTTHHHHHHHHT-TCCGGGEEEHH-----------HHGGGS-TTCSEEEEESCC
T ss_pred HHHHHHHHHHcCCeEEEEeccc-ccCCCCCccEEEEEe-cCCHHHHhhHH-----------HHhhhh-hhcCEEEEeccc
Confidence 5788899999999999987763 455778899999988 11244444333 555667 567777777766
Q ss_pred eeecC
Q 037406 82 RFAKE 86 (162)
Q Consensus 82 ~~~N~ 86 (162)
...|+
T Consensus 132 DvVNP 136 (203)
T 2fsv_C 132 DVTNP 136 (203)
T ss_dssp GGGCG
T ss_pred cccCc
Confidence 66664
No 66
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=27.57 E-value=1.3e+02 Score=22.73 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 2 VEQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 2 i~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
|.++.+.|++++.++++--.|- .|--+|-+|--|..+ .=.||++.=+| .+-+.| .+-++.+|-|--
T Consensus 43 v~el~~~L~~~G~~V~faIHPV-AGRMPGhmNVLLAEA-~VPYd~v~EMd-----------eIN~df-~~tDv~lVIGAN 108 (180)
T 1pno_A 43 LREMADVLKKEGVEVSYAIHPV-AGRMPGHMNVLLAEA-NVPYDEVFELE-----------EINSSF-QTADVAFVIGAN 108 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT-CTTSTTHHHHHHHHT-TCCGGGEEEHH-----------HHGGGG-GGCSEEEEESCC
T ss_pred HHHHHHHHHHCCCeEEEEeccc-cccCCCcceEEEEee-CCCHHHHhhHH-----------HHhhhh-hhcCEEEEeccc
Confidence 5788899999999999987763 454677899999988 11345444333 556667 567788877776
Q ss_pred eeecC
Q 037406 82 RFAKE 86 (162)
Q Consensus 82 ~~~N~ 86 (162)
...|+
T Consensus 109 DvvNp 113 (180)
T 1pno_A 109 DVTNP 113 (180)
T ss_dssp GGGCG
T ss_pred cccCc
Confidence 66664
No 67
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=26.80 E-value=1.4e+02 Score=22.63 Aligned_cols=71 Identities=15% Similarity=0.182 Sum_probs=46.9
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCChHHHHHHHHHhccCCCccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEecce
Q 037406 2 VEQECQRWAAKGINIRYESRENRTGYKAGALKEGLKRSYVKHCEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQARW 81 (162)
Q Consensus 2 i~~~v~~l~~~~~~v~~i~~~~~~G~KagAlN~gl~~a~~~~ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~~~ 81 (162)
|.++.+.|++++.++++--.|- .|--+|-+|--|..+ .=.||.+.=+| .+-+.| .+-++.+|-|--
T Consensus 42 v~el~~~L~~~G~~V~faIHPV-AGRMPGhMNVLLAEA-~VPYd~v~EMd-----------eIN~df-~~tDv~lVIGAN 107 (184)
T 1d4o_A 42 IADLVKMLSEQGKKVRFGIHPV-AGRMPGQLNVLLAEA-GVPYDIVLEMD-----------EINHDF-PDTDLVLVIGAN 107 (184)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT-CSSSTTHHHHHHHHH-TCCGGGEEEHH-----------HHGGGG-GGCSEEEEESCS
T ss_pred HHHHHHHHHHCCCeEEEEeccc-cccCCCcceEEEEEe-cCCHHHHHhHH-----------HHhhhh-hhcCEEEEecCC
Confidence 5788899999999999987763 454677899999887 11244443332 455556 556666666655
Q ss_pred eeecC
Q 037406 82 RFAKE 86 (162)
Q Consensus 82 ~~~N~ 86 (162)
...|+
T Consensus 108 DvVNP 112 (184)
T 1d4o_A 108 DTVNS 112 (184)
T ss_dssp GGGCT
