BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037407
         (216 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q67YC9|Y4141_ARATH Uncharacterized protein At4g14100 OS=Arabidopsis thaliana
           GN=At4g14100 PE=2 SV=1
          Length = 206

 Score =  254 bits (649), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 15  LAISFQIFLITSKSTDAA--PVPAPWPPQFHAILFMNNSGTLQKVDLWYDWPNGRNFNII 72
           + I   I++       AA  PVP PWP QFHA++FMN SG L  +DLWYDW NGRNFNII
Sbjct: 8   IVIVIFIYITAGVKIAAADEPVPTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNII 67

Query: 73  QNQLGKLTYDLEWDNGTSYIYTLDANKECRVLHFPVGILRPSWLDGAEYLGQKYVDKFLC 132
           Q QLG +TYDLEW+NGTS+ YTLD +K CR     VGILRP+WLDGA+YLGQ+ V  FLC
Sbjct: 68  QEQLGGITYDLEWNNGTSFFYTLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLC 127

Query: 133 NVWTKVDFIWYYEDVVTKRPVHWAFYTGYTADVITFEVGAVLEDPKWQAPVYCFGNE 189
           NVW KVDFIWYYEDV TKRPV W FYTG  A ++T+EVGAVLED KWQAPVYCF  E
Sbjct: 128 NVWEKVDFIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFNKE 184


>sp|Q4WRD3|BGALB_ASPFU Probable beta-galactosidase B OS=Neosartorya fumigata (strain ATCC
           MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=lacB PE=3
           SV=1
          Length = 1015

 Score = 33.1 bits (74), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 37  PWPPQFHAILFMNNSGTLQKVDLWYDWPNGRNFNIIQNQLGKLTYD-LEWDNG---TSYI 92
           P PP    +L+ +  G    V LW  + NG    +  N  G   +    W NG    S++
Sbjct: 707 PSPPATFPVLYADEYGFHNGVRLWRGYFNGSASGVFLNIQGGSAFGWSAWLNGHFLDSHL 766

Query: 93  YTLDANKECRVLHFPVGILRPS 114
            T   ++  + L FP  IL P+
Sbjct: 767 GTATTSQANKTLTFPSSILNPT 788


>sp|B0XNY2|BGALB_ASPFC Probable beta-galactosidase B OS=Neosartorya fumigata (strain CEA10
           / CBS 144.89 / FGSC A1163) GN=lacB PE=3 SV=1
          Length = 1015

 Score = 33.1 bits (74), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 37  PWPPQFHAILFMNNSGTLQKVDLWYDWPNGRNFNIIQNQLGKLTYD-LEWDNG---TSYI 92
           P PP    +L+ +  G    V LW  + NG    +  N  G   +    W NG    S++
Sbjct: 707 PSPPATFPVLYADEYGFHNGVRLWRGYFNGSASGVFLNIQGGSAFGWSAWLNGHFLDSHL 766

Query: 93  YTLDANKECRVLHFPVGILRPS 114
            T   ++  + L FP  IL P+
Sbjct: 767 GTATTSQANKTLTFPSSILNPT 788


>sp|A9AXP4|DNLJ_HERA2 DNA ligase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
           785) GN=ligA PE=3 SV=1
          Length = 673

 Score = 32.0 bits (71), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 169 EVGAVLEDPKWQAPVYCFGNEGEERPLLNSVVTDSSSGKLI 209
           E+G V  DP+W A  Y F    E   LLN V+    +GKLI
Sbjct: 303 ELGVVGRDPRW-AIAYKFPAREETTTLLNIVINVGRTGKLI 342


>sp|Q750U8|TRM82_ASHGO tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 OS=Ashbya
           gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
           NRRL Y-1056) GN=TRM82 PE=3 SV=1
          Length = 450

 Score = 30.8 bits (68), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 37  PWPPQFHAILFMNNSGTLQKVDLWYD--------WPNGRNFNIIQNQLGKLT-YDLEWDN 87
           P+P + +A+ F ++   L   D + D         P  ++   I   +  LT   L  D 
Sbjct: 155 PFPKRPNAVTFADDDAKLLLADKFGDVYAVDSVGEPEKKDPEPILGHVSMLTDIALVTDT 214

Query: 88  GTSYIYTLDANKECRVLHFPVGILRPSWLDG 118
             SY+ T D ++  ++ H+P   +   WL G
Sbjct: 215 KKSYVITADRDEHIKISHYPQSFVIDKWLFG 245


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.139    0.459 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,551,504
Number of Sequences: 539616
Number of extensions: 3919053
Number of successful extensions: 7016
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7015
Number of HSP's gapped (non-prelim): 6
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)