T ss_pred ccCCC
Confidence 55554
No 68
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=25.29 E-value=83 Score=18.41 Aligned_cols=19 Identities=26% Similarity=0.672 Sum_probs=13.6
Q ss_pred HHHHHHHhHHHHHHHHHHH
Q 037406 119 QALEELRQTLSRIKQQVFA 137 (162)
Q Consensus 119 gal~~~r~~~~~~~~~~~~ 137 (162)
--|.|+|+++++..+.+--
T Consensus 15 EIL~E~RkElqK~K~EIIe 33 (45)
T 1use_A 15 ELLEEVKKELQKVKEEIIE 33 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4577888888887777433
No 69
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=24.55 E-value=36 Score=26.94 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=24.5
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHH
Q 037406 43 HCEYVAIFDVDFRLEPDYLRRAIPYL 68 (162)
Q Consensus 43 ~ge~i~i~DAD~~~~pd~L~~lv~~f 68 (162)
+.+|+++.|.|+.+..+-|.+++..+
T Consensus 93 ~~~Wf~~~DDDtyv~~~nL~~~L~~~ 118 (280)
T 2j0a_A 93 GLRWFCHVDDDNYVNPKALLQLLKTF 118 (280)
T ss_dssp TCSEEEEEETTEEECHHHHHHHHTTS
T ss_pred CCcEEEEeCCCcEEcHHHHHHHHHhC
Confidence 78999999999999999999999887
No 70
>1s7j_A Phenazine biosynthesis protein PHZF family; bacteria, structural PSI, protein structure initiative; 2.30A {Enterococcus faecalis} SCOP: d.21.1.2
Probab=22.06 E-value=2e+02 Score=22.02 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=33.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHhcCCCeEEEec-----ceeeecCCc
Q 037406 44 CEYVAIFDVDFRLEPDYLRRAIPYLVQNSDIALVQA-----RWRFAKEAK 88 (162)
Q Consensus 44 ge~i~i~DAD~~~~pd~L~~lv~~f~~dp~vg~V~~-----~~~~~N~~~ 88 (162)
-++.+++|++. ++++..+++...+ .-++.++|.. ++++.|+++
T Consensus 19 Np~~Vv~~~~~-l~~~~~q~ia~~~-~~set~fv~~~~~d~~~R~Ftp~~ 66 (262)
T 1s7j_A 19 NPAAVYVLEKW-LPEAVMQNIAIEN-NLSETAFTVKEGQSYALRWFTPER 66 (262)
T ss_dssp EEEEEEECSSC-CCHHHHHHHHHHH-CCSCEEEEEEETTEEEEEEECSSS
T ss_pred CCeEEEECCCC-CCHHHHHHHHHHh-CCCEEEEEEcCCCCEEEEEECCCC
Confidence 47888888874 6788999999998 6788888853 466778764
No 71
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.24 E-value=1.2e+02 Score=22.78 Aligned_cols=50 Identities=16% Similarity=0.088 Sum_probs=26.5
Q ss_pred HHHHHHHhcCCCEEEEEeCC-CCCChH-HHHHHHHHhccCCCccEEEEEcCCCCCC
Q 037406 4 QECQRWAAKGINIRYESREN-RTGYKA-GALKEGLKRSYVKHCEYVAIFDVDFRLE 57 (162)
Q Consensus 4 ~~v~~l~~~~~~v~~i~~~~-~~G~Ka-gAlN~gl~~a~~~~ge~i~i~DAD~~~~ 57 (162)
+..+.+.... ++..+...+ ..| |. -+.|.|...+ ..|.=++++|+|.+-+
T Consensus 9 ~~a~~l~~~~-~vI~v~s~kGGvG-KTT~a~nLA~~la--~~G~~VlliD~D~~~~ 60 (262)
T 2ph1_A 9 EIKERLGKIK-SRIAVMSGKGGVG-KSTVTALLAVHYA--RQGKKVGILDADFLGP 60 (262)
T ss_dssp HHHHHHTTCS-CEEEEECSSSCTT-HHHHHHHHHHHHH--HTTCCEEEEECCSSCC
T ss_pred hhhhhhccCC-eEEEEEcCCCCCC-HHHHHHHHHHHHH--HCCCeEEEEeCCCCCC
Confidence 3445555543 343333322 233 65 3455554443 1466689999998753
Done!